Contig-U12227-1
Contig ID Contig-U12227-1
Contig update 2002.12.18
Contig sequence
>Contig-U12227-1 (Contig-U12227-1Q) /CSM_Contig/Contig-U12227-1Q.Seq.d
AAAAAAAAACAAAAAAACCATATTAATATCATCACAGTATATAATCAAAA
TTACTGTTAATAATTAAATCACATTACCTAAACACTACTACAACTATTAT
ATATCGAATAATAATAGTTTAAACTTGTATCATATATAAATTTTTTAATT
TTTTTTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTATTCAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAGAAAACATTGTTTATTT-------
---GTACAAATAAAAAAAAAAAATAATAAAATAAAAAAATAAATAAATAA
ATAAAACAATTCCAATAGTAAAAAGTCATAATCAAAAAAAAATAATCAAA
CACGCACAGCAAAAAAAATCAAAACTTTATACATATCCTTTTTACTTATA
GAAAGCCATGTCAGTTTCAAATGAATATAAATTAGTTGTTATGGGTGGTG
GTGGTGTTGGTAAGAGTGCACTTACTATCCAATTTATCCAAAATCACTTT
ATTGAGGAATACGATCCAACAATAGAGGACAGTTATCGTAGACAATGTCA
AGTCGATGAAGATACTTGTTTATTAGATATTTTAGATACTGCAGGTCAAG
ATGATTACAGTGCTATGAGAGACCAATATATGCGTACAGGTCAAGGTTTC
TTATGTGTTTATGATGTAACATCCAGAACTTCTTTTGAAGAAATTAATGT
TGTTAGAGAACAAATCATTAGAGTAAAAGATAATGATAAAGTTCCAATTG
TATTAGTCGGTAACAAATGTGATTTAGAAAACCTTCGTGAAGTTACTGAA
GGTGAAGGAAGTGAATTGGCTAAATCTTTCTCTGTTCCATTCTTGGAGAC
CTCTGCCAAGAAAAGATTGAATGTGGATGAATGTTTCTTTGAAGTGGTTA
GAGAAATCAAAAAATCACTCAAAGAGCCAGGCAGATCAAAGAAAGATAAA
AAAGGTGGTATCCTTAAAAAGTTTAAAGGTGGTGATTGTTTAATCCTTTA
GGTAAAAAAAAAAAAAAAAAAAAACAAAAAAAAATTCAATAATTTAATTA
TTATAACCAAAAACAACACAAAAACAAAACAAAAAAAAAAAAAATCAATA
ATAGAAGCAATAATAATTAATAGTTCGATAGTGTATCGTTCCTATNTTGT
ACAGCCATTACAAAAAAAAAAAAAAAAAAAAAAAAAAGTGTGATATCACC
TCGTAAAAATAAAATATGTATTTTTATTAAACAATAACAAAAAAAAAAAA
AAAAAAAAAAAAAACAAAAATAAATTATTTATTTGCTACAAAAAAATAAA
ATAAAAACATTATATTTATTGCTCTAAAAAAAAA

Gap gap included
Contig length 1324
Chromosome number (1..6, M) -
Chromosome length -
Start point -
End point -
Strand (PLUS/MINUS) -
Number of clones 18
Number of EST 19
Link to clone list U12227
List of clone(s)

est1=SSF138F,1,244
est2=SSK178F,245,758
est3=SSL710E,282,998
est4=SSG567Z,310,997
est5=VFL236E,313,963
est6=AHF758Z,319,969
est7=SLB741Z,332,996
est8=SSK477Z,354,996
est9=SSB247F,363,740
est10=SSF344Z,369,997
est11=SSG511Z,383,1000
est12=SSA419Z,392,997
est13=SSF191Z,409,1069
est14=SSJ586Z,474,1000
est15=SSL715E,549,1024
est16=SSF138Z,551,991
est17=VSC231Z,552,1073
est18=VSG750F,594,1005
est19=VSE675Z,786,1327
Translated Amino Acid sequence
kkkqknhiniitvynqnyc**lnhit*tllqllyie***FKLVSYINFLIFFIKKKKKKK
KKKIIQKKKKKKKKKRKHCLF---

---VQIKKKNNKIKK*ink*nnsnskks*skknnqtrtakkiktlyisfllieshvsfk*
i*iscygwwwcw*ectyypiypksly*girsnnrgqls*tmssr*rylfiryfrycrsr*
lqcyerpiyayrsrflmcl*cniqnff*rn*cc*rtnh*skr***ssncisr*qm*frkp
s*sy*r*rk*ig*iflcsilgdlcqekiecg*mfl*sg*rnqkitqrarqiker*krwyp
*kv*rw*lfnplgkkkkkkkqkkiq*fnyynqkqhknktkkkkinnrsnnn**fdsvsfl
xctaitkkkkkkkksvisprknkicifikq*qkkkkkkkkqk*iiyllqknkiktlylll
*kk


Translated Amino Acid sequence (All Frames)
Frame A:
kkkqknhiniitvynqnyc**lnhit*tllqllyie***FKLVSYINFLIFFIKKKKKKK
KKKIIQKKKKKKKKKRKHCLF---

---VQIKKKNNKIKK*ink*nnsnskks*skknnqtrtakkiktlyisfllieshvsfk*
i*iscygwwwcw*ectyypiypksly*girsnnrgqls*tmssr*rylfiryfrycrsr*
lqcyerpiyayrsrflmcl*cniqnff*rn*cc*rtnh*skr***ssncisr*qm*frkp
s*sy*r*rk*ig*iflcsilgdlcqekiecg*mfl*sg*rnqkitqrarqiker*krwyp
*kv*rw*lfnplgkkkkkkkqkkiq*fnyynqkqhknktkkkkinnrsnnn**fdsvsfl
xctaitkkkkkkkksvisprknkicifikq*qkkkkkkkkqk*iiyllqknkiktlylll
*kk

Frame B:
kknkktilissqyiikitvnn*itlpkhyynyyisnnnslnlyhi*if*ffllkkkkkkk
kkklfkkkkkkkkkkenivy---

---yk*kkkiik*knk*inktipivkshnqkkiikhaqqkksklytypfyl*kamsvsne
yklvvmggggvgksaltiqfiqnhfieeydptiedsyrrqcqvdedtclldildtagqdd
ysamrdqymrtgqgflcvydvtsrtsfeeinvvreqiirvkdndkvpivlvgnkcdlenl
revtegegselaksfsvpfletsakkrlnvdecffevvreikkslkepgrskkdkkggil
kkfkggdclil*vkkkkkknkkkfnnliiitknntktkqkkkksiieaiiinssivyrsy
xvqplqkkkkkkkkv*yhlvkikyvfllnnnkkkkkkkknknklficykkik*khyiycs
kkk

Frame C:
kktkkpy*yhhsi*skllliikshylnttttiiyriiiv*tciiykffnffy*kkkkkkk
kknyskkkkkkkkkkktlfi---

---tnkkkk**nkkink*ikqfq**kviikkk*snthskknqnfihilftyrkpcqfqmn
in*llwvvvvlvrvhllsnlskitllrntiqq*rtvivdnvksmkilvy*if*ilqvkmi
tvl*etnicvqvkvsyvfmm*hpelllkklmllenksle*kimikfqly*svtnvi*ktf
vkllkvkevnwlnlslfhswrplprkd*mwmnvslkwleksknhsksqadqrkikkvvsl
kslkvviv*sfr*kkkkkktkknsii*ll*pkttqkqnkkkknq**kq**livr*civpx
lyshykkkkkkkkkcdits*k*nmyfy*titkkkkkkkktkinylfatkk*nkniifial
kk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U12227-1 (Contig-U12227-1Q)
/CSM_Contig/Contig-U12227-1Q.Seq.d
(1334 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U12227-1 (Contig-U12227-1Q) /CSM_Contig/Conti... 1281 0.0
Contig-U11492-1 (Contig-U11492-1Q) /CSM_Contig/Conti... 200 3e-51
Contig-U14669-1 (Contig-U14669-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U04811-1 (Contig-U04811-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U02289-1 (Contig-U02289-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U12013-1 (Contig-U12013-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U09777-1 (Contig-U09777-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U06498-1 (Contig-U06498-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U14755-1 (Contig-U14755-1Q) /CSM_Contig/Conti... 38 0.024
Contig-U13643-1 (Contig-U13643-1Q) /CSM_Contig/Conti... 38 0.024

>Contig-U12227-1 (Contig-U12227-1Q) /CSM_Contig/Contig-U12227-1Q.Seq.d
Length = 1334

Score = 1281 bits (646), Expect = 0.0
Identities = 680/697 (97%)
Strand = Plus / Plus


Query: 307 caattccaatagtaaaaagtcataatcnnnnnnnnntaatcaaacacgcacagcnnnnnn 366
||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 307 caattccaatagtaaaaagtcataatcaaaaaaaaataatcaaacacgcacagcaaaaaa 366


Query: 367 nntcaaaactttatacatatcctttttacttatagaaagccatgtcagtttcaaatgaat 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aatcaaaactttatacatatcctttttacttatagaaagccatgtcagtttcaaatgaat 426


Query: 427 ataaattagttgttatgggtggtggtggtgttggtaagagtgcacttactatccaattta 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ataaattagttgttatgggtggtggtggtgttggtaagagtgcacttactatccaattta 486


Query: 487 tccaaaatcactttattgaggaatacgatccaacaatagaggacagttatcgtagacaat 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tccaaaatcactttattgaggaatacgatccaacaatagaggacagttatcgtagacaat 546


Query: 547 gtcaagtcgatgaagatacttgtttattagatattttagatactgcaggtcaagatgatt 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gtcaagtcgatgaagatacttgtttattagatattttagatactgcaggtcaagatgatt 606


Query: 607 acagtgctatgagagaccaatatatgcgtacaggtcaaggtttcttatgtgtttatgatg 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 acagtgctatgagagaccaatatatgcgtacaggtcaaggtttcttatgtgtttatgatg 666


Query: 667 taacatccagaacttcttttgaagaaattaatgttgttagagaacaaatcattagagtaa 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 taacatccagaacttcttttgaagaaattaatgttgttagagaacaaatcattagagtaa 726


Query: 727 aagataatgataaagttccaattgtattagtcggtaacaaatgtgatttagaaaaccttc 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 aagataatgataaagttccaattgtattagtcggtaacaaatgtgatttagaaaaccttc 786


Query: 787 gtgaagttactgaaggtgaaggaagtgaattggctaaatctttctctgttccattcttgg 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 gtgaagttactgaaggtgaaggaagtgaattggctaaatctttctctgttccattcttgg 846


