Contig-U12286-1
Contig ID Contig-U12286-1
Contig update 2002.12.18
Contig sequence
>Contig-U12286-1 (Contig-U12286-1Q) /CSM_Contig/Contig-U12286-1Q.Seq.d
CACTGTTGGCCTACTGGAATAAATGTCAAGTAAATTCATGTGATAAAACT
ACAGGAAATTGTAAACCAGAAAATTTAAAGTGCCCAGACAGATCAAATGA
GTGTCTTAAAAATACAGGTTGTGATGATTTAACCGGTTGTAAATATGTTA
GTATATGCACAGATTCATGCGATAAAAAAGGTAATGCTTGTGTTGCAGGT
AAATGTCAACAAAAAACAACTAGCGATTGTGCTGCTGAGTTAGATGATAA
TTCATGTAAAGTATATTCTTGTAATTCAACTCGTGGTGGTTGTTACTCTG
AAAACAAATGTAAACCAGATCCAACTCAAATTTGTGATGTTGCAAGTTGT
GATGATGGTGCTTGTNGTATCAAAACTTTACCACCTGATGAATGTAATTG
TGGTTGTAAACCAAACTTTTGCCAAAAGAGTAATTGTGTTAAAAACCCAT
CAAATAATCAATNCGAATGTTCT----------TGTGATGCAGTGGCCCA
AAAAATAACTCATGTACCATATGATACTTGTAAAGGCTGTATGTCATGTA
ATCCATCAAATGGTGATTGTGAAGCTCATAACGAGGTTTGTAATGATTTT
AATGCATGTACTGAAAATGTCTGTTCTCCAGTTAAAGTTGGTGCAGGTGT
TGGTGAATGTGTAACTACCAATACAACATGTGCACCAACCACAAACGTTG
ATAAATGTAAAAACTACCTTTGCGATTCTGAAAAAGGTTGTTATGAAACC
GATGTAGTTTGTCCAGATAGTGGAAATTGTAAAGTTGGTCATTGTGATTC
CAAGGTAGGTTGCTCTTTGAAGCCACGTGTCTGTAAATCACCAGCTTTTT
GCATCGTAGCAGAATGTGATGAAACTGTTGGTTGCATTGCATTTGAGAGA
CGTTGTGCATCAAGTAATCCAAAATGTAAAGCAGGTATTTGTGTAAATGG
TACAACACCAGAAGAAGGTGAATGTGAATCTGTAAATTATGATCCAAAAC
CATTTATTTGTCAAACTGGTGCTATAGTTTCTACTGCTGTAATTGCTGGT
GTAACTGTTGCTGGTGCTGTTGCTCTTGGTATTTTCATTTATGGTGGTAA
ACGTGGTTATGATTATTGGAAAGAAAGTAGAAGCATTTCTATGAGTTCTG
CTGTTTCAAGTCCAATGTATGTTCCTTCTGCAAATGCTTCTGAAAATCCA
CTTTATATTCCAGAAGGAGAATTATAAATTAAAAATAAATAAAAAATTGT
ACTATATTAAATATTTACCAAAATAGAACTCAAATACTCAAACAGGGTTA
TTGTAACAAAA

Gap gap included
Contig length 1301
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 4571593
End point 4572882
Strand (PLUS/MINUS) PLUS
Number of clones 26
Number of EST 27
Link to clone list U12286
List of clone(s)

est1=VFB760F,1,474
est2=VHO838Z,475,1221
est3=VHB861Z,482,1216
est4=VHL608Z,488,1237
est5=VHO887Z,498,1303
est6=VHE409Z,505,1288
est7=VHE263Z,508,1237
est8=VFB760Z,515,1209
est9=VHN167Z,528,1303
est10=VHB596Z,563,1302
est11=VHD260Z,563,1287
est12=VFC520Z,564,1302
est13=VHN157Z,575,1246
est14=VHA729Z,584,1264
est15=VHF336Z,596,1117
est16=VHE834Z,616,1117
est17=VHK735Z,617,1305
est18=VHE254Z,618,1195
est19=VHF284Z,628,1115
est20=VHG114Z,634,1237
est21=VHC330Z,635,1302
est22=VHJ327Z,648,802
est23=VHF787Z,689,1115
est24=VHQ303Z,693,1221
est25=VHH188Z,711,1304
est26=VHM860Z,721,857
est27=VHJ868Z,1142,1266
Translated Amino Acid sequence
LLAYWNKCQVNSCDKTTGNCKPENLKCPDRSNECLKNTGCDDLTGCKYVSICTDSCDKKG
NACVAGKCQQKTTSDCAAELDDNSCKVYSCNSTRGGCYSENKCKPDPTQICDVASCDDGA
CXIKTLPPDECNCGCKPNFCQKSNCVKNPSNNQXECS---

---CDAVAQKITHVPYDTCKGCMSCNPSNGDCEAHNEVCNDFNACTENVCSPVKVGAGVG
ECVTTNTTCAPTTNVDKCKNYLCDSEKGCYETDVVCPDSGNCKVGHCDSKVGCSLKPRVC
KSPAFCIVAECDETVGCIAFERRCASSNPKCKAGICVNGTTPEEGECESVNYDPKPFICQ
TGAIVSTAVIAGVTVAGAVALGIFIYGGKRGYDYWKESRSISMSSAVSSPMYVPSANASE
NPLYIPEGEL*iknk*kivly*iftkielkysnrvivtk


Translated Amino Acid sequence (All Frames)
Frame A:
hcwptginvk*ihviklqeivnqki*saqtdqmsvlkiqvvmi*pvvnmlvyaqihaikk
vmlvlqvnvnkkqlaivlls*miihvkyilviqlvvvvtlktnvnqiqlkfvmlqvvmmv
lvvsklyhlmnvivvvnqtfakrvivlkthqiinxnv---

---CDAVAQKITHVPYDTCKGCMSCNPSNGDCEAHNEVCNDFNACTENVCSPVKVGAGVG
ECVTTNTTCAPTTNVDKCKNYLCDSEKGCYETDVVCPDSGNCKVGHCDSKVGCSLKPRVC
KSPAFCIVAECDETVGCIAFERRCASSNPKCKAGICVNGTTPEEGECESVNYDPKPFICQ
TGAIVSTAVIAGVTVAGAVALGIFIYGGKRGYDYWKESRSISMSSAVSSPMYVPSANASE
NPLYIPEGEL*iknk*kivly*iftkielkysnrvivtk

Frame B:
tvglle*msskfm**nyrkl*trkfkvprqik*vs*kyrl**fnrl*ic*ymhrfmr*kr
*clccr*mstknn*rlcc*vr**fm*sifl*fnswwlll*kqm*trsnsnl*cckl**wc
lxyqnftt**m*lwl*tkllpke*lc*kpik*sxrmf---

---vmqwpkk*lmyhmilvkavchvihqmvivklitrfvmilmhvlkmsvlqlklvqvlv
nv*lpiqhvhqpqtlinvkttfailkkvvmkpm*fvqiveivklvivipr*val*shvsv
nhqlfas*qnvmkllvalhlrdvvhqviqnvkqvfv*mvqhqkkvnvnl*imiqnhlfvk
lvl*flll*llv*lllvllllvfsfmvvnvvmiigkkveafl*vllfqvqcmfllqmllk
ihfifqkenyklkinkklyyikylpk*nsntqtgll*q

Frame C:
LLAYWNKCQVNSCDKTTGNCKPENLKCPDRSNECLKNTGCDDLTGCKYVSICTDSCDKKG
NACVAGKCQQKTTSDCAAELDDNSCKVYSCNSTRGGCYSENKCKPDPTQICDVASCDDGA
CXIKTLPPDECNCGCKPNFCQKSNCVKNPSNNQXECS---

---*csgpknnscti*yl*rlyvm*sikw*l*ss*rgl**f*cmy*kclfss*swcrcw*
mcnyqynmctnhkr**m*klplrf*krll*nrcslsr*wkl*swsl*fqgrllfeatcl*
itsflhrsrm**ncwlhci*etlcik*skm*srylckwyntrrr*m*ickl*sktiylsn
wcysfyccncwcnccwcccswyfhlww*twl*llerk*khfyefccfksnvcsfckcf*k
stlysrrriin*k*iknctilniyqnrtqilkqgycnk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U12286-1 (Contig-U12286-1Q)
/CSM_Contig/Contig-U12286-1Q.Seq.d
(1311 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U12286-1 (Contig-U12286-1Q) /CSM_Contig/Conti... 2343 0.0
Contig-U13087-1 (Contig-U13087-1Q) /CSM_Contig/Conti... 66 1e-10
Contig-U12833-1 (Contig-U12833-1Q) /CSM_Contig/Conti... 66 1e-10
Contig-U11582-1 (Contig-U11582-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U11413-1 (Contig-U11413-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U11698-1 (Contig-U11698-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U10642-1 (Contig-U10642-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U14191-1 (Contig-U14191-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U13940-1 (Contig-U13940-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U02066-1 (Contig-U02066-1Q) /CSM_Contig/Conti... 36 0.093

>Contig-U12286-1 (Contig-U12286-1Q) /CSM_Contig/Contig-U12286-1Q.Seq.d
Length = 1311

Score = 2343 bits (1182), Expect = 0.0
Identities = 1218/1218 (100%)
Strand = Plus / Plus


Query: 1 cactgttggcctactggaataaatgtcaagtaaattcatgtgataaaactacaggaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cactgttggcctactggaataaatgtcaagtaaattcatgtgataaaactacaggaaatt 60


Query: 61 gtaaaccagaaaatttaaagtgcccagacagatcaaatgagtgtcttaaaaatacaggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtaaaccagaaaatttaaagtgcccagacagatcaaatgagtgtcttaaaaatacaggtt 120


Query: 121 gtgatgatttaaccggttgtaaatatgttagtatatgcacagattcatgcgataaaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgatgatttaaccggttgtaaatatgttagtatatgcacagattcatgcgataaaaaag 180


Query: 181 gtaatgcttgtgttgcaggtaaatgtcaacaaaaaacaactagcgattgtgctgctgagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtaatgcttgtgttgcaggtaaatgtcaacaaaaaacaactagcgattgtgctgctgagt 240


Query: 241 tagatgataattcatgtaaagtatattcttgtaattcaactcgtggtggttgttactctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagatgataattcatgtaaagtatattcttgtaattcaactcgtggtggttgttactctg 300


Query: 301 aaaacaaatgtaaaccagatccaactcaaatttgtgatgttgcaagttgtgatgatggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaacaaatgtaaaccagatccaactcaaatttgtgatgttgcaagttgtgatgatggtg 360


Query: 361 cttgtngtatcaaaactttaccacctgatgaatgtaattgtggttgtaaaccaaactttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttgtngtatcaaaactttaccacctgatgaatgtaattgtggttgtaaaccaaactttt 420


