Contig-U12183-1
Contig ID Contig-U12183-1
Contig update 2002.12.18
Contig sequence
>Contig-U12183-1 (Contig-U12183-1Q) /CSM_Contig/Contig-U12183-1Q.Seq.d
GATCAAAAAGATTATATTATTTTTTGCAGTTTTAATTGCAATTGTAATTG
GTCAACAACCATTGAATGTTGTACCATATCCTCAACAAGTTTCTATTGGT
ACTTGTGTCATCCCAGTTGCACCAGGATCAATTCTTATTGAATCAAATAT
TGAATCAGCAACATTTAGTGTTTCAATGGATAGATATACCAATTTATTCT
TCCCATTTAGTAATGAAAGTGAGCCATCATCAAATGAAAGTTTTTTACTT
TCAGTTACAATCTATAGTGATGATGAAACTCTTCAATTAGGAATTGATGA
AAGTTATTCATTAAGCATTGAACAAGGTTCCTACCAATTGAAAGCAACCA
ACATCTATGGTGCAATGAGAGGTTTGGAAACTTTCAAACAATTGATCGTC
TATAATGAATTGGAAAATAGTTATTCAATTGTATGCGTATCAATTAGTGA
TTCACCAAGATATCCATGGAGAGGTTTCATGGTTGATTCGGCCCGTCATT
ACATCCCAAAGAATATGATACTTCATATGATCGATTCATTAGGGTTCAGT
AAATTCAATACATTACATTGGCATATGGTTGATGCTGTTGCATTCCCAGT
TGAA----------CCTGAATTCGATATACCAGGCCATGCTGCTGCTTGG
GGAATTGGTTATCCAGAATTGGTTGCAACTTGTCCAGATTATGCTGCAAA
TGTTAACAATATTCCATTAGATATTTCAAATCCAGCTACCTTTACATTCA
TTCAAAATCTTTTCACTGAAATTGCACCATTATTCATTGATAATTATTTC
CATACTGGTGGTGATGAATTAGTTACTGGTTGTTGGCTTGAAGATCCAGC
AATTGCAAATTGGATGACAAAAATGGGTTTCTCAACTACTGATGCTTTCC
AATATTTTGAAAATAATTTGGATGTTACTATGAAATCAATTAATCGTACT
AAAATTACATGGAATGATCCAATTGATTATGGTGTTCAATTAAATCCAGA
AACATTAGTTCAAGTTTGGAGTAGTGGTTCAGATTTACAAGGAATTGTAA
ATAGTGGTTATAAAGCACTTGTATCATTTGCATGGTATTTAGATAAACAA
AATCCAGATAATAACATTCATTATGAATGGCAAGATACTTGGCAAGATTT
TTATGCTGCTGATCCAACAAATAATATCTCTACAAACGCTGAAAATATTA
TTGGTGGTGAAGCAACAATGTGGGCTGAACAAATTAATCAAGTAAATTGG
GATGTTAGAGTTTGGCCAAGAGCAATCGGTATCGCTGAAAGATTATGGTC
TGCTCAAAGTGTTAACTCTGTCTCTTTAGCACTCCCACGTATTGGTCATT
TTACTTGTGATCTCTCACGTCGTGGTATTCAATCTGGTCCATTATTCCCA
GACTATTGTCCAATGCAAGATGATTTGGTTTTCACTATGAAACCAAATAC
TAAACTTTCAAAATCTGAAATTAAATTAATTTTAAGTAAATAAATAAATA
AATTTAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Gap gap included
Contig length 1552
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 5230740
End point 5232210
Strand (PLUS/MINUS) PLUS
Number of clones 12
Number of EST 14
Link to clone list U12183
List of clone(s)

est1=SLJ333F,1,280
est2=VFI752F,14,604
est3=VSI257F,605,1193
est4=VHI840Z,677,1376
est5=VFJ394Z,720,1388
est6=VFN145Z,731,1380
est7=VFI752Z,732,1513
est8=VFK861Z,733,1374
est9=VHI640Z,735,1392
est10=VFI337Z,830,1394
est11=VSB886Z,1090,1513
est12=VSB414Z,1104,1525
est13=VSC512Z,1256,1553
est14=SLJ333Z,1265,1519
Translated Amino Acid sequence
IKKIILFFAVLIAIVIGQQPLNVVPYPQQVSIGTCVIPVAPGSILIESNIESATFSVSMD
RYTNLFFPFSNESEPSSNESFLLSVTIYSDDETLQLGIDESYSLSIEQGSYQLKATNIYG
AMRGLETFKQLIVYNELENSYSIVCVSISDSPRYPWRGFMVDSARHYIPKNMILHMIDSL
GFSKFNTLHWHMVDAVAFPVE---

---PEFDIPGHAAAWGIGYPELVATCPDYAANVNNIPLDISNPATFTFIQNLFTEIAPLF
IDNYFHTGGDELVTGCWLEDPAIANWMTKMGFSTTDAFQYFENNLDVTMKSINRTKITWN
DPIDYGVQLNPETLVQVWSSGSDLQGIVNSGYKALVSFAWYLDKQNPDNNIHYEWQDTWQ
DFYAADPTNNISTNAENIIGGEATMWAEQINQVNWDVRVWPRAIGIAERLWSAQSVNSVS
LALPRIGHFTCDLSRRGIQSGPLFPDYCPMQDDLVFTMKPNTKLSKSEIKLILSK*inkf
kikkkkkkkkkkkkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
dqkdyiifcsfncncnwsttiecctisstsfywylchpsctrinsy*iky*isni*cfng
*iyqfilpi***k*aiik*kfftfsynl****nssirn**klfikh*trflpiesnqhlw
cnerfgnfqtidrl**igk*lfncmrin**ftkismerfhg*fgpslhpkeydtsydrfi
rvq*iqyitlayg*cccips*---

---PEFDIPGHAAAWGIGYPELVATCPDYAANVNNIPLDISNPATFTFIQNLFTEIAPLF
IDNYFHTGGDELVTGCWLEDPAIANWMTKMGFSTTDAFQYFENNLDVTMKSINRTKITWN
DPIDYGVQLNPETLVQVWSSGSDLQGIVNSGYKALVSFAWYLDKQNPDNNIHYEWQDTWQ
DFYAADPTNNISTNAENIIGGEATMWAEQINQVNWDVRVWPRAIGIAERLWSAQSVNSVS
LALPRIGHFTCDLSRRGIQSGPLFPDYCPMQDDLVFTMKPNTKLSKSEIKLILSK*inkf
kikkkkkkkkkkkkkkkkk

Frame B:
IKKIILFFAVLIAIVIGQQPLNVVPYPQQVSIGTCVIPVAPGSILIESNIESATFSVSMD
RYTNLFFPFSNESEPSSNESFLLSVTIYSDDETLQLGIDESYSLSIEQGSYQLKATNIYG
AMRGLETFKQLIVYNELENSYSIVCVSISDSPRYPWRGFMVDSARHYIPKNMILHMIDSL
GFSKFNTLHWHMVDAVAFPVE---

---lnsiyqamlllgelviqnwlqlvqimlqmltifh*ifqiqlplhsfkifslklhhys
liiisilvvmn*llvvglkiqqlqig*qkwvsqllmlsnilkiiwmll*nqlivlklhgm
iqlimvfn*iqkh*fkfgvvvqiykel*ivvikhlyhlhgi*inkiqiitfimngkilgk
ifmlliqqiislqtlkillvvkqqcglnklik*igmlefgqeqsvslkdygllkvltlsl
*hshvlvillvishvvvfnlvhysqtivqckmiwfsl*nqilnfqnlkln*f*vnk*inl
k*kkkkkkkkkkkkkkkk

Frame C:
skrlyyflqf*lql*lvnnh*mlyhilnkfllvlvssqlhqdqfllnqilnqqhlvfqwi
dipiysshlvmkvshhqmkvfyfqlqsivmmklfn*elmkvih*alnkvptn*kqptsmv
q*evwklsnn*ssimnwkiviqlyayqlvihqdihgevswlirpvitsqri*yfi*sih*
gsvnsihyigiwlmllhsql---