Query: 847 agacctctgccaagaaaagattgaatgtggatgaatgtttctttgaagtggttagagaaa 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 agacctctgccaagaaaagattgaatgtggatgaatgtttctttgaagtggttagagaaa 906


Query: 907 tcaaaaaatcactcaaagagccaggcagatcaaagaaagataaaaaaggtggtatcctta 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 tcaaaaaatcactcaaagagccaggcagatcaaagaaagataaaaaaggtggtatcctta 966


Query: 967 aaaagtttaaaggtggtgattgtttaatcctttaggt 1003
|||||||||||||||||||||||||||||||||||||
Sbjct: 967 aaaagtttaaaggtggtgattgtttaatcctttaggt 1003


Score = 281 bits (142), Expect = 1e-75
Identities = 142/142 (100%)
Strand = Plus / Plus


Query: 18 ccatattaatatcatcacagtatataatcaaaattactgttaataattaaatcacattac 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 ccatattaatatcatcacagtatataatcaaaattactgttaataattaaatcacattac 77


Query: 78 ctaaacactactacaactattatatatcgaataataatagtttaaacttgtatcatatat 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 ctaaacactactacaactattatatatcgaataataatagtttaaacttgtatcatatat 137


Query: 138 aaattttttaattttttttatt 159
||||||||||||||||||||||
Sbjct: 138 aaattttttaattttttttatt 159


Score = 127 bits (64), Expect = 3e-29
Identities = 67/67 (100%)
Strand = Plus / Plus


Query: 1095 tcaataatagaagcaataataattaatagttcgatagtgtatcgttcctatnttgtacag 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 tcaataatagaagcaataataattaatagttcgatagtgtatcgttcctatnttgtacag 1154


Query: 1155 ccattac 1161
|||||||
Sbjct: 1155 ccattac 1161


Score = 101 bits (51), Expect = 2e-21
Identities = 51/51 (100%)
Strand = Plus / Plus


Query: 1188 gtgtgatatcacctcgtaaaaataaaatatgtatttttattaaacaataac 1238
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1188 gtgtgatatcacctcgtaaaaataaaatatgtatttttattaaacaataac 1238


Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus


Query: 1035 ttcaataatttaattattataacc 1058
||||||||||||||||||||||||
Sbjct: 1035 ttcaataatttaattattataacc 1058


Score = 34.2 bits (17), Expect = 0.37
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 227 gaaaacattgtttattt 243
|||||||||||||||||
Sbjct: 227 gaaaacattgtttattt 243


>Contig-U11492-1 (Contig-U11492-1Q) /CSM_Contig/Contig-U11492-1Q.Seq.d
Length = 997

Score = 200 bits (101), Expect = 3e-51
Identities = 208/241 (86%), Gaps = 2/241 (0%)
Strand = Plus / Plus


Query: 423 gaatataaattagttgttatgggtggtggtggtgttggtaagagtgcacttactatccaa 482
||||||||||||||| || | |||||||||||||||||||| |||||| | || || |||
Sbjct: 387 gaatataaattagttattgtaggtggtggtggtgttggtaaaagtgcattaacaattcaa 446


Query: 483 tttatccaaaatcactttattgaggaatacgatccaacaatagaggacagttatcgtaga 542
|| || |||||||| |||||||| ||||| ||||||||||| || || |||||||||| |
Sbjct: 447 ttaattcaaaatcattttattgatgaatatgatccaacaattgaagatagttatcgtaaa 506


Query: 543 caa-tgtcaagtcgatgaagatacttgtttattagatattttagatactgcaggtcaaga 601
||| | |||| | ||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 507 caagtttcaatt-gatgatgaaacttgtttattagatattttagatactgcaggtcaaga 565


Query: 602 tgattacagtgctatgagagaccaatatatgcgtacaggtcaaggtttcttatgtgttta 661
|| || ||||| |||||||| ||||||||| | || |||||||| || |||||||||||
Sbjct: 566 ggaatatagtgcaatgagagatcaatatatgagaactggtcaaggatttttatgtgttta 625


Query: 662 t 662
|
Sbjct: 626 t 626


Score = 36.2 bits (18), Expect = 0.095
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 139 aattttttaatttttttt 156
||||||||||||||||||
Sbjct: 108 aattttttaatttttttt 125


Score = 34.2 bits (17), Expect = 0.37
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 143 ttttaattttttttatt 159
|||||||||||||||||
Sbjct: 60 ttttaattttttttatt 76


>Contig-U14669-1 (Contig-U14669-1Q) /CSM_Contig/Contig-U14669-1Q.Seq.d
Length = 129

Score = 42.1 bits (21), Expect = 0.002
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 132 atatataaattttttaatttt 152
|||||||||||||||||||||
Sbjct: 26 atatataaattttttaatttt 46


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 26,011
Number of Sequences: 6905
Number of extensions: 26011
Number of successful extensions: 3862
Number of sequences better than 10.0: 798
length of query: 1334
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1318
effective length of database: 5,564,391
effective search space: 7333867338
effective search space used: 7333867338
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.29
Homology vs DNA
Query= Contig-U12227-1 (Contig-U12227-1Q) /CSM_Contig/Contig-U12227-1Q.Seq.d
(1334 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(M96622) Dictyostelium discoideum rasB mRNA, complete cds. 1247 0.0 1
(AU034100) Dictyostelium discoideum slug cDNA, clone SLB741. 1247 0.0 1
(C91325) Dictyostelium discoideum slug cDNA, clone SSK477. 1239 0.0 1
(C89876) Dictyostelium discoideum slug cDNA, clone SSG567. 1239 0.0 1
(C92786) Dictyostelium discoideum slug cDNA, clone SSF344. 1235 0.0 1
(C93778) Dictyostelium discoideum slug cDNA, clone SSL710. 1233 0.0 1
(C90080) Dictyostelium discoideum slug cDNA, clone SSG511. 1201 0.0 1
(C89637) Dictyostelium discoideum slug cDNA, clone SSA419. 1195 0.0 1
(C92749) Dictyostelium discoideum slug cDNA, clone SSF191. 1162 0.0 1
(BJ351241) Dictyostelium discoideum cDNA clone:dda42d15, 3' ... 1124 0.0 2
(BJ433915) Dictyostelium discoideum cDNA clone:ddv23g10, 3' ... 1110 0.0 2
(C91112) Dictyostelium discoideum slug cDNA, clone SSJ586. 1025 0.0 1
(BJ415671) Dictyostelium discoideum cDNA clone:ddv23g10, 5' ... 1015 0.0 1
(AU262415) Dictyostelium discoideum vegetative cDNA clone:VS... 848 0.0 1
(AU266781) Dictyostelium discoideum vegetative cDNA clone:VS... 791 0.0 1
(AU263288) Dictyostelium discoideum vegetative cDNA clone:VS... 367 e-150 3
(AU071331) Dictyostelium discoideum slug cDNA, clone SSB247. 470 e-128 1
(AU072809) Dictyostelium discoideum slug cDNA, clone SSF138. 244 7e-60 1
(AU074266) Dictyostelium discoideum slug cDNA, clone SSK178. 236 2e-57 1
(AU034961) Dictyostelium discoideum slug cDNA, clone SLE410. 119 4e-49 2
(AU038932) Dictyostelium discoideum slug cDNA, clone SSM157. 119 4e-49 2
(AU038535) Dictyostelium discoideum slug cDNA, clone SSH840. 119 4e-49 2
(AU039189) Dictyostelium discoideum slug cDNA, clone SSM496. 119 4e-49 2
(BJ368599) Dictyostelium discoideum cDNA clone:ddc47h10, 5' ... 119 4e-49 2
(C90164) Dictyostelium discoideum slug cDNA, clone SSI165. 119 1e-46 2
(EG018021) EST00530_0906 Sporophyte cDNA Library Porphyra ha... 86 3e-46 4
(M62610) D.disocoideum ras mRNA, complete cds. 119 2e-41 3
(AU051942) Dictyostelium discoideum slug cDNA, clone SSC440. 119 2e-41 2
(AU061483) Dictyostelium discoideum slug cDNA, clone SLE410. 109 8e-41 2
(Z11804) D.discoideum ras gene. 119 5e-38 4
(AU039106) Dictyostelium discoideum slug cDNA, clone SSM392. 111 8e-36 5
(J04160) D.discoideum ras protein (DdrasG) gene, complete cds. 111 2e-35 4
(C90726) Dictyostelium discoideum slug cDNA, clone SSJ875. 111 3e-35 4
(AU261926) Dictyostelium discoideum vegetative cDNA clone:VS... 111 3e-35 4
(AU284244) Dictyostelium discoideum gamete cDNA clone:FC-AC1... 111 3e-35 4
(C94532) Dictyostelium discoideum slug cDNA, clone SSL172. 111 3e-35 4
(C92010) Dictyostelium discoideum slug cDNA, clone SSC774. 111 4e-35 4
(AU284523) Dictyostelium discoideum gamete cDNA clone:FC-BB0... 111 1e-34 4
(AU265590) Dictyostelium discoideum vegetative cDNA clone:VS... 111 3e-34 2
(AU270097) Dictyostelium discoideum vegetative cDNA clone:VS... 111 3e-34 2
(BJ377594) Dictyostelium discoideum cDNA clone:ddc24p01, 3' ... 111 3e-34 2
(BJ433769) Dictyostelium discoideum cDNA clone:ddv22k19, 3' ... 111 3e-34 2
(AU264323) Dictyostelium discoideum vegetative cDNA clone:VS... 111 3e-34 2
(AU271537) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 111 3e-34 2
(AU271536) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 111 3e-34 2
(C92136) Dictyostelium discoideum slug cDNA, clone SSD134. 113 4e-30 2
(Z11533) D.discoideum rasG gene. 111 6e-30 5
(X89037) D.minutum DNA for ras2 gene. 84 2e-28 5
(AU267407) Dictyostelium discoideum vegetative cDNA clone:VS... 111 1e-26 2
(EY489535) CBBP17095.fwd CBBP Hirudo medicinalis hermaphrodi... 80 1e-25 3
(EY491366) CBBP18219.fwd CBBP Hirudo medicinalis hermaphrodi... 80 1e-25 3
(AU053543) Dictyostelium discoideum slug cDNA, clone SLI875. 111 6e-22 3
(EG016694) EST01419_0906 Sporophyte cDNA Library Porphyra ha... 64 2e-20 3
(AU262125) Dictyostelium discoideum vegetative cDNA clone:VS... 100 2e-18 3
(FC743836) CBBI13941.fwd CBBI Lottia gigantea 26h,37h,61h La... 98 1e-17 2
(FC743835) CBBI13941.rev CBBI Lottia gigantea 26h,37h,61h La... 98 1e-17 2
(FC782669) CBGC13856.fwd CBGC Lottia gigantea 15h 18h embryo... 98 1e-17 2
(FC782668) CBGC13856.rev CBGC Lottia gigantea 15h 18h embryo... 98 1e-17 2
(AU272407) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 103 2e-17 1
(AU272406) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 103 2e-17 1
(FC807879) CBGC9285.rev CBGC Lottia gigantea 15h 18h embryos... 88 1e-16 2
(FC605651) CAXS2246.fwd CAXS Lottia gigantea from head, foot... 88 1e-16 2
(FC605650) CAXS2246.rev CAXS Lottia gigantea from head, foot... 88 1e-16 2
(FC794285) CBGC22808.rev CBGC Lottia gigantea 15h 18h embryo... 88 1e-16 2
(FC807880) CBGC9285.fwd CBGC Lottia gigantea 15h 18h embryos... 88 1e-16 2
(FC739072) CBBI10950.fwd CBBI Lottia gigantea 26h,37h,61h La... 88 1e-16 2
(FC739071) CBBI10950.rev CBBI Lottia gigantea 26h,37h,61h La... 88 1e-16 2
(EH644477) AU_Cv_EST_004D_G12 Oyster mixed tissue normalized... 78 2e-15 3
(EH649281) AU_Cv_EST_001C_C08 Oyster mixed tissue normalized... 78 3e-15 3
(DV084850) 327-384-14_C20_KS Nematostella vectensis normaliz... 72 3e-15 3
(FC304358) CAIC14087.fwd CAIC Nematostella vectensis Nemve w... 72 3e-15 3
(FC214116) CAGF2512.fwd CAGF Nematostella vectensis Nemve Ea... 72 4e-15 3
(FC256347) CAGN10413.fwd CAGN Nematostella vectensis Nemve m... 72 5e-15 3
(FC280001) CAGN24028.fwd CAGN Nematostella vectensis Nemve m... 72 5e-15 3
(EC761172) PSE00002544 rw_mgpallid Polysphondylium pallidum ... 48 1e-14 3
(AM520159) Paracentrotus lividus EST, clone MPMGp1171G0757Q,... 84 2e-13 2
(AM216708) Paracentrotus lividus EST, clone MPMGp1174J2435Q,... 84 2e-13 2
(AM598773) Paracentrotus lividus EST, clone MPMGp1174L1467Q,... 84 2e-13 2
(EC818963) SME00002933 esmbsro2 Sawyeria marylandensis cDNA,... 80 4e-13 2
(U53177) Schistosoma mansoni ras protein homolog Psmras1 (Sm... 58 8e-13 3
(DV183551) CT024_C03_CT024_3700_91.ab1 C. tentans tissue cul... 56 9e-13 4
(AM191555) Paracentrotus lividus EST, clone MPMGp1172A1728Q,... 84 2e-12 2
(DB826379) Nilaparvata lugens mRNA, EST clone:NLHT5348, 5' e... 70 2e-12 4
(DV185679) CT052_B11_CT052_3700_91.ab1 C. tentans tissue cul... 56 2e-12 4
(FG710842) G1144P312FC1.T0 Anolis carolinensis pooled normal... 70 3e-12 2
(FG760393) G1146P345FM18.T0 Anolis carolinensis pooled norma... 70 3e-12 2
(FG751370) G1146P337FM20.T0 Anolis carolinensis pooled norma... 70 3e-12 2
(Z18926) D.discoideum rasC gene. 62 6e-12 3
(Z14134) D.discoideum rasS gene encoding ras-related protein. 70 6e-12 3
(AU038150) Dictyostelium discoideum slug cDNA, clone SSH333. 62 7e-12 3
(DB655237) Saccharomyces cerevisiae mRNA, clone: Y025_O08_F.... 44 7e-12 5
(C94517) Dictyostelium discoideum slug cDNA, clone SSL152. 62 8e-12 3
(DB666366) Saccharomyces cerevisiae mRNA, clone: Y104_M02_F.... 44 8e-12 5
(DB666740) Saccharomyces cerevisiae mRNA, clone: Y106_N17_F.... 44 9e-12 5
(DB661373) Saccharomyces cerevisiae mRNA, clone: Y069_J17_F.... 44 1e-11 5
(DB656325) Saccharomyces cerevisiae mRNA, clone: Y034_H03_F.... 44 1e-11 5
(DB666516) Saccharomyces cerevisiae mRNA, clone: Y105_I21_F.... 44 1e-11 5
(AM514960) Paracentrotus lividus EST, clone MPMGp1171B0520Q,... 84 2e-11 1
(AM206104) Paracentrotus lividus EST, clone MPMGp1172J018Q, ... 84 2e-11 1
(AM203632) Paracentrotus lividus EST, clone MPMGp1172N0957Q,... 84 2e-11 1