Query: 421 gccaaaagagtaattgtgttaaaaacccatcaaataatcaatncgaatgttctnnnnnnn 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gccaaaagagtaattgtgttaaaaacccatcaaataatcaatncgaatgttctnnnnnnn 480


Query: 481 nnntgtgatgcagtggcccaaaaaataactcatgtaccatatgatacttgtaaaggctgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 nnntgtgatgcagtggcccaaaaaataactcatgtaccatatgatacttgtaaaggctgt 540


Query: 541 atgtcatgtaatccatcaaatggtgattgtgaagctcataacgaggtttgtaatgatttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atgtcatgtaatccatcaaatggtgattgtgaagctcataacgaggtttgtaatgatttt 600


Query: 601 aatgcatgtactgaaaatgtctgttctccagttaaagttggtgcaggtgttggtgaatgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aatgcatgtactgaaaatgtctgttctccagttaaagttggtgcaggtgttggtgaatgt 660


Query: 661 gtaactaccaatacaacatgtgcaccaaccacaaacgttgataaatgtaaaaactacctt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtaactaccaatacaacatgtgcaccaaccacaaacgttgataaatgtaaaaactacctt 720


Query: 721 tgcgattctgaaaaaggttgttatgaaaccgatgtagtttgtccagatagtggaaattgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgcgattctgaaaaaggttgttatgaaaccgatgtagtttgtccagatagtggaaattgt 780


Query: 781 aaagttggtcattgtgattccaaggtaggttgctctttgaagccacgtgtctgtaaatca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aaagttggtcattgtgattccaaggtaggttgctctttgaagccacgtgtctgtaaatca 840


Query: 841 ccagctttttgcatcgtagcagaatgtgatgaaactgttggttgcattgcatttgagaga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ccagctttttgcatcgtagcagaatgtgatgaaactgttggttgcattgcatttgagaga 900


Query: 901 cgttgtgcatcaagtaatccaaaatgtaaagcaggtatttgtgtaaatggtacaacacca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cgttgtgcatcaagtaatccaaaatgtaaagcaggtatttgtgtaaatggtacaacacca 960


Query: 961 gaagaaggtgaatgtgaatctgtaaattatgatccaaaaccatttatttgtcaaactggt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gaagaaggtgaatgtgaatctgtaaattatgatccaaaaccatttatttgtcaaactggt 1020


Query: 1021 gctatagtttctactgctgtaattgctggtgtaactgttgctggtgctgttgctcttggt 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gctatagtttctactgctgtaattgctggtgtaactgttgctggtgctgttgctcttggt 1080


Query: 1081 attttcatttatggtggtaaacgtggttatgattattggaaagaaagtagaagcatttct 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 attttcatttatggtggtaaacgtggttatgattattggaaagaaagtagaagcatttct 1140


Query: 1141 atgagttctgctgtttcaagtccaatgtatgttccttctgcaaatgcttctgaaaatcca 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 atgagttctgctgtttcaagtccaatgtatgttccttctgcaaatgcttctgaaaatcca 1200


Query: 1201 ctttatattccagaagga 1218
||||||||||||||||||
Sbjct: 1201 ctttatattccagaagga 1218


Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Plus


Query: 1276 gaactcaaatactcaaacagggttattgtaacaaaa 1311
||||||||||||||||||||||||||||||||||||
Sbjct: 1276 gaactcaaatactcaaacagggttattgtaacaaaa 1311


>Contig-U13087-1 (Contig-U13087-1Q) /CSM_Contig/Contig-U13087-1Q.Seq.d
Length = 547

Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Plus


Query: 986 attatgatccaaaaccatttatttgtcaaactggtgctatagtttctactgctgtaattg 1045
|||||||||||||||||||| ||||||||| | |||| ||||||| |||||||| ||||
Sbjct: 433 attatgatccaaaaccatttgtttgtcaaaaagctgctttagtttcaactgctgttattg 492


Query: 1046 c 1046
|
Sbjct: 493 c 493


>Contig-U12833-1 (Contig-U12833-1Q) /CSM_Contig/Contig-U12833-1Q.Seq.d
Length = 571

Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Plus


Query: 986 attatgatccaaaaccatttatttgtcaaactggtgctatagtttctactgctgtaattg 1045
|||||||||||||||||||| ||||||||| | |||| ||||||| |||||||| ||||
Sbjct: 456 attatgatccaaaaccatttgtttgtcaaaaagctgctttagtttcaactgctgttattg 515


Query: 1046 c 1046
|
Sbjct: 516 c 516


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,583
Number of Sequences: 6905
Number of extensions: 11583
Number of successful extensions: 1576
Number of sequences better than 10.0: 526
length of query: 1311
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1295
effective length of database: 5,564,391
effective search space: 7205886345
effective search space used: 7205886345
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.30
Homology vs DNA
Query= Contig-U12286-1 (Contig-U12286-1Q) /CSM_Contig/Contig-U12286-1Q.Seq.d
(1311 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ445713) Dictyostelium discoideum cDNA clone:ddv60l10, 3' ... 1459 0.0 1
(BJ437552) Dictyostelium discoideum cDNA clone:ddv34j16, 3' ... 1419 0.0 1
(BJ445882) Dictyostelium discoideum cDNA clone:ddv60n22, 3' ... 1413 0.0 1
(BJ438954) Dictyostelium discoideum cDNA clone:ddv39b04, 3' ... 1392 0.0 1
(BJ443810) Dictyostelium discoideum cDNA clone:ddv54o02, 3' ... 1360 0.0 2
(BJ444820) Dictyostelium discoideum cDNA clone:ddv57e17, 3' ... 1314 0.0 2
(BJ430097) Dictyostelium discoideum cDNA clone:ddv6g05, 3' e... 1285 0.0 1
(BJ438322) Dictyostelium discoideum cDNA clone:ddv37g16, 3' ... 1281 0.0 1
(BJ437658) Dictyostelium discoideum cDNA clone:ddv34o23, 3' ... 1275 0.0 1
(BJ429701) Dictyostelium discoideum cDNA clone:ddv4h15, 3' e... 1271 0.0 1
(BJ444796) Dictyostelium discoideum cDNA clone:ddv57a15, 3' ... 1263 0.0 1
(BJ439181) Dictyostelium discoideum cDNA clone:ddv39m16, 3' ... 1255 0.0 3
(BJ436832) Dictyostelium discoideum cDNA clone:ddv32j07, 3' ... 1245 0.0 1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 1201 0.0 1
(BJ443234) Dictyostelium discoideum cDNA clone:ddv52f09, 3' ... 1172 0.0 1
(BJ437795) Dictyostelium discoideum cDNA clone:ddv35l07, 3' ... 1144 0.0 1
(BJ440258) Dictyostelium discoideum cDNA clone:ddv43k03, 3' ... 1138 0.0 1
(BJ439168) Dictyostelium discoideum cDNA clone:ddv39k14, 3' ... 1120 0.0 1
(BJ446546) Dictyostelium discoideum cDNA clone:ddv63f01, 3' ... 1009 0.0 1
(BJ439708) Dictyostelium discoideum cDNA clone:ddv41h09, 3' ... 999 0.0 1
(BJ441191) Dictyostelium discoideum cDNA clone:ddv45o21, 3' ... 995 0.0 1
(BJ439383) Dictyostelium discoideum cDNA clone:ddv40d10, 3' ... 971 0.0 1
(BJ439846) Dictyostelium discoideum cDNA clone:ddv41g22, 3' ... 950 0.0 1
(BJ411475) Dictyostelium discoideum cDNA clone:ddv4h15, 5' e... 926 0.0 1
(BJ440192) Dictyostelium discoideum cDNA clone:ddv42n21, 3' ... 841 0.0 1
(BJ446541) Dictyostelium discoideum cDNA clone:ddv63e01, 3' ... 301 e-101 2
(BJ442250) Dictyostelium discoideum cDNA clone:ddv49f07, 3' ... 234 8e-73 2
(BJ444506) Dictyostelium discoideum cDNA clone:ddv56h16, 3' ... 157 6e-48 2
(U67940) Dictyostelium discoideum ORFveg106 mRNA, complete cds. 161 1e-38 3
(BJ443105) Dictyostelium discoideum cDNA clone:ddv51m23, 3' ... 161 3e-36 3
(BJ438370) Dictyostelium discoideum cDNA clone:ddv37p16, 3' ... 155 6e-36 2
(BJ440912) Dictyostelium discoideum cDNA clone:ddv45i03, 3' ... 161 2e-35 2
(BJ444639) Dictyostelium discoideum cDNA clone:ddv57c01, 3' ... 161 2e-35 2
(BJ443370) Dictyostelium discoideum cDNA clone:ddv52p14, 3' ... 161 2e-35 2
(BJ442271) Dictyostelium discoideum cDNA clone:ddv49j09, 3' ... 161 2e-35 2
(BJ440659) Dictyostelium discoideum cDNA clone:ddv44i10, 3' ... 161 2e-35 2
(BJ442942) Dictyostelium discoideum cDNA clone:ddv51m07, 3' ... 161 2e-35 2
(BJ445339) Dictyostelium discoideum cDNA clone:ddv59n01, 3' ... 161 2e-35 2
(BJ446731) Dictyostelium discoideum cDNA clone:ddv63m15, 3' ... 161 2e-35 2
(BJ437885) Dictyostelium discoideum cDNA clone:ddv35n13, 3' ... 161 2e-35 2
(BJ435998) Dictyostelium discoideum cDNA clone:ddv29l07, 3' ... 161 2e-35 2
(BJ438518) Dictyostelium discoideum cDNA clone:ddv37m01, 3' ... 161 2e-35 2
(BJ443251) Dictyostelium discoideum cDNA clone:ddv52j07, 3' ... 161 2e-35 2
(BJ434080) Dictyostelium discoideum cDNA clone:ddv23g24, 3' ... 161 2e-35 2
(BJ444085) Dictyostelium discoideum cDNA clone:ddv55n03, 3' ... 161 2e-35 2
(BJ438168) Dictyostelium discoideum cDNA clone:ddv36g16, 3' ... 161 2e-35 2
(BJ443165) Dictyostelium discoideum cDNA clone:ddv52h05, 3' ... 161 2e-35 2
(BJ438574) Dictyostelium discoideum cDNA clone:ddv37h10, 3' ... 161 2e-35 2
(BJ436474) Dictyostelium discoideum cDNA clone:ddv31e07, 3' ... 161 2e-35 2
(AU034843) Dictyostelium discoideum slug cDNA, clone SLE572. 161 2e-35 2
(BJ442056) Dictyostelium discoideum cDNA clone:ddv48p13, 3' ... 161 2e-35 2
(BJ438400) Dictyostelium discoideum cDNA clone:ddv37f22, 3' ... 161 2e-35 2
(BJ437797) Dictyostelium discoideum cDNA clone:ddv35l11, 3' ... 161 2e-35 2
(BJ436829) Dictyostelium discoideum cDNA clone:ddv32i10, 3' ... 161 2e-35 2
(BJ438631) Dictyostelium discoideum cDNA clone:ddv38c04, 3' ... 161 2e-35 2
(BJ446562) Dictyostelium discoideum cDNA clone:ddv63i06, 3' ... 161 2e-35 2
(BJ443374) Dictyostelium discoideum cDNA clone:ddv52p18, 3' ... 161 2e-35 2
(BJ444372) Dictyostelium discoideum cDNA clone:ddv56m05, 3' ... 161 2e-35 2
(BJ445013) Dictyostelium discoideum cDNA clone:ddv58l06, 3' ... 161 2e-35 2
(BJ446099) Dictyostelium discoideum cDNA clone:ddv61l15, 3' ... 161 2e-35 2
(BJ436435) Dictyostelium discoideum cDNA clone:ddv31m02, 3' ... 161 2e-35 2
(BJ446739) Dictyostelium discoideum cDNA clone:ddv63o14, 3' ... 161 2e-35 2
(BJ436511) Dictyostelium discoideum cDNA clone:ddv31l08, 3' ... 161 2e-35 2
(BJ438483) Dictyostelium discoideum cDNA clone:ddv37f06, 3' ... 161 2e-35 2
(BJ438898) Dictyostelium discoideum cDNA clone:ddv38f23, 3' ... 161 2e-35 2
(BJ431233) Dictyostelium discoideum cDNA clone:ddv13h10, 3' ... 161 2e-35 2
(BJ442343) Dictyostelium discoideum cDNA clone:ddv49g16, 3' ... 161 2e-35 2
(BJ446311) Dictyostelium discoideum cDNA clone:ddv62g12, 3' ... 161 2e-35 2
(BJ441937) Dictyostelium discoideum cDNA clone:ddv48f11, 3' ... 161 2e-35 2
(BJ437887) Dictyostelium discoideum cDNA clone:ddv35n15, 3' ... 161 2e-35 2
(BJ436451) Dictyostelium discoideum cDNA clone:ddv31p02, 3' ... 161 2e-35 2
(BJ442150) Dictyostelium discoideum cDNA clone:ddv49a06, 3' ... 161 3e-35 2
(BJ445696) Dictyostelium discoideum cDNA clone:ddv60g11, 3' ... 161 3e-35 2
(BJ441314) Dictyostelium discoideum cDNA clone:ddv46g11, 3' ... 161 3e-35 2
(BJ434845) Dictyostelium discoideum cDNA clone:ddv25l01, 3' ... 161 3e-35 2
(BJ441895) Dictyostelium discoideum cDNA clone:ddv48n06, 3' ... 161 3e-35 2
(BJ436512) Dictyostelium discoideum cDNA clone:ddv31l09, 3' ... 161 3e-35 2
(BJ446345) Dictyostelium discoideum cDNA clone:ddv62n07, 3' ... 161 3e-35 2
(BJ437459) Dictyostelium discoideum cDNA clone:ddv34g11, 3' ... 161 3e-35 2
(BJ437374) Dictyostelium discoideum cDNA clone:ddv34f05, 3' ... 161 3e-35 2
(BJ445858) Dictyostelium discoideum cDNA clone:ddv60i23, 3' ... 161 3e-35 2
(BJ436687) Dictyostelium discoideum cDNA clone:ddv31o19, 3' ... 161 3e-35 2
(BJ446561) Dictyostelium discoideum cDNA clone:ddv63i04, 3' ... 161 8e-35 1
(BJ443172) Dictyostelium discoideum cDNA clone:ddv52j03, 3' ... 161 8e-35 1
(BJ442983) Dictyostelium discoideum cDNA clone:ddv51e13, 3' ... 161 8e-35 1
(BJ441525) Dictyostelium discoideum cDNA clone:ddv46p23, 3' ... 161 8e-35 1
(BJ440927) Dictyostelium discoideum cDNA clone:ddv45l01, 3' ... 161 8e-35 1
(BJ424335) Dictyostelium discoideum cDNA clone:ddv52j03, 5' ... 161 8e-35 1
(BJ440009) Dictyostelium discoideum cDNA clone:ddv42i09, 3' ... 157 3e-34 2
(BJ439045) Dictyostelium discoideum cDNA clone:ddv39d07, 3' ... 155 1e-33 2
(BJ440736) Dictyostelium discoideum cDNA clone:ddv44g15, 3' ... 155 1e-33 2
(BJ442289) Dictyostelium discoideum cDNA clone:ddv49m10, 3' ... 155 1e-33 2
(BJ443708) Dictyostelium discoideum cDNA clone:ddv53h23, 3' ... 155 1e-33 2
(BJ444227) Dictyostelium discoideum cDNA clone:ddv55n16, 3' ... 155 1e-33 2
(BJ436838) Dictyostelium discoideum cDNA clone:ddv32k08, 3' ... 155 1e-33 2
(BJ442178) Dictyostelium discoideum cDNA clone:ddv49g02, 3' ... 155 1e-33 2
(BJ442143) Dictyostelium discoideum cDNA clone:ddv48p22, 3' ... 155 2e-33 2
(BJ436875) Dictyostelium discoideum cDNA clone:ddv32b18, 3' ... 155 5e-33 1
(C93772) Dictyostelium discoideum slug cDNA, clone SSL704. 153 5e-33 2
(BJ436516) Dictyostelium discoideum cDNA clone:ddv31m07, 3' ... 153 6e-33 2