---*irytrpccclgnwlsrigcnlsrlcckc*qysiryfkssylyihsksfh*nctiih
**lfpyww**isywlla*rssncklddkngflny*cfpif*k*fgcyyein*sy*nyme*
sn*lwcsiksrnisssle*wfrftrnck*wl*stciicmvfr*tksr**hsl*marylar
flcc*snk*ylykr*kyyww*snnvg*tn*ssklgc*slaksnryr*kimvcskc*lclf
stptywsfyl*sltswysiwsiiprllsnar*fgfhyetky*tfki*n*infk*ink*i*
nkkkkkkkkkkkkkkkkk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U12183-1 (Contig-U12183-1Q)
/CSM_Contig/Contig-U12183-1Q.Seq.d
(1562 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U12183-1 (Contig-U12183-1Q) /CSM_Contig/Conti... 2801 0.0
Contig-U10989-1 (Contig-U10989-1Q) /CSM_Contig/Conti... 125 2e-28
Contig-U12085-1 (Contig-U12085-1Q) /CSM_Contig/Conti... 36 0.11
Contig-U10713-1 (Contig-U10713-1Q) /CSM_Contig/Conti... 36 0.11
Contig-U06825-1 (Contig-U06825-1Q) /CSM_Contig/Conti... 36 0.11
Contig-U05816-1 (Contig-U05816-1Q) /CSM_Contig/Conti... 36 0.11
Contig-U05209-1 (Contig-U05209-1Q) /CSM_Contig/Conti... 36 0.11
Contig-U13259-1 (Contig-U13259-1Q) /CSM_Contig/Conti... 34 0.44
Contig-U12675-1 (Contig-U12675-1Q) /CSM_Contig/Conti... 34 0.44
Contig-U14895-1 (Contig-U14895-1Q) /CSM_Contig/Conti... 32 1.7

>Contig-U12183-1 (Contig-U12183-1Q) /CSM_Contig/Contig-U12183-1Q.Seq.d
Length = 1562

Score = 2801 bits (1413), Expect = 0.0
Identities = 1443/1443 (100%)
Strand = Plus / Plus


Query: 1 gatcaaaaagattatattattttttgcagttttaattgcaattgtaattggtcaacaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatcaaaaagattatattattttttgcagttttaattgcaattgtaattggtcaacaacc 60


Query: 61 attgaatgttgtaccatatcctcaacaagtttctattggtacttgtgtcatcccagttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgaatgttgtaccatatcctcaacaagtttctattggtacttgtgtcatcccagttgc 120


Query: 121 accaggatcaattcttattgaatcaaatattgaatcagcaacatttagtgtttcaatgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accaggatcaattcttattgaatcaaatattgaatcagcaacatttagtgtttcaatgga 180


Query: 181 tagatataccaatttattcttcccatttagtaatgaaagtgagccatcatcaaatgaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tagatataccaatttattcttcccatttagtaatgaaagtgagccatcatcaaatgaaag 240


Query: 241 ttttttactttcagttacaatctatagtgatgatgaaactcttcaattaggaattgatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttttttactttcagttacaatctatagtgatgatgaaactcttcaattaggaattgatga 300


Query: 301 aagttattcattaagcattgaacaaggttcctaccaattgaaagcaaccaacatctatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagttattcattaagcattgaacaaggttcctaccaattgaaagcaaccaacatctatgg 360


Query: 361 tgcaatgagaggtttggaaactttcaaacaattgatcgtctataatgaattggaaaatag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgcaatgagaggtttggaaactttcaaacaattgatcgtctataatgaattggaaaatag 420


Query: 421 ttattcaattgtatgcgtatcaattagtgattcaccaagatatccatggagaggtttcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttattcaattgtatgcgtatcaattagtgattcaccaagatatccatggagaggtttcat 480


Query: 481 ggttgattcggcccgtcattacatcccaaagaatatgatacttcatatgatcgattcatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggttgattcggcccgtcattacatcccaaagaatatgatacttcatatgatcgattcatt 540


Query: 541 agggttcagtaaattcaatacattacattggcatatggttgatgctgttgcattcccagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agggttcagtaaattcaatacattacattggcatatggttgatgctgttgcattcccagt 600


Query: 601 tgaannnnnnnnnncctgaattcgatataccaggccatgctgctgcttggggaattggtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgaannnnnnnnnncctgaattcgatataccaggccatgctgctgcttggggaattggtt 660


Query: 661 atccagaattggttgcaacttgtccagattatgctgcaaatgttaacaatattccattag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atccagaattggttgcaacttgtccagattatgctgcaaatgttaacaatattccattag 720


Query: 721 atatttcaaatccagctacctttacattcattcaaaatcttttcactgaaattgcaccat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atatttcaaatccagctacctttacattcattcaaaatcttttcactgaaattgcaccat 780


Query: 781 tattcattgataattatttccatactggtggtgatgaattagttactggttgttggcttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tattcattgataattatttccatactggtggtgatgaattagttactggttgttggcttg 840


Query: 841 aagatccagcaattgcaaattggatgacaaaaatgggtttctcaactactgatgctttcc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aagatccagcaattgcaaattggatgacaaaaatgggtttctcaactactgatgctttcc 900


Query: 901 aatattttgaaaataatttggatgttactatgaaatcaattaatcgtactaaaattacat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aatattttgaaaataatttggatgttactatgaaatcaattaatcgtactaaaattacat 960


Query: 961 ggaatgatccaattgattatggtgttcaattaaatccagaaacattagttcaagtttgga 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ggaatgatccaattgattatggtgttcaattaaatccagaaacattagttcaagtttgga 1020


Query: 1021 gtagtggttcagatttacaaggaattgtaaatagtggttataaagcacttgtatcatttg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gtagtggttcagatttacaaggaattgtaaatagtggttataaagcacttgtatcatttg 1080


Query: 1081 catggtatttagataaacaaaatccagataataacattcattatgaatggcaagatactt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 catggtatttagataaacaaaatccagataataacattcattatgaatggcaagatactt 1140


Query: 1141 ggcaagatttttatgctgctgatccaacaaataatatctctacaaacgctgaaaatatta 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ggcaagatttttatgctgctgatccaacaaataatatctctacaaacgctgaaaatatta 1200


Query: 1201 ttggtggtgaagcaacaatgtgggctgaacaaattaatcaagtaaattgggatgttagag 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ttggtggtgaagcaacaatgtgggctgaacaaattaatcaagtaaattgggatgttagag 1260


Query: 1261 tttggccaagagcaatcggtatcgctgaaagattatggtctgctcaaagtgttaactctg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 tttggccaagagcaatcggtatcgctgaaagattatggtctgctcaaagtgttaactctg 1320


Query: 1321 tctctttagcactcccacgtattggtcattttacttgtgatctctcacgtcgtggtattc 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 tctctttagcactcccacgtattggtcattttacttgtgatctctcacgtcgtggtattc 1380


Query: 1381 aatctggtccattattcccagactattgtccaatgcaagatgatttggttttcactatga 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 aatctggtccattattcccagactattgtccaatgcaagatgatttggttttcactatga 1440


Query: 1441 aac 1443
|||
Sbjct: 1441 aac 1443


>Contig-U10989-1 (Contig-U10989-1Q) /CSM_Contig/Contig-U10989-1Q.Seq.d
Length = 2550

Score = 125 bits (63), Expect = 2e-28
Identities = 156/187 (83%)
Strand = Plus / Plus


Query: 1118 tcattatgaatggcaagatacttggcaagatttttatgctgctgatccaacaaataatat 1177
||||||||||||||||||||||||| ||||||| ||||| | ||||||| | |||||
Sbjct: 1314 tcattatgaatggcaagatacttgggaagatttctatgcatcagatccaagattaaatat 1373


Query: 1178 ctctacaaacgctgaaaatattattggtggtgaagcaacaatgtgggctgaacaaattaa 1237
|| |||| |||||||||||| | ||||||||||| || |||| | ||||||| |||
Sbjct: 1374 tacttcaaatgctgaaaatattttaggtggtgaagctactatgtttggtgaacaagttag 1433


Query: 1238 tcaagtaaattgggatgttagagtttggccaagagcaatcggtatcgctgaaagattatg 1297
| || |||||||||| ||||||||||||||||| || |||||| |||||||||||||
Sbjct: 1434 taccgtcaattgggatgccagagtttggccaagagctattggtatctctgaaagattatg 1493


Query: 1298 gtctgct 1304
|||||||
Sbjct: 1494 gtctgct 1500


Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus


Query: 889 ctgatgctttccaatattttgaaaataatttggatgttactatgaaatcaattaatcgta 948
|||||||||| |||||||||||| || | || ||||| | | ||||||||||||||||||
Sbjct: 1079 ctgatgcttttcaatattttgaagatcaattagatgtaattttgaaatcaattaatcgta 1138


Query: 949 ctaaaattacatggaatgat 968
||||||| | |||||||||
Sbjct: 1139 ctaaaatcgcctggaatgat 1158


Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus


Query: 353 atctatggtgcaatgagaggtttggaaactttcaaacaa 391
||||||||||||||||||||||| ||||| |||||||||
Sbjct: 445 atctatggtgcaatgagaggtttagaaacattcaaacaa 483


Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus


Query: 789 gataattatttccatactggtggtgatgaatt 820
|||| |||||||||||||||||||||||||||
Sbjct: 979 gatagttatttccatactggtggtgatgaatt 1010


Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Plus


Query: 266 agtgatgatgaaactcttcaattaggaattgatgaaagtta 306
|||||||||||||| ||| |||| || ||||||||||||||
Sbjct: 358 agtgatgatgaaacacttgaattgggtattgatgaaagtta 398


Score = 48.1 bits (24), Expect = 3e-05
Identities = 57/68 (83%)
Strand = Plus / Plus


Query: 1332 ctcccacgtattggtcattttacttgtgatctctcacgtcgtggtattcaatctggtcca 1391
||||| |||||||| || || |||||||| | || |||||||||||| |||||||||
Sbjct: 1528 ctccctcgtattggccaattctcttgtgatatgtctcgtcgtggtatttcctctggtcca 1587


Query: 1392 ttattccc 1399
||||||||
Sbjct: 1588 ttattccc 1595


Score = 48.1 bits (24), Expect = 3e-05
Identities = 111/140 (79%)
Strand = Plus / Plus


Query: 461 tatccatggagaggtttcatggttgattcggcccgtcattacatcccaaagaatatgata 520
|||| ||||||||| || |||||||| |||||||||| | | |||||||||||| ||
Sbjct: 553 tatcaatggagaggattgttggttgataatgcccgtcatttccttccaaagaatatggta 612


Query: 521 cttcatatgatcgattcattagggttcagtaaattcaatacattacattggcatatggtt 580
|||||||| || || || | || | | |||||||||||| | ||||||||| | |
Sbjct: 613 cttcatattattgactcgatgggttataataaattcaatactatgcattggcatttaata 672


Query: 581 gatgctgttgcattcccagt 600
||| ||||||||||||||||
Sbjct: 673 gatactgttgcattcccagt 692


Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus


Query: 54 aacaaccattgaatgttgtaccatatcctcaacaagtt 91
|||||||||| ||||| ||||||||||| ||| |||||
Sbjct: 143 aacaaccattaaatgtagtaccatatccacaagaagtt 180


Score = 32.2 bits (16), Expect = 1.7
Identities = 28/32 (87%)
Strand = Plus / Plus


Query: 146 aatattgaatcagcaacatttagtgtttcaat 177
|||||||||||| ||| ||| ||| |||||||
Sbjct: 235 aatattgaatcaacaatattaagtatttcaat 266


Score = 32.2 bits (16), Expect = 1.7
Identities = 22/24 (91%)
Strand = Plus / Plus


Query: 711 attccattagatatttcaaatcca 734
|||||||||||| ||||||||||
Sbjct: 901 attccattagattgttcaaatcca 924


>Contig-U12085-1 (Contig-U12085-1Q) /CSM_Contig/Contig-U12085-1Q.Seq.d
Length = 1563

Score = 36.2 bits (18), Expect = 0.11
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 797 tttccatactggtggtgatgaa 818
|||||||| |||||||||||||
Sbjct: 729 tttccatattggtggtgatgaa 750


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 17,633
Number of Sequences: 6905
Number of extensions: 17633
Number of successful extensions: 1736
Number of sequences better than 10.0: 169
length of query: 1562
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1546
effective length of database: 5,564,391
effective search space: 8602548486
effective search space used: 8602548486
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.29
Homology vs DNA
Query= Contig-U12183-1 (Contig-U12183-1Q) /CSM_Contig/Contig-U12183-1Q.Seq.d
(1562 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(J04065) D.discoideum beta-N-acetylhexosaminidase (nagA) mRN... 1635 0.0 1
(BJ441984) Dictyostelium discoideum cDNA clone:ddv48p10, 3' ... 1380 0.0 1
(BJ432403) Dictyostelium discoideum cDNA clone:ddv18h13, 3' ... 1378 0.0 1
(BJ432807) Dictyostelium discoideum cDNA clone:ddv19l23, 3' ... 1326 0.0 1
(BJ441981) Dictyostelium discoideum cDNA clone:ddv48o10, 3' ... 1304 0.0 1
(BJ435508) Dictyostelium discoideum cDNA clone:ddv27i11, 3' ... 1281 0.0 1
(BJ433680) Dictyostelium discoideum cDNA clone:ddv22j16, 3' ... 1273 0.0 1
(BJ414268) Dictyostelium discoideum cDNA clone:ddv18h13, 5' ... 1172 0.0 1
(AU268404) Dictyostelium discoideum vegetative cDNA clone:VS... 1168 0.0 1
(BJ432025) Dictyostelium discoideum cDNA clone:ddv17j09, 3' ... 1112 0.0 1
(AU262320) Dictyostelium discoideum vegetative cDNA clone:VS... 674 0.0 1
(AU262004) Dictyostelium discoideum vegetative cDNA clone:VS... 638 e-178 1
(AU060344) Dictyostelium discoideum slug cDNA, clone SLJ333. 555 e-153 1
(AU053653) Dictyostelium discoideum slug cDNA, clone SLJ333. 327 7e-85 1
(AU262613) Dictyostelium discoideum vegetative cDNA clone:VS... 287 6e-73 1
(BJ443233) Dictyostelium discoideum cDNA clone:ddv52f08, 3' ... 80 6e-58 6
(BJ429154) Dictyostelium discoideum cDNA clone:ddv2d17, 3' e... 80 3e-50 5
(BJ433331) Dictyostelium discoideum cDNA clone:ddv21p11, 3' ... 80 5e-48 5
(BJ345778) Dictyostelium discoideum cDNA clone:dda28e19, 3' ... 80 7e-48 5
(AU053545) Dictyostelium discoideum slug cDNA, clone SLI877. 80 5e-38 4
(BJ328597) Dictyostelium discoideum cDNA clone:dda28e19, 5' ... 62 2e-31 6
(BJ424397) Dictyostelium discoideum cDNA clone:ddv52f08, 5' ... 62 1e-29 5
(BJ429872) Dictyostelium discoideum cDNA clone:ddv5m06, 3' e... 80 5e-29 3
(BJ327329) Dictyostelium discoideum cDNA clone:dda20e02, 5' ... 62 7e-28 5
(BJ411629) Dictyostelium discoideum cDNA clone:ddv5m06, 5' e... 62 1e-22 4
(BJ410970) Dictyostelium discoideum cDNA clone:ddv2d17, 5' e... 62 7e-22 4
(BJ417328) Dictyostelium discoideum cDNA clone:ddv30a12, 5' ... 62 8e-22 4
(BJ415115) Dictyostelium discoideum cDNA clone:ddv21p11, 5' ... 56 7e-18 4
(BJ416340) Dictyostelium discoideum cDNA clone:ddv25i21, 5' ... 50 2e-12 4
(AU062278) Dictyostelium discoideum slug cDNA, clone SLI877. 50 2e-10 3
(FD723456) CAAA632.fwd CAAA Petromyzon marinus Petromyzon ma... 42 0.093 2
(ER358581) 1092351335286 Global-Ocean-Sampling_GS-34-01-01-1... 40 0.28 3
(CP000685) Flavobacterium johnsoniae UW101, complete genome. 36 0.45 2
(AM426491) Vitis vinifera contig VV78X128064.6, whole genome... 48 1.0 1
(AJ417748) Entamoeba histolytica hexB gene for beta-hexosami... 48 1.0 1
(AP003098) Homo sapiens genomic DNA, chromosome 11q, clone:R... 48 1.0 1
(AC123396) Rattus norvegicus clone CH230-279F1, WORKING DRAF... 48 1.0 1
(AC120941) Rattus norvegicus clone CH230-282K24, WORKING DRA... 48 1.0 1
(AC009546) Homo sapiens chromosome 11 clone RP11-141D23 map ... 48 1.0 1
(BH157493) ENTTE48TF Entamoeba histolytica Sheared DNA Entam... 48 1.0 1
(AZ691428) ENTJY38TR Entamoeba histolytica Sheared DNA Entam... 48 1.0 1
(AZ551404) ENTGT88TF Entamoeba histolytica Sheared DNA Entam... 48 1.0 1
(AZ547356) ENTEP23TR Entamoeba histolytica Sheared DNA Entam... 48 1.0 1
(AZ540775) ENTCZ66TR Entamoeba histolytica Sheared DNA Entam... 48 1.0 1
(AZ532030) ENTBN88TR Entamoeba histolytica Sheared DNA Entam... 48 1.0 1
(AC175168) Bos taurus clone CH240-212O3, WORKING DRAFT SEQUE... 40 2.1 4
(AC131303) Mus musculus chromosome 1, clone RP24-119O19, com... 46 4.0 1
(AC123556) Mus musculus BAC clone RP23-176M9 from 1, complet... 46 4.0 1
(CU469246) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 4.0 1
(AC176934) Strongylocentrotus purpuratus clone R3-1104E6, WO... 46 4.0 1
(EJ959447) 1093018994954 Global-Ocean-Sampling_GS-30-02-01-1... 46 4.0 1
(EJ944927) 1093018908746 Global-Ocean-Sampling_GS-30-02-01-1... 46 4.0 1
(CW927250) EDCBK76TF A. castellanii, 6-8 kb library from tot... 46 4.0 1
(CW924384) EDCB407TF A. castellanii, 6-8 kb library from tot... 46 4.0 1
(CX698782) ydb82b05.y2 Sea urchin EST Lib1 Strongylocentrotu... 46 4.0 1
(CX685246) yde30a09.y2 Sea urchin EST Lib1 Strongylocentrotu... 46 4.0 1
(CX682480) ydf11e06.y1 Sea urchin EST Lib1 Strongylocentrotu... 46 4.0 1
(CX679420) ydc44g05.y2 Sea urchin EST Lib1 Strongylocentrotu... 46 4.0 1
(CX678119) ydc23g09.y2 Sea urchin EST Lib1 Strongylocentrotu... 46 4.0 1
(CX678068) ydc23b04.y2 Sea urchin EST Lib1 Strongylocentrotu... 46 4.0 1
(CX678062) ydc23a06.y2 Sea urchin EST Lib1 Strongylocentrotu... 46 4.0 1
(CX199513) yda47d04.y2 Sea urchin EST Lib1 Strongylocentrotu... 46 4.0 1
(BQ051067) AGENCOURT_6941131 NIH_MGC_71 Homo sapiens cDNA cl... 40 6.5 2
(AF482380) Dictyostelium discoideum ABC transporter AbcG1 (a... 30 7.6 5
(AC139600) Medicago truncatula chromosome 6 clone mth2-20m4,... 40 8.3 5

