| Contig-U12255-1 |
| Contig ID |
Contig-U12255-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1007 |
| Chromosome number (1..6, M) |
1 |
| Chromosome length |
4919822 |
| Start point |
2304703 |
| End point |
2305562 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
17 |
| Number of EST |
19 |
| Link to clone list |
U12255 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.29 |
| Homology vs DNA |
Query= Contig-U12255-1 (Contig-U12255-1Q) /CSM_Contig/Contig-U12255-1Q.Seq.d
(1017 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(C91087) Dictyostelium discoideum slug cDNA, clone SSJ530. 918 0.0 2
(C94232) Dictyostelium discoideum slug cDNA, clone SSK570. 914 0.0 2
(C91272) Dictyostelium discoideum slug cDNA, clone SSJ733. 908 0.0 2
(BJ331733) Dictyostelium discoideum cDNA clone:dda36i23, 5' ... 874 0.0 1
(BJ368357) Dictyostelium discoideum cDNA clone:ddc46i12, 5' ... 872 0.0 1
(AU037095) Dictyostelium discoideum slug cDNA, clone SSB421. 480 0.0 2
(BJ382941) Dictyostelium discoideum cDNA clone:ddc46i12, 3' ... 759 0.0 1
(AU037428) Dictyostelium discoideum slug cDNA, clone SSD626. 755 0.0 1
(AU265963) Dictyostelium discoideum vegetative cDNA clone:VS... 716 0.0 2
(C92478) Dictyostelium discoideum slug cDNA, clone SSE621. 724 0.0 1
(AU265964) Dictyostelium discoideum vegetative cDNA clone:VS... 446 0.0 3
(C91158) Dictyostelium discoideum slug cDNA, clone SSJ750. 678 0.0 2
(AU051833) Dictyostelium discoideum slug cDNA, clone SSB119. 575 e-166 2
(AU038382) Dictyostelium discoideum slug cDNA, clone SSH642. 531 e-146 1
(AU072255) Dictyostelium discoideum slug cDNA, clone SSD846. 468 e-127 1
(AU071283) Dictyostelium discoideum slug cDNA, clone SSB119. 466 e-127 1
(AU074050) Dictyostelium discoideum slug cDNA, clone SSJ386. 440 e-119 1
(AU074571) Dictyostelium discoideum slug cDNA, clone SSL284. 331 e-100 2
(AU074550) Dictyostelium discoideum slug cDNA, clone SSL248. 331 e-100 2
(AU038275) Dictyostelium discoideum slug cDNA, clone SSH507. 297 4e-76 1
(AU038611) Dictyostelium discoideum slug cDNA, clone SSL248. 168 3e-37 1
(C90988) Dictyostelium discoideum slug cDNA, clone SSJ386. 74 7e-12 2
(AU072532) Dictyostelium discoideum slug cDNA, clone SSE812. 50 8e-04 2
(EJ163731) 1092344057922 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.20 2
(FC850593) CBHN6396.rev CBHN Metridium senile tentacle Metri... 48 0.65 1
(ES405522) MUT01-L07.y1d-s SHGC-MUT Mytilus californianus cD... 34 1.7 2
(DU859715) 64987 Tomato HindIII BAC Library Solanum lycopers... 36 1.8 2
(AC067737) Homo sapiens chromosome 3 clone RP11-344G20, WORK... 40 1.9 3
(AL844506) Plasmodium falciparum chromosome 7. 36 2.0 11
(AG629044) Macaca fuscata fuscata DNA, clone: MSB2-028L21_F,... 38 2.4 2
(ET387089) S0197K21_T7 CHORI-214 Salmo salar genomic clone S... 46 2.6 1
(EJ686588) 1092955185938 Global-Ocean-Sampling_GS-30-02-01-1... 36 3.7 3
(EJ685660) 1092955174909 Global-Ocean-Sampling_GS-30-02-01-1... 36 4.1 3
(AM441066) Vitis vinifera contig VV78X054294.33, whole genom... 34 5.4 2
(AF527409) Cydia pomonella haplotype A22 12S ribosomal RNA a... 34 5.9 3
(AF527408) Cydia pomonella haplotype A21 12S ribosomal RNA a... 34 5.9 3
(CP000102) Methanosphaera stadtmanae DSM 3091, complete genome. 36 5.9 13
(AF527402) Cydia pomonella haplotype A15 12S ribosomal RNA a... 34 6.0 3
(AF527407) Cydia pomonella haplotype A20 12S ribosomal RNA a... 34 6.1 3
(AF527406) Cydia pomonella haplotype A19 12S ribosomal RNA a... 34 6.2 3
(AF527403) Cydia pomonella haplotype A16 12S ribosomal RNA a... 34 6.2 3
(AF527405) Cydia pomonella haplotype A18 12S ribosomal RNA a... 34 6.3 3
(EK165475) 1095458050205 Global-Ocean-Sampling_GS-31-01-01-1... 32 6.5 2
(DX424620) BE1079_D15_F IASMA L1 HindIII BAC library Vitis v... 34 6.6 2
(CN547994) EST 15632 Green Grape (harvested at 5 p.m.) Pedic... 34 6.7 2
(CT338479) Sus scrofa genomic clone CH242-527A17, genomic su... 42 8.6 2
(CT338515) Sus scrofa genomic clone CH242-527C17, genomic su... 42 8.6 2
(FH615377) CHO_OF4535xl05r1.ab1 CHO_OF4 Nicotiana tabacum ge... 36 9.0 2
>(C91087) Dictyostelium discoideum slug cDNA, clone SSJ530.