>(BJ445713) Dictyostelium discoideum cDNA clone:ddv60l10, 3' end,
single read.
Length = 746

Score = 1459 bits (736), Expect = 0.0
Identities = 736/736 (100%)
Strand = Plus / Minus


Query: 484 tgtgatgcagtggcccaaaaaataactcatgtaccatatgatacttgtaaaggctgtatg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tgtgatgcagtggcccaaaaaataactcatgtaccatatgatacttgtaaaggctgtatg 687


Query: 544 tcatgtaatccatcaaatggtgattgtgaagctcataacgaggtttgtaatgattttaat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tcatgtaatccatcaaatggtgattgtgaagctcataacgaggtttgtaatgattttaat 627


Query: 604 gcatgtactgaaaatgtctgttctccagttaaagttggtgcaggtgttggtgaatgtgta 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gcatgtactgaaaatgtctgttctccagttaaagttggtgcaggtgttggtgaatgtgta 567


Query: 664 actaccaatacaacatgtgcaccaaccacaaacgttgataaatgtaaaaactacctttgc 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 actaccaatacaacatgtgcaccaaccacaaacgttgataaatgtaaaaactacctttgc 507


Query: 724 gattctgaaaaaggttgttatgaaaccgatgtagtttgtccagatagtggaaattgtaaa 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gattctgaaaaaggttgttatgaaaccgatgtagtttgtccagatagtggaaattgtaaa 447


Query: 784 gttggtcattgtgattccaaggtaggttgctctttgaagccacgtgtctgtaaatcacca 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gttggtcattgtgattccaaggtaggttgctctttgaagccacgtgtctgtaaatcacca 387


Query: 844 gctttttgcatcgtagcagaatgtgatgaaactgttggttgcattgcatttgagagacgt 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gctttttgcatcgtagcagaatgtgatgaaactgttggttgcattgcatttgagagacgt 327


Query: 904 tgtgcatcaagtaatccaaaatgtaaagcaggtatttgtgtaaatggtacaacaccagaa 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgtgcatcaagtaatccaaaatgtaaagcaggtatttgtgtaaatggtacaacaccagaa 267


Query: 964 gaaggtgaatgtgaatctgtaaattatgatccaaaaccatttatttgtcaaactggtgct 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gaaggtgaatgtgaatctgtaaattatgatccaaaaccatttatttgtcaaactggtgct 207


Query: 1024 atagtttctactgctgtaattgctggtgtaactgttgctggtgctgttgctcttggtatt 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 atagtttctactgctgtaattgctggtgtaactgttgctggtgctgttgctcttggtatt 147


Query: 1084 ttcatttatggtggtaaacgtggttatgattattggaaagaaagtagaagcatttctatg 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ttcatttatggtggtaaacgtggttatgattattggaaagaaagtagaagcatttctatg 87


Query: 1144 agttctgctgtttcaagtccaatgtatgttccttctgcaaatgcttctgaaaatccactt 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 agttctgctgtttcaagtccaatgtatgttccttctgcaaatgcttctgaaaatccactt 27


Query: 1204 tatattccagaaggag 1219
||||||||||||||||
Sbjct: 26 tatattccagaaggag 11

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,391,439,089
Number of extensions: 77126887
Number of successful extensions: 5983520
Number of sequences better than 10.0: 1383
Length of query: 1311
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1287
Effective length of database: 97,308,875,965
Effective search space: 125236523366955
Effective search space used: 125236523366955
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 2
Homology vs Protein
Query= Contig-U12286-1 (Contig-U12286-1Q) /CSM_Contig/Contig-U12286-1Q.Seq.d
(1311 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor; &AC11695... 416 0.0
(Q94494) RecName: Full=Protein psiH; Flags: Precursor; &U67940_... 207 7e-87
(Q557E9) RecName: Full=Protein psiG; Flags: Precursor; &AC11568... 162 1e-68
(Q54P69) RecName: Full=Protein psiM; Flags: Precursor; 191 4e-65
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor; 187 9e-46
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor; 108 2e-28
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor; 102 3e-27
A26838(A26838)prestalk protein precursor - slime mold (Dictyoste... 71 4e-23
(P11976) RecName: Full=Prestalk protein; AltName: Full=Extracell... 70 7e-23
(Q55FQ4) RecName: Full=Protein psiB; Flags: Precursor; 102 4e-20
AC116984_103(AC116984|pid:none) Dictyostelium discoideum chromos... 65 3e-18
S44208(S44208) extracellular matrix protein B - Dictyostelium mi... 69 5e-15
A27020(A27020)DIF-induced prestalk pDd63 protein precursor - sli... 61 7e-14
AC117072_61(AC117072|pid:none) Dictyostelium discoideum chromoso... 64 3e-12
(Q54C31) RecName: Full=Protein psiR; Flags: Precursor; 54 1e-07
AY262832_1(AY262832|pid:none) Solenopsis invicta vitellogenin re... 45 2e-07
U73710_1(U73710|pid:none) Entamoeba dispar Gal/GalNAc-inhibitabl... 54 1e-05
AJ879619_1(AJ879619|pid:none) Solea senegalensis mRNA for very l... 42 3e-05
AJ879619_2(AJ879619|pid:none) Solea senegalensis mRNA for very l... 42 3e-05
AF501275_1(AF501275|pid:none) Entamoeba histolytica clone C3 Gal... 53 3e-05
(Q54FD8) RecName: Full=Protein psiD; Flags: Precursor; 53 3e-05
FJ039903_1(FJ039903|pid:none) Hordeum vulgare DEP1 (DEP1) mRNA, ... 52 5e-05
AF501273_1(AF501273|pid:none) Entamoeba histolytica clone C1 Gal... 51 8e-05
AB218869_1(AB218869|pid:none) Rhyparobia maderae LpR mRNA for Li... 51 8e-05
EU974210_1(EU974210|pid:none) Zea mays clone 442907 keratin-asso... 42 1e-04
(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor; 50 1e-04
CP000113_1974(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 42 2e-04
L14815_1(L14815|pid:none) Entamoeba histolytica HM-1:IMSS galact... 50 2e-04
U28971_1(U28971|pid:none) Caenorhabditis elegans cosmid B0244, c... 49 4e-04
B88465(B88465)protein B0244.8 [imported] - Caenorhabditis elegans 49 4e-04
AM055942_182(AM055942|pid:none) Toxoplasma gondii RH, genomic DN... 49 4e-04
AM403063_1(AM403063|pid:none) Blattella germanica mRNA for lipop... 49 5e-04
AM403064_1(AM403064|pid:none) Blattella germanica mRNA for lipop... 49 5e-04
BC047187_1(BC047187|pid:none) Danio rerio very low density lipop... 40 8e-04
AL844507_33(AL844507|pid:none) Plasmodium falciparum 3D7 chromos... 48 9e-04
AF355595_1(AF355595|pid:none) Aedes aegypti lipophorin receptor ... 48 9e-04
AY348869_1(AY348869|pid:none) Aedes aegypti lipophorin receptor ... 48 9e-04
AY845260_1(AY845260|pid:none) Mytilus edulis clone 2 foot protei... 47 0.001
AB095016_1(AB095016|pid:none) Cynops pyrrhogaster Notch-1 mRNA f... 47 0.001
CP000113_6723(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 45 0.001
(O75690) RecName: Full=Keratin-associated protein 5-8; AltName: ... 47 0.002
AJ006692_1(AJ006692|pid:none) Homo sapiens UHS KerB gene. 47 0.002
AY265358_1(AY265358|pid:none) Homo sapiens glycoprotein receptor... 47 0.002
AF369477_1(AF369477|pid:none) Mus musculus strain 129P3/J lipopr... 47 0.002
AB031297_1(AB031297|pid:none) Sarcophaga peregrina mRNA for 120-... 47 0.002
(A2ARV4) RecName: Full=Low-density lipoprotein receptor-related ... 47 0.002
(Q07954) RecName: Full=Prolow-density lipoprotein receptor-relat... 47 0.002
AB209498_1(AB209498|pid:none) Homo sapiens mRNA for low density ... 47 0.002
AL590997_33(AL590997|pid:none) Mouse DNA sequence from clone RP2... 47 0.002
X55077_1(X55077|pid:none) H.sapiens mRNA fragment for alpha-2 ma... 47 0.002
(Q91ZX7) RecName: Full=Prolow-density lipoprotein receptor-relat... 47 0.002
AC007556_2(AC007556|pid:none) Homo sapiens BAC clone RP11-18C9 f... 47 0.002
S25111(S25111;S32554) alpha-2-macroglobulin receptor precursor -... 47 0.002
(P98164) RecName: Full=Low-density lipoprotein receptor-related ... 47 0.002
AY265357_1(AY265357|pid:none) Homo sapiens glycoprotein receptor... 47 0.002
CP000113_6294(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 47 0.002
AL805948_1(AL805948|pid:none) Mouse DNA sequence from clone RP23... 46 0.003
(Q9JI18) RecName: Full=Low-density lipoprotein receptor-related ... 46 0.003
FJ664125_1(FJ664125|pid:none) Tetrahymena tropicalis copper-indu... 46 0.003
AY540953_1(AY540953|pid:none) Strongylocentrotus purpuratus prot... 46 0.003
CP000769_2860(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 38 0.003
AP008215_740(AP008215|pid:none) Oryza sativa (japonica cultivar-... 45 0.004
AP005419_8(AP005419|pid:none) Oryza sativa Japonica Group genomi... 45 0.004
AY765220_1(AY765220|pid:none) Tetrahymena pyriformis GL metallot... 45 0.004
FJ501956_1(FJ501956|pid:none) Oryza sativa Indica Group keratin ... 45 0.004
BC140725_1(BC140725|pid:none) Homo sapiens keratin associated pr... 42 0.005
(Q9NZR2) RecName: Full=Low-density lipoprotein receptor-related ... 45 0.006
(Q9QXX0) RecName: Full=Protein jagged-1; Short=Jagged1;... 45 0.006
T16840(T16840)hypothetical protein T10E10.4 - Caenorhabditis ele... 45 0.006
U39644_2(U39644|pid:none) Caenorhabditis elegans cosmid T10E10, ... 45 0.006
AY173045_1(AY173045|pid:none) Morone americana vitellogenin rece... 39 0.007
U57753_1(U57753|pid:none) Strongylocentrotus purpuratus SFE1 mRN... 45 0.008
AL032657_4(AL032657|pid:none) Caenorhabditis elegans YAC Y47H9C,... 45 0.008
A56136(A56136)jagged protein precursor - rat 44 0.010
AJ628246_1(AJ628246|pid:none) Homo sapiens partial mRNA for kera... 44 0.010
AB006906_1(AB006906|pid:none) Xenopus laevis mRNA for vitellogen... 44 0.010
(Q6L8H2) RecName: Full=Keratin-associated protein 5-3; AltName: ... 44 0.010
AM746676_3301(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 44 0.010
(Q968Z6) RecName: Full=Protein psiA; AltName: Full=Prespore-cell... 44 0.010
AL590997_31(AL590997|pid:none) Mouse DNA sequence from clone RP2... 44 0.010
(Q25464) RecName: Full=Adhesive plaque matrix protein 2; AltName... 44 0.013
(P60409) RecName: Full=Keratin-associated protein 10-7; AltName:... 44 0.013
EU972808_1(EU972808|pid:none) Zea mays clone 388422 unknown mRNA. 44 0.013
AE014297_4001(AE014297|pid:none) Drosophila melanogaster chromos... 44 0.013
DQ482581_1(DQ482581|pid:none) Galleria mellonella lipophorin rec... 44 0.013
AM746676_392(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 44 0.013
AB076354_1(AB076354|pid:none) Homo sapiens KRTAP18.7 mRNA for ke... 44 0.013
U09191_1(U09191|pid:none) Carassius auratus Notch-3 homolog mRNA... 44 0.013
T16642(T16642) hypothetical protein R01H2.3 - Caenorhabditis ele... 44 0.013
AE014297_4000(AE014297|pid:none) Drosophila melanogaster chromos... 44 0.013
(Q62220) RecName: Full=Keratin-associated protein 5-4; AltName: ... 44 0.013
AM746676_8749(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 39 0.013
(Q99087) RecName: Full=Low-density lipoprotein receptor 1; ... 44 0.017
AC080162_4(AC080162|pid:none) Homo sapiens BAC clone RP11-400L8 ... 44 0.017
BC170345_1(BC170345|pid:none) Xenopus laevis low density lipopro... 44 0.017
U92649_1(U92649|pid:none) Homo sapiens snake venom-like protease... 44 0.017
QRXLL1(A40388)LDL receptor 1 precursor - African clawed frog 44 0.017
BC087344_1(BC087344|pid:none) Xenopus laevis cDNA clone MGC:9909... 44 0.017
AF283408_1(AF283408|pid:none) Homo sapiens candidate tumor suppr... 44 0.017
(P78536) RecName: Full=Disintegrin and metalloproteinase domain-... 44 0.017
(Q1ZXC5) RecName: Full=Protein psiC; Flags: Precursor; 44 0.017
AL590997_30(AL590997|pid:none) Mouse DNA sequence from clone RP2... 43 0.017
(Q9Z1K9) RecName: Full=Disintegrin and metalloproteinase domain-... 43 0.022
(Q6L8G4) RecName: Full=Keratin-associated protein 5-11; AltName:... 43 0.022
U69614_1(U69614|pid:none) Mus musculus TNF-alpha converting enzy... 43 0.022
T27686(T27686)hypothetical protein ZK1067.7 - Caenorhabditis ele... 43 0.022
(P98157) RecName: Full=Low-density lipoprotein receptor-related ... 43 0.022
(Q04721) RecName: Full=Neurogenic locus notch homolog protein 2;... 43 0.022
AF308601_1(AF308601|pid:none) Homo sapiens NOTCH 2 (N2) mRNA, co... 43 0.022
AC008178_1(AC008178|pid:none) Homo sapiens BAC clone RP11-551O2 ... 43 0.022
Z70038_10(Z70038|pid:none) Caenorhabditis elegans Cosmid ZK1067,... 43 0.022
AE001362_120(AE001362|pid:none) Plasmodium falciparum 3D7 chromo... 43 0.022
AX357059_1(AX357059|pid:none) Sequence 21 from Patent EP1175909.... 43 0.022
EU420056_1(EU420056|pid:none) Tetrahymena pigmentosa strain HG2 ... 43 0.022
AM746676_2497(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 43 0.022
BT011327_1(BT011327|pid:none) Drosophila melanogaster SD22390 fu... 43 0.022
AK144161_1(AK144161|pid:none) Mus musculus RCB-0464 Meth-A cDNA,... 43 0.029
BC145270_1(BC145270|pid:none) Mus musculus a disintegrin and met... 43 0.029
AK302554_1(AK302554|pid:none) Homo sapiens cDNA FLJ51576 complet... 43 0.029
(P78504) RecName: Full=Protein jagged-1; Short=Jagged1;... 43 0.029
BC104354_1(BC104354|pid:none) Mus musculus predicted gene, ENSMU... 43 0.029
AJ007365_1(AJ007365|pid:none) Mus musculus mRNA for TNF-alpha co... 43 0.029
EF517527_1(EF517527|pid:none) Sus scrofa delta-like 1 protein (D... 43 0.029
DQ309459_1(DQ309459|pid:none) Sus scrofa delta-like 1 isoform B ... 43 0.029
AK137693_1(AK137693|pid:none) Mus musculus adult female vagina c... 43 0.029
AK312722_1(AK312722|pid:none) Homo sapiens cDNA, FLJ93126, highl... 43 0.029
EU564006_1(EU564006|pid:none) Sus scrofa delta-like 1 isoform C ... 43 0.029
BC138420_1(BC138420|pid:none) Mus musculus a disintegrin and met... 43 0.029
AK295005_1(AK295005|pid:none) Homo sapiens cDNA FLJ61253 complet... 43 0.029
AK139471_1(AK139471|pid:none) Mus musculus 10 days neonate corte... 43 0.029
U61276_1(U61276|pid:none) Human transmembrane protein Jagged 1 (... 43 0.029
BC138416_1(BC138416|pid:none) Mus musculus a disintegrin and met... 43 0.029
BC098393_1(BC098393|pid:none) Homo sapiens jagged 1 (Alagille sy... 43 0.029
EU675625_1(EU675625|pid:none) Hirudo medicinalis beta-integrin m... 43 0.029
BC104355_1(BC104355|pid:none) Mus musculus keratin associated pr... 42 0.037
AM050637_1(AM050637|pid:none) Blattella germanica mRNA for vitel... 42 0.037
AE014297_4004(AE014297|pid:none) Drosophila melanogaster chromos... 42 0.037
AF056359_1(AF056359|pid:none) Mus musculus tumor necrosis factor... 42 0.037
(Q8CFM6) RecName: Full=Stabilin-2; AltName: Full=Fasciclin, EGF-... 42 0.037
AB201472_1(AB201472|pid:none) Bombyx mori LpR2 mRNA for lipophor... 42 0.049
AB201474_1(AB201474|pid:none) Bombyx mori LpR4 mRNA for lipophor... 42 0.049
AY218841_2(AY218841|pid:none) Danio rerio clone BUSM1-81J4 brahm... 42 0.049
FJ554569_1(FJ554569|pid:none) Oryza sativa Japonica Group cultiv... 42 0.049
CP000251_2747(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 42 0.049
AB009278_1(AB009278|pid:none) Bos taurus mRNA for preadipocyte f... 42 0.049
BC131611_1(BC131611|pid:none) Homo sapiens keratin associated pr... 36 0.062
(P60412) RecName: Full=Keratin-associated protein 10-11; AltName... 36 0.062
Z98877_8(Z98877|pid:none) Caenorhabditis elegans YAC Y69H2, comp... 42 0.064
U54641_1(U54641|pid:none) Chironomus thummi 220 kDa silk protein... 42 0.064
Y10353_1(Y10353|pid:none) D.rerio notch5 mRNA. 42 0.064
T28674(T28674) alpha-51D-immobilization antigen - Paramecium tet... 42 0.064
DQ234084_1(DQ234084|pid:none) Paramecium tetraurelia A51 surface... 42 0.064
AE014297_4237(AE014297|pid:none) Drosophila melanogaster chromos... 42 0.064
BC039284_1(BC039284|pid:none) Mus musculus mucin 2, mRNA (cDNA c... 32 0.074
BC034197_1(BC034197|pid:none) Mus musculus mucin 2, mRNA (cDNA c... 32 0.074
AJ511873_1(AJ511873|pid:none) Mus musculus partial Muc2 gene for... 32 0.074
BC030862_1(BC030862|pid:none) Mus musculus mucin 2, mRNA (cDNA c... 32 0.077
BX323857_1(BX323857|pid:none) Mouse DNA sequence from clone RP23... 41 0.083
A49175(A49175;PH1570;S32113) Motch B protein - mouse (fragment) ... 41 0.083
AK155137_1(AK155137|pid:none) Mus musculus NOD-derived CD11c +ve... 41 0.083
AF074902_1(AF074902|pid:none) Caenorhabditis elegans laminin alp... 41 0.083
CP001131_2828(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 41 0.083
BT045135_1(BT045135|pid:none) Salmo salar clone ssal-rgf-513-057... 41 0.083
BC172642_1(BC172642|pid:none) Synthetic construct Mus musculus c... 41 0.083
AF289202_1(AF289202|pid:none) Caenorhabditis elegans transmembra... 41 0.083
AF065168_1(AF065168|pid:none) Giardia intestinalis variant-speci... 41 0.083
BC084953_1(BC084953|pid:none) Xenopus laevis X-Serrate-1 protein... 41 0.083
A23475(A23475)G surface protein - Paramecium primaurelia 41 0.083
(Q05793) RecName: Full=Basement membrane-specific heparan sulfat... 41 0.083
A35844(A35844)Xotch protein - African clawed frog 41 0.083
(P21783) RecName: Full=Neurogenic locus notch protein homolog; ... 41 0.083
F87908(F87908;E87908) protein T22A3.8 [imported] - Caenorhabditi... 41 0.083
CP001131_2569(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 41 0.083
X96557_1(X96557|pid:none) P.tetraurlia epsilon-51D gene. 41 0.083
AE014298_417(AE014298|pid:none) Drosophila melanogaster chromoso... 38 0.088
AE014298_420(AE014298|pid:none) Drosophila melanogaster chromoso... 38 0.089
AE014298_418(AE014298|pid:none) Drosophila melanogaster chromoso... 38 0.089
AE014298_419(AE014298|pid:none) Drosophila melanogaster chromoso... 38 0.089
AE014298_423(AE014298|pid:none) Drosophila melanogaster chromoso... 38 0.090
AL138972_3(AL138972|pid:none) Drosophila melanogaster BAC clone ... 38 0.091
(P35953) RecName: Full=Very low-density lipoprotein receptor; ... 41 0.11
DQ917572_1(DQ917572|pid:none) Parhyale hawaiensis notch protein ... 41 0.11
AY313175_1(AY313175|pid:none) Cricetulus griseus tumor necrosis ... 41 0.11
AL773560_5(AL773560|pid:none) Pig DNA sequence from clone PigI-5... 41 0.11
CP000769_2725(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 41 0.11
DQ103506_1(DQ103506|pid:none) Dermacentor variabilis vitellogeni... 41 0.11
DQ917530_1(DQ917530|pid:none) Demansia vestigiata metalloprotein... 41 0.11
AP007175_125(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 41 0.11
AK014635_1(AK014635|pid:none) Mus musculus 10 days neonate skin ... 41 0.11
AF380348_1(AF380348|pid:none) Cricetulus griseus tumor necrosis ... 41 0.11
AY926594_1(AY926594|pid:none) Canis familiaris ADAM-17 mRNA, par... 41 0.11
(P98158) RecName: Full=Low-density lipoprotein receptor-related ... 41 0.11
BT033001_1(BT033001|pid:none) Drosophila melanogaster IP21817 fu... 41 0.11
AY544583_1(AY544583|pid:none) Paramecium tetraurelia putative GP... 41 0.11
AY313173_1(AY313173|pid:none) Cricetulus griseus tumor necrosis ... 41 0.11
(Q9D5Z7) RecName: Full=Keratin-associated protein 5-2; &AK01478... 41 0.11
A47648(A47648)perlecan homolog unc-52, form 1 precursor - Caenor... 40 0.14
I48952(I48952;S48217) VLDL receptor precursor, long splice form ... 40 0.14
AF514281_1(AF514281|pid:none) Oreochromis aureus vitellogenin re... 40 0.14
C88369(C88369;E88369) protein unc-52 [imported] - Caenorhabditis... 40 0.14
F88369(F88369) protein unc-52 [imported] - Caenorhabditis elegan... 40 0.14
BX510920_1(BX510920|pid:none) Zebrafish DNA sequence from clone ... 40 0.14
Z93375_7(Z93375|pid:none) Caenorhabditis elegans Cosmid C38C6, c... 40 0.14
AL590992_2(AL590992|pid:none) Mouse DNA sequence from clone RP23... 40 0.14
BC013622_1(BC013622|pid:none) Mus musculus very low density lipo... 40 0.14
(P98156) RecName: Full=Very low-density lipoprotein receptor; ... 40 0.14
AL592545_3(AL592545|pid:none) Mouse DNA sequence from clone RP23... 40 0.14
AM746676_2219(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 40 0.14
AJ133651_1(AJ133651|pid:none) Trichoderma harzianum cmp1 gene. 40 0.14
AB363982_1(AB363982|pid:none) Tenebrio molitor mRNA for modular ... 40 0.14
AY862414_1(AY862414|pid:none) Danio rerio laminin alpha 4 mRNA, ... 39 0.15
BC119472_1(BC119472|pid:none) Mus musculus predicted gene, OTTMU... 36 0.18
BC104358_1(BC104358|pid:none) Mus musculus predicted gene, OTTMU... 36 0.18
AL590997_35(AL590997|pid:none) Mouse DNA sequence from clone RP2... 36 0.18
AY466854_1(AY466854|pid:none) Macaca mulatta low density lipopro... 40 0.19
EU152252_1(EU152252|pid:none) Hydra vulgaris notch mRNA, complet... 40 0.19
AC115680_25(AC115680|pid:none) Dictyostelium discoideum chromoso... 40 0.19
AC084165_5(AC084165|pid:none) Arabidopsis thaliana chromosome 1 ... 40 0.19
(Q99088) RecName: Full=Low-density lipoprotein receptor 2; ... 40 0.19
CR925677_676(CR925677|pid:none) Ehrlichia ruminantium str. Garde... 40 0.19
AK131904_1(AK131904|pid:none) Mus musculus adult male tongue cDN... 40 0.19
T23682(T23682) hypothetical protein M02G9.3 - Caenorhabditis ele... 40 0.19
(Q8ILR9) RecName: Full=LRR domain-containing protein PF14_0175; ... 40 0.19
AY331707_1(AY331707|pid:none) Crassostrea virginica metallothion... 40 0.19
AL031744_3(AL031744|pid:none) Plasmodium falciparum DNA from MAL... 40 0.19
A56081(A56081;A26378;A24147)insulin receptor - fruit fly (Drosop... 40 0.19
S57245(S57245)insulin receptor (version 2) - fruit fly (Drosophi... 40 0.19
(Q28832) RecName: Full=Low-density lipoprotein receptor; ... 40 0.19
AE014297_4006(AE014297|pid:none) Drosophila melanogaster chromos... 40 0.24
AB051631_1(AB051631|pid:none) Plasmodium ovale gene for ookinete... 40 0.24
AL022270_3(AL022270|pid:none) Caenorhabditis elegans Cosmid C26G... 40 0.24
(A8MX34) RecName: Full=Putative keratin-associated protein 10-li... 40 0.24
AB177798_1(AB177798|pid:none) Homo sapiens FBN3 gene for fibrill... 40 0.24
AM746676_6052(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 40 0.24
AB177799_1(AB177799|pid:none) Homo sapiens FBN3 gene for fibrill... 40 0.24
AB384635_1(AB384635|pid:none) Synthetic construct DNA, clone: pF... 40 0.24
AY862413_1(AY862413|pid:none) Danio rerio laminin alpha 1 mRNA, ... 40 0.24
(P17053) RecName: Full=G surface protein, allelic form 168; Flag... 40 0.24
(Q75N90) RecName: Full=Fibrillin-3; Flags: Precursor; &AY165863... 40 0.24
U54640_1(U54640|pid:none) Chironomus pallidivittatus 185 kDa sil... 40 0.24
EU973332_1(EU973332|pid:none) Zea mays clone 396882 keratin-asso... 40 0.24
EU975774_1(EU975774|pid:none) Zea mays clone 500142 hypothetical... 40 0.24
AE014297_4009(AE014297|pid:none) Drosophila melanogaster chromos... 40 0.24
AF067952_1(AF067952|pid:none) Sus scrofa low density lipoprotein... 40 0.24
AC124142_6(AC124142|pid:none) Oryza sativa (japonica cultivar-gr... 39 0.32
AY123118_1(AY123118|pid:none) Griffithsia japonica growth factor... 39 0.32
I46412(I46412;S34215) keratin KAP5.4 - sheep &X73434_1(X73434|p... 39 0.32
(P60014) RecName: Full=Keratin-associated protein 10-10; AltName... 39 0.32
AK054663_1(AK054663|pid:none) Homo sapiens cDNA FLJ30101 fis, cl... 39 0.32
AY191413_1(AY191413|pid:none) Drosophila yakuba Notch gene, exon... 39 0.32
DQ131910_1(DQ131910|pid:none) Danio rerio laminin alpha 1 mRNA, ... 39 0.32
EU273942_1(EU273942|pid:none) Amphimedon queenslandica notch mRN... 39 0.32
AF448145_3(AF448145|pid:none) Myxococcus xanthus che3 chemosenso... 39 0.32
AM920429_155(AM920429|pid:none) Penicillium chrysogenum Wisconsi... 39 0.32
(Q8UVG0) RecName: Full=Zinc metalloproteinase-disintegrin beryth... 39 0.41
Y12539_1(Y12539|pid:none) Branchiostoma floridae mRNA for putati... 39 0.41
(Q6L8G8) RecName: Full=Keratin-associated protein 5-7; AltName: ... 39 0.41
(A5A6P5) RecName: Full=Keratin-associated protein 9-2; AltName: ... 39 0.41
AB074976_1(AB074976|pid:none) Plasmodium ovale Pos25 gene for P2... 39 0.41
AL845369_7(AL845369|pid:none) Zebrafish DNA sequence from clone ... 39 0.41
AF418992_1(AF418992|pid:none) Spirometra erinaceieuropaei cytopl... 39 0.41
BC149826_1(BC149826|pid:none) Bos taurus keratin associated prot... 39 0.41
AL590992_1(AL590992|pid:none) Mouse DNA sequence from clone RP23... 39 0.41
AJ005083_1(AJ005083|pid:none) Tribolium castaneum notch gene, pa... 39 0.41
AK009665_1(AK009665|pid:none) Mus musculus adult male tongue cDN... 39 0.41
EU293409_1(EU293409|pid:none) Capra hircus Dlk1 transcript C2 (D... 39 0.41
A30363(A30363)glycoprotein GP330, renal - rat (fragments) 39 0.41
AK049346_1(AK049346|pid:none) Mus musculus ES cells cDNA, RIKEN ... 39 0.41
EU955480_1(EU955480|pid:none) Zea mays clone 1534022 unknown mRNA. 39 0.41
L33417_1(L33417|pid:none) Mus musculus very low density lipoprot... 39 0.41
AF135060_1(AF135060|pid:none) Rattus norvegicus fibrillin-2 mRNA... 39 0.41
AB292672_1(AB292672|pid:none) Danio rerio mRNA for brorin, compl... 39 0.41
L22431_1(L22431|pid:none) Human very low density lipoprotein rec... 39 0.41
CP000769_3416(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 39 0.41
AL450467_2(AL450467|pid:none) Human DNA sequence from clone RP11... 39 0.41
(P98155) RecName: Full=Very low-density lipoprotein receptor; ... 39 0.41
AB074136_1(AB074136|pid:none) Cotesia kariyai iep-1 mRNA for imm... 39 0.41
AB208822_1(AB208822|pid:none) Homo sapiens mRNA for Very low-den... 39 0.41
AB304798_1(AB304798|pid:none) Marsupenaeus japonicus mRNA for pu... 33 0.44
BC148222_1(BC148222|pid:none) Mus musculus cDNA clone IMAGE:4013... 39 0.54
CT025750_1(CT025750|pid:none) Zebrafish DNA sequence from clone ... 39 0.54
AF418991_1(AF418991|pid:none) Spirometra erinaceieuropaei cytopl... 39 0.54
Y10354_1(Y10354|pid:none) D.rerio notch6 mRNA. 39 0.54
AL590997_6(AL590997|pid:none) Mouse DNA sequence from clone RP23... 39 0.54
AF056116_15(AF056116|pid:none) Fugu rubripes serine/threonine ki... 39 0.54
(Q6L8H1) RecName: Full=Keratin-associated protein 5-4; AltName: ... 39 0.54
AF283374_1(AF283374|pid:none) Homo sapiens candidate tumor suppr... 39 0.54
BC172897_1(BC172897|pid:none) Synthetic construct Homo sapiens c... 39 0.54
AK004055_1(AK004055|pid:none) Mus musculus 18-day embryo whole b... 39 0.54
EF584822_1(EF584822|pid:none) Babesia gibsoni strain TWN1 12D3 a... 39 0.54
AM746676_988(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 39 0.54
T29764(T29764)hypothetical protein T21E3.3 - Caenorhabditis eleg... 38 0.71
AL669839_1(AL669839|pid:none) Mouse DNA sequence from clone RP23... 38 0.71
AB076350_1(AB076350|pid:none) Homo sapiens KRTAP18.3 mRNA for ke... 38 0.71
AY540956_1(AY540956|pid:none) Lytechinus variegatus soft fertili... 38 0.71
M33753_1(M33753|pid:none) D.melanogaster crumbs protein mRNA, co... 38 0.71
AB013074_1(AB013074|pid:none) Cyprinus carpio mRNA for integrin ... 38 0.71
AF308671_3(AF308671|pid:none) Cowdria ruminantium clone 21hw hyp... 38 0.71
BC098090_1(BC098090|pid:none) Xenopus tropicalis hypothetical pr... 38 0.71
(P10040) RecName: Full=Protein crumbs; AltName: Full=95F; Flags:... 38 0.71
AL845481_1(AL845481|pid:none) Zebrafish DNA sequence from clone ... 38 0.71
(Q9WVB4) RecName: Full=Slit homolog 3 protein; Short=Sl... 38 0.71
(P60369) RecName: Full=Keratin-associated protein 10-3; AltName:... 38 0.71
BC150780_1(BC150780|pid:none) Mus musculus slit homolog 3 (Droso... 38 0.71
AB255883_1(AB255883|pid:none) Rhyparobia maderae VgR mRNA for vi... 38 0.71
CT033773_2(CT033773|pid:none) Mouse DNA sequence from clone RP23... 38 0.71
AK047014_1(AK047014|pid:none) Mus musculus 10 days neonate cereb... 38 0.71
AL590992_4(AL590992|pid:none) Mouse DNA sequence from clone RP23... 35 0.82
AF499438_1(AF499438|pid:none) Caenorhabditis briggsae notch-like... 38 0.92
BT011063_1(BT011063|pid:none) Drosophila melanogaster LD21010 fu... 38 0.92
DQ229124_1(DQ229124|pid:none) Tenebrio molitor antifreeze protei... 38 0.92
AL844509_613(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 38 0.92
(P26372) RecName: Full=Keratin, ultra high-sulfur matrix protein... 38 0.92
BX649457_7(BX649457|pid:none) Zebrafish DNA sequence from clone ... 38 0.92
DQ177286_1(DQ177286|pid:none) Danio rerio Slit1a (slit1a) mRNA, ... 38 0.92
BT022830_1(BT022830|pid:none) Drosophila melanogaster IP13337 fu... 38 0.92
AE014134_2533(AE014134|pid:none) Drosophila melanogaster chromos... 38 0.92
U20217_1(U20217|pid:none) Mus musculus fibrillin-2 mRNA, partial... 38 0.92
AE014134_2532(AE014134|pid:none) Drosophila melanogaster chromos... 38 0.92
CP000769_3367(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 38 0.92
(Q701N4) RecName: Full=Keratin-associated protein 5-2; AltName: ... 38 0.92
AE014297_4008(AE014297|pid:none) Drosophila melanogaster chromos... 38 0.92
DQ310728_1(DQ310728|pid:none) Xenopus laevis fibrillin mRNA, par... 38 0.92
(Q61555) RecName: Full=Fibrillin-2; Flags: Precursor; &A57278(A... 38 0.92
CR352252_1(CR352252|pid:none) Zebrafish DNA sequence from clone ... 38 0.92
BT001632_1(BT001632|pid:none) Drosophila melanogaster RE38584 fu... 38 0.92
CP001131_1246(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 38 0.92
CP000251_2584(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 38 0.92
AY544165_1(AY544165|pid:none) Paramecium tetraurelia putative GP... 37 1.2
AF007248_1(AF007248|pid:none) Mus musculus mutant fibrillin-1 (F... 37 1.2
AF097183_1(AF097183|pid:none) Cryptosporidium parvum HC-10 gene,... 37 1.2
BC115509_1(BC115509|pid:none) Mus musculus keratin associated pr... 37 1.2
AK137635_1(AK137635|pid:none) Mus musculus adult female vagina c... 37 1.2
CR759822_3(CR759822|pid:none) Zebrafish DNA sequence from clone ... 37 1.2
G89152(G89152) protein C24B5.5 [imported] - Caenorhabditis elega... 37 1.2
(Q8WSW3) RecName: Full=Cadmium metallothionein; AltName: Full=MT... 37 1.2
AF135059_1(AF135059|pid:none) Rattus norvegicus fibrillin-1 mRNA... 37 1.2
AK154429_1(AK154429|pid:none) Mus musculus NOD-derived CD11c +ve... 37 1.2
(Q61554) RecName: Full=Fibrillin-1; Flags: Precursor; &A55624(A... 37 1.2
(P35952) RecName: Full=Low-density lipoprotein receptor; ... 37 1.2
AB287423_1(AB287423|pid:none) Entamoeba dispar igl1 mRNA for int... 37 1.2
(O88307) RecName: Full=Sortilin-related receptor; AltName: Full=... 37 1.2
(P20063) RecName: Full=Low-density lipoprotein receptor; ... 37 1.2
AB015790_1(AB015790|pid:none) Mus musculus mRNA for LR11, comple... 37 1.2
EU434914_1(EU434914|pid:none) Mus musculus isolate MAB1001_9C_10... 37 1.2
AP007155_961(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 37 1.2
AK220196_1(AK220196|pid:none) Mus musculus mRNA for mKIAA4226 pr... 37 1.2
AB201473_1(AB201473|pid:none) Bombyx mori LpR3 mRNA for lipophor... 37 1.2
EU434916_1(EU434916|pid:none) Mus musculus isolate MAB1001_11F_6... 37 1.2
L36118_1(L36118|pid:none) Chiloscyllium plagiosum low-density li... 37 1.2
AK147303_1(AK147303|pid:none) Mus musculus adult male brain UNDE... 37 1.2
(Q09163) RecName: Full=Protein delta homolog 1; Short=D... 37 1.2
AL844547_6(AL844547|pid:none) Mouse DNA sequence from clone RP23... 37 1.2
BC163717_1(BC163717|pid:none) Danio rerio laminin, alpha 4, mRNA... 37 1.2
L12721_1(L12721|pid:none) Mus musculus adipocyte differentiation... 37 1.2
AB052951_1(AB052951|pid:none) Homo sapiens mRNA for SRECRP-1, co... 37 1.2
AF522196_1(AF522196|pid:none) Homo sapiens scavenger receptor ty... 37 1.2
(Q28520) RecName: Full=Vitamin K-dependent protein S; Flags: Pre... 33 1.2
(P98118) RecName: Full=Vitamin K-dependent protein S; Flags: Pre... 33 1.2
S38819(S38819;S37238)plasma protein S - rabbit (fragment) 33 1.2
L31380_1(L31380|pid:none) Macaca mulatta vitamin K dependent pro... 33 1.2
AL591417_4(AL591417|pid:none) Mouse DNA sequence from clone RP23... 37 1.4
T34513(T34513)hypothetical protein ZK783.1 - Caenorhabditis eleg... 30 1.4
AK147329_1(AK147329|pid:none) Mus musculus cDNA, RIKEN full-leng... 33 1.5
AB025413_1(AB025413|pid:none) Mus musculus mRNA for Ten-m4, comp... 33 1.5
(Q3UHK6) RecName: Full=Teneurin-4; Short=Ten-4; AltName... 33 1.5
U13646_1(U13646|pid:none) Caenorhabditis elegans cosmid ZK783, c... 30 1.5
AB209409_1(AB209409|pid:none) Homo sapiens mRNA for low density ... 37 1.6
AY892737_1(AY892737|pid:none) Synthetic construct Homo sapiens c... 37 1.6
AB384938_1(AB384938|pid:none) Synthetic construct DNA, clone: pF... 37 1.6
(P01130) RecName: Full=Low-density lipoprotein receptor; ... 37 1.6
DQ462703_1(DQ462703|pid:none) Bos taurus low density lipoprotein... 37 1.6
BT029727_1(BT029727|pid:none) Drosophila melanogaster IP17596 fu... 37 1.6
AK122376_1(AK122376|pid:none) Mus musculus mRNA for mKIAA0813 pr... 37 1.6
D89711(D89711) protein F40E10.4 [imported] - Caenorhabditis eleg... 37 1.6
AC146569_21(AC146569|pid:none) Medicago truncatula clone mth2-10... 37 1.6
AK074051_1(AK074051|pid:none) Homo sapiens mRNA for FLJ00122 pro... 37 1.6
AGCH(JH0591;A38857;B38857;I50692) agrin precursor - chicken &M9... 37 1.6
AJ295695_1(AJ295695|pid:none) Homo sapiens mRNA for stabilin-2 (... 37 1.6
(O88279) RecName: Full=Slit homolog 1 protein; Short=Sl... 37 1.6
BC057131_1(BC057131|pid:none) Mus musculus slit homolog 1 (Droso... 37 1.6
AY118509_1(AY118509|pid:none) Drosophila melanogaster LD13435 fu... 37 1.6
AF144627_1(AF144627|pid:none) Mus musculus SLIT1 (Slit1) mRNA, c... 37 1.6
(Q80TR4) RecName: Full=Slit homolog 1 protein; Short=Sl... 37 1.6
AB003753_1(AB003753|pid:none) Rattus norvegicus genes for high s... 37 1.6
AF133730_1(AF133730|pid:none) Rattus norvegicus Slit1 mRNA, comp... 37 1.6
AB052958_1(AB052958|pid:none) Homo sapiens mRNA for FELE-2, comp... 37 1.6
AE017341_292(AE017341|pid:none) Cryptococcus neoformans var. neo... 37 1.6
(Q8WWQ8) RecName: Full=Stabilin-2; AltName: Full=Fasciclin, EGF-... 37 1.6
AF217403_1(AF217403|pid:none) Homo sapiens low density lipoprote... 37 1.6
AK297744_1(AK297744|pid:none) Homo sapiens cDNA FLJ60311 complet... 37 1.6
AK298571_1(AK298571|pid:none) Homo sapiens cDNA FLJ59733 complet... 37 1.6
AK095875_1(AK095875|pid:none) Homo sapiens cDNA FLJ38556 fis, cl... 37 1.6
(Q5M9B3) RecName: Full=Integrin beta-like protein 1; Flags: Prec... 37 1.6
(Q03185) RecName: Full=Major surface trophozoite antigen 11; Fla... 37 1.6
BC046744_1(BC046744|pid:none) Xenopus laevis Integrin beta-like ... 37 1.6
AY144581_1(AY144581|pid:none) Penaeus monodon thrombospondin mRN... 34 1.6
BC146617_1(BC146617|pid:none) Xenopus tropicalis odz, odd Oz/ten... 33 1.9
(Q6L8G5) RecName: Full=Keratin-associated protein 5-10; AltName:... 37 2.1
AM746676_9116(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 37 2.1
CP000383_2120(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 37 2.1
AY331704_1(AY331704|pid:none) Crassostrea virginica metallothion... 37 2.1
EU024890_1(EU024890|pid:none) Penaeus monodon vitellogenin recep... 37 2.1
AE014187_212(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 37 2.1
AY805407_1(AY805407|pid:none) Danio rerio notch1b mRNA, complete... 37 2.1
AF159157_1(AF159157|pid:none) Hydra vulgaris head-activator bind... 37 2.1
(P60368) RecName: Full=Keratin-associated protein 10-2; AltName:... 37 2.1
AL035436_2(AL035436|pid:none) Drosophila melanogaster cosmid clo... 37 2.1
M16152_1(M16152|pid:none) Drosophila melanogaster Notch growth f... 37 2.1
AB073214_1(AB073214|pid:none) Rattus norvegicus SLIT1 mRNA for S... 37 2.1
AL034559_42(AL034559|pid:none) Plasmodium falciparum MAL3P7, com... 37 2.1
AE017351_299(AE017351|pid:none) Cryptococcus neoformans var. neo... 37 2.1
FJ039902_1(FJ039902|pid:none) Triticum aestivum DEP1 (DEP1) mRNA... 37 2.1
(Q16787) RecName: Full=Laminin subunit alpha-3; AltName: Full=Ep... 34 2.4
EF444992_1(EF444992|pid:none) Homo sapiens laminin alpha-3 chain... 34 2.4
AY327116_1(AY327116|pid:none) Homo sapiens laminin alpha 3 splic... 34 2.4
(Q6N022) RecName: Full=Teneurin-4; Short=Ten-4; AltName... 33 2.4
(P07225) RecName: Full=Vitamin K-dependent protein S; Flags: Pre... 32 2.6
M15036_1(M15036|pid:none) Human vitamin K-dependent plasma prote... 32 2.6
EF490415_1(EF490415|pid:none) Ciona intestinalis isolate I trans... 36 2.7
EF133884_1(EF133884|pid:none) Alexandrium fundyense strain GT-CA... 36 2.7
AB264317_1(AB264317|pid:none) Dorcus curvidens binodulosus dcbAF... 36 2.7
U25680_1(U25680|pid:none) Rattus norvegicus preadipocyte factor ... 36 2.7
(P35950) RecName: Full=Low-density lipoprotein receptor; ... 36 2.7
AB073215_1(AB073215|pid:none) Rattus norvegicus SLIT1 mRNA for S... 36 2.7
AE014296_2190(AE014296|pid:none) Drosophila melanogaster chromos... 36 2.7
AB126074_1(AB126074|pid:none) Homo sapiens KRTAP5-5 mRNA for ker... 36 2.7
CR380947_51(CR380947|pid:none) Candida glabrata strain CBS138 ch... 36 2.7
BT011026_1(BT011026|pid:none) Drosophila melanogaster RE46519 fu... 36 2.7
QRXLL2(B40388)LDL receptor 2 precursor - African clawed frog 36 2.7
(O97388) RecName: Full=Metallothionein-1; Short=MT-1; C... 36 2.7
AY754881_1(AY754881|pid:none) Giardia muris variant-specific sur... 36 2.7
BC069560_1(BC069560|pid:none) Homo sapiens keratin associated pr... 36 2.7
DQ786775_1(DQ786775|pid:none) Mus musculus FEX2 mRNA, complete c... 36 2.7
EU596506_1(EU596506|pid:none) Rattus norvegicus tenascin C (Tnc)... 36 2.7
DQ149103_1(DQ149103|pid:none) Danio rerio integrin beta1 subunit... 36 2.7
(Q701N2) RecName: Full=Keratin-associated protein 5-5; AltName: ... 36 2.7
(P59222) RecName: Full=Scavenger receptor class F member 2; AltN... 36 2.7
BX537264_1(BX537264|pid:none) Zebrafish DNA sequence from clone ... 36 2.7
AL590997_34(AL590997|pid:none) Mouse DNA sequence from clone RP2... 32 3.0
(O15230) RecName: Full=Laminin subunit alpha-5; Flags: Precursor; 30 3.1
AE014298_1598(AE014298|pid:none) Drosophila melanogaster chromos... 34 3.4
BC162468_1(BC162468|pid:none) Danio rerio jagged 1a, mRNA (cDNA ... 36 3.5
(P46530) RecName: Full=Neurogenic locus notch homolog protein 1;... 36 3.5
(Q8T6B3) RecName: Full=Metallothionein-1; Short=MT-1; ... 36 3.5
AY360448_1(AY360448|pid:none) Bos taurus delta-like protein-like... 36 3.5
(P46023) RecName: Full=G-protein coupled receptor GRL101; Flags:... 36 3.5
AL844506_218(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 36 3.5
AF258795_1(AF258795|pid:none) Tetrahymena pigmentosa copper-indu... 36 3.5
CU138540_8(CU138540|pid:none) Zebrafish DNA sequence from clone ... 36 3.5
AC115592_21(AC115592|pid:none) Dictyostelium discoideum chromoso... 36 3.5
(O35161) RecName: Full=Cadherin EGF LAG seven-pass G-type recept... 36 3.5
BC119785_1(BC119785|pid:none) Mus musculus latent transforming g... 36 3.5
(P60413) RecName: Full=Keratin-associated protein 10-12; AltName... 36 3.5
AY630342_1(AY630342|pid:none) Manduca sexta plasmatocyte-specifi... 36 3.5
AB121210_1(AB121210|pid:none) Marsupenaeus japonicus mjTSPb mRNA... 36 3.5
AL844506_245(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 36 3.5
AY650311_1(AY650311|pid:none) Macaca fascicularis slit 1 mRNA, p... 36 3.5
BC071077_1(BC071077|pid:none) Xenopus laevis suppression of tumo... 36 3.5
S32659(I50660;S32659) integrin beta 2 chain (CD18) - chicken &X... 36 3.5
U17980_1(U17980|pid:none) Giardia lamblia variant-specific surfa... 36 3.5
X56811_1(X56811|pid:none) D.melanogaster Serrate mRNA for EGF-li... 36 3.5
(P18168) RecName: Full=Serrate protein; AltName: Full=Protein be... 36 3.5
AY128478_1(AY128478|pid:none) Drosophila melanogaster RE42104 fu... 36 3.5
S16148(S16148;S16878;A36666)gene serrate protein precursor - fru... 36 3.5
AE014297_4255(AE014297|pid:none) Drosophila melanogaster chromos... 36 3.5
AK295612_1(AK295612|pid:none) Homo sapiens cDNA FLJ54620 complet... 29 4.4
BX883044_5(BX883044|pid:none) Rattus norvegicus chromosome 20, m... 35 4.6
U89335_1(U89335|pid:none) Homo sapiens chromosome 6 notch4 (NOTC... 35 4.6
U40030_3(U40030|pid:none) Caenorhabditis elegans cosmid T13C2, c... 35 4.6
AX045119_1(AX045119|pid:none) Sequence 27 from Patent WO0066730. 35 4.6
AB001074_1(AB001074|pid:none) Caenorhabditis elegans mRNA for la... 35 4.6
(Q9ZSM8) RecName: Full=Histone-lysine N-methyltransferase EZA1; ... 35 4.6
AX045117_1(AX045117|pid:none) Sequence 25 from Patent WO0066730. 35 4.6
AE014296_853(AE014296|pid:none) Drosophila melanogaster chromoso... 35 4.6
AL158158_5(AL158158|pid:none) Human DNA sequence from clone RP11... 35 4.6
AK027870_1(AK027870|pid:none) Homo sapiens cDNA FLJ14964 fis, cl... 35 4.6
AF001308_3(AF001308|pid:none) Arabidopsis thaliana BAC T10M13 fr... 35 4.6
Z70286_4(Z70286|pid:none) Caenorhabditis elegans Cosmid K08C7, c... 35 4.6
BX927239_21(BX927239|pid:none) Human DNA sequence from clone DAM... 35 4.6
AM746676_4695(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 35 4.6
AB385108_1(AB385108|pid:none) Synthetic construct DNA, clone: pF... 35 4.6
DQ224365_1(DQ224365|pid:none) Tenebrio molitor antifreeze protei... 35 4.6
QRRTLD(S03430;S05076;B48908)LDL receptor precursor - rat 35 4.6
(Q9HCU4) RecName: Full=Cadherin EGF LAG seven-pass G-type recept... 35 4.6
AK009035_1(AK009035|pid:none) Mus musculus adult male tongue cDN... 35 4.6
(O88280) RecName: Full=Slit homolog 3 protein; Short=Sl... 35 4.6
CR933878_21(CR933878|pid:none) Human DNA sequence from clone DAM... 35 4.6
EF185126_1(EF185126|pid:none) Corbicula fluminea metallothionein... 35 4.6
AF198615_1(AF198615|pid:none) Neospora caninum microneme protein... 35 4.6
AL034559_35(AL034559|pid:none) Plasmodium falciparum MAL3P7, com... 35 4.6
EU560444_1(EU560444|pid:none) Metaphire formosae metallothionein... 35 4.6
AX133831_1(AX133831|pid:none) Sequence 17 from Patent WO0119856. 35 4.6
DQ229121_1(DQ229121|pid:none) Tenebrio molitor antifreeze protei... 35 4.6
AL662830_12(AL662830|pid:none) Human DNA sequence from clone XXb... 35 4.6
EU734181_1(EU734181|pid:none) Argopecten irradians metallothione... 35 4.6
CU633457_205(CU633457|pid:none) Podospora anserina genomic DNA c... 35 4.6
EF596889_1(EF596889|pid:none) Drosophila simulans strain simB MD... 35 4.6
CR380947_49(CR380947|pid:none) Candida glabrata strain CBS138 ch... 35 4.6
(A8MUX0) RecName: Full=Putative keratin-associated protein 10-li... 35 4.6

>(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor;
&AC116957_28(AC116957|pid:none)
Length = 730

Score = 416 bits (1070), Expect(2) = 0.0
Identities = 195/247 (78%), Positives = 195/247 (78%)
Frame = +1

Query: 484 CDAVAQKITHVPYDTCKGCMSCNPSNGDCEAHNEVCNDFNACTENVCSPVKVGAGVGEXX 663
CDAVAQKITHVPYDTCKGCMSCNPSNGDCEAHNEVCNDFNACTENVCSPVKVGAGVGE
Sbjct: 484 CDAVAQKITHVPYDTCKGCMSCNPSNGDCEAHNEVCNDFNACTENVCSPVKVGAGVGECV 543

Query: 664 XXXXXXXXXXXXDKCKNYLCDSEKGCYETDVVCPDSGNCKVGHCDSKVGCSLKPRVCKSP 843
DKCKNYLCDSEKGCYETDVVCPDSGNCKVGHCDSKVGCSLKPRVCKSP
Sbjct: 544 TTNTTCAPTTNVDKCKNYLCDSEKGCYETDVVCPDSGNCKVGHCDSKVGCSLKPRVCKSP 603

Query: 844 AFCIVAECDETVGCIAFERRCASSNPKCKAGICVNGTTPEEGECESVNYDPKPFICQTXX 1023
AFCIVAECDETVGCIAFERRCASSNPKCKAGICVNGTTPEEGECESVNYDPKPFICQT
Sbjct: 604 AFCIVAECDETVGCIAFERRCASSNPKCKAGICVNGTTPEEGECESVNYDPKPFICQTGA 663

Query: 1024 XXXXXXXXXXXXXXXXXLGIFIYGGKRGYDYWKEXXXXXXXXXXXXXXXXXXXNASENPL 1203
LGIFIYGGKRGYDYWKE NASENPL
Sbjct: 664 IVSTAVIAGVTVAGAVALGIFIYGGKRGYDYWKESRSISMSSAVSSPMYVPSANASENPL 723

Query: 1204 YIPEGEL 1224
YIPEGEL
Sbjct: 724 YIPEGEL 730

Score = 342 bits (877), Expect(2) = 0.0
Identities = 150/152 (98%), Positives = 150/152 (98%)
Frame = +3

Query: 18 NKCQVNSCDKTTGNCKPENLKCPDRSNECLKNTGCDDLTGCKYVSICTDSCDKKGNACVA 197
NKCQVNSCDKTTGNCKPENLKCPDRSNECLKNTGCDDLTGCKYVSICTDSCDKKGNACVA
Sbjct: 315 NKCQVNSCDKTTGNCKPENLKCPDRSNECLKNTGCDDLTGCKYVSICTDSCDKKGNACVA 374

Query: 198 GKCQQKTTSDCAAELDDNSCKVYSCNSTRGGCYSENKCKPDPTQICDVASCDDGACXIKT 377
GKCQQKTTSDCAAELDDNSCKVYSCNSTRGGCYSENKCKPDPTQICDVASCDDGAC IKT
Sbjct: 375 GKCQQKTTSDCAAELDDNSCKVYSCNSTRGGCYSENKCKPDPTQICDVASCDDGACSIKT 434

Query: 378 LPPDECNCGCKPNFCQKSNCVKNPSNNQXECS 473
LPPDECNCGCKPNFCQKSNCVKNPSNNQ ECS
Sbjct: 435 LPPDECNCGCKPNFCQKSNCVKNPSNNQFECS 466

Score = 45.1 bits (105), Expect = 0.006
Identities = 39/135 (28%), Positives = 54/135 (40%), Gaps = 1/135 (0%)
Frame = +3

Query: 36 SCDKTTGNCKPENLKCPDRSNECLKNTGCDDLTGCKYVSICTDSCDKKGNACVAGKCQQK 215
SC+ + G+C+ N C D N C +N C V + G+C
Sbjct: 504 SCNPSNGDCEAHNEVCND-FNACTENV-------CSPVKV----------GAGVGECVTT 545

Query: 216 TTSDCAAELDDNSCKVYSCNSTRGGCYSENKCKPDPTQICDVASCDDG-ACXIKTLPPDE 392
T+ CA + + CK Y C+S + GCY + PD C V CD C +K P
Sbjct: 546 NTT-CAPTTNVDKCKNYLCDSEK-GCYETDVVCPDSGN-CKVGHCDSKVGCSLK---PRV 599

Query: 393 CNCGCKPNFCQKSNC 437
C P FC + C
Sbjct: 600 CK---SPAFCIVAEC 611

Score = 43.5 bits (101), Expect = 0.017
Identities = 47/190 (24%), Positives = 67/190 (35%), Gaps = 14/190 (7%)
Frame = +1

Query: 466 NVLXXXCDAVAQKITHVPYDT--CKGCM--SCNPSNGDCEAHNEVCND-FNACTENVCSP 630
N+ +V + +H+P D C SC+ + G+C+ N C D N C +N
Sbjct: 291 NLAFPDLQSVYKNCSHIPKDCPPANKCQVNSCDKTTGNCKPENLKCPDRSNECLKN---- 346

Query: 631 VKVGAGVGEXXXXXXXXXXXXXXDKCKNYLCDSEKGCYETDVVCP---DSGNCKVGHCDS 801
G + DK K C + K +T C D +CKV C+S
Sbjct: 347 ----TGCDDLTGCKYVSICTDSCDK-KGNACVAGKCQQKTTSDCAAELDDNSCKVYSCNS 401

Query: 802 KVGCSLKPRVCK--SPAFCIVAECDETVGCIAF----ERRCASSNPKCKAGICVNGTTPE 963
G CK C VA CD+ I E C C+ CV +
Sbjct: 402 TRGGCYSENKCKPDPTQICDVASCDDGACSIKTLPPDECNCGCKPNFCQKSNCVKNPSNN 461

Query: 964 EGECESVNYD 993
+ EC + D
Sbjct: 462 QFECSLLPAD 471

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,927,571,507
Number of extensions: 38606807
Number of successful extensions: 103894
Number of sequences better than 10.0: 579
Number of HSP's gapped: 102048
Number of HSP's successfully gapped: 1071
Length of query: 437
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 305
Effective length of database: 623,955,076
Effective search space: 190306298180
Effective search space used: 190306298180
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.55 gvh: 0.38 alm: 0.21 top: 0.93 tms: 0.07 mit: 0.20 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.01 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 1.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

24.0 %: cytoplasmic
20.0 %: nuclear
16.0 %: vesicles of secretory system
12.0 %: mitochondrial
8.0 %: Golgi
8.0 %: endoplasmic reticulum
4.0 %: extracellular, including cell wall
4.0 %: cytoskeletal
4.0 %: plasma membrane

>> prediction for Contig-U12286-1 is cyt

VS (DIR, S) 0
VH (FL, L) 24
VF (FL, S) 2
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0