>(J04065) D.discoideum beta-N-acetylhexosaminidase (nagA) mRNA,
complete cds.
Length = 1646

Score = 1635 bits (825), Expect = 0.0
Identities = 825/825 (100%)
Strand = Plus / Plus


Query: 615 cctgaattcgatataccaggccatgctgctgcttggggaattggttatccagaattggtt 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 cctgaattcgatataccaggccatgctgctgcttggggaattggttatccagaattggtt 825


Query: 675 gcaacttgtccagattatgctgcaaatgttaacaatattccattagatatttcaaatcca 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 gcaacttgtccagattatgctgcaaatgttaacaatattccattagatatttcaaatcca 885


Query: 735 gctacctttacattcattcaaaatcttttcactgaaattgcaccattattcattgataat 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 gctacctttacattcattcaaaatcttttcactgaaattgcaccattattcattgataat 945


Query: 795 tatttccatactggtggtgatgaattagttactggttgttggcttgaagatccagcaatt 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 tatttccatactggtggtgatgaattagttactggttgttggcttgaagatccagcaatt 1005


Query: 855 gcaaattggatgacaaaaatgggtttctcaactactgatgctttccaatattttgaaaat 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 gcaaattggatgacaaaaatgggtttctcaactactgatgctttccaatattttgaaaat 1065


Query: 915 aatttggatgttactatgaaatcaattaatcgtactaaaattacatggaatgatccaatt 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1066 aatttggatgttactatgaaatcaattaatcgtactaaaattacatggaatgatccaatt 1125


Query: 975 gattatggtgttcaattaaatccagaaacattagttcaagtttggagtagtggttcagat 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1126 gattatggtgttcaattaaatccagaaacattagttcaagtttggagtagtggttcagat 1185


Query: 1035 ttacaaggaattgtaaatagtggttataaagcacttgtatcatttgcatggtatttagat 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1186 ttacaaggaattgtaaatagtggttataaagcacttgtatcatttgcatggtatttagat 1245


Query: 1095 aaacaaaatccagataataacattcattatgaatggcaagatacttggcaagatttttat 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1246 aaacaaaatccagataataacattcattatgaatggcaagatacttggcaagatttttat 1305


Query: 1155 gctgctgatccaacaaataatatctctacaaacgctgaaaatattattggtggtgaagca 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1306 gctgctgatccaacaaataatatctctacaaacgctgaaaatattattggtggtgaagca 1365


Query: 1215 acaatgtgggctgaacaaattaatcaagtaaattgggatgttagagtttggccaagagca 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1366 acaatgtgggctgaacaaattaatcaagtaaattgggatgttagagtttggccaagagca 1425


Query: 1275 atcggtatcgctgaaagattatggtctgctcaaagtgttaactctgtctctttagcactc 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1426 atcggtatcgctgaaagattatggtctgctcaaagtgttaactctgtctctttagcactc 1485


Query: 1335 ccacgtattggtcattttacttgtgatctctcacgtcgtggtattcaatctggtccatta 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1486 ccacgtattggtcattttacttgtgatctctcacgtcgtggtattcaatctggtccatta 1545


Query: 1395 ttcccagactattgtccaatgcaagatgatttggttttcactatg 1439
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1546 ttcccagactattgtccaatgcaagatgatttggttttcactatg 1590

Score = 1197 bits (604), Expect = 0.0
Identities = 604/604 (100%)
Strand = Plus / Plus


Query: 1 gatcaaaaagattatattattttttgcagttttaattgcaattgtaattggtcaacaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 gatcaaaaagattatattattttttgcagttttaattgcaattgtaattggtcaacaacc 107


Query: 61 attgaatgttgtaccatatcctcaacaagtttctattggtacttgtgtcatcccagttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 attgaatgttgtaccatatcctcaacaagtttctattggtacttgtgtcatcccagttgc 167


Query: 121 accaggatcaattcttattgaatcaaatattgaatcagcaacatttagtgtttcaatgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 accaggatcaattcttattgaatcaaatattgaatcagcaacatttagtgtttcaatgga 227


Query: 181 tagatataccaatttattcttcccatttagtaatgaaagtgagccatcatcaaatgaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 tagatataccaatttattcttcccatttagtaatgaaagtgagccatcatcaaatgaaag 287


Query: 241 ttttttactttcagttacaatctatagtgatgatgaaactcttcaattaggaattgatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ttttttactttcagttacaatctatagtgatgatgaaactcttcaattaggaattgatga 347


Query: 301 aagttattcattaagcattgaacaaggttcctaccaattgaaagcaaccaacatctatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aagttattcattaagcattgaacaaggttcctaccaattgaaagcaaccaacatctatgg 407


Query: 361 tgcaatgagaggtttggaaactttcaaacaattgatcgtctataatgaattggaaaatag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tgcaatgagaggtttggaaactttcaaacaattgatcgtctataatgaattggaaaatag 467


Query: 421 ttattcaattgtatgcgtatcaattagtgattcaccaagatatccatggagaggtttcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ttattcaattgtatgcgtatcaattagtgattcaccaagatatccatggagaggtttcat 527


Query: 481 ggttgattcggcccgtcattacatcccaaagaatatgatacttcatatgatcgattcatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ggttgattcggcccgtcattacatcccaaagaatatgatacttcatatgatcgattcatt 587


Query: 541 agggttcagtaaattcaatacattacattggcatatggttgatgctgttgcattcccagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 agggttcagtaaattcaatacattacattggcatatggttgatgctgttgcattcccagt 647