Length = 633
Score = 918 bits (463), Expect(2) = 0.0
Identities = 475/479 (99%)
Strand = Plus / Plus
Query: 65 aaagatgagtaatagtggaaaaactttaaagtttttagcaaatagtgtatggagaggttc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 aaagatgagtaatagtggaaaaactttaaagtttttagcaaatagtgtatggagaggttc 68
Query: 125 tttaaatggttctggtatgccaactagtggtggaaatgcatttaaaaaaggtctaccatt 184
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 tttaaatggttctggtatgacaactagtggtggaaatgcatttaaaaaaggtctaccatt 128
Query: 185 agaagtaccatctttagcgagaggtttaccagattcaaaacaagatgaaaataaaactaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 agaagtaccatctttagcgagaggtttaccagattcaaaacaagatgaaaataaaactaa 188
Query: 245 ccctgaagaacttgtagccgctgcacatagtgcttgttttactatgactttaagtgctat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ccctgaagaacttgtagccgctgcacatagtgcttgttttactatgactttaagtgctat 248
Query: 305 tttaggtgcacataagttttcaccaagggaaatagatcccaaaggaactttaacattgga 364
|||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 249 tttaggtgcacataagttatcaccaaaggaaatagataccaaaggaactttaacattgga 308
Query: 365 aaaaagaccagatggtttcaaagtttcaagtattcatttaacttgtagtggaaatgtacc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aaaaagaccagatggtttcaaagtttcaagtattcatttaacttgtagtggaaatgtacc 368
Query: 425 aggtattgatgaaaataaattcaaagaatatgccaacatggcaaaaaagaattgtccaat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aggtattgatgaaaataaattcaaagaatatgccaacatggcaaaaaagaattgtccaat 428
Query: 485 gtcaaagttatttaataataattgtgatatttcattagatgcaaaattagtttaggtct 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gtcaaagttatttaataataattgtgatatttcattagatgcaaaattagtttaggtct 487
Score = 50.1 bits (25), Expect(2) = 0.0
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 654 ataataataaatattaatttcaaat 678
|||||||||||||||||||||||||
Sbjct: 597 ataataataaatattaatttcaaat 621
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 772,282,607
Number of extensions: 49604523
Number of successful extensions: 4335099
Number of sequences better than 10.0: 48
Length of query: 1017
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 993
Effective length of database: 97,308,875,965
Effective search space: 96627713833245
Effective search space used: 96627713833245
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 2 |
| Homology vs Protein |
Query= Contig-U12255-1 (Contig-U12255-1Q) /CSM_Contig/Contig-U12255-1Q.Seq.d
(1017 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CP000949_107(CP000949|pid:none) Pseudomonas putida W619, complet... 106 1e-21
CP001280_3121(CP001280|pid:none) Methylocella silvestris BL2, co... 105 2e-21
CP000250_1419(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 103 7e-21
BX572606_183(BX572606|pid:none) Rhodopseudomonas palustris CGA00... 103 1e-20
A83639(A83639) osmotically inducible protein OsmC PA0059 [import... 103 1e-20
CP001096_4602(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 101 5e-20
CU207211_1527(CU207211|pid:none) Herminiimonas arsenicoxydans ch... 100 6e-20
CP000386_140(CP000386|pid:none) Rubrobacter xylanophilus DSM 994... 100 8e-20
CP000744_59(CP000744|pid:none) Pseudomonas aeruginosa PA7, compl... 100 8e-20
CP000103_1532(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 99 2e-19
AP009384_1807(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 99 2e-19
CP001074_3913(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 99 3e-19
CP000383_2223(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 97 7e-19
CP001032_143(CP001032|pid:none) Opitutus terrae PB90-1, complete... 96 2e-18
CP000133_3641(CP000133|pid:none) Rhizobium etli CFN 42, complete... 96 2e-18
AM889285_3229(AM889285|pid:none) Gluconacetobacter diazotrophicu... 96 2e-18
CP001196_706(CP001196|pid:none) Oligotropha carboxidovorans OM5 ... 96 2e-18
CP000285_1149(CP000285|pid:none) Chromohalobacter salexigens DSM... 96 3e-18
CP001016_1958(CP001016|pid:none) Beijerinckia indica subsp. indi... 95 4e-18
AM236080_4228(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 95 4e-18