>(M96622) Dictyostelium discoideum rasB mRNA, complete cds.
Length = 672

Score = 1247 bits (629), Expect = 0.0
Identities = 629/629 (100%)
Strand = Plus / Plus


Query: 375 ctttatacatatcctttttacttatagaaagccatgtcagtttcaaatgaatataaatta 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ctttatacatatcctttttacttatagaaagccatgtcagtttcaaatgaatataaatta 71


Query: 435 gttgttatgggtggtggtggtgttggtaagagtgcacttactatccaatttatccaaaat 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 gttgttatgggtggtggtggtgttggtaagagtgcacttactatccaatttatccaaaat 131


Query: 495 cactttattgaggaatacgatccaacaatagaggacagttatcgtagacaatgtcaagtc 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 cactttattgaggaatacgatccaacaatagaggacagttatcgtagacaatgtcaagtc 191


Query: 555 gatgaagatacttgtttattagatattttagatactgcaggtcaagatgattacagtgct 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gatgaagatacttgtttattagatattttagatactgcaggtcaagatgattacagtgct 251


Query: 615 atgagagaccaatatatgcgtacaggtcaaggtttcttatgtgtttatgatgtaacatcc 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 atgagagaccaatatatgcgtacaggtcaaggtttcttatgtgtttatgatgtaacatcc 311


Query: 675 agaacttcttttgaagaaattaatgttgttagagaacaaatcattagagtaaaagataat 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 agaacttcttttgaagaaattaatgttgttagagaacaaatcattagagtaaaagataat 371


Query: 735 gataaagttccaattgtattagtcggtaacaaatgtgatttagaaaaccttcgtgaagtt 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gataaagttccaattgtattagtcggtaacaaatgtgatttagaaaaccttcgtgaagtt 431


Query: 795 actgaaggtgaaggaagtgaattggctaaatctttctctgttccattcttggagacctct 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 actgaaggtgaaggaagtgaattggctaaatctttctctgttccattcttggagacctct 491


Query: 855 gccaagaaaagattgaatgtggatgaatgtttctttgaagtggttagagaaatcaaaaaa 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gccaagaaaagattgaatgtggatgaatgtttctttgaagtggttagagaaatcaaaaaa 551


Query: 915 tcactcaaagagccaggcagatcaaagaaagataaaaaaggtggtatccttaaaaagttt 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tcactcaaagagccaggcagatcaaagaaagataaaaaaggtggtatccttaaaaagttt 611


Query: 975 aaaggtggtgattgtttaatcctttaggt 1003
|||||||||||||||||||||||||||||
Sbjct: 612 aaaggtggtgattgtttaatcctttaggt 640

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,084,569,030
Number of extensions: 71285466
Number of successful extensions: 6962224
Number of sequences better than 10.0: 1000
Length of query: 1334
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1310
Effective length of database: 97,308,875,965
Effective search space: 127474627514150
Effective search space used: 127474627514150
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 2
Homology vs Protein
Query= Contig-U12227-1 (Contig-U12227-1Q) /CSM_Contig/Contig-U12227-1Q.Seq.d
(1334 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(P32252) RecName: Full=Ras-like protein rasB; Flags: Precursor; ... 338 3e-91
(P03967) RecName: Full=Ras-like protein rasD; AltName: Full=Tran... 238 4e-61
JC6328(JC6328)Ras2 protein - slime mold (Dictyostelium discoideum) 236 2e-60
S58220(S58220) transforming protein ras-2 - Dictyostelium minutu... 234 5e-60
C36365(C36365)transforming protein homolog MRAS3 - Rhizomucor ra... 230 1e-58
TVDORS(A01371)transforming protein ras - slime mold (Dictyosteli... 228 4e-58
(P22280) RecName: Full=Ras-like protein 3; Flags: Precursor; &M... 227 8e-58
(O42785) RecName: Full=Ras-like protein; AltName: Full=Ct-Ras; F... 224 7e-57
M62610_1(M62610|pid:none) D.disocoideum ras mRNA, complete cds. 222 3e-56
AB175073_1(AB175073|pid:none) Trametes hirsuta ras gene for RAS ... 219 1e-55
(P87018) RecName: Full=Ras-like protein; Flags: Precursor; &U79... 219 1e-55
AF329890_1(AF329890|pid:none) Pisolithus sp. 441 ras-like protei... 219 2e-55
AM269955_41(AM269955|pid:none) Aspergillus niger contig An01c008... 218 5e-55
AF250024_1(AF250024|pid:none) Suillus bovinus Ras1p (ras1) mRNA,... 217 7e-55
AY232652_1(AY232652|pid:none) Penicillium marneffei RAS GTPase (... 216 1e-54
(P28775) RecName: Full=Ras-like protein; Flags: Precursor; &D00... 216 2e-54
(Q12526) RecName: Full=Ras-like protein; Flags: Precursor; 215 3e-54
(O93856) RecName: Full=Ras-like protein; Flags: Precursor; &AF0... 212 2e-53
Y17188_1(Y17188|pid:none) Platichthys flesus Ki-ras gene (exons ... 211 4e-53
(Q5F352) RecName: Full=GTPase NRas; AltName: Full=Transforming p... 211 5e-53
AB220379_1(AB220379|pid:none) Macaca fascicularis mRNA, clone Qb... 211 6e-53
CR382138_408(CR382138|pid:none) Debaryomyces hansenii strain CBS... 211 6e-53
(Q04970) RecName: Full=GTPase NRas; AltName: Full=Transforming p... 211 6e-53
AK150357_1(AK150357|pid:none) Mus musculus bone marrow macrophag... 211 6e-53
EF043589_1(EF043589|pid:none) Synthetic construct clone ATCC 106... 211 6e-53
CT010359_1(CT010359|pid:none) Mus musculus full open reading fra... 211 6e-53
(P01111) RecName: Full=GTPase NRas; AltName: Full=Transforming p... 211 6e-53
AK011704_1(AK011704|pid:none) Mus musculus 10 days embryo whole ... 211 6e-53
BC048875_1(BC048875|pid:none) Danio rerio zgc:55558, mRNA (cDNA ... 211 6e-53
(Q95ME4) RecName: Full=GTPase NRas; AltName: Full=Transforming p... 211 6e-53
AY892487_1(AY892487|pid:none) Synthetic construct Homo sapiens c... 211 6e-53
Z23152_1(Z23152|pid:none) Kirsten murine sarcoma virus proto-onc... 211 6e-53
(P08556) RecName: Full=GTPase NRas; AltName: Full=Transforming p... 211 6e-53
AK164065_1(AK164065|pid:none) Mus musculus 7 days embryo whole b... 211 6e-53
DQ198150_1(DQ198150|pid:none) Nassarius reticulatus Ras (ras) mR... 210 8e-53
AF134251_1(AF134251|pid:none) Candida albicans Ras homolog type ... 210 8e-53
(O42277) RecName: Full=GTPase KRas; AltName: Full=Ki-Ras; ... 210 8e-53
(Q9YH38) RecName: Full=GTPase KRas; AltName: Full=Ki-Ras; ... 210 1e-52
EU162748_1(EU162748|pid:none) Kryptolebias marmoratus N-ras (N-r... 210 1e-52
BT081877_1(BT081877|pid:none) Rana catesbeiana clone rcat-evr-53... 210 1e-52
Y17187_1(Y17187|pid:none) Platichthys flesus Ki-ras gene (exons ... 209 1e-52
M54968_1(M54968|pid:none) Homo sapiens K-ras oncogene protein (K... 209 1e-52
(P79800) RecName: Full=GTPase KRas; AltName: Full=K-Ras 2; AltNa... 209 1e-52
AF493917_1(AF493917|pid:none) Homo sapiens Ras family small GTP ... 209 1e-52
FJ529376_1(FJ529376|pid:none) Dicentrarchus labrax Ki-ras-1 mRNA... 209 1e-52
S31720(S31720)transforming protein (K-ras) - short-tailed opossu... 209 1e-52
AK165960_1(AK165960|pid:none) Mus musculus lung RCB-0558 LLC cDN... 209 2e-52
U45967_1(U45967|pid:none) Oncorhynchus mykiss G-protein (P-ras) ... 209 2e-52
(Q91806) RecName: Full=GTPase NRas; AltName: Full=Transforming p... 209 2e-52
U45968_1(U45968|pid:none) Oncorhynchus mykiss G-protein (P-ras) ... 209 2e-52
DQ195224_1(DQ195224|pid:none) Anguilla anguilla Ras (ras) mRNA, ... 208 3e-52
(Q5RD87) RecName: Full=GTPase NRas; AltName: Full=Transforming p... 208 3e-52
A54321(A54321)transforming protein c-Ki-ras-1, hepatic - rainbow... 208 3e-52
AK155064_1(AK155064|pid:none) Mus musculus NOD-derived CD11c +ve... 208 3e-52
(P08647) RecName: Full=Ras-like protein 1; Flags: Precursor; &C... 208 3e-52
U53177_1(U53177|pid:none) Schistosoma mansoni ras protein homolo... 208 3e-52
X03771_1(X03771|pid:none) Yeast (Schizosaccharomyces pombe) RAS ... 208 3e-52
BT074906_1(BT074906|pid:none) Osmerus mordax clone omor-eva-510-... 208 3e-52
(B4JFU8) RecName: Full=Ras-like protein 1; Flags: Precursor; 208 4e-52
(B4NJ72) RecName: Full=Ras-like protein 1; Flags: Precursor; 208 4e-52
(B4LY29) RecName: Full=Ras-like protein 1; Flags: Precursor; 208 4e-52
S34138(S34138)transforming protein (K-ras) - Kirsten murine sarc... 208 4e-52
BC096978_1(BC096978|pid:none) Danio rerio similar to Transformin... 208 4e-52
AY889087_1(AY889087|pid:none) Synthetic construct Homo sapiens c... 207 5e-52
BC095393_1(BC095393|pid:none) Danio rerio -Ha-ras Harvey rat sar... 207 5e-52
AY891660_1(AY891660|pid:none) Synthetic construct Homo sapiens c... 207 5e-52
DQ078265_1(DQ078265|pid:none) Kryptolebias marmoratus p21 protei... 207 5e-52
A43816(A43816;S78409;S25430)transforming protein ras - rabbit 207 7e-52
PDBN(1RVD)A MOL_ID: 1;MOL_ID: 1; MOLECULE: TRANSFORMING PROTEIN ... 207 9e-52
NRL(1Q21) transforming protein p21 (H-ras-1) (catalytic domain w... 207 9e-52
AB046925_1(AB046925|pid:none) Synthetic construct gene for Rai-c... 207 9e-52
AY893772_1(AY893772|pid:none) Synthetic construct Homo sapiens c... 207 9e-52
NRL(1AGP) H-ras p21 protein mutant with gly 12 replaced by asp (... 207 9e-52
(P01112) RecName: Full=GTPase HRas; AltName: Full=Transforming p... 207 9e-52
BC099130_1(BC099130|pid:none) Rattus norvegicus Harvey rat sarco... 207 9e-52
NRL(421P) H-ras p21 protein mutant with gly 12 replaced by arg (... 207 9e-52
BC086608_1(BC086608|pid:none) Rattus norvegicus Harvey rat sarco... 207 9e-52
(P23175) RecName: Full=GTPase HRas; AltName: Full=Transforming p... 207 9e-52
AY891193_1(AY891193|pid:none) Synthetic construct Homo sapiens c... 207 9e-52
(P20171) RecName: Full=GTPase HRas; AltName: Full=Transforming p... 207 9e-52
NRL(121P) H-ras p21 protein complex with guanosine-5'-[b,g-methy... 207 9e-52
NRL(821P) C-h-ras p21 protein (residues 1 166) mutant with gly 1... 207 9e-52
AK342684_1(AK342684|pid:none) Acyrthosiphon pisum ACYPI000776 mR... 207 9e-52
(Q07983) RecName: Full=GTPase KRas; AltName: Full=K-Ras 2; AltNa... 207 9e-52
NRL(2Q21) transforming protein p21 (H-ras-1) mutant (G12V) (cata... 207 9e-52
AB046924_1(AB046924|pid:none) Synthetic construct gene for Rai-c... 207 9e-52
DQ215240_1(DQ215240|pid:none) Taeniopygia guttata clone 0063P001... 206 1e-51
(P08642) RecName: Full=GTPase HRas; AltName: Full=Transforming p... 206 1e-51
AY037008_1(AY037008|pid:none) Xenopus laevis small G-protein H-R... 206 1e-51
BT059331_1(BT059331|pid:none) Salmo salar clone ssal-rgf-541-359... 206 1e-51
(P01116) RecName: Full=GTPase KRas; AltName: Full=K-Ras 2; AltNa... 206 1e-51
FJ529378_1(FJ529378|pid:none) Liza aurata Ki-ras-2 mRNA, complet... 206 2e-51
(Q05147) RecName: Full=GTPase KRas; AltName: Full=Ki-Ras; ... 206 2e-51
J02207_2(J02207|pid:none) harvey murine sarcoma virus p21 v-has ... 206 2e-51
(P01115) RecName: Full=Transforming protein p29; Contains: Rec... 206 2e-51
NRL(221P) H-ras p21 protein mutant with asp 38 replaced by glu (... 205 3e-51
CR382123_579(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 205 3e-51
NRL(621P) H-ras p21 protein mutant with gln 61 replaced by his (... 205 3e-51
AJ785000_1(AJ785000|pid:none) Echinococcus multilocularis mRNA f... 205 3e-51
FJ176739_1(FJ176739|pid:none) Meloidogyne incognita RAS (Let-60)... 204 4e-51
DQ305041_1(DQ305041|pid:none) Mytilus galloprovincialis ras (ras... 204 4e-51
(P01114) RecName: Full=Transforming protein p29; Contains: Rec... 204 4e-51
CU928168_367(CU928168|pid:none) Kluyveromyces thermotolerans str... 204 6e-51
NRL(721P) H-ras p21 protein mutant with gln 61 replaced by leu (... 204 6e-51
K01960_1(K01960|pid:none) D.melanogaster chromosome 3 locus 85D ... 203 1e-50
BC076419_1(BC076419|pid:none) Danio rerio neuroblastoma RAS vira... 203 1e-50
CT027601_4(CT027601|pid:none) Zebrafish DNA sequence from clone ... 203 1e-50
(P22126) RecName: Full=Protein ras-1; Flags: Precursor; &AB0169... 203 1e-50
M55535_1(M55535|pid:none) C.elegans ras protein (let-60 ras) mRN... 203 1e-50
TVBYSR(A22715)transforming protein ras - fission yeast (Schizos... 202 2e-50
AY886901_1(AY886901|pid:none) Kryptolebias marmoratus p21-ras pr... 202 3e-50
K01970_1(K01970|pid:none) S.cerevisiae RAS1 gene, complete codin... 202 3e-50
EU560397_1(EU560397|pid:none) Echinococcus granulosus dev-stage ... 202 3e-50
FN314227_1(FN314227|pid:none) Schistosoma japonicum isolate Anhu... 200 8e-50
(P79737) RecName: Full=GTPase NRas; AltName: Full=Transforming p... 200 8e-50
AF085280_1(AF085280|pid:none) Xenopus laevis Ras protein (ras) m... 200 1e-49
AY787853_1(AY787853|pid:none) Rana catesbeiana Kirsten murine sa... 199 2e-49
BC092803_1(BC092803|pid:none) Danio rerio related RAS viral (r-r... 198 4e-49
AE016817_139(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 198 4e-49
AF045637_1(AF045637|pid:none) Caenorhabditis elegans cosmid C44C... 197 7e-49
CR380948_191(CR380948|pid:none) Candida glabrata strain CBS138 c... 197 7e-49
(P38976) RecName: Full=Ras-like protein RAS2; Flags: Precursor; ... 196 2e-48
AJ720666_1(AJ720666|pid:none) Gallus gallus mRNA for hypothetica... 195 3e-48
Y18167_1(Y18167|pid:none) Suberites domuncula mRNA for ras prote... 195 4e-48
T32953(T32953)hypothetical protein C44C11.1 - Caenorhabditis ele... 194 5e-48
BC050837_1(BC050837|pid:none) Mus musculus Harvey rat sarcoma vi... 194 5e-48
(P62070) RecName: Full=Ras-related protein R-Ras2; AltName: Full... 193 1e-47
BC123337_1(BC123337|pid:none) Xenopus laevis hypothetical protei... 193 1e-47
AK078870_1(AK078870|pid:none) Mus musculus adult male colon cDNA... 193 1e-47
AY888825_1(AY888825|pid:none) Synthetic construct Homo sapiens c... 193 1e-47
AJ437024_1(AJ437024|pid:none) Homo sapiens mRNA for p19 H-RasIDX... 193 1e-47
AF493924_1(AF493924|pid:none) Homo sapiens Ras family small GTP ... 193 1e-47
FN315383_1(FN315383|pid:none) Schistosoma japonicum isolate Anhu... 192 2e-47
X00528_1(X00528|pid:none) S.cerevisiae rasH related gene c-ras(s... 192 2e-47
AJ431729_1(AJ431729|pid:none) Oscheius tipulae mRNA for small G ... 192 2e-47
(P51539) RecName: Full=Ras-like protein RAS1; Flags: Precursor; ... 192 3e-47
AK011419_1(AK011419|pid:none) Mus musculus 10 days embryo whole ... 191 5e-47
BT079893_1(BT079893|pid:none) Esox lucius clone eluc-evq-521-111... 191 7e-47
AB076899_1(AB076899|pid:none) Ciona intestinalis Ci-rap1b mRNA f... 191 7e-47
BC073313_1(BC073313|pid:none) Xenopus laevis MGC80716 protein, m... 191 7e-47
BC095467_1(BC095467|pid:none) Homo sapiens RAP1B, member of RAS ... 190 1e-46
AY888364_1(AY888364|pid:none) Synthetic construct Homo sapiens c... 189 3e-46
CR859758_1(CR859758|pid:none) Pongo abelii mRNA; cDNA DKFZp469L0... 188 3e-46
(P08645) RecName: Full=Ras-like protein 3; AltName: Full=Protein... 188 4e-46
BC078173_1(BC078173|pid:none) Homo sapiens RAP1B, member of RAS ... 188 4e-46
(Q6TEN1) RecName: Full=Ras-related protein Rap-1b; Flags: Precur... 187 7e-46
(Q55CB7) RecName: Full=Ras-like protein rasY; Flags: Precursor; 187 1e-45
AK299606_1(AK299606|pid:none) Homo sapiens cDNA FLJ61162 complet... 187 1e-45
(Q55CC0) RecName: Full=Ras-like protein rasW; Flags: Precursor; 186 2e-45
BT077285_1(BT077285|pid:none) Caligus rogercresseyi clone crog-e... 185 3e-45
BX649534_4(BX649534|pid:none) Zebrafish DNA sequence from clone ... 185 4e-45
BT082381_1(BT082381|pid:none) Anoplopoma fimbria clone afim-evh-... 185 4e-45
BT076654_1(BT076654|pid:none) Caligus rogercresseyi clone crog-e... 184 5e-45
BT075730_1(BT075730|pid:none) Osmerus mordax clone omor-eva-506-... 184 5e-45
DQ138746_1(DQ138746|pid:none) Drosophila melanogaster strain Ral... 184 6e-45
B36365(B36365)transforming protein homolog MRAS2 - Rhizomucor ra... 184 8e-45
AY605487_1(AY605487|pid:none) Xenopus laevis Rap 1A2 GTPase mRNA... 184 8e-45
BT046913_1(BT046913|pid:none) Salmo salar clone ssal-evd-523-272... 184 8e-45
BT050090_1(BT050090|pid:none) Salmo salar clone ssal-evd-558-184... 183 1e-44
(P62833) RecName: Full=Ras-related protein Rap-1A; AltName: Full... 182 2e-44
AB170011_1(AB170011|pid:none) Bombyx mori ras3 mRNA for ras prot... 182 2e-44
DQ213796_1(DQ213796|pid:none) Taeniopygia guttata clone 0061P000... 181 4e-44
BT078769_1(BT078769|pid:none) Esox lucius clone eluc-evq-539-166... 181 4e-44
EU359271_1(EU359271|pid:none) Mus musculus Rap1A-retro2 mRNA, co... 181 4e-44
FN357380_20(FN357380|pid:none) Schistosoma mansoni genome sequen... 181 5e-44
U07795_1(U07795|pid:none) Rattus norvegicus Rap1B mRNA, complete... 181 5e-44
EU359270_1(EU359270|pid:none) Mus musculus Rap1A-retro1 mRNA, co... 181 5e-44
AY888366_1(AY888366|pid:none) Synthetic construct Homo sapiens c... 180 9e-44
BT056846_1(BT056846|pid:none) Salmo salar clone ssal-rgb2-504-23... 180 9e-44
(Q94694) RecName: Full=Ras-related protein Rap-1; AltName: Full=... 180 9e-44
BT056685_1(BT056685|pid:none) Salmo salar clone ssal-eve-523-364... 180 9e-44
BC158407_1(BC158407|pid:none) Xenopus tropicalis related RAS vir... 180 9e-44
AF000653_1(AF000653|pid:none) Physarum polycephalum Pprap1 prote... 180 9e-44
AK030897_1(AK030897|pid:none) Mus musculus adult male thymus cDN... 180 1e-43
(P18613) RecName: Full=Ras-related protein rapA; AltName: Full=R... 179 2e-43
(P04388) RecName: Full=Ras-like protein 2; Flags: Precursor; &A... 179 2e-43
TVHUR2(A33121;A36039) transforming protein rap2b - human &X5298... 179 3e-43
BT075649_1(BT075649|pid:none) Osmerus mordax clone omor-eva-513-... 178 3e-43
(P61225) RecName: Full=Ras-related protein Rap-2b; Flags: Precur... 178 3e-43
AY892932_1(AY892932|pid:none) Synthetic construct Homo sapiens c... 178 3e-43
(P70426) RecName: Full=GTP-binding protein Rit1; AltName: Full=R... 177 8e-43
AB206960_1(AB206960|pid:none) Bombyx mori Bras2 mRNA for ras onc... 177 8e-43
(Q92963) RecName: Full=GTP-binding protein Rit1; AltName: Full=R... 177 1e-42
EU596600_1(EU596600|pid:none) Ovis aries RIT mRNA, complete cds. 177 1e-42
BC054999_1(BC054999|pid:none) Danio rerio RAP2B, member of RAS o... 176 1e-42
(O08989) RecName: Full=Ras-related protein M-Ras; AltName: Full=... 176 1e-42
BC085752_1(BC085752|pid:none) Rattus norvegicus muscle RAS oncog... 176 2e-42
DQ972971_1(DQ972971|pid:none) Sus scrofa RIT1 mRNA, complete cds. 176 2e-42
BC161519_1(BC161519|pid:none) Xenopus tropicalis RAP2B, member o... 176 2e-42
FJ943988_1(FJ943988|pid:none) Ovis aries RAP2A mRNA, complete cds. 175 3e-42
(P10114) RecName: Full=Ras-related protein Rap-2a; AltName: Full... 175 4e-42
AY891608_1(AY891608|pid:none) Synthetic construct Homo sapiens c... 175 4e-42
BC157162_1(BC157162|pid:none) Xenopus tropicalis RAP2A, member o... 175 4e-42
AY890832_1(AY890832|pid:none) Synthetic construct Homo sapiens c... 175 4e-42
CR859503_1(CR859503|pid:none) Pongo abelii mRNA; cDNA DKFZp459O0... 175 4e-42
(P10301) RecName: Full=Ras-related protein R-Ras; AltName: Full=... 175 4e-42
BT076868_1(BT076868|pid:none) Caligus rogercresseyi clone crog-e... 174 5e-42
BC110229_1(BC110229|pid:none) Bos taurus related RAS viral (r-ra... 174 5e-42
DQ311403_1(DQ311403|pid:none) Bombyx mori ras-related protein 2 ... 174 6e-42
BC100221_1(BC100221|pid:none) Xenopus laevis hypothetical protei... 174 8e-42
AY460177_1(AY460177|pid:none) Gallus gallus R-Ras3 mRNA, complet... 174 8e-42
BC140603_1(BC140603|pid:none) Bos taurus muscle RAS oncogene hom... 173 1e-41
BC027363_1(BC027363|pid:none) Mus musculus RAP2C, member of RAS ... 173 1e-41
AB172308_1(AB172308|pid:none) Macaca fascicularis brain cDNA clo... 172 2e-41
(Q08DI5) RecName: Full=Ras-related protein Rap-2c; Flags: Precur... 172 2e-41
AY190723_1(AY190723|pid:none) Pagrus major RAP2B-like protein mR... 172 2e-41
AY149916_1(AY149916|pid:none) Ustilago maydis small G-protein Ra... 172 2e-41
BT059562_1(BT059562|pid:none) Salmo salar clone ssal-rgf-517-229... 171 4e-41
BC003403_1(BC003403|pid:none) Homo sapiens RAP2C, member of RAS ... 171 5e-41
BT078291_1(BT078291|pid:none) Lepeophtheirus salmonis Pacific fo... 171 5e-41
EU616728_1(EU616728|pid:none) Kryptolebias marmoratus R-ras3 mRN... 171 5e-41
U01053_1(U01053|pid:none) Entamoeba histolytica HM-1:IMSS ras ho... 171 7e-41
AL645755_4(AL645755|pid:none) Zebrafish DNA sequence from clone ... 170 9e-41
EU681274_1(EU681274|pid:none) Penicillium marneffei strain SUMS0... 170 9e-41
BC072861_1(BC072861|pid:none) Xenopus laevis MGC80266 protein, m... 170 1e-40
M10804_1(M10804|pid:none) Drosophila melanogaster ras oncogene, ... 170 1e-40
FM992695_186(FM992695|pid:none) Candida dubliniensis CD36 chromo... 169 2e-40
CR382135_786(CR382135|pid:none) Debaryomyces hansenii chromosome... 169 2e-40
FN392322_708(FN392322|pid:none) Pichia pastoris GS115 chromosome... 169 3e-40
AF545586_1(AF545586|pid:none) Ustilago maydis ras-like protein R... 168 4e-40
U01054_1(U01054|pid:none) Entamoeba histolytica HM-1:IMSS ras ho... 168 5e-40
AE013599_2301(AE013599|pid:none) Drosophila melanogaster chromos... 168 5e-40
BT075755_1(BT075755|pid:none) Osmerus mordax clone omor-eva-506-... 167 8e-40
CU633899_504(CU633899|pid:none) Podospora anserina genomic DNA c... 166 1e-39
AE014298_566(AE014298|pid:none) Drosophila melanogaster chromoso... 166 1e-39
BT076579_1(BT076579|pid:none) Caligus rogercresseyi clone crog-e... 166 1e-39
BT074696_1(BT074696|pid:none) Osmerus mordax clone omor-eva-519-... 166 2e-39
AK298768_1(AK298768|pid:none) Homo sapiens cDNA FLJ52018 complet... 165 3e-39
T21066(T21066) hypothetical protein F17C8.4 - Caenorhabditis ele... 165 3e-39
BC085637_1(BC085637|pid:none) Danio rerio zgc:92116, mRNA (cDNA ... 165 4e-39
(P11233) RecName: Full=Ras-related protein Ral-A; Flags: Precurs... 165 4e-39
BC163607_1(BC163607|pid:none) Danio rerio si:ch211-93a2.3, mRNA ... 164 5e-39
(P63320) RecName: Full=Ras-related protein Ral-A; Flags: Precurs... 164 7e-39
M73694_1(M73694|pid:none) Oncorhynchus mykiss ras-1 mRNA, partia... 164 9e-39
BC102111_1(BC102111|pid:none) Bos taurus ras related v-ral simia... 164 9e-39
AJ719739_1(AJ719739|pid:none) Gallus gallus partial mRNA for hyp... 164 9e-39
BC053216_1(BC053216|pid:none) Danio rerio v-ral simian leukemia ... 163 1e-38
BT025381_1(BT025381|pid:none) Bos taurus v-ral simian leukemia v... 163 1e-38
DQ414548_1(DQ414548|pid:none) Suberites domuncula RalA gene, com... 163 1e-38
(P22124) RecName: Full=Ras-related protein O-RAL; Flags: Precurs... 163 1e-38
AK013881_1(AK013881|pid:none) Mus musculus 12 days embryo head c... 163 1e-38
AF278539_1(AF278539|pid:none) Xenopus laevis Ras related small G... 163 1e-38
(P13856) RecName: Full=Ras-related protein RSR1; Flags: Precurso... 163 1e-38
AE016819_697(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 162 3e-38
E38625(E38625)GTP-binding protein o-ral - electric ray (Discopyg... 161 4e-38
BC018060_1(BC018060|pid:none) Homo sapiens Ras-like without CAAX... 161 6e-38
(Q99578) RecName: Full=GTP-binding protein Rit2; AltName: Full=R... 161 6e-38
AY813844_1(AY813844|pid:none) Schistosoma japonicum SJCHGC06290 ... 161 6e-38
K01962_1(K01962|pid:none) D.melanogaster chromosome 3 locus 64B ... 160 7e-38
AF081118_1(AF081118|pid:none) Mus musculus H-ras gene, partial c... 160 7e-38
CU928180_381(CU928180|pid:none) Kluyveromyces thermotolerans str... 160 7e-38
U01051_1(U01051|pid:none) Entamoeba histolytica HM-1:IMSS rap ho... 160 7e-38
(P70425) RecName: Full=GTP-binding protein Rit2; AltName: Full=R... 160 1e-37
AF186651_1(AF186651|pid:none) Drosophila melanogaster strain A1 ... 160 1e-37
(Q5BJQ5) RecName: Full=GTP-binding protein Rit2; &AF084463_1(AF... 160 1e-37
AY547438_1(AY547438|pid:none) Paracoccidioides brasiliensis Ras,... 159 2e-37
CR382123_519(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 159 2e-37
BT046608_1(BT046608|pid:none) Salmo salar clone ssal-evf-563-065... 159 2e-37
U01052_1(U01052|pid:none) Entamoeba histolytica HM-1:IMSS rap ho... 159 2e-37
AF279894_1(AF279894|pid:none) Homo sapiens PNAS-140 mRNA, partia... 159 2e-37
AY910576_1(AY910576|pid:none) Paracoccidioides brasiliensis Ras2... 159 2e-37
AE013599_4029(AE013599|pid:none) Drosophila melanogaster chromos... 159 2e-37
CR382128_675(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 159 2e-37
BC071460_1(BC071460|pid:none) Danio rerio zgc:86798, mRNA (cDNA ... 159 3e-37
AP007167_413(AP007167|pid:none) Aspergillus oryzae RIB40 genomic... 159 3e-37
CU928179_284(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 158 4e-37
BT073842_1(BT073842|pid:none) Oncorhynchus mykiss clone omyk-evo... 158 4e-37
(Q9YH09) RecName: Full=Ras-related protein ralB-A; AltName: Full... 158 5e-37
(Q4R379) RecName: Full=Ras-related protein Ral-B; Flags: Precurs... 157 6e-37
AY891516_1(AY891516|pid:none) Synthetic construct Homo sapiens c... 157 6e-37
BC146173_1(BC146173|pid:none) Bos taurus v-ral simian leukemia v... 157 8e-37
(Q9JIW9) RecName: Full=Ras-related protein Ral-B; Flags: Precurs... 157 8e-37
(Q6IP71) RecName: Full=Ras-related protein ralB-B; AltName: Full... 157 8e-37
AF045637_2(AF045637|pid:none) Caenorhabditis elegans cosmid C44C... 157 1e-36
(P36860) RecName: Full=Ras-related protein Ral-B; Flags: Precurs... 157 1e-36
(Q55CB0) RecName: Full=Ras-like protein rasU; Flags: Precursor; 157 1e-36
CU640366_102(CU640366|pid:none) Podospora anserina genomic DNA c... 156 1e-36
AK298818_1(AK298818|pid:none) Homo sapiens cDNA FLJ51696 complet... 155 2e-36
AB104910_1(AB104910|pid:none) Schizophyllum commune Ras gene for... 155 3e-36
AK138206_1(AK138206|pid:none) Mus musculus adult male hypothalam... 155 3e-36
BT057340_1(BT057340|pid:none) Salmo salar clone ssal-evd-510-237... 155 4e-36
AM920428_514(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 154 5e-36
AM270101_37(AM270101|pid:none) Aspergillus niger contig An05c001... 154 5e-36
T19453(T19453)hypothetical protein C25D7.7 - Caenorhabditis eleg... 154 7e-36
AC117075_6(AC117075|pid:none) Dictyostelium discoideum chromosom... 153 1e-35
AY266674_1(AY266674|pid:none) Aspergillus fumigatus RasB (rasB) ... 153 2e-35
FN359251_2(FN359251|pid:none) Schistosoma mansoni genome sequenc... 152 2e-35
CR380951_126(CR380951|pid:none) Candida glabrata strain CBS138 c... 152 3e-35
FN313882_1(FN313882|pid:none) Schistosoma japonicum isolate Anhu... 151 6e-35
DQ192645_1(DQ192645|pid:none) Trichomonas vaginalis RasC mRNA, c... 150 1e-34
TVFFR3(S07187) transforming protein ras3 - fruit fly (Drosophila... 147 6e-34
FN357653_12(FN357653|pid:none) Schistosoma mansoni genome sequen... 147 6e-34
AF294349_1(AF294349|pid:none) Filobasidiella neoformans Ras2 (RA... 147 1e-33
FN392320_1320(FN392320|pid:none) Pichia pastoris GS115 chromosom... 144 7e-33
AK127675_1(AK127675|pid:none) Homo sapiens cDNA FLJ45773 fis, cl... 144 7e-33
AY635992_1(AY635992|pid:none) Monacrosporium haptotylum GTPase (... 144 7e-33
AB112425_1(AB112425|pid:none) Entamoeba histolytica Ehras3 mRNA ... 144 9e-33
DQ184485_1(DQ184485|pid:none) Trichomonas vaginalis small Ras GT... 141 5e-32
AJ579363_1(AJ579363|pid:none) Echinococcus multilocularis mRNA f... 140 8e-32
CP000502_42(CP000502|pid:none) Pichia stipitis CBS 6054 chromoso... 140 8e-32
(Q75J93) RecName: Full=Circularly permutated Ras protein 1; ... 139 2e-31
AJ579364_1(AJ579364|pid:none) Echinococcus multilocularis ral ge... 139 3e-31
AJ851555_1(AJ851555|pid:none) Gallus gallus mRNA for hypothetica... 137 7e-31
FN357312_49(FN357312|pid:none) Schistosoma mansoni genome sequen... 137 9e-31
FM992690_484(FM992690|pid:none) Candida dubliniensis CD36 chromo... 137 1e-30
(Q96A58) RecName: Full=Ras-related and estrogen-regulated growth... 135 3e-30
TVGPRT(A23652) GTP-binding protein N-ras, short splice form - gu... 135 3e-30
AY814574_1(AY814574|pid:none) Schistosoma japonicum clone SJCHGC... 135 3e-30
CR382133_421(CR382133|pid:none) Debaryomyces hansenii strain CBS... 135 3e-30
L49401_1(L49401|pid:none) Microgadus tomcod RAS gene, 5' end of ... 134 6e-30
M25898_1(M25898|pid:none) Human leukemic bone marrow transformin... 134 7e-30
(Q60529) RecName: Full=GTPase HRas; AltName: Full=Transforming p... 134 7e-30
A43808(A43808) transforming protein (ras-1) - bovine (fragment) ... 132 2e-29
DQ213959_1(DQ213959|pid:none) Taeniopygia guttata clone 0061P003... 132 2e-29
K03210_1(K03210|pid:none) Human (T3M-4) cellular transforming on... 132 3e-29
(Q5R6S2) RecName: Full=GTP-binding protein Di-Ras2; AltName: Ful... 130 1e-28
U78166_1(U78166|pid:none) Human Ras-like small GTPase RIBA mRNA,... 129 2e-28
EU124620_1(EU124620|pid:none) Lutzomyia longipalpis putative Ras... 128 4e-28
(Q96HU8) RecName: Full=GTP-binding protein Di-Ras2; AltName: Ful... 128 4e-28
BC157236_1(BC157236|pid:none) Xenopus tropicalis DIRAS family, G... 127 9e-28
BC074244_1(BC074244|pid:none) Xenopus laevis MGC83985 protein, m... 127 9e-28
BC155994_1(BC155994|pid:none) Xenopus tropicalis RAS-like, estro... 127 1e-27
EF212397_1(EF212397|pid:none) Drosophila novamexicana Ras1 gene,... 125 3e-27
CR382131_1267(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 125 5e-27
U62088_1(U62088|pid:none) Felis catus ras p21 (H-ras) mRNA, part... 125 5e-27
M73692_1(M73692|pid:none) Oncorhynchus mykiss ras-1 mRNA, 5' end. 124 6e-27
BC074392_1(BC074392|pid:none) Xenopus laevis MGC84355 protein, m... 124 1e-26
(O94363) RecName: Full=GTP-binding protein rhb1; AltName: Full=G... 124 1e-26
BC044147_1(BC044147|pid:none) Danio rerio DIRAS family, GTP-bind... 123 1e-26
D88312_1(D88312|pid:none) Rattus norvegicus mRNA for Rap 1A, par... 123 2e-26
BC118820_1(BC118820|pid:none) Xenopus tropicalis DIRAS family, G... 123 2e-26
AJ575171_1(AJ575171|pid:none) Sordaria macrospora partial smu216... 123 2e-26
DQ213832_1(DQ213832|pid:none) Taeniopygia guttata clone 0061P003... 122 4e-26
DQ213831_1(DQ213831|pid:none) Taeniopygia guttata clone 0058P001... 122 4e-26
AM270393_34(AM270393|pid:none) Aspergillus niger contig An17c011... 122 4e-26
BC014704_1(BC014704|pid:none) Mus musculus cDNA clone MGC:25411 ... 121 5e-26
AK341374_1(AK341374|pid:none) Acyrthosiphon pisum ACYPI007731 mR... 121 5e-26
BX470229_1(BX470229|pid:none) Zebrafish DNA sequence from clone ... 121 7e-26
BC059505_1(BC059505|pid:none) Danio rerio zgc:73144, mRNA (cDNA ... 121 7e-26
AF283573_1(AF283573|pid:none) Aspergillus fumigatus Ras homolog ... 121 7e-26
X95440_1(X95440|pid:none) R.marmoratus R-ras gene, exon 2 and 3. 121 7e-26
EU263339_1(EU263339|pid:none) Bombyx mori RHEB mRNA, complete cds. 121 7e-26
(P24498) RecName: Full=Ras-like protein; Flags: Precursor; &S13... 120 8e-26
AK302033_1(AK302033|pid:none) Homo sapiens cDNA FLJ52173 complet... 120 1e-25
M73690_1(M73690|pid:none) Oncorhynchus mykiss ras-1 gene, 5' end. 119 2e-25
BT080780_1(BT080780|pid:none) Caligus clemensi clone ccle-evs-50... 119 3e-25
(Q91079) RecName: Full=Ras-like protein; Flags: Fragment; &X988... 119 3e-25
AK301401_1(AK301401|pid:none) Homo sapiens cDNA FLJ50711 complet... 119 3e-25
AE014297_1071(AE014297|pid:none) Drosophila melanogaster chromos... 118 4e-25
BC124281_1(BC124281|pid:none) Danio rerio zgc:153231, mRNA (cDNA... 118 4e-25
DQ414550_1(DQ414550|pid:none) Suberites domuncula Rheb gene, com... 118 6e-25
AK342025_1(AK342025|pid:none) Acyrthosiphon pisum ACYPI008618 mR... 118 6e-25
(O95057) RecName: Full=GTP-binding protein Di-Ras1; AltName: Ful... 118 6e-25
BT080639_1(BT080639|pid:none) Caligus clemensi clone ccle-evs-51... 118 6e-25
AK289370_1(AK289370|pid:none) Homo sapiens cDNA FLJ77896 complet... 117 7e-25
AY892745_1(AY892745|pid:none) Synthetic construct Homo sapiens c... 117 7e-25
(Q15382) RecName: Full=GTP-binding protein Rheb; AltName: Full=R... 117 7e-25
(Q921J2) RecName: Full=GTP-binding protein Rheb; AltName: Full=R... 117 7e-25
DQ213866_1(DQ213866|pid:none) Taeniopygia guttata clone 0058P003... 117 7e-25
BC066307_1(BC066307|pid:none) Homo sapiens Ras homolog enriched ... 116 2e-24
(Q56JV3) RecName: Full=GTP-binding protein Rheb; AltName: Full=R... 116 2e-24
AK316447_1(AK316447|pid:none) Homo sapiens cDNA, FLJ79346 comple... 115 3e-24
M73693_1(M73693|pid:none) Oncorhynchus mykiss ras-2 mRNA, 5' end. 115 3e-24
AF097941_1(AF097941|pid:none) Mesocricetus auratus N-ras gene, e... 115 3e-24
AB039919_1(AB039919|pid:none) Mus musculus rheb mRNA for Ras hom... 115 5e-24
BT075930_1(BT075930|pid:none) Caligus rogercresseyi clone crog-e... 114 6e-24
BT076341_1(BT076341|pid:none) Caligus rogercresseyi clone crog-e... 114 6e-24
BT076020_1(BT076020|pid:none) Caligus rogercresseyi clone crog-e... 114 6e-24
AP007150_599(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 114 6e-24
AP007155_660(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 114 1e-23
BT077576_1(BT077576|pid:none) Lepeophtheirus salmonis Pacific fo... 113 2e-23
BT080865_1(BT080865|pid:none) Caligus clemensi clone ccle-evs-50... 113 2e-23
AJ002963_1(AJ002963|pid:none) Trypanosoma brucei ras-like gene. 112 2e-23
BT047769_1(BT047769|pid:none) Salmo salar clone ssal-evd-509-015... 112 2e-23
FJ232920_1(FJ232920|pid:none) Mugil curema Ras (ras) mRNA, parti... 112 2e-23
AF342329_1(AF342329|pid:none) Sclerotinia sclerotiorum strain LM... 112 3e-23
FN317641_1(FN317641|pid:none) Schistosoma japonicum isolate Anhu... 112 3e-23
AK340383_1(AK340383|pid:none) Acyrthosiphon pisum ACYPI000378 mR... 112 4e-23
DQ443431_1(DQ443431|pid:none) Bombyx mori ras-related GTP bindin... 111 5e-23
AL442067_5(AL442067|pid:none) Human DNA sequence from clone RP11... 111 5e-23
(Q7YS69) RecName: Full=GTPase RhebL1; AltName: Full=Ras homolog ... 111 7e-23
BC083526_1(BC083526|pid:none) Danio rerio related RAS viral (r-r... 110 9e-23
BT081259_1(BT081259|pid:none) Caligus clemensi clone ccle-evs-51... 110 9e-23
BT080247_1(BT080247|pid:none) Caligus clemensi clone ccle-evs-50... 110 1e-22
DQ414549_1(DQ414549|pid:none) Suberites domuncula Rap1-like gene... 110 1e-22
B25229(B25229) c-H-ras 2 protein - rat (fragment) &M13355_1(M13... 110 1e-22
AY509932_1(AY509932|pid:none) Homo sapiens RHEBL1c (RHEBL1) mRNA... 109 2e-22
CR932686_1(CR932686|pid:none) Paramecium tetraurelia, Small GTPa... 109 3e-22
(Q7TNZ5) RecName: Full=GTPase RhebL1; AltName: Full=Ras homolog ... 108 4e-22
CR933442_1(CR933442|pid:none) Paramecium tetraurelia, Small GTPa... 108 4e-22
DQ836048_1(DQ836048|pid:none) Trichomonas vaginalis small Rab GT... 108 4e-22
AM920439_247(AM920439|pid:none) Penicillium chrysogenum Wisconsi... 108 6e-22
AF389109_1(AF389109|pid:none) Entamoeba histolytica small GTP-bi... 108 6e-22
T15833(T15833)hypothetical protein C54A12.4 - Caenorhabditis ele... 107 7e-22
AB171783_1(AB171783|pid:none) Macaca fascicularis brain cDNA clo... 107 7e-22
AF509341_1(AF509341|pid:none) Magnaporthe grisea putative ras-re... 107 1e-21
(Q7Z444) RecName: Full=GTPase ERas; Short=E-Ras; AltNam... 106 2e-21
I46914(I46914) gene K-ras protein - dog (fragment) &S42999_1(S4... 106 2e-21
FN320591_1(FN320591|pid:none) Schistosoma japonicum isolate Anhu... 106 2e-21
AY223134_1(AY223134|pid:none) Schistosoma japonicum SJCHGC02833 ... 106 2e-21
BC103168_1(BC103168|pid:none) Bos taurus DIRAS family, GTP-bindi... 106 2e-21
AM920437_2627(AM920437|pid:none) Penicillium chrysogenum Wiscons... 104 6e-21
(Q9D8T3) RecName: Full=GTPase RhebL1; AltName: Full=Ras homolog ... 104 6e-21
CR933474_1(CR933474|pid:none) Paramecium tetraurelia, Small GTPa... 103 1e-20
S51495(S51495;S70850)GTP-binding protein RYL1 - yeast (Yarrowia ... 103 1e-20
AY439005_1(AY439005|pid:none) Fucus distichus Rab family GTPase ... 103 1e-20
CR933475_1(CR933475|pid:none) Paramecium tetraurelia, Small GTPa... 103 1e-20
EF086613_1(EF086613|pid:none) Picea sitchensis clone WS02920_I20... 103 2e-20
(P34443) RecName: Full=GTP-binding protein Rheb homolog 1; Flags... 103 2e-20
AC139707_26(AC139707|pid:none) Medicago truncatula clone mth2-16... 102 2e-20
CR933394_1(CR933394|pid:none) Paramecium tetraurelia, Small GTPa... 102 2e-20
BT071594_1(BT071594|pid:none) Picea sitchensis clone WS02926_J12... 102 3e-20
AB054578_1(AB054578|pid:none) Entamoeba histolytica EhRab1A mRNA... 102 3e-20
EF212400_1(EF212400|pid:none) Drosophila ezoana Ras1 gene, intro... 102 3e-20
GM977155_1(GM977155|pid:none) Sequence 63 from Patent WO20081456... 102 4e-20
T33855(T33855)hypothetical protein D1037.4 - Caenorhabditis eleg... 102 4e-20
AB112929_1(AB112929|pid:none) Caenorhabditis elegans rab8 mRNA f... 102 4e-20
(P22125) RecName: Full=Ras-related protein ORAB-1; &M38393_1(M3... 101 5e-20
BT059700_1(BT059700|pid:none) Salmo salar clone ssal-rgf-002-342... 101 5e-20
D12547_1(D12547|pid:none) Pisum sativum mRNA for GTP-binding pro... 101 5e-20
(A8XAD0) RecName: Full=GTP-binding protein Rheb homolog 1; AltNa... 101 5e-20
AJ308736_1(AJ308736|pid:none) Plasmodium falciparum mRNA for put... 101 5e-20
BC045014_1(BC045014|pid:none) Xenopus laevis RAB1, member RAS on... 101 5e-20
AL606522_3(AL606522|pid:none) Mouse DNA sequence from clone RP23... 101 7e-20
DQ214474_1(DQ214474|pid:none) Taeniopygia guttata clone 0063P003... 101 7e-20
J02998_1(J02998|pid:none) Rat ras-related protein mRNA, clone NT... 101 7e-20
EF147099_1(EF147099|pid:none) Populus trichocarpa clone WS01227_... 101 7e-20
BC095376_1(BC095376|pid:none) Danio rerio zgc:110699, mRNA (cDNA... 101 7e-20
AY896243_1(AY896243|pid:none) Trichomonas vaginalis strain G3 sm... 101 7e-20
(P62820) RecName: Full=Ras-related protein Rab-1A; AltName: Full... 101 7e-20
GN106165_1(GN106165|pid:none) Sequence 10946 from Patent WO20090... 100 9e-20
AC104285_6(AC104285|pid:none) Oryza sativa (japonica cultivar-gr... 100 9e-20
(Q52NJ2) RecName: Full=Ras-related protein Rab-1A; &AY996813_1(... 100 9e-20
GN106103_1(GN106103|pid:none) Sequence 10884 from Patent WO20090... 100 1e-19
BC097013_1(BC097013|pid:none) Danio rerio zgc:86773, mRNA (cDNA ... 100 1e-19
BT046606_1(BT046606|pid:none) Salmo salar clone ssal-rgb2-504-07... 100 1e-19
GN106151_1(GN106151|pid:none) Sequence 10932 from Patent WO20090... 100 1e-19
GM977161_1(GM977161|pid:none) Sequence 69 from Patent WO20081456... 100 1e-19
BC155534_1(BC155534|pid:none) Xenopus tropicalis hypothetical pr... 100 1e-19
AJ237914_1(AJ237914|pid:none) Plasmodium falciparum putative rab... 100 2e-19
(Q39570) RecName: Full=GTP-binding protein YPTC4; &JC4106(JC410... 100 2e-19
AF201953_1(AF201953|pid:none) Plasmodium falciparum isolate FCC1... 100 2e-19
GN105821_1(GN105821|pid:none) Sequence 10602 from Patent WO20090... 100 2e-19
AK151085_1(AK151085|pid:none) Mus musculus bone marrow macrophag... 100 2e-19
(P40392) RecName: Full=Ras-related protein RIC1; &AK243597_1(AK... 100 2e-19
DQ414556_1(DQ414556|pid:none) Suberites domuncula Rab1 gene, com... 100 2e-19
AM910992_200(AM910992|pid:none) Plasmodium knowlesi strain H chr... 100 2e-19
BT044621_1(BT044621|pid:none) Salmo salar clone ssal-rgf-001-034... 100 2e-19
AP007167_41(AP007167|pid:none) Aspergillus oryzae RIB40 genomic ... 100 2e-19
DQ214475_1(DQ214475|pid:none) Taeniopygia guttata clone 0058P004... 100 2e-19
AY896281_1(AY896281|pid:none) Trichomonas vaginalis strain G3 sm... 100 2e-19
EU284879_1(EU284879|pid:none) TSA: Elaeis guineensis EgEfMPOB000... 99 3e-19
EU365390_1(EU365390|pid:none) Euplotes octocarinatus Rab GTPase ... 99 3e-19
FN315276_1(FN315276|pid:none) Schistosoma japonicum isolate Anhu... 99 3e-19
BC081268_1(BC081268|pid:none) Xenopus laevis cDNA clone MGC:8640... 99 3e-19
(Q08AT1) RecName: Full=Ras-like protein family member 12; &BC12... 99 3e-19
DQ397201_1(DQ397201|pid:none) Saccharum officinarum small GTP bi... 99 3e-19
BT076429_1(BT076429|pid:none) Caligus rogercresseyi clone crog-e... 99 3e-19
S06147(S06147;S03189)GTP-binding protein rab1B - rat 99 3e-19
BC084211_1(BC084211|pid:none) Xenopus laevis hypothetical LOC495... 99 5e-19
AK129477_1(AK129477|pid:none) Mus musculus mRNA for mKIAA3012 pr... 99 5e-19
(P61019) RecName: Full=Ras-related protein Rab-2A; &(P61105) Re... 99 5e-19
EF212398_1(EF212398|pid:none) Drosophila lummei Ras1 gene, intro... 99 5e-19
(Q90965) RecName: Full=Ras-related protein Rab-2A; &S52325(S523... 99 5e-19
BT057068_1(BT057068|pid:none) Salmo salar clone ssal-eve-570-039... 99 5e-19
(Q92928) RecName: Full=Putative Ras-related protein Rab-1C; ... 99 5e-19
AB079024_1(AB079024|pid:none) Nicotiana tabacum mRNA for ras-rel... 99 5e-19
GM977167_1(GM977167|pid:none) Sequence 75 from Patent WO20081456... 99 5e-19
BT043649_1(BT043649|pid:none) Salmo salar clone HM5_0924 RAB2A, ... 99 5e-19
U41269_1(U41269|pid:none) Plasmodium falciparum Rab1 protein (Pf... 99 5e-19
BC071068_1(BC071068|pid:none) Xenopus laevis MGC78967 protein, m... 99 5e-19
(P53994) RecName: Full=Ras-related protein Rab-2A; &AB232585_1(... 99 5e-19
GM977141_1(GM977141|pid:none) Sequence 49 from Patent WO20081456... 99 5e-19
CR932818_1(CR932818|pid:none) Paramecium tetraurelia, Small GTPa... 99 5e-19
AY891305_1(AY891305|pid:none) Synthetic construct Homo sapiens c... 99 5e-19
S19438(S19438;S27137)hypothetical protein YCR027c - yeast (Sacch... 98 6e-19
CR933419_1(CR933419|pid:none) Paramecium tetraurelia, Small GTPa... 98 6e-19
AB197058_1(AB197058|pid:none) Entamoeba histolytica gene for sma... 98 6e-19
L48181_1(L48181|pid:none) Brassica campestris L. pekinensis ypt-... 98 6e-19
AP008213_447(AP008213|pid:none) Oryza sativa (japonica cultivar-... 98 6e-19
AK104346_1(AK104346|pid:none) Oryza sativa Japonica Group cDNA c... 98 6e-19
GN105981_1(GN105981|pid:none) Sequence 10762 from Patent WO20090... 98 6e-19
BT070243_1(BT070243|pid:none) Picea sitchensis clone WS02711_M12... 98 6e-19
D38625(D38625)GTP-binding protein o-rab1 - electric ray (Discopy... 98 8e-19
BT070448_1(BT070448|pid:none) Picea sitchensis clone WS0272_O15 ... 98 8e-19
EF212395_1(EF212395|pid:none) Drosophila americana Ras1 gene, in... 98 8e-19
CR932579_1(CR932579|pid:none) Paramecium tetraurelia, Small GTPa... 98 8e-19
BT035355_1(BT035355|pid:none) Zea mays full-length cDNA clone ZM... 98 8e-19
EF125738_1(EF125738|pid:none) Nyctotherus ovalis Rab A61 gene, c... 98 8e-19
GM977163_1(GM977163|pid:none) Sequence 71 from Patent WO20081456... 98 8e-19
AC159407_36(AC159407|pid:none) Trypanosoma brucei chromosome 8 c... 98 8e-19
EF103367_1(EF103367|pid:none) Haliotis discus discus Ras-related... 98 8e-19
AB079020_1(AB079020|pid:none) Nicotiana tabacum mRNA for ras-rel... 98 8e-19
EF144772_1(EF144772|pid:none) Populus trichocarpa clone WS01118_... 98 8e-19
BC074172_1(BC074172|pid:none) Xenopus laevis MGC81985 protein, m... 98 8e-19
(Q9D1G1) RecName: Full=Ras-related protein Rab-1B; &AB232584_1(... 97 1e-18
AK042020_1(AK042020|pid:none) Mus musculus 3 days neonate thymus... 97 1e-18
AC117265_12(AC117265|pid:none) Oryza sativa (japonica cultivar-g... 97 1e-18
GM977153_1(GM977153|pid:none) Sequence 61 from Patent WO20081456... 97 1e-18
BT075214_1(BT075214|pid:none) Osmerus mordax clone omor-eva-502-... 97 1e-18

>(P32252) RecName: Full=Ras-like protein rasB; Flags: Precursor;
&M96622_1(M96622|pid:none)
Length = 197

Score = 338 bits (866), Expect = 3e-91
Identities = 173/197 (87%), Positives = 173/197 (87%)
Frame = +3

Query: 408 MSVSNEYKLXXXXXXXXXKSALTIQFIQNHFIEEYDPTIEDSYRRQCQVDEDTCLLDILD 587
MSVSNEYKL KSALTIQFIQNHFIEEYDPTIEDSYRRQCQVDEDTCLLDILD
Sbjct: 1 MSVSNEYKLVVMGGGGVGKSALTIQFIQNHFIEEYDPTIEDSYRRQCQVDEDTCLLDILD 60

Query: 588 TAGQDDYSAMRDQYMRTGQGFLCVYDVTSRTSFEEINVVREQIIRVKDNDKVPIVLVGNK 767
TAGQDDYSAMRDQYMRTGQGFLCVYDVTSRTSFEEINVVREQIIRVKDNDKVPIVLVGNK
Sbjct: 61 TAGQDDYSAMRDQYMRTGQGFLCVYDVTSRTSFEEINVVREQIIRVKDNDKVPIVLVGNK 120

Query: 768 CDLENLREVTEGEGSELAKSFSVPFLETSAKKRLNVDECFFEVVREIKKSLKEPGRSXXX 947
CDLENLREVTEGEGSELAKSFSVPFLETSAKKRLNVDECFFEVVREIKKSLKEPGRS
Sbjct: 121 CDLENLREVTEGEGSELAKSFSVPFLETSAKKRLNVDECFFEVVREIKKSLKEPGRSKKD 180

Query: 948 XXXXXXXXXXXXDCLIL 998
DCLIL
Sbjct: 181 KKGGILKKFKGGDCLIL 197

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,288,459,610
Number of extensions: 19934698
Number of successful extensions: 68334
Number of sequences better than 10.0: 3309
Number of HSP's gapped: 65792
Number of HSP's successfully gapped: 3327
Length of query: 444
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 312
Effective length of database: 623,955,076
Effective search space: 194673983712
Effective search space used: 194673983712
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.95 gvh: 0.18 alm: 0.46 top: 1.20 tms: 0.00 mit: 0.40 mip: 0.00
nuc: 2.28 erl: 0.00 erm: 0.40 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

76.0 %: nuclear
12.0 %: cytoplasmic
8.0 %: mitochondrial
4.0 %: cytoskeletal

>> prediction for Contig-U12227-1 is nuc

VS (DIR, S) 3
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 1
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 12
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0