Query: 601 tgaa 604
||||
Sbjct: 648 tgaa 651

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,638,122,532
Number of extensions: 94432907
Number of successful extensions: 7354952
Number of sequences better than 10.0: 67
Length of query: 1562
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1538
Effective length of database: 97,308,875,965
Effective search space: 149661051234170
Effective search space used: 149661051234170
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 2
Homology vs Protein
Query= Contig-U12183-1 (Contig-U12183-1Q) /CSM_Contig/Contig-U12183-1Q.Seq.d
(1562 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(P13723) RecName: Full=Beta-hexosaminidase subunit A1; ... 596 0.0
(Q54SC9) RecName: Full=Beta-hexosaminidase subunit A2; ... 391 e-168
BC093192_1(BC093192|pid:none) Danio rerio zgc:112084, mRNA (cDNA... 184 2e-69
AY629244_1(AY629244|pid:none) Oryctolagus cuniculus beta-hexosam... 177 1e-68
AK159091_1(AK159091|pid:none) Mus musculus osteoclast-like cell ... 180 1e-65
(P07686) RecName: Full=Beta-hexosaminidase subunit beta; ... 167 3e-65
M19735_1(M19735|pid:none) Homo sapiens beta-hexosaminidase beta ... 167 3e-65
EF676594_1(EF676594|pid:none) Picea sitchensis clone WS02743_M24... 159 2e-64
BC161740_1(BC161740|pid:none) Xenopus tropicalis hypothetical pr... 172 1e-63
AM493720_1(AM493720|pid:none) Arabidopsis thaliana mRNA for beta... 150 8e-63
AC078977_6(AC078977|pid:none) Oryza sativa (japonica cultivar-gr... 156 1e-62
AY128283_1(AY128283|pid:none) Arabidopsis thaliana At1g65600/F5I... 160 2e-62
AB286958_1(AB286958|pid:none) Bombyx mori BmGlcNAcase2 mRNA for ... 178 3e-62
AP003407_2(AP003407|pid:none) Oryza sativa Japonica Group genomi... 149 9e-62
EU955869_1(EU955869|pid:none) Zea mays clone 1549801 beta-hexosa... 152 3e-61
AY601817_1(AY601817|pid:none) Bombyx mori beta-N-acetylglucosami... 172 1e-59
(Q54K55) RecName: Full=Beta-hexosaminidase subunit B1; ... 136 3e-58
DQ183187_1(DQ183187|pid:none) Spodoptera frugiperda beta-N-acety... 164 2e-57
DQ249308_1(DQ249308|pid:none) Spodoptera frugiperda beta-N-acety... 164 2e-57
EF469203_1(EF469203|pid:none) Ostrinia furnacalis beta-hexosamin... 160 5e-56
CP000473_6475(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 153 7e-56
(P49009) RecName: Full=Beta-hexosaminidase subunit alpha; ... 155 3e-55
U09735_1(U09735|pid:none) Entamoeba histolytica HM1:IMSS beta-N-... 155 3e-55
AY601818_1(AY601818|pid:none) Bombyx mori beta-N-acetylglucosami... 144 4e-51
AP003758_21(AP003758|pid:none) Oryza sativa Japonica Group genom... 138 5e-51
CP001472_29(CP001472|pid:none) Acidobacterium capsulatum ATCC 51... 137 6e-51
EU953304_1(EU953304|pid:none) Zea mays clone 1397740 beta-hexosa... 128 1e-47
BT042330_1(BT042330|pid:none) Zea mays full-length cDNA clone ZM... 135 5e-47
CP000360_2731(CP000360|pid:none) Acidobacteria bacterium Ellin34... 125 1e-46
BT055716_1(BT055716|pid:none) Zea mays full-length cDNA clone ZM... 135 2e-46
DQ000319_1(DQ000319|pid:none) Metarhizium anisopliae N-acetylglu... 116 1e-44
CP000685_4517(CP000685|pid:none) Flavobacterium johnsoniae UW101... 119 2e-44
DQ232847_1(DQ232847|pid:none) Coccidioides posadasii chitobiase ... 122 2e-44
CR382138_817(CR382138|pid:none) Debaryomyces hansenii strain CBS... 114 2e-44
CP000499_230(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 120 4e-44
AY643499_1(AY643499|pid:none) Homo sapiens ENC-1AS mRNA, complet... 167 6e-44
CP001032_1001(CP001032|pid:none) Opitutus terrae PB90-1, complet... 115 8e-44
AF056977_2(AF056977|pid:none) Penicillium chrysogenum hypothetic... 112 8e-44
CP000009_559(CP000009|pid:none) Gluconobacter oxydans 621H, comp... 133 1e-43
AK075895_1(AK075895|pid:none) Mus musculus adult male tongue cDN... 180 1e-43
AK151960_1(AK151960|pid:none) Mus musculus bone marrow macrophag... 180 1e-43
(P29416) RecName: Full=Beta-hexosaminidase subunit alpha; ... 180 1e-43
AK168186_1(AK168186|pid:none) Mus musculus TIB-55 BB88 cDNA, RIK... 180 1e-43
AK159890_1(AK159890|pid:none) Mus musculus osteoclast-like cell ... 180 1e-43
(Q6AXR4) RecName: Full=Beta-hexosaminidase subunit beta; ... 180 1e-43
AB039846_1(AB039846|pid:none) Emericella nidulans nagA gene for ... 118 2e-43
BT042908_1(BT042908|pid:none) Zea mays full-length cDNA clone ZM... 179 2e-43
(Q641X3) RecName: Full=Beta-hexosaminidase subunit alpha; ... 179 2e-43
AB170139_1(AB170139|pid:none) Macaca fascicularis brain cDNA clo... 179 3e-43
M13520_1(M13520|pid:none) Human alpha-polypeptide of N-acetyl-al... 177 9e-43
CR627386_1(CR627386|pid:none) Homo sapiens mRNA; cDNA DKFZp781C1... 177 9e-43
AK301000_1(AK301000|pid:none) Homo sapiens cDNA FLJ53927 complet... 177 9e-43
FM992692_331(FM992692|pid:none) Candida dubliniensis CD36 chromo... 99 1e-42
(Q5RC84) RecName: Full=Beta-hexosaminidase subunit alpha; ... 177 1e-42
CR378667_37(CR378667|pid:none) Photobacterium profundum SS9; seg... 100 2e-42
(Q0V8R6) RecName: Full=Beta-hexosaminidase subunit alpha; ... 176 2e-42
AK080777_1(AK080777|pid:none) Mus musculus 9.5 days embryo parth... 176 2e-42
AM270194_48(AM270194|pid:none) Aspergillus niger contig An09c005... 110 3e-42
EU579459_1(EU579459|pid:none) Ovis aries hexosaminidase A alpha ... 175 5e-42
BX571730_2(BX571730|pid:none) Zebrafish DNA sequence from clone ... 175 5e-42
AY291332_1(AY291332|pid:none) Blomia tropicalis Blo t hexosamini... 174 1e-41
A55588(A55588)mannosyl-glycoprotein endo-beta-N-acetylglucosamin... 99 5e-41
EU442572_1(EU442572|pid:none) Sus scrofa hexosaminidase A alpha ... 169 3e-40
AB085840_1(AB085840|pid:none) Aspergillus oryzae nagA gene for b... 105 5e-40
BT045004_1(BT045004|pid:none) Salmo salar clone ssal-rgf-509-263... 167 1e-39
S70340_1(S70340|pid:none) HEXB=beta-hexosaminidase beta subunit ... 166 3e-39
(P49614) RecName: Full=Beta-hexosaminidase subunit beta; ... 166 3e-39
AY815178_1(AY815178|pid:none) Schistosoma japonicum SJCHGC06873 ... 165 5e-39
CP001189_1374(CP001189|pid:none) Gluconacetobacter diazotrophicu... 117 4e-38
FJ848784_1(FJ848784|pid:none) Xestia c-nigrum beta-N-acetylgluco... 93 4e-38
EU158179_1(EU158179|pid:none) Ostrinia furnacalis hexosaminidase... 100 8e-38
FN357433_16(FN357433|pid:none) Schistosoma mansoni genome sequen... 159 2e-37
DQ280379_1(DQ280379|pid:none) Fenneropenaeus chinensis beta-N-ac... 97 2e-37
AY118626_1(AY118626|pid:none) Drosophila melanogaster RE27784 fu... 91 4e-37
AF014805_1(AF014805|pid:none) Felis catus beta-N-acetylhexosamin... 158 6e-37
AE014296_866(AE014296|pid:none) Drosophila melanogaster chromoso... 91 7e-37
AE014296_868(AE014296|pid:none) Drosophila melanogaster chromoso... 91 7e-37
EF592537_1(EF592537|pid:none) Tribolium castaneum beta-N-acetylg... 93 2e-36
CP000961_3897(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 91 4e-36
DQ364461_1(DQ364461|pid:none) Trichoderma atroviride N-acetyl-be... 97 9e-36
AB286957_1(AB286957|pid:none) Bombyx mori BmGlcNAcase1 mRNA for ... 97 2e-35
S80070_1(S80070|pid:none) exc2=exochitinase [Trichoderma harzian... 98 3e-35
AL132954_14(AL132954|pid:none) Arabidopsis thaliana DNA chromoso... 150 2e-34
(Q54K56) RecName: Full=Beta-hexosaminidase subunit B2; ... 145 3e-33
(Q619W7) RecName: Full=Beta-hexosaminidase A; EC=3.2.1.... 139 2e-31
CP000790_1605(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 84 3e-31
BC134040_1(BC134040|pid:none) Danio rerio hexosaminidase A (alph... 108 4e-22
DQ868943_1(DQ868943|pid:none) Hypocrea virens N-acetylglucosamin... 108 7e-22
AF395761_1(AF395761|pid:none) Hypocrea virens chitobiase precurs... 108 7e-22
AY612745_1(AY612745|pid:none) Trichoderma atroviride N-acetyl-be... 107 2e-21
AF419158_1(AF419158|pid:none) Paracoccidioides brasiliensis N-ac... 71 2e-21
AE015928_4679(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 68 8e-20
AJ508396_1(AJ508396|pid:none) Tetrahymena thermophila macronucle... 100 2e-19
BT046572_1(BT046572|pid:none) Salmo salar clone ssal-rgb2-610-11... 99 3e-19
DQ887769_1(DQ887769|pid:none) Ostrinia furnacalis N-acetylglucos... 99 6e-19
DQ005717_1(DQ005717|pid:none) Choristoneura fumiferana beta-N-ac... 98 7e-19
CP000653_440(CP000653|pid:none) Enterobacter sp. 638, complete g... 95 6e-18
EF592539_1(EF592539|pid:none) Tribolium castaneum beta-N-acetylg... 95 8e-18
AL591985_837(AL591985|pid:none) Sinorhizobium meliloti 1021 plas... 94 1e-17
CP000739_1061(CP000739|pid:none) Sinorhizobium medicae WSM419 pl... 94 2e-17
AY368703_1(AY368703|pid:none) Manduca sexta N-acetylglucosaminid... 93 2e-17
AC2895(AC2895) beta-N-acetylhexosaminidase [imported] - Agrobact... 93 3e-17
EF592536_1(EF592536|pid:none) Tribolium castaneum beta-N-acetylg... 93 3e-17
AP009179_984(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic D... 92 4e-17
CP000826_534(CP000826|pid:none) Serratia proteamaculans 568, com... 92 7e-17
BA000038_1141(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, ch... 89 3e-16
JC7821(JC7821)beta-N-acetylhexosaminidase (EC 3.2.1.52) - Altero... 89 3e-16
AB067646_1(AB067646|pid:none) Pseudoalteromonas piscicida hex86 ... 89 3e-16
CR626927_2106(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 55 3e-16
AY113418_1(AY113418|pid:none) Drosophila melanogaster RE17456 fu... 89 4e-16
AE015928_3596(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 88 8e-16
AE013598_1758(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 87 1e-15
CP000140_646(CP000140|pid:none) Parabacteroides distasonis ATCC ... 87 2e-15
AY061037_1(AY061037|pid:none) Drosophila melanogaster HL07462 fu... 87 2e-15
AP008229_1684(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M... 87 2e-15
CP000967_3086(CP000967|pid:none) Xanthomonas oryzae pv. oryzae P... 87 2e-15
AE009442_1752(AE009442|pid:none) Xylella fastidiosa Temecula1, c... 87 2e-15
CP000634_1020(CP000634|pid:none) Agrobacterium vitis S4 chromoso... 86 4e-15
CP001074_3909(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 86 5e-15
CP001139_2173(CP001139|pid:none) Vibrio fischeri MJ11 chromosome... 85 6e-15
AE005673_446(AE005673|pid:none) Caulobacter crescentus CB15, com... 85 6e-15
AM236080_4224(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 85 8e-15
AP006841_381(AP006841|pid:none) Bacteroides fragilis YCH46 DNA, ... 85 8e-15
AE014298_1272(AE014298|pid:none) Drosophila melanogaster chromos... 85 8e-15
CP000282_3029(CP000282|pid:none) Saccharophagus degradans 2-40, ... 84 1e-14
DQ463744_1(DQ463744|pid:none) Uncultured bacterium beta-N-acetyl... 84 1e-14
CP000020_2174(CP000020|pid:none) Vibrio fischeri ES114 chromosom... 84 2e-14
AB102772_9(AB102772|pid:none) Bacteroides fragilis gene cluster ... 83 2e-14
CP000377_2738(CP000377|pid:none) Silicibacter sp. TM1040, comple... 83 3e-14
CR626927_321(CR626927|pid:none) Bacteroides fragilis NCTC 9343, ... 83 3e-14
CP001614_713(CP001614|pid:none) Teredinibacter turnerae T7901, c... 82 4e-14
CP000685_2032(CP000685|pid:none) Flavobacterium johnsoniae UW101... 82 4e-14
AE016795_1538(AE016795|pid:none) Vibrio vulnificus CMCP6 chromos... 81 9e-14
CP000050_1194(CP000050|pid:none) Xanthomonas campestris pv. camp... 81 9e-14
BA000037_2741(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 80 2e-13
CR626927_1731(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 80 3e-13
AY810967_1(AY810967|pid:none) Schistosoma japonicum SJCHGC04173 ... 80 3e-13
AB355991_4(AB355991|pid:none) Aeromonas hydrophila strain SUWA-9... 79 3e-13
CR378664_154(CR378664|pid:none) Photobacterium profundum SS9; se... 79 3e-13
CP000139_4008(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 79 5e-13
AM920689_1284(AM920689|pid:none) Xanthomonas campestris pv. camp... 79 6e-13
BA000031_2486(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22... 78 8e-13
AE015928_506(AE015928|pid:none) Bacteroides thetaiotaomicron VPI... 78 1e-12
BA000030_3400(BA000030|pid:none) Streptomyces avermitilis MA-468... 53 1e-12
FM954973_39(FM954973|pid:none) Vibrio splendidus LGP32 chromosom... 77 1e-12
CP000644_2884(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 77 2e-12
AE015928_1621(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 76 3e-12
AY184490_4(AY184490|pid:none) Tannerella forsythensis hypothetic... 76 3e-12
U24658_1(U24658|pid:none) Vibrio parahaemolyticus beta-N-hexosam... 76 3e-12
EU281545_1(EU281545|pid:none) Bifidobacterium bifidum JCM 1254 l... 76 3e-12
AP009380_39(AP009380|pid:none) Porphyromonas gingivalis ATCC 332... 75 7e-12
CP000927_292(CP000927|pid:none) Caulobacter sp. K31, complete ge... 75 7e-12
AE015928_4392(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 75 7e-12
(P49008) RecName: Full=Beta-hexosaminidase; EC=3.2.1.52... 75 7e-12
AP006841_3241(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 75 9e-12
CR626927_2999(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 74 1e-11
CR626927_914(CR626927|pid:none) Bacteroides fragilis NCTC 9343, ... 74 1e-11
AE015928_2459(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 74 2e-11
AE015928_1627(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 74 2e-11
CP000474_886(CP000474|pid:none) Arthrobacter aurescens TC1, comp... 74 2e-11
FM954972_2388(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 73 3e-11
AP009493_4591(AP009493|pid:none) Streptomyces griseus subsp. gri... 72 4e-11
AM743169_3804(AM743169|pid:none) Stenotrophomonas maltophilia K2... 72 4e-11
CP000685_671(CP000685|pid:none) Flavobacterium johnsoniae UW101,... 72 4e-11
AL939105_229(AL939105|pid:none) Streptomyces coelicolor A3(2) co... 72 4e-11
AP009493_1319(AP009493|pid:none) Streptomyces griseus subsp. gri... 72 4e-11
CP000139_517(CP000139|pid:none) Bacteroides vulgatus ATCC 8482, ... 72 6e-11
CP001071_1981(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 72 6e-11
CP000140_2446(CP000140|pid:none) Parabacteroides distasonis ATCC... 71 1e-10
AJ250587_1(AJ250587|pid:none) Arthrobacter sp. chb gene for chit... 71 1e-10
AE016795_233(AE016795|pid:none) Vibrio vulnificus CMCP6 chromoso... 71 1e-10
EF011627_5(EF011627|pid:none) Stenotrophomonas maltophilia aconi... 71 1e-10
AK296528_1(AK296528|pid:none) Homo sapiens cDNA FLJ60630 complet... 70 2e-10
AL939121_207(AL939121|pid:none) Streptomyces coelicolor A3(2) co... 46 2e-10
AP006841_3251(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 70 3e-10
X78979_1(X78979|pid:none) P.gingivalis nahA gene. 70 3e-10
CR626927_3009(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 70 3e-10
BX294140_255(BX294140|pid:none) Rhodopirellula baltica SH 1 comp... 56 4e-10
AP006841_3244(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 69 4e-10
CP000139_2140(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 69 5e-10
CP001056_1374(CP001056|pid:none) Clostridium botulinum B str. Ek... 69 5e-10
(P13670) RecName: Full=N,N'-diacetylchitobiase; Short=C... 69 6e-10
AX113753_1(AX113753|pid:none) Sequence 18 from Patent WO0127322. 69 6e-10
BA000031_755(BA000031|pid:none) Vibrio parahaemolyticus RIMD 221... 69 6e-10
CP000789_1182(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 69 6e-10
AE016822_1488(AE016822|pid:none) Leifsonia xyli subsp. xyli str.... 68 8e-10
CP001071_1982(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 68 8e-10
CP001618_1286(CP001618|pid:none) Beutenbergia cavernae DSM 12333... 68 1e-09
CP001071_1640(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 68 1e-09
AF242587_1(AF242587|pid:none) Cellulomonas sp. GM13 beta N-acety... 67 1e-09
CR626927_3002(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 67 1e-09
AE015928_4335(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 67 2e-09
CR626927_3511(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 67 2e-09
CP000891_1171(CP000891|pid:none) Shewanella baltica OS195, compl... 67 2e-09
CP000139_85(CP000139|pid:none) Bacteroides vulgatus ATCC 8482, c... 66 3e-09
CP001252_3154(CP001252|pid:none) Shewanella baltica OS223, compl... 66 3e-09
CP001618_942(CP001618|pid:none) Beutenbergia cavernae DSM 12333,... 66 4e-09
BA000030_5141(BA000030|pid:none) Streptomyces avermitilis MA-468... 66 4e-09
AE015928_1051(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 66 4e-09
CP000139_3144(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 65 5e-09
CR626927_1729(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 65 9e-09
CP000021_1017(CP000021|pid:none) Vibrio fischeri ES114 chromosom... 64 1e-08
CP001071_361(CP001071|pid:none) Akkermansia muciniphila ATCC BAA... 64 1e-08
CP001133_1119(CP001133|pid:none) Vibrio fischeri MJ11 chromosome... 64 1e-08
FM954972_681(FM954972|pid:none) Vibrio splendidus LGP32 chromoso... 64 2e-08
AF072375_1(AF072375|pid:none) Pseudoalteromonas sp. S9 beta-hexo... 64 2e-08
CP000481_72(CP000481|pid:none) Acidothermus cellulolyticus 11B s... 63 3e-08
FM178380_50(FM178380|pid:none) Aliivibrio salmonicida LFI1238 ch... 63 3e-08
CP001071_1011(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 63 3e-08
CP000503_3052(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 63 3e-08
CP001071_2109(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 63 3e-08
CP000681_1067(CP000681|pid:none) Shewanella putrefaciens CN-32, ... 63 3e-08
AE014299_3413(AE014299|pid:none) Shewanella oneidensis MR-1, com... 62 4e-08
AB110077_3(AB110077|pid:none) Streptomyces thermoviolaceus genes... 62 4e-08
CP000469_3094(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 62 4e-08
AY846748_1(AY846748|pid:none) Prevotella sp. RS2 mucin-desulfati... 62 6e-08
CP000850_3664(CP000850|pid:none) Salinispora arenicola CNS-205, ... 61 1e-07
CP000446_2925(CP000446|pid:none) Shewanella sp. MR-4, complete g... 61 1e-07
U40488_1(U40488|pid:none) Streptomyces sp. lacto-N-biosidase pre... 61 1e-07
CP000961_556(CP000961|pid:none) Shewanella woodyi ATCC 51908, co... 60 2e-07
CP000961_1302(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 60 2e-07
CP000821_1209(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 60 2e-07
CP000667_3376(CP000667|pid:none) Salinispora tropica CNB-440, co... 60 2e-07
AB031320_1(AB031320|pid:none) Aeromonas sp. 10S-24 gene for beta... 60 3e-07
CP000472_3540(CP000472|pid:none) Shewanella piezotolerans WP3, c... 60 3e-07
JC7537(JC7537;PC7108)beta-N-acetylglucosaminidase - Alteromonas ... 60 3e-07
AB042622_1(AB042622|pid:none) Pseudoalteromonas piscicida nagA g... 60 3e-07
CP000140_2860(CP000140|pid:none) Parabacteroides distasonis ATCC... 59 4e-07
(Q7WUL4) RecName: Full=Beta-N-acetylhexosaminidase; EC=... 59 4e-07
CP000444_2996(CP000444|pid:none) Shewanella sp. MR-7, complete g... 59 5e-07
S77837_1(S77837|pid:none) Penicillium chrysogenum 68 kDa allerge... 59 6e-07
CP000934_287(CP000934|pid:none) Cellvibrio japonicus Ueda107, co... 59 6e-07
(Q54468) RecName: Full=Chitobiase; EC=3.2.1.52; AltName... 58 1e-06
BA000030_5275(BA000030|pid:none) Streptomyces avermitilis MA-468... 57 2e-06
AB070936_1(AB070936|pid:none) Streptomyces avermitilis sideropho... 57 2e-06
(P49007) RecName: Full=Beta-hexosaminidase B; EC=3.2.1.... 57 2e-06
CP000139_4010(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 57 2e-06
CR378666_91(CR378666|pid:none) Photobacterium profundum SS9; seg... 56 3e-06
CP001071_1786(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 56 4e-06
AE017283_1781(AE017283|pid:none) Propionibacterium acnes KPA1712... 56 4e-06
CP000606_1113(CP000606|pid:none) Shewanella loihica PV-4, comple... 56 4e-06
BX571863_114(BX571863|pid:none) Photorhabdus luminescens subsp. ... 55 9e-06
AF063001_1(AF063001|pid:none) Streptomyces plicatus B-N-acetylhe... 55 9e-06
CP001193_59(CP001193|pid:none) Rhizobium leguminosarum bv. trifo... 55 9e-06
CP000753_1373(CP000753|pid:none) Shewanella baltica OS185, compl... 54 1e-05
CP000937_34(CP000937|pid:none) Francisella philomiragia subsp. p... 54 2e-05
CP000282_3261(CP000282|pid:none) Saccharophagus degradans 2-40, ... 54 2e-05
AB015350_1(AB015350|pid:none) Streptomyces thermoviolaceus nagB ... 54 2e-05
CP000851_1098(CP000851|pid:none) Shewanella pealeana ATCC 700345... 54 2e-05
DQ463745_3(DQ463745|pid:none) Proteobacterium AI21 GlcNAc-6P dea... 52 5e-05
CP000305_1116(CP000305|pid:none) Yersinia pestis Nepal516, compl... 52 6e-05
BX936398_1123(BX936398|pid:none) Yersinia pseudotuberculosis IP3... 52 6e-05
AB022786_1(AB022786|pid:none) Enterobacter sp. G-1 nag1 gene for... 52 6e-05
CP000137_391(CP000137|pid:none) Rhizobium etli CFN 42 plasmid p4... 52 6e-05
CP000812_1829(CP000812|pid:none) Thermotoga lettingae TMO, compl... 37 7e-05
AB102772_3(AB102772|pid:none) Bacteroides fragilis gene cluster ... 52 8e-05
CP000139_4014(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 51 1e-04
(Q04786) RecName: Full=Beta-hexosaminidase; EC=3.2.1.52... 51 1e-04
AM236085_522(AM236085|pid:none) Rhizobium leguminosarum bv. vici... 51 1e-04
AF283265_1(AF283265|pid:none) Anopheles gambiae beta-hexosaminid... 50 2e-04
AM420293_3767(AM420293|pid:none) Saccharopolyspora erythraea NRR... 50 2e-04
AF395815_1(AF395815|pid:none) Paracoccidioides brasiliensis N-ac... 50 3e-04
AE016825_1493(AE016825|pid:none) Chromobacterium violaceum ATCC ... 50 3e-04
CP000783_2586(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 49 4e-04
DQ845102_1(DQ845102|pid:none) Trichoplusia ni beta-N-acetylgluco... 49 4e-04
CP000644_2637(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 49 4e-04
AY162276_1(AY162276|pid:none) Chromobacterium violaceum chitinas... 48 9e-04
EU966800_1(EU966800|pid:none) Zea mays clone 297489 hypothetical... 47 0.002
DQ658742_1(DQ658742|pid:none) Uncultured bacterium clone pFCH33 ... 47 0.002
CP000644_2625(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 46 0.003
CP000570_538(CP000570|pid:none) Burkholderia pseudomallei 668 ch... 46 0.004
CP001071_2098(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 46 0.004
BX571965_506(BX571965|pid:none) Burkholderia pseudomallei strain... 46 0.004
CP000526_138(CP000526|pid:none) Burkholderia mallei SAVP1 chromo... 46 0.004
AE015928_3866(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 46 0.004
AB026053_1(AB026053|pid:none) Pseudoalteromonas piscicida hex99 ... 45 0.006
CP001600_2802(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 45 0.007
AJ833914_1(AJ833914|pid:none) Aeromonas punctata nagA1 gene for ... 44 0.016
AM920437_2480(AM920437|pid:none) Penicillium chrysogenum Wiscons... 44 0.021
AY618481_1(AY618481|pid:none) Actinobacillus pleuropneumoniae di... 43 0.028
CP000875_1173(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 43 0.028
AY228551_1(AY228551|pid:none) Actinobacillus actinomycetemcomita... 42 0.047
EU088116_1(EU088116|pid:none) Mycoplasma alligatoris strain A21J... 42 0.081
BA000016_981(BA000016|pid:none) Clostridium perfringens str. 13 ... 42 0.081
CP000246_1209(CP000246|pid:none) Clostridium perfringens ATCC 13... 41 0.11
CP000804_510(CP000804|pid:none) Roseiflexus castenholzii DSM 139... 41 0.11
CP000440_2870(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 41 0.14
BA000016_1364(BA000016|pid:none) Clostridium perfringens str. 13... 41 0.14
AB053088_1(AB053088|pid:none) Burkholderia cepacia bcc1 gene for... 40 0.18
CP001095_2277(CP001095|pid:none) Bifidobacterium longum subsp. i... 40 0.18
CP000312_1022(CP000312|pid:none) Clostridium perfringens SM101, ... 40 0.24
CP000378_2191(CP000378|pid:none) Burkholderia cenocepacia AU 105... 40 0.24
AM747720_785(AM747720|pid:none) Burkholderia cenocepacia J2315 c... 40 0.24
U85620_1(U85620|pid:none) Tritrichomonas foetus beta-hexosaminid... 40 0.31
CP000686_3528(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 40 0.31
CP000771_479(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 39 0.40
CP000614_2887(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 39 0.40
AP007164_279(AP007164|pid:none) Aspergillus oryzae RIB40 genomic... 39 0.40
CP001618_3021(CP001618|pid:none) Beutenbergia cavernae DSM 12333... 38 1.2
CP001185_1450(CP001185|pid:none) Thermosipho africanus TCF52B, c... 37 1.5
CP000910_3353(CP000910|pid:none) Renibacterium salmoninarum ATCC... 37 2.0
CP000139_1156(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 37 2.6
CP001251_210(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, ... 37 2.6
CP000910_3354(CP000910|pid:none) Renibacterium salmoninarum ATCC... 36 3.4
AC105773_10(AC105773|pid:none) Oryza sativa (japonica cultivar-g... 36 4.4
CU633447_67(CU633447|pid:none) Podospora anserina genomic DNA ch... 35 5.8
CP000750_3704(CP000750|pid:none) Kineococcus radiotolerans SRS30... 35 9.9
AM430887_3(AM430887|pid:none) Vitis vinifera contig VV78X106434.... 35 9.9
CP000514_2802(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 35 9.9

>(P13723) RecName: Full=Beta-hexosaminidase subunit A1;
EC=3.2.1.52; AltName: Full=N-acetyl-beta-glucosaminidase
subunit A1; AltName: Full=Beta-N-acetylhexosaminidase
subunit A1; Flags: Precursor; &A30766(A30766;A31778)
&J04065_1(J04065|pid:none)
Length = 532

Score = 596 bits (1536), Expect(2) = 0.0
Identities = 279/279 (100%), Positives = 279/279 (100%)
Frame = +3

Query: 615 PEFDIPGHAAAWGIGYPELVATCPDYAANVNNIPLDISNPATFTFIQNLFTEIAPLFIDN 794
PEFDIPGHAAAWGIGYPELVATCPDYAANVNNIPLDISNPATFTFIQNLFTEIAPLFIDN
Sbjct: 241 PEFDIPGHAAAWGIGYPELVATCPDYAANVNNIPLDISNPATFTFIQNLFTEIAPLFIDN 300

Query: 795 YFHTGGDELVTGCWLEDPAIANWMTKMGFSTTDAFQYFENNLDVTMKSINRTKITWNDPI 974
YFHTGGDELVTGCWLEDPAIANWMTKMGFSTTDAFQYFENNLDVTMKSINRTKITWNDPI
Sbjct: 301 YFHTGGDELVTGCWLEDPAIANWMTKMGFSTTDAFQYFENNLDVTMKSINRTKITWNDPI 360

Query: 975 DYGVQLNPETLVQVWSSGSDLQGIVNSGYKALVSFAWYLDKQNPDNNIHYEWQDTWQDFY 1154
DYGVQLNPETLVQVWSSGSDLQGIVNSGYKALVSFAWYLDKQNPDNNIHYEWQDTWQDFY
Sbjct: 361 DYGVQLNPETLVQVWSSGSDLQGIVNSGYKALVSFAWYLDKQNPDNNIHYEWQDTWQDFY 420

Query: 1155 AADPTNNISTNAENIIGGEATMWAEQINQVNWDVRVWPRAIGIAERLWSAQSVNSVSLAL 1334
AADPTNNISTNAENIIGGEATMWAEQINQVNWDVRVWPRAIGIAERLWSAQSVNSVSLAL
Sbjct: 421 AADPTNNISTNAENIIGGEATMWAEQINQVNWDVRVWPRAIGIAERLWSAQSVNSVSLAL 480

Query: 1335 PRIGHFTCDLSRRGIQSGPLFPDYCPMQDDLVFTMKPNT 1451
PRIGHFTCDLSRRGIQSGPLFPDYCPMQDDLVFTMKPNT
Sbjct: 481 PRIGHFTCDLSRRGIQSGPLFPDYCPMQDDLVFTMKPNT 519

Score = 354 bits (909), Expect(2) = 0.0
Identities = 181/201 (90%), Positives = 181/201 (90%)
Frame = +2

Query: 2 IKKIILFFAVLIAIVIGQQPLNVVPYPQQVSIGTCVIPVAPGSILIESNIESATFSVSMD 181
IKKIILFFAVLIAIVIGQQPLNVVPYPQQVSIGTCVIPVAPGSILIESNIESATFSVSMD
Sbjct: 2 IKKIILFFAVLIAIVIGQQPLNVVPYPQQVSIGTCVIPVAPGSILIESNIESATFSVSMD 61

Query: 182 RYTNXXXXXXXXXXXXXXXXXXXXVTIYSDDETLQLGIDESYSLSIEQGSYQLKATNIYG 361
RYTN VTIYSDDETLQLGIDESYSLSIEQGSYQLKATNIYG
Sbjct: 62 RYTNLFFPFSNESEPSSNESFLLSVTIYSDDETLQLGIDESYSLSIEQGSYQLKATNIYG 121

Query: 362 AMRGLETFKQLIVYNELENSYSIVCVSISDSPRYPWRGFMVDSARHYIPKNMILHMIDSL 541
AMRGLETFKQLIVYNELENSYSIVCVSISDSPRYPWRGFMVDSARHYIPKNMILHMIDSL
Sbjct: 122 AMRGLETFKQLIVYNELENSYSIVCVSISDSPRYPWRGFMVDSARHYIPKNMILHMIDSL 181

Query: 542 GFSKFNTLHWHMVDAVAFPVE 604
GFSKFNTLHWHMVDAVAFPVE
Sbjct: 182 GFSKFNTLHWHMVDAVAFPVE 202

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,523,051,184
Number of extensions: 50631761
Number of successful extensions: 132410
Number of sequences better than 10.0: 309
Number of HSP's gapped: 131789
Number of HSP's successfully gapped: 542
Length of query: 520
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 387
Effective length of database: 620,718,517
Effective search space: 240218066079
Effective search space used: 240218066079
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 1.00 gvh: 0.74 alm: 0.30 top: 0.20 tms: 0.07 mit: 0.28 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.01 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 1.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

36.0 %: extracellular, including cell wall
32.0 %: plasma membrane
20.0 %: endoplasmic reticulum
12.0 %: Golgi

>> prediction for Contig-U12183-1 is exc

VS (DIR, S) 4
VH (FL, L) 2
VF (FL, S) 5
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0