CP000009_1929(CP000009|pid:none) Gluconobacter oxydans 621H, com... 95 4e-18
CP001189_3061(CP001189|pid:none) Gluconacetobacter diazotrophicu... 94 8e-18
BA000040_6262(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 92 2e-17
CP000075_40(CP000075|pid:none) Pseudomonas syringae pv. syringae... 91 5e-17
CP001276_547(CP001276|pid:none) Thermomicrobium roseum DSM 5159 ... 91 6e-17
CP001114_1778(CP001114|pid:none) Deinococcus deserti VCD115, com... 90 1e-16
CP000634_381(CP000634|pid:none) Agrobacterium vitis S4 chromosom... 90 1e-16
CP000143_2191(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c... 90 1e-16
CP001298_2450(CP001298|pid:none) Methylobacterium chloromethanic... 90 1e-16
CP000577_2221(CP000577|pid:none) Rhodobacter sphaeroides ATCC 17... 90 1e-16
CP001029_2227(CP001029|pid:none) Methylobacterium populi BJ001, ... 89 2e-16
CP000908_2270(CP000908|pid:none) Methylobacterium extorquens PA1... 88 4e-16
CP000271_1843(CP000271|pid:none) Burkholderia xenovorans LB400 c... 88 5e-16
AE008922_2698(AE008922|pid:none) Xanthomonas campestris pv. camp... 87 9e-16
CP001053_1448(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 87 9e-16
AM039952_3060(AM039952|pid:none) Xanthomonas campestris pv. vesi... 87 1e-15
CP000473_3838(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 86 2e-15
CP000076_43(CP000076|pid:none) Pseudomonas fluorescens Pf-5, com... 86 2e-15
AP011115_4342(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 86 2e-15
CP001341_1588(CP001341|pid:none) Arthrobacter chlorophenolicus A... 86 2e-15
CP000512_8(CP000512|pid:none) Acidovorax citrulli AAC00-1, compl... 86 3e-15
CP000157_2814(CP000157|pid:none) Erythrobacter litoralis HTCC259... 86 3e-15
CP000388_737(CP000388|pid:none) Pseudoalteromonas atlantica T6c,... 85 4e-15
CP001103_3280(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 85 4e-15
CP000529_3638(CP000529|pid:none) Polaromonas naphthalenivorans C... 85 4e-15
AE013598_1406(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 84 6e-15
AM743169_1103(AM743169|pid:none) Stenotrophomonas maltophilia K2... 83 2e-14
AL939128_52(AL939128|pid:none) Streptomyces coelicolor A3(2) com... 83 2e-14
CP000094_97(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, co... 83 2e-14
BA000030_1868(BA000030|pid:none) Streptomyces avermitilis MA-468... 82 2e-14
AP008957_652(AP008957|pid:none) Rhodococcus erythropolis PR4 DNA... 82 2e-14
AP006618_427(AP006618|pid:none) Nocardia farcinica IFM 10152 DNA... 82 4e-14
CU207366_1525(CU207366|pid:none) Gramella forsetii KT0803 comple... 82 4e-14
CP000159_1271(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 82 4e-14
CU468135_2395(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 82 4e-14
CP000454_1602(CP000454|pid:none) Arthrobacter sp. FB24, complete... 81 5e-14
BA000012_3274(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 81 5e-14
BX950851_2198(BX950851|pid:none) Erwinia carotovora subsp. atros... 80 9e-14
CP000555_3263(CP000555|pid:none) Methylibium petroleiphilum PM1,... 80 1e-13
CP000034_1500(CP000034|pid:none) Shigella dysenteriae Sd197, com... 80 1e-13
CU928158_1431(CU928158|pid:none) Escherichia fergusonii ATCC 354... 80 1e-13
(P0C0L2) RecName: Full=Peroxiredoxin osmC; EC=1.11.1.15... 80 1e-13
AE014075_1856(AE014075|pid:none) Escherichia coli CFT073, comple... 80 1e-13
CP001635_3618(CP001635|pid:none) Variovorax paradoxus S110 chrom... 80 1e-13
CP000539_3995(CP000539|pid:none) Acidovorax sp. JS42, complete g... 80 1e-13
CP000036_1455(CP000036|pid:none) Shigella boydii Sb227, complete... 79 3e-13
AE000513_1509(AE000513|pid:none) Deinococcus radiodurans R1 chro... 79 3e-13
CP000230_579(CP000230|pid:none) Rhodospirillum rubrum ATCC 11170... 78 4e-13
CP000038_1540(CP000038|pid:none) Shigella sonnei Ss046, complete... 77 7e-13
AP009493_1460(AP009493|pid:none) Streptomyces griseus subsp. gri... 77 1e-12
AM420293_6775(AM420293|pid:none) Saccharopolyspora erythraea NRR... 77 1e-12
AD0673(AD0673) osmotically inducible protein C [imported] - Salm... 77 1e-12
CP000750_855(CP000750|pid:none) Kineococcus radiotolerans SRS302... 76 2e-12
AP008226_1625(AP008226|pid:none) Thermus thermophilus HB8 genomi... 76 2e-12
AE017221_1255(AE017221|pid:none) Thermus thermophilus HB27, comp... 76 2e-12
CP000425_49(CP000425|pid:none) Lactococcus lactis subsp. cremori... 75 3e-12
AM406671_77(AM406671|pid:none) Lactococcus lactis subsp. cremori... 75 5e-12
CP000884_3877(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 73 1e-11
CP000489_918(CP000489|pid:none) Paracoccus denitrificans PD1222 ... 68 4e-10
CP000088_695(CP000088|pid:none) Thermobifida fusca YX, complete ... 68 6e-10
CP000481_1604(CP000481|pid:none) Acidothermus cellulolyticus 11B... 66 2e-09
AE016822_1295(AE016822|pid:none) Leifsonia xyli subsp. xyli str.... 65 3e-09
CP001618_2217(CP001618|pid:none) Beutenbergia cavernae DSM 12333... 64 6e-09
(Q8CMV4) RecName: Full=Organic hydroperoxide resistance protein-... 61 5e-08
(Q5HKS7) RecName: Full=Organic hydroperoxide resistance protein-... 61 5e-08
CP000509_1341(CP000509|pid:none) Nocardioides sp. JS614, complet... 60 9e-08
AP008957_5940(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 60 1e-07
AE017333_1327(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 60 1e-07
CP001615_2543(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 59 2e-07
AE007869_830(AE007869|pid:none) Agrobacterium tumefaciens str. C... 56 2e-06
FP236842_3612(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 56 2e-06
CU468135_3401(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 55 3e-06
CP000813_1197(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 54 7e-06
(P80242) RecName: Full=Organic hydroperoxide resistance protein ... 54 7e-06
CP001111_224(CP001111|pid:none) Stenotrophomonas maltophilia R55... 54 1e-05
CP000826_130(CP000826|pid:none) Serratia proteamaculans 568, com... 54 1e-05
(P70736) RecName: Full=Uncharacterized protein ACIAD3023; AltNam... 54 1e-05
EU327989_24(EU327989|pid:none) Hydrogenophaga sp. PL2G6 class I ... 53 2e-05
CP000560_1210(CP000560|pid:none) Bacillus amyloliquefaciens FZB4... 53 2e-05
AY588239_1(AY588239|pid:none) Lactobacillus sakei organic hydrop... 53 2e-05
CP000813_1195(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 52 3e-05
AM260480_152(AM260480|pid:none) Ralstonia eutropha H16 chromosom... 52 3e-05
AB1720(AB1720) hypothetical protein homolog lin2302 [imported] -... 52 3e-05
CP000316_614(CP000316|pid:none) Polaromonas sp. JS666, complete ... 52 4e-05
AM902716_3198(AM902716|pid:none) Bordetella petrii strain DSM 12... 52 4e-05
AM263198_2216(AM263198|pid:none) Listeria welshimeri serovar 6b ... 52 4e-05
(Q2YWK0) RecName: Full=Organic hydroperoxide resistance protein-... 51 6e-05
(O34762) RecName: Full=Organic hydroperoxide resistance protein ... 51 6e-05
CP000271_184(CP000271|pid:none) Burkholderia xenovorans LB400 ch... 51 7e-05
CP000680_2611(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 51 7e-05
AP007255_3303(AP007255|pid:none) Magnetospirillum magneticum AMB... 51 7e-05
(Q2FIJ2) RecName: Full=Organic hydroperoxide resistance protein-... 51 7e-05
CP000512_4194(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 50 1e-04
CP000113_637(CP000113|pid:none) Myxococcus xanthus DK 1622, comp... 50 1e-04
AP008229_4195(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M... 50 1e-04
AE013598_4358(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 50 1e-04
AE017262_2209(AE017262|pid:none) Listeria monocytogenes str. 4b ... 50 1e-04
AE004091_2851(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 50 2e-04
CU633750_161(CU633750|pid:none) Cupriavidus taiwanensis str. LMG... 50 2e-04
AY657290_1(AY657290|pid:none) Synthetic construct Peudomonas aer... 50 2e-04
CP000884_1193(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 50 2e-04
CP001620_179(CP001620|pid:none) Corynebacterium kroppenstedtii D... 50 2e-04
AE008692_693(AE008692|pid:none) Zymomonas mobilis subsp. mobilis... 50 2e-04
CP000749_417(CP000749|pid:none) Marinomonas sp. MWYL1, complete ... 50 2e-04
CP001638_752(CP001638|pid:none) Geobacillus sp. WCH70, complete ... 49 2e-04
CP000091_2083(CP000091|pid:none) Ralstonia eutropha JMP134 chrom... 49 2e-04
CP000783_3304(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 49 2e-04
CP000304_168(CP000304|pid:none) Pseudomonas stutzeri A1501, comp... 49 3e-04
AM039952_290(AM039952|pid:none) Xanthomonas campestris pv. vesic... 49 3e-04
AE008918_410(AE008918|pid:none) Brucella melitensis 16M chromoso... 49 3e-04
CP000250_4561(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 49 3e-04
CP000560_1212(CP000560|pid:none) Bacillus amyloliquefaciens FZB4... 49 3e-04
CP000094_2462(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 49 4e-04
CP000653_515(CP000653|pid:none) Enterobacter sp. 638, complete g... 49 4e-04
CP000675_2089(CP000675|pid:none) Legionella pneumophila str. Cor... 49 4e-04
CP000521_599(CP000521|pid:none) Acinetobacter baumannii ATCC 179... 48 5e-04
(Q6GB28) RecName: Full=Organic hydroperoxide resistance protein-... 48 5e-04
AM286415_3927(AM286415|pid:none) Yersinia enterocolitica subsp. ... 48 5e-04
CU695240_618(CU695240|pid:none) Ralstonia solanacearum strain Mo... 48 5e-04
AE014292_846(AE014292|pid:none) Brucella suis 1330 chromosome II... 48 5e-04
CP000438_2168(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 48 5e-04
AE006469_1291(AE006469|pid:none) Sinorhizobium meliloti 1021 pla... 48 5e-04
CP001186_4495(CP001186|pid:none) Bacillus cereus G9842, complete... 48 6e-04
CP001172_2887(CP001172|pid:none) Acinetobacter baumannii AB307-0... 48 6e-04
AP009384_2977(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 48 6e-04
CP001074_1242(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 48 6e-04
CP001191_805(CP001191|pid:none) Rhizobium leguminosarum bv. trif... 48 6e-04
CP001068_3398(CP001068|pid:none) Ralstonia pickettii 12J chromos... 48 6e-04
CR628336_1958(CR628336|pid:none) Legionella pneumophila str. Par... 47 0.001
CP000155_1299(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 47 0.001
CR628337_1959(CR628337|pid:none) Legionella pneumophila str. Len... 47 0.001
CP001389_705(CP001389|pid:none) Rhizobium sp. NGR234, complete g... 47 0.001
AM420293_184(AM420293|pid:none) Saccharopolyspora erythraea NRRL... 47 0.001
CT573326_1428(CT573326|pid:none) Pseudomonas entomophila str. L4... 47 0.001
AP009484_51(AP009484|pid:none) Macrococcus caseolyticus JCSC5402... 46 0.002
AM236080_1312(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 46 0.002
CP000926_1425(CP000926|pid:none) Pseudomonas putida GB-1, comple... 46 0.002
AM167904_2443(AM167904|pid:none) Bordetella avium 197N complete ... 46 0.002
CP000817_502(CP000817|pid:none) Lysinibacillus sphaericus C3-41,... 46 0.002
AE016877_4278(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 46 0.002
CP000150_1140(CP000150|pid:none) Burkholderia sp. 383 chromosome... 46 0.002
CP001177_4407(CP001177|pid:none) Bacillus cereus AH187, complete... 46 0.002
AE016853_1731(AE016853|pid:none) Pseudomonas syringae pv. tomato... 46 0.002
EU039867_7(EU039867|pid:none) Actinobacillus pleuropneumoniae st... 45 0.003
CP000616_1103(CP000616|pid:none) Burkholderia vietnamiensis G4 c... 45 0.003
CP000949_1468(CP000949|pid:none) Pseudomonas putida W619, comple... 45 0.003
AM747722_86(AM747722|pid:none) Burkholderia cenocepacia J2315 ch... 45 0.003
CP000411_1679(CP000411|pid:none) Oenococcus oeni PSU-1, complete... 45 0.003
CP000820_13(CP000820|pid:none) Frankia sp. EAN1pec, complete gen... 45 0.003
CP001157_1476(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 45 0.003
AL939114_205(AL939114|pid:none) Streptomyces coelicolor A3(2) co... 45 0.003
CP000712_3802(CP000712|pid:none) Pseudomonas putida F1, complete... 45 0.003
AP009153_3674(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 45 0.003
AP009152_2253(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ... 45 0.004
CP000380_285(CP000380|pid:none) Burkholderia cenocepacia AU 1054... 45 0.004
CP000943_4016(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 45 0.004
CP000133_1156(CP000133|pid:none) Rhizobium etli CFN 42, complete... 45 0.004
(Q49W40) RecName: Full=Organic hydroperoxide resistance protein-... 45 0.004
CP000633_882(CP000633|pid:none) Agrobacterium vitis S4 chromosom... 45 0.004
CP000903_4203(CP000903|pid:none) Bacillus weihenstephanensis KBA... 45 0.004
AE015929_1398(AE015929|pid:none) Staphylococcus epidermidis ATCC... 45 0.005
CP000744_2279(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 45 0.005
CP000271_823(CP000271|pid:none) Burkholderia xenovorans LB400 ch... 45 0.005
CR931997_1993(CR931997|pid:none) Corynebacterium jeikeium K411 c... 45 0.005
AF395877_1(AF395877|pid:none) Actinobacillus pleuropneumoniae or... 45 0.005
CP000085_595(CP000085|pid:none) Burkholderia thailandensis E264 ... 44 0.007
CP000875_1732(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 44 0.007
BX571856_1762(BX571856|pid:none) Staphylococcus aureus subsp. au... 44 0.007
AP009484_1393(AP009484|pid:none) Macrococcus caseolyticus JCSC54... 44 0.007
CP000738_573(CP000738|pid:none) Sinorhizobium medicae WSM419, co... 44 0.007
BA000028_1498(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 44 0.007
AP009387_102(AP009387|pid:none) Burkholderia multivorans ATCC 17... 44 0.009
CP001027_196(CP001027|pid:none) Burkholderia ambifaria MC40-6 ch... 44 0.009
BA000033_1664(BA000033|pid:none) Staphylococcus aureus subsp. au... 44 0.009
AP009386_439(AP009386|pid:none) Burkholderia multivorans ATCC 17... 44 0.009
AL591688_965(AL591688|pid:none) Sinorhizobium meliloti 1021 comp... 44 0.009
AP006716_1202(AP006716|pid:none) Staphylococcus haemolyticus JCS... 44 0.009
AE009442_992(AE009442|pid:none) Xylella fastidiosa Temecula1, co... 44 0.012
CP001504_47(CP001504|pid:none) Burkholderia glumae BGR1 chromoso... 44 0.012
CP000817_3072(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 44 0.012
AE000513_1818(AE000513|pid:none) Deinococcus radiodurans R1 chro... 44 0.012
CP000494_3054(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 44 0.012
CP000076_4204(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 44 0.012
CP001027_952(CP001027|pid:none) Burkholderia ambifaria MC40-6 ch... 44 0.012
CP001196_586(CP001196|pid:none) Oligotropha carboxidovorans OM5 ... 44 0.012
CP000941_1093(CP000941|pid:none) Xylella fastidiosa M12, complet... 43 0.015
AP009493_6917(AP009493|pid:none) Streptomyces griseus subsp. gri... 43 0.015
CP000094_3992(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 43 0.020
CP000774_2241(CP000774|pid:none) Parvibaculum lavamentivorans DS... 43 0.020
CP000011_292(CP000011|pid:none) Burkholderia mallei ATCC 23344 c... 43 0.020
AL939112_141(AL939112|pid:none) Streptomyces coelicolor A3(2) co... 43 0.020
CP001191_2030(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 43 0.020
CP000441_14(CP000441|pid:none) Burkholderia ambifaria AMMD chrom... 43 0.020
CP000356_80(CP000356|pid:none) Sphingopyxis alaskensis RB2256, c... 43 0.020
CP000781_62(CP000781|pid:none) Xanthobacter autotrophicus Py2, c... 43 0.020
AP006627_1777(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 43 0.020
CP001025_1619(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 43 0.020
AM295250_1318(AM295250|pid:none) Staphylococcus carnosus subsp. ... 42 0.026
CP000555_58(CP000555|pid:none) Methylibium petroleiphilum PM1, c... 42 0.026
AP008955_5774(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 42 0.026
CP000615_918(CP000615|pid:none) Burkholderia vietnamiensis G4 ch... 42 0.026
CP000442_160(CP000442|pid:none) Burkholderia ambifaria AMMD chro... 42 0.034
CP001635_4376(CP001635|pid:none) Variovorax paradoxus S110 chrom... 42 0.034
CR378678_276(CR378678|pid:none) Photobacterium profundum SS9 chr... 42 0.045
CP000151_1694(CP000151|pid:none) Burkholderia sp. 383 chromosome... 42 0.045
CP000269_3332(CP000269|pid:none) Janthinobacterium sp. Marseille... 42 0.045
CP000699_2936(CP000699|pid:none) Sphingomonas wittichii RW1, com... 42 0.045
(Q49WG0) RecName: Full=Organic hydroperoxide resistance protein-... 41 0.058
B64250(B64250) osmotically inducible protein osmC homolog - Myco... 41 0.058
CP000091_1651(CP000091|pid:none) Ralstonia eutropha JMP134 chrom... 41 0.058
CP000384_4866(CP000384|pid:none) Mycobacterium sp. MCS, complete... 41 0.076
CP000388_100(CP000388|pid:none) Pseudoalteromonas atlantica T6c,... 41 0.076
CU633750_118(CU633750|pid:none) Cupriavidus taiwanensis str. LMG... 41 0.076
CP000613_811(CP000613|pid:none) Rhodospirillum centenum SW, comp... 40 0.099
CP000613_2119(CP000613|pid:none) Rhodospirillum centenum SW, com... 40 0.099
CP000927_771(CP000927|pid:none) Caulobacter sp. K31, complete ge... 40 0.099
CP000152_2226(CP000152|pid:none) Burkholderia sp. 383 chromosome... 40 0.099
CP000489_1059(CP000489|pid:none) Paracoccus denitrificans PD1222... 40 0.099
CR954247_174(CR954247|pid:none) Pseudoalteromonas haloplanktis s... 40 0.099
CP000378_1214(CP000378|pid:none) Burkholderia cenocepacia AU 105... 40 0.13
AP008937_1711(AP008937|pid:none) Lactobacillus fermentum IFO 395... 40 0.13
AM747720_1760(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 40 0.13
CP000927_1299(CP000927|pid:none) Caulobacter sp. K31, complete g... 40 0.13
AE005176_382(AE005176|pid:none) Lactococcus lactis subsp. lactis... 40 0.13
CU458896_913(CU458896|pid:none) Mycobacterium abscessus chromoso... 40 0.13
CU914166_1358(CU914166|pid:none) Ralstonia solanacearum strain I... 40 0.17
BX572606_90(BX572606|pid:none) Rhodopseudomonas palustris CGA009... 40 0.17
CP000958_1667(CP000958|pid:none) Burkholderia cenocepacia MC0-3 ... 40 0.17
CP000094_2262(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 40 0.17
CP000685_3976(CP000685|pid:none) Flavobacterium johnsoniae UW101... 40 0.17
CP001103_3115(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 40 0.17
AM181176_1676(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 39 0.22
CP000442_220(CP000442|pid:none) Burkholderia ambifaria AMMD chro... 39 0.22
CP000442_216(CP000442|pid:none) Burkholderia ambifaria AMMD chro... 39 0.22
CP000323_1812(CP000323|pid:none) Psychrobacter cryohalolentis K5... 39 0.22
CP001298_2580(CP001298|pid:none) Methylobacterium chloromethanic... 39 0.22
CP000359_443(CP000359|pid:none) Deinococcus geothermalis DSM 113... 39 0.22
CP000133_2373(CP000133|pid:none) Rhizobium etli CFN 42, complete... 39 0.29
CP000821_1384(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 39 0.29
CP001635_4908(CP001635|pid:none) Variovorax paradoxus S110 chrom... 39 0.29
CP000472_4120(CP000472|pid:none) Shewanella piezotolerans WP3, c... 39 0.38
CP000394_67(CP000394|pid:none) Granulibacter bethesdensis CGDNIH... 39 0.38
BX927148_27(BX927148|pid:none) Corynebacterium glutamicum ATCC 1... 39 0.38
CP001069_952(CP001069|pid:none) Ralstonia pickettii 12J chromoso... 39 0.38
CP000740_483(CP000740|pid:none) Sinorhizobium medicae WSM419 pla... 39 0.38
AE005673_912(AE005673|pid:none) Caulobacter crescentus CB15, com... 39 0.38
AP009044_38(AP009044|pid:none) Corynebacterium glutamicum R DNA,... 38 0.49
CP001472_1757(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 38 0.49
CP000230_476(CP000230|pid:none) Rhodospirillum rubrum ATCC 11170... 38 0.49
CP001074_2470(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 38 0.64
AM942444_1882(AM942444|pid:none) Corynebacterium urealyticum DSM... 38 0.64
CP000750_3295(CP000750|pid:none) Kineococcus radiotolerans SRS30... 37 0.84
AP006627_2110(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 37 0.84
CP001022_527(CP001022|pid:none) Exiguobacterium sibiricum 255-15... 37 0.84
CP001628_2001(CP001628|pid:none) Micrococcus luteus NCTC 2665, c... 37 0.84
AE003853_988(AE003853|pid:none) Vibrio cholerae O1 biovar eltor ... 37 1.1
BA000032_1681(BA000032|pid:none) Vibrio parahaemolyticus RIMD 22... 37 1.1
BA000040_735(BA000040|pid:none) Bradyrhizobium japonicum USDA 11... 37 1.1
CP001196_1706(CP001196|pid:none) Oligotropha carboxidovorans OM5... 37 1.1
CP001027_44(CP001027|pid:none) Burkholderia ambifaria MC40-6 chr... 37 1.4
CP001615_1916(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 37 1.4
AY541809_8(AY541809|pid:none) Acinetobacter baumannii plasmid pM... 37 1.4
CP000510_2184(CP000510|pid:none) Psychromonas ingrahamii 37, com... 37 1.4
CP000606_1241(CP000606|pid:none) Shewanella loihica PV-4, comple... 37 1.4
AL646053_326(AL646053|pid:none) Ralstonia solanacearum GMI1000 m... 37 1.4
FM992695_872(FM992695|pid:none) Candida dubliniensis CD36 chromo... 37 1.4
CP000353_1(CP000353|pid:none) Ralstonia metallidurans CH34 megap... 37 1.4
AP008934_1041(AP008934|pid:none) Staphylococcus saprophyticus su... 37 1.4
CP000423_613(CP000423|pid:none) Lactobacillus casei ATCC 334, co... 36 1.9
CP000961_1503(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 36 1.9
CP000753_3453(CP000753|pid:none) Shewanella baltica OS185, compl... 36 2.4
CP000656_5145(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 36 2.4
CP000813_1600(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 36 2.4
AY993941_8(AY993941|pid:none) Microbacterium arborescens strain ... 36 2.4
CU234118_100(CU234118|pid:none) Bradyrhizobium sp. ORS278,comple... 36 2.4
AE017283_570(AE017283|pid:none) Propionibacterium acnes KPA17120... 35 3.2
BA000030_3617(BA000030|pid:none) Streptomyces avermitilis MA-468... 35 3.2
AE016823_3298(AE016823|pid:none) Leptospira interrogans serovar ... 35 4.2
CR382139_271(CR382139|pid:none) Debaryomyces hansenii strain CBS... 35 4.2
CP000431_4843(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 35 4.2
CP000141_1069(CP000141|pid:none) Carboxydothermus hydrogenoforma... 35 5.4
CP001133_371(CP001133|pid:none) Vibrio fischeri MJ11 chromosome ... 35 5.4
CP001052_2286(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 35 5.4
CP000133_3863(CP000133|pid:none) Rhizobium etli CFN 42, complete... 35 5.4
AM711867_725(AM711867|pid:none) Clavibacter michiganensis subsp.... 34 7.1
CP000021_337(CP000021|pid:none) Vibrio fischeri ES114 chromosome... 34 7.1
AE017333_766(AE017333|pid:none) Bacillus licheniformis DSM 13, c... 34 7.1
CP001574_33(CP001574|pid:none) Micromonas sp. RCC299 chromosome ... 34 9.3
AB254080_17(AB254080|pid:none) Streptomyces kanamyceticus kanamy... 34 9.3
CP001022_2910(CP001022|pid:none) Exiguobacterium sibiricum 255-1... 34 9.3
>CP000949_107(CP000949|pid:none) Pseudomonas putida W619, complete
genome.
Length = 141
Score = 106 bits (265), Expect = 1e-21
Identities = 60/147 (40%), Positives = 86/147 (58%), Gaps = 1/147 (0%)
Frame = +3
Query: 90 LKFLANSVWRGSL-NGSGMPTSGGNAFKKGLPLEVPSLARGLPDSKQDENKTNPEELVAA 266
+K A+++W+G L +G G+ ++ A K+ P + G P TNPEEL+ A
Sbjct: 1 MKKTASAIWQGGLKDGKGVISTESGALKQN-PYGFNTRFEGSPG-------TNPEELIGA 52
Query: 267 AHSACFTMTLSAILGAHKFSPREIDPKGTLTLEKRPDGFKVSSIHLTCSGNVPGIDENKF 446
AH+ CF+M LS +LG +P ID +TLEK+PDGF ++++HL VPG E +F
Sbjct: 53 AHAGCFSMALSMMLGEAGLTPDRIDTIAEVTLEKQPDGFAITAVHLVLKAKVPGASEAQF 112
Query: 447 KEYANMAKKNCPMSKLFNNNCDISLDA 527
+ AN AK CP+SK+ N ISLDA
Sbjct: 113 LDIANKAKAGCPVSKVL--NAKISLDA 137
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,000,160,868
Number of extensions: 18531204
Number of successful extensions: 46985
Number of sequences better than 10.0: 310
Number of HSP's gapped: 46789
Number of HSP's successfully gapped: 310
Length of query: 339
Length of database: 1,051,180,864
Length adjustment: 129
Effective length of query: 210
Effective length of database: 633,664,753
Effective search space: 133069598130
Effective search space used: 133069598130
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
1 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
1 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
14 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
1 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |