| Contig-U12293-1 |
| Contig ID |
Contig-U12293-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
974 |
| Chromosome number (1..6, M) |
6 |
| Chromosome length |
3595308 |
| Start point |
2615412 |
| End point |
2616371 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
2 |
| Number of EST |
3 |
| Link to clone list |
U12293 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.30 |
| Homology vs DNA |
Query= Contig-U12293-1 (Contig-U12293-1Q) /CSM_Contig/Contig-U12293-1Q.Seq.d
(984 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ430058) Dictyostelium discoideum cDNA clone:ddv5n22, 3' e... 892 0.0 1
(BJ367500) Dictyostelium discoideum cDNA clone:ddc42o20, 5' ... 182 1e-81 3
(BJ411818) Dictyostelium discoideum cDNA clone:ddv5n22, 5' e... 153 6e-59 3
(CP000413) Lactobacillus gasseri ATCC 33323, complete genome. 42 0.006 2
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 38 0.016 12
(AC016936) Homo sapiens chromosome 3 clone RP11-89J17, WORKI... 40 0.083 4
(AC156369) Felis catus clone RP86-348B19, WORKING DRAFT SEQU... 48 0.095 2
(CT030723) Mouse DNA sequence from clone RP23-33L24 on chrom... 50 0.16 1
(AC164108) Mus musculus BAC clone RP24-96K15 from chromosome... 50 0.16 1
(DD034676) Full length cDNA. 50 0.16 1
(CQ841759) Sequence 406 from Patent EP1440981. 50 0.16 1
(AK123376) Homo sapiens cDNA FLJ41382 fis, clone BRCAN2013655. 50 0.16 1
(CR904388) Sus scrofa BES. 50 0.16 1
(FD700683) CAAA10393.fwd CAAA Petromyzon marinus Petromyzon ... 50 0.16 1
(AP010524) Lotus japonicus genomic DNA, chromosome 5, clone:... 42 0.22 6
(BJ412330) Dictyostelium discoideum cDNA clone:ddv7n24, 5' e... 42 0.42 2
(AF310893) Dictyostelium discoideum RacG (racG) gene, comple... 46 0.49 2
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117... 42 0.55 6
(AL663060) Mouse DNA sequence from clone RP23-239H6 on chrom... 48 0.63 1
(AC154596) Mus musculus BAC clone RP23-354C17 from chromosom... 48 0.63 1
(CU633899) Podospora anserina genomic DNA chromosome 1, supe... 48 0.63 1
(AR546880) Sequence 2011 from patent US 6747137. 48 0.63 1
(AL589642) Human DNA sequence from clone RP11-555J4 on chrom... 48 0.63 1
(AL355811) Human DNA sequence *** SEQUENCING CANCELLED *** f... 48 0.63 1
(AC201043) Strongylocentrotus purpuratus clone R3-12L6, WORK... 48 0.63 1
(AC181229) Strongylocentrotus purpuratus clone R3-115L20, WO... 48 0.63 1
(AC181162) Strongylocentrotus purpuratus clone R3-16C12, WOR... 48 0.63 1
(AC180174) Strongylocentrotus purpuratus clone R3-4001E1, WO... 48 0.63 1
(AC178730) Strongylocentrotus purpuratus clone R3-13D8, WORK... 48 0.63 1
(AC176707) Strongylocentrotus purpuratus clone R3-1111A6, WO... 48 0.63 1
(EJ424553) 1093012255821 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.63 1
(DH485162) Monosiga ovata DNA, fosmid clone: MOF-041G19, gen... 48 0.63 1
(CZ290570) cp70g02.r Candida parapsilosis Random Genomic Lib... 48 0.63 1
(CZ283634) cp30h12.r Candida parapsilosis Random Genomic Lib... 48 0.63 1
(BX313589) AGENAE Rainbow trout multi-tissues - normalized +... 48 0.63 1
(BJ433572) Dictyostelium discoideum cDNA clone:ddv22e12, 3' ... 48 0.63 1
(BJ374904) Dictyostelium discoideum cDNA clone:ddc16a20, 3' ... 48 0.63 1
(FE965487) PLATE_T3_017_B09_30NOV2004_077 Opium poppy elicit... 48 0.63 1
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 34 0.76 8
(BJ363030) Dictyostelium discoideum cDNA clone:ddc24n17, 5' ... 40 1.1 2
(AL929516) Zebrafish DNA sequence from clone CH211-10C20 in ... 32 1.3 2
(BJ336773) Dictyostelium discoideum cDNA clone:dda55h04, 5' ... 40 1.8 2
(AC181486) Strongylocentrotus purpuratus clone R3-1111G12, W... 40 2.0 7
(EJ662678) 1092955029992 Global-Ocean-Sampling_GS-30-02-01-1... 36 2.0 2
(AC127349) Mus musculus BAC clone RP23-62M5 from chromosome ... 38 2.2 7
(EJ649616) 1092953006109 Global-Ocean-Sampling_GS-30-02-01-1... 36 2.3 2
(AP010523) Lotus japonicus genomic DNA, chromosome 5, clone:... 42 2.3 5
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 42 2.3 10
(BX927289) Zebrafish DNA sequence from clone DKEY-119F1 in l... 46 2.5 1
(BX323881) Zebrafish DNA sequence from clone CH211-274G13 in... 46 2.5 1
(AC133175) Mus musculus BAC clone RP24-62B8 from chromosome ... 46 2.5 1
(AC121497) Mus musculus chromosome 6, clone RP23-2M23, compl... 46 2.5 1
(AC115904) Mus musculus chromosome 16, clone RP24-472P22, co... 46 2.5 1
(AC068605) Mus musculus strain C57BL6/J chromosome 6 clone R... 46 2.5 1
(AM427653) Vitis vinifera contig VV78X071330.10, whole genom... 46 2.5 1
(AC156445) Volvox carteri clone JGIAOBO-25P15, complete sequ... 46 2.5 1
(AC122162) Medicago truncatula clone mth2-16g15, complete se... 46 2.5 1
(CS623696) Sequence 247 from Patent WO2006071466. 46 2.5 1
(Z82262) Caenorhabditis elegans Cosmid C43F9. 46 2.5 1
(DQ249437) Daphnia pulex microsatellite Dp1325 sequence. 46 2.5 1
(AC116551) Dictyostelium discoideum chromosome 2 map complem... 46 2.5 1
(AC097520) Homo sapiens BAC clone RP11-562F9 from 4, complet... 46 2.5 1
(AC127846) Rattus norvegicus clone CH230-207G6, WORKING DRAF... 46 2.5 1
(AC126880) Rattus norvegicus clone CH230-263I2, *** SEQUENCI... 46 2.5 1
(AC123453) Rattus norvegicus clone CH230-82E5, WORKING DRAFT... 46 2.5 1
(AC106642) Rattus norvegicus clone CH230-238E2, *** SEQUENCI... 46 2.5 1
(AC097128) Rattus norvegicus clone CH230-94B11, *** SEQUENCI... 46 2.5 1
(AC094061) Rattus norvegicus clone CH230-118I13, WORKING DRA... 46 2.5 1
(CU468390) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.5 1
(CU463070) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.5 1
(AC219142) Monodelphis domestica clone VMRC6-323C18, WORKING... 46 2.5 1
(AC177524) Strongylocentrotus purpuratus clone R3-1027F02, W... 46 2.5 1
(AC176935) Strongylocentrotus purpuratus clone R3-1104F12, W... 46 2.5 1
(AC168657) Strongylocentrotus purpuratus clone R3-3015P5, WO... 46 2.5 1
(AC167317) Sorex araneus clone SA_Ba-55E16, WORKING DRAFT SE... 46 2.5 1
(AZ196494) SP_1032_A1_D07_SP6E Strongylocentrotus purpuratus... 46 2.5 1
(ET040708) MUGQ_CH252P346J15Sp6_CP646_056 CHORI-252 Vervet M... 46 2.5 1
(EK146876) 1095456026149 Global-Ocean-Sampling_GS-31-01-01-1... 46 2.5 1
(DU919907) 339754 Tomato EcoRI BAC Library Solanum lycopersi... 46 2.5 1
(AL440500) T3 end of clone BD0AA012H02 of library BD0AA from... 46 2.5 1
(DE880668) Macropus eugenii DNA, BAC clone: MEB1-053M02_R, 3... 46 2.5 1
(CU852431) A BAC library has been constructed from PN40024 g... 46 2.5 1
(BZ131427) CH230-394B9.TV CHORI-230 Segment 2 Rattus norvegi... 46 2.5 1
(BZ129667) CH230-394A10.TV CHORI-230 Segment 2 Rattus norveg... 46 2.5 1
(AU268139) Dictyostelium discoideum vegetative cDNA clone:VS... 46 2.5 1
(DB857880) Nilaparvata lugens mRNA, EST clone:NLSG4514, 5' e... 46 2.5 1
(DB857094) Nilaparvata lugens mRNA, EST clone:NLSG3097, 5' e... 46 2.5 1
(DB856528) Nilaparvata lugens mRNA, EST clone:NLSG1955, 5' e... 46 2.5 1
(DB856484) Nilaparvata lugens mRNA, EST clone:NLSG1852, 5' e... 46 2.5 1
(DB856379) Nilaparvata lugens mRNA, EST clone:NLSG1664, 5' e... 46 2.5 1
(DB855918) Nilaparvata lugens mRNA, EST clone:NLSG0443, 5' e... 46 2.5 1
(DB855852) Nilaparvata lugens mRNA, EST clone:NLSG0307, 5' e... 46 2.5 1
(DB855719) Nilaparvata lugens mRNA, EST clone:NLSG0041, 5' e... 46 2.5 1
(DB854324) Nilaparvata lugens mRNA, EST clone:NLNA6492, 5' e... 46 2.5 1
(C94449) Dictyostelium discoideum slug cDNA, clone SSK818. 46 2.5 1
(EY360630) CAWZ7279.fwd CAWZ Helobdella robusta Primary Late... 46 2.5 1
(EY345660) CAWZ14177.fwd CAWZ Helobdella robusta Primary Lat... 46 2.5 1
(EY316759) CAWX26804.fwd CAWX Helobdella robusta Primary Ear... 46 2.5 1
(EY301514) CAWX15622.rev CAWX Helobdella robusta Primary Ear... 46 2.5 1
(CP000382) Clostridium novyi NT, complete genome. 46 2.5 1
>(BJ430058) Dictyostelium discoideum cDNA clone:ddv5n22, 3' end,
single read.
Length = 454
Score = 892 bits (450), Expect = 0.0
Identities = 453/453 (100%)
Strand = Plus / Minus
Query: 532 cagatgccgttatagattcaattaataatgcaaaattaaataaaattgataatgctgaat 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cagatgccgttatagattcaattaataatgcaaaattaaataaaattgataatgctgaat 395
Query: 592 atttagttggtaaagcagaagatacattaccaacattacttacaaaatctaatggtggta 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 atttagttggtaaagcagaagatacattaccaacattacttacaaaatctaatggtggta 335
Query: 652 aagaccaagagttcattggtatcgttgatccaccaaggggtggacttcatggtgatgtct 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aagaccaagagttcattggtatcgttgatccaccaaggggtggacttcatggtgatgtct 275
Query: 712 taaaagcaattcgtacatttgaaccaattaaaaaattagtttacgtttcttgtaatcaaa 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 taaaagcaattcgtacatttgaaccaattaaaaaattagtttacgtttcttgtaatcaaa 215
Query: 772 attcactcattccctgatgccgcaaaattatgtaaaggtatttcaaaaacaatgaaaggc 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 attcactcattccctgatgccgcaaaattatgtaaaggtatttcaaaaacaatgaaaggc 155
Query: 832 acccctttcgtaccaacaaaagcaattgcttttgatcttttccctcatacagatttagtt 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 acccctttcgtaccaacaaaagcaattgcttttgatcttttccctcatacagatttagtt 95
Query: 892 gaattggttgttttatttgaaagagttgaaaataatactactaccacaaccaccaccaca 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 gaattggttgttttatttgaaagagttgaaaataatactactaccacaaccaccaccaca 35
Query: 952 acaaattcagataataatttaataatncaagaa 984
|||||||||||||||||||||||||||||||||
Sbjct: 34 acaaattcagataataatttaataatncaagaa 2
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 863,637,052
Number of extensions: 55195127
Number of successful extensions: 5120757
Number of sequences better than 10.0: 312
Length of query: 984
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 960
Effective length of database: 97,308,875,965
Effective search space: 93416520926400
Effective search space used: 93416520926400
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 2 |
| Homology vs Protein |
Query= Contig-U12293-1 (Contig-U12293-1Q) /CSM_Contig/Contig-U12293-1Q.Seq.d
(984 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC083619_1(BC083619|pid:none) Rattus norvegicus TRM2 tRNA methyl... 72 4e-17
AK146391_1(AK146391|pid:none) Mus musculus TIB-55 BB88 cDNA, RIK... 70 1e-16
AK133844_1(AK133844|pid:none) Mus musculus 8 days embryo whole b... 70 1e-16
BC027431_1(BC027431|pid:none) Mus musculus TRM2 tRNA methyltrans... 70 1e-16
BC045367_1(BC045367|pid:none) Danio rerio trm2 tRNA methyltransf... 75 7e-16
(Q8IZ69) RecName: Full=tRNA (uracil-5-)-methyltransferase homolo... 70 9e-16
BT044194_1(BT044194|pid:none) Drosophila melanogaster FI05218 fu... 69 6e-15
AY061614_1(AY061614|pid:none) Drosophila melanogaster SD08036 fu... 69 6e-15
CP000581_422(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 64 5e-13
AM502238_164(AM502238|pid:none) Leishmania infantum chromosome 20. 62 6e-13
BC161232_1(BC161232|pid:none) Xenopus tropicalis hypothetical pr... 77 7e-13
FN357295_29(FN357295|pid:none) Schistosoma mansoni genome sequen... 63 8e-13
(A4QP75) RecName: Full=tRNA (uracil-5-)-methyltransferase homolo... 63 5e-11
AK315780_1(AK315780|pid:none) Homo sapiens cDNA, FLJ96896. 60 7e-11
AL109952_1(AL109952|pid:none) Human DNA sequence from clone RP4-... 60 7e-11
AC006663_2(AC006663|pid:none) Caenorhabditis elegans fosmid H24K... 66 1e-10
CP001078_2997(CP001078|pid:none) Clostridium botulinum E3 str. A... 69 2e-10
AL832849_1(AL832849|pid:none) Homo sapiens mRNA; cDNA DKFZp667H0... 57 1e-09
CP001581_3595(CP001581|pid:none) Clostridium botulinum A2 str. K... 66 2e-09
AM412317_3374(AM412317|pid:none) Clostridium botulinum A str. AT... 65 3e-09
CP000728_3355(CP000728|pid:none) Clostridium botulinum F str. La... 65 3e-09
AP009389_1518(AP009389|pid:none) Pelotomaculum thermopropionicum... 65 4e-09
CP001056_3251(CP001056|pid:none) Clostridium botulinum B str. Ek... 65 4e-09
AM180355_3482(AM180355|pid:none) Clostridium difficile 630 compl... 64 6e-09
CP000939_3379(CP000939|pid:none) Clostridium botulinum B1 str. O... 64 6e-09
CP000724_3899(CP000724|pid:none) Alkaliphilus metalliredigens QY... 64 8e-09
A84685(A84685) probable RNA methyltransferase [imported] - Arabi... 53 1e-08
(Q8L7S3) RecName: Full=Zinc finger CCCH domain-containing protei... 53 1e-08
AK028999_1(AK028999|pid:none) Mus musculus 10 days neonate skin ... 54 1e-08
(Q837V0) RecName: Full=Uncharacterized RNA methyltransferase EF_... 63 1e-08
AL929603_297(AL929603|pid:none) Trypanosoma brucei chromosome 1,... 62 2e-08
CP000721_4766(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 62 2e-08
CR936503_1546(CR936503|pid:none) Lactobacillus sakei strain 23K ... 61 5e-08
CP000033_510(CP000033|pid:none) Lactobacillus acidophilus NCFM, ... 61 5e-08
CR936503_1476(CR936503|pid:none) Lactobacillus sakei strain 23K ... 60 9e-08
AL133275_3(AL133275|pid:none) Human DNA sequence from clone RP5-... 60 9e-08
CP000413_1432(CP000413|pid:none) Lactobacillus gasseri ATCC 3332... 60 9e-08
AP007281_84(AP007281|pid:none) Lactobacillus reuteri JCM 1112 DN... 60 9e-08
CP000517_1522(CP000517|pid:none) Lactobacillus helveticus DPC 45... 60 1e-07
CP000419_316(CP000419|pid:none) Streptococcus thermophilus LMD-9... 60 1e-07
CP000024_360(CP000024|pid:none) Streptococcus thermophilus CNRZ1... 60 1e-07
CP001322_4830(CP001322|pid:none) Desulfatibacillum alkenivorans ... 60 1e-07
AP006627_1096(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 59 2e-07
(Q8P017) RecName: Full=Uncharacterized RNA methyltransferase spy... 59 2e-07
CP000262_1428(CP000262|pid:none) Streptococcus pyogenes MGAS1075... 59 2e-07
CP000829_1166(CP000829|pid:none) Streptococcus pyogenes NZ131, c... 59 2e-07
CP000259_1312(CP000259|pid:none) Streptococcus pyogenes MGAS9429... 59 2e-07
CP000923_1167(CP000923|pid:none) Thermoanaerobacter sp. X514, co... 59 3e-07
CP000924_676(CP000924|pid:none) Thermoanaerobacter pseudethanoli... 59 3e-07
(Q5XAU1) RecName: Full=Uncharacterized RNA methyltransferase M6_... 59 3e-07
CP000930_2867(CP000930|pid:none) Heliobacterium modesticaldum Ic... 59 3e-07
CP001616_2595(CP001616|pid:none) Tolumonas auensis DSM 9187, com... 59 3e-07
AM910991_315(AM910991|pid:none) Plasmodium knowlesi strain H chr... 58 4e-07
CP000232_1871(CP000232|pid:none) Moorella thermoacetica ATCC 390... 58 4e-07
CP000859_1579(CP000859|pid:none) Desulfococcus oleovorans Hxd3, ... 58 4e-07
AM180355_413(AM180355|pid:none) Clostridium difficile 630 comple... 57 7e-07
AM263198_1723(AM263198|pid:none) Listeria welshimeri serovar 6b ... 57 7e-07
(Q8ES75) RecName: Full=Uncharacterized RNA methyltransferase OB0... 57 7e-07
AM398681_718(AM398681|pid:none) Flavobacterium psychrophilum JIP... 57 1e-06
(Q92AV4) RecName: Full=Uncharacterized RNA methyltransferase lin... 57 1e-06
(Q9KEF5) RecName: Full=Uncharacterized RNA methyltransferase BH0... 57 1e-06
(Q71YW4) RecName: Full=Uncharacterized RNA methyltransferase LMO... 57 1e-06
(Q8AA22) RecName: Full=Uncharacterized RNA methyltransferase BT_... 57 1e-06
CP000033_601(CP000033|pid:none) Lactobacillus acidophilus NCFM, ... 57 1e-06
CP000423_1680(CP000423|pid:none) Lactobacillus casei ATCC 334, c... 57 1e-06
CP001107_2830(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 57 1e-06
FM177140_1940(FM177140|pid:none) Lactobacillus casei BL23 comple... 57 1e-06
CP000416_1980(CP000416|pid:none) Lactobacillus brevis ATCC 367, ... 56 2e-06
CP000412_445(CP000412|pid:none) Lactobacillus delbrueckii subsp.... 56 2e-06
(Q99YP3) RecName: Full=Uncharacterized RNA methyltransferase SPy... 56 2e-06
CP000517_533(CP000517|pid:none) Lactobacillus helveticus DPC 457... 56 2e-06
CP000413_1316(CP000413|pid:none) Lactobacillus gasseri ATCC 3332... 56 2e-06
CP000312_326(CP000312|pid:none) Clostridium perfringens SM101, c... 55 3e-06
AP008937_57(AP008937|pid:none) Lactobacillus fermentum IFO 3956 ... 55 3e-06
AP008955_992(AP008955|pid:none) Brevibacillus brevis NBRC 100599... 55 3e-06
(Q8Y6I1) RecName: Full=Uncharacterized RNA methyltransferase lmo... 55 3e-06
CP001175_844(CP001175|pid:none) Listeria monocytogenes HCC23, co... 55 3e-06
(Q97LN4) RecName: Full=Uncharacterized RNA methyltransferase CA_... 55 3e-06
CP000879_399(CP000879|pid:none) Petrotoga mobilis SJ95, complete... 55 3e-06
(Q8XNG6) RecName: Full=Uncharacterized RNA methyltransferase CPE... 55 3e-06
(Q8R918) RecName: Full=Uncharacterized RNA methyltransferase TTE... 55 4e-06
CP000139_3253(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 55 4e-06
CP001022_2468(CP001022|pid:none) Exiguobacterium sibiricum 255-1... 55 4e-06
FN392321_606(FN392321|pid:none) Pichia pastoris GS115 chromosome... 55 4e-06
CP000141_1086(CP000141|pid:none) Carboxydothermus hydrogenoforma... 55 4e-06
(Q88SY9) RecName: Full=Uncharacterized RNA methyltransferase lp_... 55 5e-06
CP000246_339(CP000246|pid:none) Clostridium perfringens ATCC 131... 55 5e-06
CP001056_531(CP001056|pid:none) Clostridium botulinum B str. Ekl... 55 5e-06
CP001102_5(CP001102|pid:none) Candidatus Amoebophilus asiaticus ... 54 5e-06
CP001078_508(CP001078|pid:none) Clostridium botulinum E3 str. Al... 54 6e-06
CP001251_647(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, ... 54 6e-06
CP001098_298(CP001098|pid:none) Halothermothrix orenii H 168, co... 54 6e-06
AP009484_1631(AP009484|pid:none) Macrococcus caseolyticus JCSC54... 54 6e-06
AP006841_2539(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 54 6e-06
CP000140_1001(CP000140|pid:none) Parabacteroides distasonis ATCC... 54 8e-06
CP001104_1793(CP001104|pid:none) Eubacterium eligens ATCC 27750,... 54 8e-06
CP000922_331(CP000922|pid:none) Anoxybacillus flavithermus WK1, ... 53 8e-06
CP000726_2716(CP000726|pid:none) Clostridium botulinum A str. AT... 54 1e-05
CP001175_798(CP001175|pid:none) Listeria monocytogenes HCC23, co... 54 1e-05
AM406671_2419(AM406671|pid:none) Lactococcus lactis subsp. cremo... 54 1e-05
CP001581_3071(CP001581|pid:none) Clostridium botulinum A2 str. K... 54 1e-05
CP000685_2489(CP000685|pid:none) Flavobacterium johnsoniae UW101... 53 1e-05
(Q8R933) RecName: Full=Uncharacterized RNA methyltransferase TTE... 53 1e-05
CP000462_3567(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 53 1e-05
CP000382_1512(CP000382|pid:none) Clostridium novyi NT, complete ... 53 1e-05
(Q891A0) RecName: Full=Uncharacterized RNA methyltransferase CTC... 53 1e-05
AP008937_1469(AP008937|pid:none) Lactobacillus fermentum IFO 395... 53 2e-05
DQ489736_1332(DQ489736|pid:none) Leuconostoc citreum KM20, compl... 53 2e-05
CP000903_403(CP000903|pid:none) Bacillus weihenstephanensis KBAB... 53 2e-05
CP000764_298(CP000764|pid:none) Bacillus cereus subsp. cytotoxis... 52 2e-05
CP001615_983(CP001615|pid:none) Exiguobacterium sp. AT1b, comple... 52 2e-05
CP000227_458(CP000227|pid:none) Bacillus cereus Q1, complete gen... 52 2e-05
CP000383_2480(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 52 2e-05
CP001186_403(CP001186|pid:none) Bacillus cereus G9842, complete ... 52 2e-05
(Q73E18) RecName: Full=Uncharacterized RNA methyltransferase BCE... 52 2e-05
AE017355_394(AE017355|pid:none) Bacillus thuringiensis serovar k... 52 2e-05
CP001393_421(CP001393|pid:none) Anaerocellum thermophilum DSM 67... 52 3e-05
(Q8Y6D6) RecName: Full=Uncharacterized RNA methyltransferase lmo... 52 3e-05
CP001177_444(CP001177|pid:none) Bacillus cereus AH187, complete ... 52 3e-05
CP000422_1642(CP000422|pid:none) Pediococcus pentosaceus ATCC 25... 52 3e-05
AP008934_894(AP008934|pid:none) Staphylococcus saprophyticus sub... 52 3e-05
(Q7MVG9) RecName: Full=Uncharacterized RNA methyltransferase PG_... 52 3e-05
CP000407_435(CP000407|pid:none) Streptococcus suis 05ZYH33, comp... 52 3e-05
AM263198_1768(AM263198|pid:none) Listeria welshimeri serovar 6b ... 52 4e-05
CP001015_1771(CP001015|pid:none) Streptococcus pneumoniae G54, c... 52 4e-05
(O31503) RecName: Full=Uncharacterized RNA methyltransferase yef... 52 4e-05
CP000560_761(CP000560|pid:none) Bacillus amyloliquefaciens FZB42... 52 4e-05
AP009049_2368(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 52 4e-05
CP001197_1369(CP001197|pid:none) Desulfovibrio vulgaris str. 'Mi... 52 4e-05
(Q5HEM5) RecName: Full=Uncharacterized RNA methyltransferase SAC... 52 4e-05
CP000478_286(CP000478|pid:none) Syntrophobacter fumaroxidans MPO... 50 5e-05
CP000387_1384(CP000387|pid:none) Streptococcus sanguinis SK36, c... 51 5e-05
(Q92AQ7) RecName: Full=Uncharacterized RNA methyltransferase lin... 51 5e-05
CP000422_1293(CP000422|pid:none) Pediococcus pentosaceus ATCC 25... 51 5e-05
CU466930_1088(CU466930|pid:none) Candidatus Cloacamonas acidamin... 51 5e-05
CR382132_842(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 51 7e-05
CP000233_359(CP000233|pid:none) Lactobacillus salivarius UCC118,... 51 7e-05
CP000246_2318(CP000246|pid:none) Clostridium perfringens ATCC 13... 51 7e-05
(O31545) RecName: Full=Uncharacterized RNA methyltransferase yfj... 51 7e-05
CP000312_2040(CP000312|pid:none) Clostridium perfringens SM101, ... 51 7e-05
AP008955_709(AP008955|pid:none) Brevibacillus brevis NBRC 100599... 51 7e-05
CP000414_125(CP000414|pid:none) Leuconostoc mesenteroides subsp.... 50 9e-05
CP000853_714(CP000853|pid:none) Alkaliphilus oremlandii OhILAs, ... 50 9e-05
(Q7A4Q9) RecName: Full=Uncharacterized RNA methyltransferase SA1... 50 9e-05
AJ250970_1(AJ250970|pid:none) Saccharomyces cerevisiae TRM2 gene... 50 1e-04
CP000813_739(CP000813|pid:none) Bacillus pumilus SAFR-032, compl... 50 1e-04
FM992688_126(FM992688|pid:none) Candida dubliniensis CD36 chromo... 50 1e-04
CP000423_989(CP000423|pid:none) Lactobacillus casei ATCC 334, co... 50 2e-04
BA000043_342(BA000043|pid:none) Geobacillus kaustophilus HTA426 ... 50 2e-04
CP000387_1741(CP000387|pid:none) Streptococcus sanguinis SK36, c... 50 2e-04
CP000411_1518(CP000411|pid:none) Oenococcus oeni PSU-1, complete... 50 2e-04
CP000777_90(CP000777|pid:none) Leptospira biflexa serovar Patoc ... 50 2e-04
(Q9KF10) RecName: Full=Uncharacterized RNA methyltransferase BH0... 50 2e-04
CP000557_295(CP000557|pid:none) Geobacillus thermodenitrificans ... 50 2e-04
DQ489736_363(DQ489736|pid:none) Leuconostoc citreum KM20, comple... 50 2e-04
CP000485_303(CP000485|pid:none) Bacillus thuringiensis str. Al H... 49 2e-04
CP000903_310(CP000903|pid:none) Bacillus weihenstephanensis KBAB... 49 2e-04
(Q8E6W1) RecName: Full=Uncharacterized RNA methyltransferase gbs... 49 2e-04
(Q73EJ5) RecName: Full=Uncharacterized RNA methyltransferase BCE... 49 2e-04
CP000227_326(CP000227|pid:none) Bacillus cereus Q1, complete gen... 49 2e-04
(Q81ZD6) RecName: Full=Uncharacterized RNA methyltransferase BA_... 49 2e-04
CP000001_295(CP000001|pid:none) Bacillus cereus E33L, complete g... 49 2e-04
CP001283_317(CP001283|pid:none) Bacillus cereus AH820, complete ... 49 2e-04
CP000407_595(CP000407|pid:none) Streptococcus suis 05ZYH33, comp... 49 3e-04
CP000114_405(CP000114|pid:none) Streptococcus agalactiae A909, c... 49 3e-04
(Q09833) RecName: Full=Uncharacterized RNA methyltransferase C4G... 49 3e-04
(Q892Z2) RecName: Full=Uncharacterized RNA methyltransferase CTC... 49 3e-04
CR380957_356(CR380957|pid:none) Candida glabrata strain CBS138 c... 48 5e-04
CP000896_543(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 48 5e-04
(Q5HN37) RecName: Full=Uncharacterized RNA methyltransferase SER... 48 6e-04
CP000023_628(CP000023|pid:none) Streptococcus thermophilus LMG 1... 47 8e-04
(Q814A6) RecName: Full=Uncharacterized RNA methyltransferase BC_... 47 8e-04
CP000686_341(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 47 8e-04
CP000419_565(CP000419|pid:none) Streptococcus thermophilus LMD-9... 47 8e-04
CP001176_307(CP001176|pid:none) Bacillus cereus B4264, complete ... 47 8e-04
CP001186_300(CP001186|pid:none) Bacillus cereus G9842, complete ... 47 8e-04
AE016816_460(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 47 0.001
CP001037_811(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 47 0.001
CP000416_1526(CP000416|pid:none) Lactobacillus brevis ATCC 367, ... 47 0.001
CP000024_630(CP000024|pid:none) Streptococcus thermophilus CNRZ1... 47 0.001
(Q88XP4) RecName: Full=Uncharacterized RNA methyltransferase lp_... 47 0.001
CP000896_483(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 47 0.001
CP001129_679(CP001129|pid:none) Streptococcus equi subsp. zooepi... 47 0.001
CU928170_236(CU928170|pid:none) Kluyveromyces thermotolerans str... 47 0.001
CP000817_222(CP000817|pid:none) Lysinibacillus sphaericus C3-41,... 46 0.002
AE017350_311(AE017350|pid:none) Cryptococcus neoformans var. neo... 42 0.002
CP001080_225(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1... 46 0.002
CP000142_2530(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 46 0.002
FM204884_1309(FM204884|pid:none) Streptococcus equi subsp. zooep... 46 0.002
CP000096_2076(CP000096|pid:none) Pelodictyon luteolum DSM 273, c... 46 0.002
CP001108_2257(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 46 0.002
CR382136_655(CR382136|pid:none) Debaryomyces hansenii strain CBS... 46 0.002
CP000875_611(CP000875|pid:none) Herpetosiphon aurantiacus ATCC 2... 45 0.003
CP000252_1130(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 45 0.004
AP009510_518(AP009510|pid:none) Uncultured Termite group 1 bacte... 45 0.004
CP000472_200(CP000472|pid:none) Shewanella piezotolerans WP3, co... 45 0.004
AP006627_1295(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 45 0.004
CU928176_126(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 45 0.004
CP001033_1007(CP001033|pid:none) Streptococcus pneumoniae CGSP14... 45 0.005
AM920436_642(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 45 0.005
CP001110_2693(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 45 0.005
AX461024_1(AX461024|pid:none) Sequence 13 from Patent WO0222823. 45 0.005
CP000896_416(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 45 0.005
FM211187_909(FM211187|pid:none) Streptococcus pneumoniae ATCC 70... 45 0.005
(B0TMV6) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 45 0.005
GM016639_23(GM016639|pid:none) Sequence 1469 from Patent EP19234... 43 0.005
AP006878_2136(AP006878|pid:none) Thermococcus kodakarensis KOD1 ... 43 0.005
CU179680_666(CU179680|pid:none) Mycoplasma agalactiae PG2 chromo... 44 0.007
(A7ZDV3) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 44 0.009
CP000920_948(CP000920|pid:none) Streptococcus pneumoniae P1031, ... 44 0.011
(Q8DPY7) RecName: Full=Uncharacterized RNA methyltransferase spr... 44 0.011
(Q8DUV4) RecName: Full=Uncharacterized RNA methyltransferase SMU... 44 0.011
CP000919_918(CP000919|pid:none) Streptococcus pneumoniae JJA, co... 44 0.011
CP000918_1010(CP000918|pid:none) Streptococcus pneumoniae 70585,... 44 0.011
CP000936_1038(CP000936|pid:none) Streptococcus pneumoniae Hungar... 44 0.011
CP000855_1518(CP000855|pid:none) Thermococcus onnurineus NA1, co... 42 0.011
CP000350_575(CP000350|pid:none) Leptospira borgpetersenii serova... 42 0.011
(A0RPL1) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 43 0.015
AM946015_1164(AM946015|pid:none) Streptococcus uberis 0140J comp... 43 0.019
AM270402_3(AM270402|pid:none) Aspergillus niger contig An18c0100... 43 0.019
(A3Q962) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 43 0.019
CP000259_1141(CP000259|pid:none) Streptococcus pyogenes MGAS9429... 43 0.019
CP000056_1088(CP000056|pid:none) Streptococcus pyogenes MGAS6180... 42 0.025
AE014074_1024(AE014074|pid:none) Streptococcus pyogenes MGAS315,... 42 0.025
CP000829_1005(CP000829|pid:none) Streptococcus pyogenes NZ131, c... 42 0.025
CP000262_1197(CP000262|pid:none) Streptococcus pyogenes MGAS1075... 42 0.025
(Q8P0H4) RecName: Full=Uncharacterized RNA methyltransferase spy... 42 0.032
CR954201_172(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 42 0.032
AM295007_747(AM295007|pid:none) Streptococcus pyogenes Manfredo ... 42 0.032
CP000017_1097(CP000017|pid:none) Streptococcus pyogenes MGAS5005... 42 0.032
CP001147_1347(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 42 0.042
(Q9X0H9) RecName: Full=Uncharacterized RNA methyltransferase TM_... 42 0.042
CP001101_2463(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 41 0.055
(Q74D67) RecName: Full=Uncharacterized RNA methyltransferase GSU... 41 0.055
CP000557_313(CP000557|pid:none) Geobacillus thermodenitrificans ... 41 0.055
CP001390_2373(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 41 0.072
CP000815_32(CP000815|pid:none) Paulinella chromatophora chromato... 41 0.072
CP000916_1474(CP000916|pid:none) Thermotoga neapolitana DSM 4359... 41 0.072
CP001097_2428(CP001097|pid:none) Chlorobium limicola DSM 245, co... 41 0.072
(A9L1I5) RecName: Full=23S rRNA (uracil-5-)-methyltransferase ru... 34 0.088
CP000828_5141(CP000828|pid:none) Acaryochloris marina MBIC11017,... 40 0.094
AE017340_2261(AE017340|pid:none) Idiomarina loihiensis L2TR, com... 40 0.094
CP000527_2052(CP000527|pid:none) Desulfovibrio vulgaris subsp. v... 40 0.094
(Q5QVT1) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 40 0.094
(Q12SP8) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 40 0.094
BA000043_357(BA000043|pid:none) Geobacillus kaustophilus HTA426 ... 40 0.12
CP001275_213(CP001275|pid:none) Thermomicrobium roseum DSM 5159,... 40 0.12
CP000492_2644(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 40 0.12
CP001099_2039(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 40 0.12
CR848038_832(CR848038|pid:none) Chlamydophila abortus strain S26... 40 0.12
(Q8KGF9) RecName: Full=Uncharacterized RNA methyltransferase CT0... 40 0.12
CP000863_1572(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 40 0.12
CP001104_1501(CP001104|pid:none) Eubacterium eligens ATCC 27750,... 40 0.16
DQ889942_5(DQ889942|pid:none) Candidatus Endobugula sertula isol... 40 0.16
(A8EWU8) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 40 0.16
CP000969_1693(CP000969|pid:none) Thermotoga sp. RQ2, complete ge... 39 0.21
AE014299_967(AE014299|pid:none) Shewanella oneidensis MR-1, comp... 35 0.24
EF667148_1(EF667148|pid:none) Arcobacter nitrofigilis hypothetic... 39 0.27
(Q089S7) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 39 0.27
CP000688_935(CP000688|pid:none) Dehalococcoides sp. BAV1, comple... 39 0.27
CP001034_464(CP001034|pid:none) Natranaerobius thermophilus JW/N... 39 0.27
CP000702_1625(CP000702|pid:none) Thermotoga petrophila RKU-1, co... 39 0.36
(A7MXY6) tRNA (uracil-5-)-methyltransferase (EC 2.1.1.35) (tRNA(... 39 0.36
CP000909_1206(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 39 0.36
(Q821Q5) RecName: Full=Uncharacterized RNA methyltransferase CCA... 38 0.47
CP000771_332(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 38 0.47
CP001124_2038(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 38 0.47
CP000142_1669(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 36 0.52
(Q65PY6) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 38 0.61
CP000521_1659(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 38 0.61
CP000776_1301(CP000776|pid:none) Campylobacter hominis ATCC BAA-... 38 0.61
AP010904_776(AP010904|pid:none) Desulfovibrio magneticus RS-1 DN... 38 0.61
CP000502_246(CP000502|pid:none) Pichia stipitis CBS 6054 chromos... 38 0.61
AL356173_35(AL356173|pid:none) Neurospora crassa DNA linkage gro... 38 0.61
AP008971_1296(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA... 38 0.61
(A4XQI3) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 37 0.80
(B0KHR5) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 37 0.80
(Q48A12) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 37 0.80
CP000896_487(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 37 0.80
(P58106) RecName: Full=Uncharacterized RNA methyltransferase TC_... 37 0.80
CP001172_1911(CP001172|pid:none) Acinetobacter baumannii AB307-0... 37 1.0
CU459141_1991(CU459141|pid:none) Acinetobacter baumannii str. AY... 37 1.0
(A3DA80) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 37 1.0
CP001071_836(CP001071|pid:none) Akkermansia muciniphila ATCC BAA... 37 1.0
(A6WHQ8) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 37 1.0
(A4Y9Y4) RecName: Full=23S rRNA (uracil-5-)-methyltransferase ru... 30 1.1
(A3QB25) RecName: Full=23S rRNA (uracil-5-)-methyltransferase ru... 31 1.1
(Q6FBS0) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 37 1.4
(A5F5I8) RecName: Full=23S rRNA (uracil-5-)-methyltransferase ru... 37 1.4
(P31812) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 37 1.4
(Q8CX51) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 37 1.4
CP001616_376(CP001616|pid:none) Tolumonas auensis DSM 9187, comp... 36 1.8
S37744(S37744;S38132;S26075;S36618) endo-exonuclease yNucR - yea... 36 1.8
CP000436_310(CP000436|pid:none) Haemophilus somnus 129PT, comple... 36 1.8
FM954972_2813(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 36 1.8
(Q88E14) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 36 1.8
(Q4K5P2) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 36 1.8
(Q7MQ79) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 36 1.8
(Q0I1I7) tRNA (uracil-5-)-methyltransferase (EC 2.1.1.35) (tRNA(... 36 1.8
(Q8DD43) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 36 1.8
BX538353_34(BX538353|pid:none) Cryptosporidium parvum chromosome... 36 1.8
(Q9RHS9) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 36 1.8
(Q1I4J8) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 36 2.3
(Q0I0C6) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 36 2.3
(Q87WA0) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 36 2.3
(A6W3C7) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 36 2.3
(A6VLF9) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 36 2.3
CP000581_177(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 36 2.3
(Q5F757) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 36 2.3
(Q9JT82) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 36 2.3
(A1RGE6) RecName: Full=23S rRNA (uracil-5-)-methyltransferase ru... 29 2.4
CP000851_3617(CP000851|pid:none) Shewanella pealeana ATCC 700345... 32 2.4
CP001032_851(CP001032|pid:none) Opitutus terrae PB90-1, complete... 35 3.0
CP000777_3259(CP000777|pid:none) Leptospira biflexa serovar Pato... 35 3.0
CP000381_1515(CP000381|pid:none) Neisseria meningitidis 053442, ... 35 3.0
CP000680_1723(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 35 3.9
FM954972_2476(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 35 3.9
(Q4ZNF5) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 35 3.9
CP000932_924(CP000932|pid:none) Campylobacter lari RM2100, compl... 35 3.9
(Q3K6G9) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 35 3.9
(Q47F12) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 35 3.9
(Q48DT0) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 35 3.9
CP000448_2157(CP000448|pid:none) Syntrophomonas wolfei subsp. wo... 35 3.9
CP000507_192(CP000507|pid:none) Shewanella amazonensis SB2B, com... 35 3.9
AM920689_3061(AM920689|pid:none) Xanthomonas campestris pv. camp... 35 5.2
CR954203_258(CR954203|pid:none) Ostreococcus tauri strain OTTH05... 35 5.2
(Q02FV3) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 35 5.2
(Q4USG1) RecName: Full=23S rRNA (uracil-5-)-methyltransferase ru... 35 5.2
CP000583_262(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 35 5.2
AF175295_1(AF175295|pid:none) Vibrio cholerae RNA methyltransfer... 35 5.2
AM181176_4410(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 35 5.2
CU468135_143(CU468135|pid:none) Erwinia tasmaniensis strain ET1/... 35 5.2
(B7V1D2) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 35 5.2
(A8FLP0) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 34 6.7
(B6ENT4) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 34 6.7
(Q9CK32) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 34 6.7
(Q1QXW4) tRNA (uracil-5-)-methyltransferase (EC 2.1.1.35) (tRNA(... 34 6.7
(A7H422) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 34 6.7
AM180252_575(AM180252|pid:none) Lawsonia intracellularis PHE/MN1... 34 6.7
CP001614_1444(CP001614|pid:none) Teredinibacter turnerae T7901, ... 34 6.7
(A4VI15) RecName: Full=tRNA (uracil-5-)-methyltransferase; ... 34 6.7
(Q9UZK1) RecName: Full=Uncharacterized RNA methyltransferase PYR... 34 8.8
>BC083619_1(BC083619|pid:none) Rattus norvegicus TRM2 tRNA
methyltransferase 2 homolog A (S. cerevisiae), mRNA
(cDNA clone MGC:94388 IMAGE:7133938), complete cds.
Length = 615
Score = 72.0 bits (175), Expect(2) = 4e-17
Identities = 35/78 (44%), Positives = 53/78 (67%)
Frame = +3
Query: 534 DAVIDSINNAKLNKIDNAEYLVGKAEDTLPTLLTKSNGGKDQEFIGIVDPPRGGLHGDVL 713
+AV D+ NA N++ N E+ G+AED +P L++K + Q+ + ++DPPR GLH V+
Sbjct: 456 EAVEDARMNALTNELSNVEFHCGRAEDLVPGLVSKLSS---QQLVAVLDPPRAGLHSKVI 512
Query: 714 KAIRTFEPIKKLVYVSCN 767
A+R E IK+L+YVSCN
Sbjct: 513 LAMRKAENIKRLLYVSCN 530
Score = 40.0 bits (92), Expect(2) = 4e-17
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +1
Query: 799 LCKGISKTMKGTPFVPTKAIAFDLFPHT 882
LC+ S +KGTPF P KA+A DLFP T
Sbjct: 541 LCRAPSNRVKGTPFHPVKAVAVDLFPQT 568
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,029,717,278
Number of extensions: 16604850
Number of successful extensions: 46333
Number of sequences better than 10.0: 342
Number of HSP's gapped: 46077
Number of HSP's successfully gapped: 380
Length of query: 328
Length of database: 1,051,180,864
Length adjustment: 129
Effective length of query: 199
Effective length of database: 633,664,753
Effective search space: 126099285847
Effective search space used: 126099285847
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
1 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
1 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |