Contig-U12181-1
Contig ID Contig-U12181-1
Contig update 2002.12.18
Contig sequence
>Contig-U12181-1 (Contig-U12181-1Q) /CSM_Contig/Contig-U12181-1Q.Seq.d
ATTGAACAATTTGTAGAGGTACGTCCAACTGAAACTAGATTTAGACGTTT
AATAGAATTGCTATCGATTTGGTATCATAAAGGTCAGATTTTAATCTTTA
CCAATCGTCAAGAGACCACCGACAATCTATATCGTCAACTTTCAAACTCT
CAATATCAATGTCTATCATTACATGGTAGTAAAGATCAAACCGATCGTGA
TGAAACCATTAGTGACTTTAAAAATAAGGTTAAAACCATTTTAATCGCTA
CACCATTGGCATCACGTGGTTTGGATATCAAAGATTTAAATCTTGTGGTT
AATTTCGATTGCCCTGATCATTTGGAAGATTATGTTCATAGGGTAGGTAG
AACTGGTAGAGCAGGAAATCGTGGTACTGCTTATACATTTATCACACCCG
ACGAAGAGAGATTCTCTTCGTCAATCATTAAAGCTTTGGAACAATCTGGT
TCAAAAGTACCCGATGAACTTAGAAAATTGAATGATACCTACGAGAAAAA
GAGAAAAGAAGGTAAGGATGTACTATTGGCACCAACCGGTTTCACTGGTA
GAGGTCATAAATTTGATGCTGCCGAAGAGGATAAAAAGAATATTGAAAGA
AAACAACAAAGAAAAGCATATGGTATCGAAGAGGAAGAAGAAGAAGAGGA
TGAAGA----------CTGAAAAGGAGAAATTGGCCGCTGCTTCCGCTGA
AAAAGAAAAACAATTATTATCTGAAAAAGAAAAATTGGATCCTGCTACCA
CTAATACTATCGTCATACCTGGTGTAGATGGTACAATCATTACACCTTCT
TCATTACTTCAAACCGATCCTTCAGTTCCTGTGGGTCAACAGGCTATCAA
TCAAATATTTGGTATTTCACAAGTTACCTCCTCCGAAGAAGCAATTAAAA
AACTTCAATTGGCCGCTCAATTAGGTATGAAAGGTAATATTCAAAAATTA
AATAATCAAATAACTCCATTAAATCAAACTCATTTCATTGAAGAATTAGA
AATTAATGATTATTCTCAACAAGCTCGTTGGAAAGTTACTCATAAAGATG
CTTTACTTGAAATTACCAATTTTACAAATACTACAATTACAACAAAAGGT
ACATTCTTTCCACCAAATAAAATACCAGCTCCAGGTGAAAGAAAATTATA
TTTATATATTGAAGGTCCATCTGATGCATCTGTCAAAAATGCAAAATCTG
ATATTAAAAAGATTCTCGACGAAGTTCAATCAACTCATCAAAGTACTGGA
AAGTATTCTGTATTTTAATTTTATTTATTAC

Gap gap included
Contig length 1271
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 5754304
End point 5753032
Strand (PLUS/MINUS) MINUS
Number of clones 4
Number of EST 5
Link to clone list U12181
List of clone(s)

est1=SLI836F,1,279
est2=SLB286Z,145,657
est3=SLC582Z,221,657
est4=VHG511Z,658,1262
est5=SLI836Z,753,1273
Translated Amino Acid sequence
IEQFVEVRPTETRFRRLIELLSIWYHKGQILIFTNRQETTDNLYRQLSNSQYQCLSLHGS
KDQTDRDETISDFKNKVKTILIATPLASRGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGR
AGNRGTAYTFITPDEERFSSSIIKALEQSGSKVPDELRKLNDTYEKKRKEGKDVLLAPTG
FTGRGHKFDAAEEDKKNIERKQQRKAYGIEEEEEEEDE---

---EKEKLAAASAEKEKQLLSEKEKLDPATTNTIVIPGVDGTIITPSSLLQTDPSVPVGQ
QAINQIFGISQVTSSEEAIKKLQLAAQLGMKGNIQKLNNQITPLNQTHFIEELEINDYSQ
QARWKVTHKDALLEITNFTNTTITTKGTFFPPNKIPAPGERKLYLYIEGPSDASVKNAKS
DIKKILDEVQSTHQSTGKYSVF*fyll


Translated Amino Acid sequence (All Frames)
Frame A:
IEQFVEVRPTETRFRRLIELLSIWYHKGQILIFTNRQETTDNLYRQLSNSQYQCLSLHGS
KDQTDRDETISDFKNKVKTILIATPLASRGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGR
AGNRGTAYTFITPDEERFSSSIIKALEQSGSKVPDELRKLNDTYEKKRKEGKDVLLAPTG
FTGRGHKFDAAEEDKKNIERKQQRKAYGIEEEEEEEDE---

---lkrrnwpllplkkknnyylkkknwillplilssylv*mvqslhllhyfkpilqflwv
nrlsikylvfhklpppkkqlknfnwpln*v*kvifkn*iik*lh*iklislkn*klmiil
nklvgkllikmlylklpilqilqlqqkvhsfhqikyqlqvkenyiyilkvhlmhlskmqn
lilkrfstkfnqlikvlesilyfnfiyy

Frame B:
lnnl*ryvqlkldldv**ncyrfgiikvrf*slpivkrpptiyivnfqtlninvyhymvv
kikpivmkplvtlkirlkpf*slhhwhhvvwiski*ilwlisialiiwkimfig*velve
qeivvllihlshptkrdslrqslklwnnlvqkypmnlen*miptrkrekkvrmyywhqpv
slvevinlmlpkrikrilkennkekhmvskrkkkkrmk---

---*kgeigrcfr*krktiii*krkigscyh*yyrhtwcrwynhytffitsnrsfsscgs
tgyqsniwyftsyllrrsn*ktsigrsiryer*yskik*snnsiksnsfh*rirn**lfs
tsslesys*rcft*nyqfykyynynkryilstk*ntssr*kkiifiy*rsi*cicqkcki
*y*kdsrrssinsskywkvfcililfi

Frame C:
*ticrgtsn*n*i*tfnriaidlvs*rsdfnlyqssrdhrqsisstfklsismsiitw**
rsnrs**nh**l*k*g*nhfnrytigitwfgyqrfkscg*frlp*sfgrlcs*gr*nw*s
rkswyclyiyhtrrreilfvnh*sfgtiwfkstr*t*kie*ylrekekrr*gctigtnrf
hw*rs*i*ccrrg*key*kkttkksiwyrrgrrrrg*r---

---EKEKLAAASAEKEKQLLSEKEKLDPATTNTIVIPGVDGTIITPSSLLQTDPSVPVGQ
QAINQIFGISQVTSSEEAIKKLQLAAQLGMKGNIQKLNNQITPLNQTHFIEELEINDYSQ
QARWKVTHKDALLEITNFTNTTITTKGTFFPPNKIPAPGERKLYLYIEGPSDASVKNAKS
DIKKILDEVQSTHQSTGKYSVF*fyll

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U12181-1 (Contig-U12181-1Q)
/CSM_Contig/Contig-U12181-1Q.Seq.d
(1281 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U12181-1 (Contig-U12181-1Q) /CSM_Contig/Conti... 1324 0.0
Contig-U11893-1 (Contig-U11893-1Q) /CSM_Contig/Conti... 52 2e-06
Contig-U13964-1 (Contig-U13964-1Q) /CSM_Contig/Conti... 50 6e-06
Contig-U13660-1 (Contig-U13660-1Q) /CSM_Contig/Conti... 50 6e-06
Contig-U12479-1 (Contig-U12479-1Q) /CSM_Contig/Conti... 50 6e-06
Contig-U10818-1 (Contig-U10818-1Q) /CSM_Contig/Conti... 50 6e-06
Contig-U11129-1 (Contig-U11129-1Q) /CSM_Contig/Conti... 46 9e-05
Contig-U11444-1 (Contig-U11444-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U11038-1 (Contig-U11038-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U10817-1 (Contig-U10817-1Q) /CSM_Contig/Conti... 44 4e-04

>Contig-U12181-1 (Contig-U12181-1Q) /CSM_Contig/Contig-U12181-1Q.Seq.d
Length = 1281

Score = 1324 bits (668), Expect = 0.0
Identities = 698/698 (100%)
Strand = Plus / Plus


Query: 1 attgaacaatttgtagaggtacgtccaactgaaactagatttagacgtttaatagaattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attgaacaatttgtagaggtacgtccaactgaaactagatttagacgtttaatagaattg 60


Query: 61 ctatcgatttggtatcataaaggtcagattttaatctttaccaatcgtcaagagaccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctatcgatttggtatcataaaggtcagattttaatctttaccaatcgtcaagagaccacc 120


Query: 121 gacaatctatatcgtcaactttcaaactctcaatatcaatgtctatcattacatggtagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gacaatctatatcgtcaactttcaaactctcaatatcaatgtctatcattacatggtagt 180


Query: 181 aaagatcaaaccgatcgtgatgaaaccattagtgactttaaaaataaggttaaaaccatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaagatcaaaccgatcgtgatgaaaccattagtgactttaaaaataaggttaaaaccatt 240


Query: 241 ttaatcgctacaccattggcatcacgtggtttggatatcaaagatttaaatcttgtggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttaatcgctacaccattggcatcacgtggtttggatatcaaagatttaaatcttgtggtt 300


Query: 301 aatttcgattgccctgatcatttggaagattatgttcatagggtaggtagaactggtaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aatttcgattgccctgatcatttggaagattatgttcatagggtaggtagaactggtaga 360


Query: 361 gcaggaaatcgtggtactgcttatacatttatcacacccgacgaagagagattctcttcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcaggaaatcgtggtactgcttatacatttatcacacccgacgaagagagattctcttcg 420


Query: 421 tcaatcattaaagctttggaacaatctggttcaaaagtacccgatgaacttagaaaattg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcaatcattaaagctttggaacaatctggttcaaaagtacccgatgaacttagaaaattg 480


Query: 481 aatgatacctacgagaaaaagagaaaagaaggtaaggatgtactattggcaccaaccggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatgatacctacgagaaaaagagaaaagaaggtaaggatgtactattggcaccaaccggt 540


Query: 541 ttcactggtagaggtcataaatttgatgctgccgaagaggataaaaagaatattgaaaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttcactggtagaggtcataaatttgatgctgccgaagaggataaaaagaatattgaaaga 600


Query: 601 aaacaacaaagaaaagcatatggtatcgaagaggaagaagaagaagaggatgaagannnn 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaacaacaaagaaaagcatatggtatcgaagaggaagaagaagaagaggatgaagannnn 660


Query: 661 nnnnnnctgaaaaggagaaattggccgctgcttccgct 698
||||||||||||||||||||||||||||||||||||||
Sbjct: 661 nnnnnnctgaaaaggagaaattggccgctgcttccgct 698


Score = 1084 bits (547), Expect = 0.0
Identities = 547/547 (100%)
Strand = Plus / Plus


Query: 735 ttggatcctgctaccactaatactatcgtcatacctggtgtagatggtacaatcattaca 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ttggatcctgctaccactaatactatcgtcatacctggtgtagatggtacaatcattaca 794


Query: 795 ccttcttcattacttcaaaccgatccttcagttcctgtgggtcaacaggctatcaatcaa 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ccttcttcattacttcaaaccgatccttcagttcctgtgggtcaacaggctatcaatcaa 854


Query: 855 atatttggtatttcacaagttacctcctccgaagaagcaattaaaaaacttcaattggcc 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 atatttggtatttcacaagttacctcctccgaagaagcaattaaaaaacttcaattggcc 914


Query: 915 gctcaattaggtatgaaaggtaatattcaaaaattaaataatcaaataactccattaaat 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 gctcaattaggtatgaaaggtaatattcaaaaattaaataatcaaataactccattaaat 974


Query: 975 caaactcatttcattgaagaattagaaattaatgattattctcaacaagctcgttggaaa 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 caaactcatttcattgaagaattagaaattaatgattattctcaacaagctcgttggaaa 1034


Query: 1035 gttactcataaagatgctttacttgaaattaccaattttacaaatactacaattacaaca 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 gttactcataaagatgctttacttgaaattaccaattttacaaatactacaattacaaca 1094


Query: 1095 aaaggtacattctttccaccaaataaaataccagctccaggtgaaagaaaattatattta 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 aaaggtacattctttccaccaaataaaataccagctccaggtgaaagaaaattatattta 1154


Query: 1155 tatattgaaggtccatctgatgcatctgtcaaaaatgcaaaatctgatattaaaaagatt 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1155 tatattgaaggtccatctgatgcatctgtcaaaaatgcaaaatctgatattaaaaagatt 1214


Query: 1215 ctcgacgaagttcaatcaactcatcaaagtactggaaagtattctgtattttaattttat 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1215 ctcgacgaagttcaatcaactcatcaaagtactggaaagtattctgtattttaattttat 1274


Query: 1275 ttattac 1281
|||||||
Sbjct: 1275 ttattac 1281


>Contig-U11893-1 (Contig-U11893-1Q) /CSM_Contig/Contig-U11893-1Q.Seq.d
Length = 1661

Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus


Query: 627 cgaagaggaagaagaagaagaggatgaaga 656
|||||||||||||||||||||||| |||||
Sbjct: 425 cgaagaggaagaagaagaagaggaagaaga 454


Score = 40.1 bits (20), Expect = 0.006
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 628 gaagaggaagaagaagaaga 647
||||||||||||||||||||
Sbjct: 459 gaagaggaagaagaagaaga 478


Score = 34.2 bits (17), Expect = 0.36
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 628 gaagaggaagaagaaga 644
|||||||||||||||||
Sbjct: 441 gaagaggaagaagaaga 457


Score = 32.2 bits (16), Expect = 1.4
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 628 gaagaggaagaagaagaaga 647
||||||||||| ||||||||
Sbjct: 453 gaagaggaagaggaagaaga 472


Score = 30.2 bits (15), Expect = 5.6
Identities = 21/23 (91%)
Strand = Plus / Plus


Query: 628 gaagaggaagaagaagaagagga 650
||||| || ||||||||||||||
Sbjct: 438 gaagaagaggaagaagaagagga 460


>Contig-U13964-1 (Contig-U13964-1Q) /CSM_Contig/Contig-U13964-1Q.Seq.d
Length = 1300

Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus


Query: 628 gaagaggaagaagaagaagaggatgaaga 656
||||||||||||||||||||||| |||||
Sbjct: 187 gaagaggaagaagaagaagaggaggaaga 215


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 20,515
Number of Sequences: 6905
Number of extensions: 20515
Number of successful extensions: 3277
Number of sequences better than 10.0: 464
length of query: 1281
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1265
effective length of database: 5,564,391
effective search space: 7038954615
effective search space used: 7038954615
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.29
Homology vs DNA
Query= Contig-U12181-1 (Contig-U12181-1Q) /CSM_Contig/Contig-U12181-1Q.Seq.d
(1281 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(X81823) D.discoideum Hel2A mRNA for RNA helicase. 1154 0.0 1
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 1154 0.0 1
(AU053522) Dictyostelium discoideum slug cDNA, clone SLI836. 1031 0.0 1
(BJ440552) Dictyostelium discoideum cDNA clone:ddv44e03, 3' ... 1015 0.0 3
(AU033665) Dictyostelium discoideum slug cDNA, clone SLB286. 860 0.0 1
(AU034591) Dictyostelium discoideum slug cDNA, clone SLC582. 718 0.0 1
(AU062270) Dictyostelium discoideum slug cDNA, clone SLI836. 553 e-153 1
(CX580418) TTE00023246 Amplicon Express - Conjugative Form T... 66 4e-06 1
(CD450617) USDA-FP_102580 Adult Alate Brown Citrus Aphid Tox... 64 1e-05 1
(AZ667866) ENTIH07TR Entamoeba histolytica Sheared DNA Entam... 60 2e-04 1
(AZ548552) ENTDN95TR Entamoeba histolytica Sheared DNA Entam... 60 2e-04 1
(EX917854) lj12d05.g7 Cycas sporophyll (w/o ovule) (NYBG) Cy... 58 9e-04 1
(Z82366) R.prowazekii genomic DNA fragment (clone A337F). 58 9e-04 1
(CP000937) Francisella philomiragia subsp. philomiragia ATCC... 58 9e-04 1
(AJ235272) Rickettsia prowazekii strain Madrid E, complete g... 58 9e-04 1
(AE017197) Rickettsia typhi str. Wilmington complete genome. 58 9e-04 1
(AZ683014) ENTHN79TR Entamoeba histolytica Sheared DNA Entam... 56 0.003 1
(ER592486) 1093016205314 Global-Ocean-Sampling_GS-36-01-01-2... 56 0.003 1
(EK340813) 1095467060641 Global-Ocean-Sampling_GS-31-01-01-1... 56 0.003 1
(FG219324) Aaov02497 Antheraea assama fifth instar larval ov... 56 0.003 1
(CP000496) Pichia stipitis CBS 6054 chromosome 2, complete s... 54 0.013 1
(EL906556) INIT2_13_A10.b1_A006 G5 trophont cDNA (INIT2) Ich... 54 0.013 1
(AM629314) Entamoeba dispar GSS, clone dispar35d02.p1k. 52 0.053 1
(CP000312) Clostridium perfringens SM101, complete genome. 52 0.053 1
(BU818436) UA30CPD06 Populus tremula cambium cDNA library Po... 46 0.11 2
(DN500845) UL93TC04.5pR Populus cold stressed leaves cDNA li... 46 0.16 2
(BU812138) UL92TF09 Populus leaf cDNA library Populus tremul... 46 0.19 2
(Z71388) S.cerevisiae chromosome XIV reading frame ORF YNL112w. 50 0.21 1
(Z69382) S.cerevisiae 37,800 bp segment of chromosome XIV. 50 0.21 1
(X52649) S.cerevisiae p68 gene. 50 0.21 1
(CU329672) Schizosaccharomyces pombe chromosome III. 50 0.21 1
(AC216593) Populus trichocarpa clone POP016-L16, complete se... 50 0.21 1
(AC209099) Populus trichocarpa clone POP015-B18, complete se... 50 0.21 1
(EA376838) Sequence 25661 from patent US 7314974. 50 0.21 1
(DJ296382) Method for identification of useful proteins deri... 50 0.21 1
(DJ210459) Method for identification of useful proteins deri... 50 0.21 1
(DJ134467) Method for identification of useful proteins deri... 50 0.21 1
(DJ025882) Genome-wide DNA marker of Saccharomyces cerevisiae. 50 0.21 1
(AX829338) Sequence 58 from Patent WO03072602. 50 0.21 1
(AX818308) Sequence 58 from Patent EP1338608. 50 0.21 1
(AX594566) Sequence 220 from Patent EP1258494. 50 0.21 1
(AX536726) Sequence 327 from Patent WO02064766. 50 0.21 1
(AR941568) Sequence 327 from patent US 7101990. 50 0.21 1
(CU915546) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.21 1
(ER570600) 1093015790782 Global-Ocean-Sampling_GS-36-01-01-2... 50 0.21 1
(CP000848) Rickettsia rickettsii str. 'Sheila Smith', comple... 50 0.21 1
(CP000766) Rickettsia rickettsii str. Iowa, complete genome. 50 0.21 1
(CP000683) Rickettsia massiliae MTU5, complete genome. 50 0.21 1
(CP000361) Arcobacter butzleri RM4018, complete genome. 50 0.21 1
(AE008653) Rickettsia conorii str. Malish 7, section 85 of 1... 50 0.21 1
(EH256800) JGI_ACAC2925.rev ACAC Phakopsora pachyrhizi TW72-... 48 0.22 2
(AC133951) Mus musculus BAC clone RP23-82H2 from chromosome ... 42 0.24 4
(AC102715) Mus musculus clone RP24-491A14, WORKING DRAFT SEQ... 40 0.27 3
(AC171196) Mus musculus BAC clone RP23-182D23 from chromosom... 42 0.45 4
(AC170803) Mus musculus BAC clone RP24-418J23 from chromosom... 42 0.59 5
(AM453132) Vitis vinifera contig VV78X185740.5, whole genome... 44 0.70 4
(AC204236) Macaca mulatta clone CH250-49B21, WORKING DRAFT S... 48 0.83 1
(BH165394) ENTSP11TR Entamoeba histolytica Sheared DNA Entam... 48 0.83 1
(ER587964) 1093016178409 Global-Ocean-Sampling_GS-36-01-01-2... 48 0.83 1
(ER579384) 1093015828620 Global-Ocean-Sampling_GS-36-01-01-2... 48 0.83 1
(ER513718) 1093015478168 Global-Ocean-Sampling_GS-35-01-01-1... 48 0.83 1
(EJ896978) 1093018471430 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.83 1
(AM661116) Entamoeba moshkovskii FIC GSS, clone mosh106a04.p1k. 48 0.83 1
(AM659505) Entamoeba moshkovskii FIC GSS, clone mosh090e06.q1k. 48 0.83 1
(EJ788223) 1093017363944 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.83 1
(EJ420521) 1093012227621 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.83 1
(EJ325628) 1092963382060 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.83 1
(EJ310512) 1095390201814 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.83 1
(EJ238681) 1095326013549 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.83 1
(EJ165916) 1092344065785 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.83 1
(EH255883) JGI_ACAC776.rev ACAC Phakopsora pachyrhizi TW72-1... 48 0.83 1
(CK270803) EST716881 potato abiotic stress cDNA library Sola... 48 0.83 1
(CP000743) Methanococcus aeolicus Nankai-3, complete genome. 48 0.83 1
(AE017126) Prochlorococcus marinus subsp. marinus str. CCMP1... 48 0.83 1
(AC006279) Plasmodium falciparum chromosome 12 clone 3D7, **... 38 1.3 9
(DT998583) CNB196-H01.y1d-s SHGC-CNB Gasterosteus aculeatus ... 40 1.5 2
(AX344507) Sequence 354 from Patent WO0200926. 36 1.6 5
(BX000350) Mouse DNA sequence *** SEQUENCING CANCELLED *** f... 38 1.6 5
(CR626875) Zebrafish DNA sequence from clone DKEY-31J4 in li... 34 1.7 2
(AC154243) Mus musculus BAC clone RP24-173F3 from 14, comple... 42 1.8 4
(AX345541) Sequence 612 from Patent WO0200928. 40 1.9 3
(BX210620) Danio rerio genomic clone DKEY-251I3, genomic sur... 34 2.2 2
(EJ743502) 1092962037183 Global-Ocean-Sampling_GS-30-02-01-1... 38 2.3 3
(AC128701) Mus musculus BAC clone RP24-131M3 from chromosome... 42 2.3 7
(AC225482) Medicago truncatula clone mth2-25d10, WORKING DRA... 40 2.5 7
(AL035424) Human DNA sequence from clone RP6-22D12 on chromo... 36 2.8 4
(AY954970) Staphylococcus phage Twort, complete genome. 38 3.0 6
(AC167127) Mus musculus chromosome 3 clone RP23-192O10 map 3... 40 3.0 3
(CE404652) tigr-gss-dog-17000334758039 Dog Library Canis lup... 36 3.1 2
(AC155075) Mus musculus chromosome 5, clone RP24-82B9, compl... 38 3.2 6
(EK242402) 1095460237960 Global-Ocean-Sampling_GS-31-01-01-1... 34 3.2 3
(AM470541) Vitis vinifera contig VV78X057701.11, whole genom... 46 3.3 1
(AC152775) Bos taurus clone CH240-15L23, WORKING DRAFT SEQUE... 46 3.3 1
(AC106423) Rattus norvegicus clone CH230-144H16, *** SEQUENC... 46 3.3 1
(AC216438) Oryza punctata clone OP__Ba0080P01, *** SEQUENCIN... 46 3.3 1
(AC174856) Atelerix albiventris clone LB4-393B21, WORKING DR... 46 3.3 1
(AC173447) Atelerix albiventris clone LB4-338G15, WORKING DR... 46 3.3 1
(AZ532406) ENTBY35TF Entamoeba histolytica Sheared DNA Entam... 46 3.3 1
(AZ528190) ENTBO11TR Entamoeba histolytica Sheared DNA Entam... 46 3.3 1
(FH523692) CHO_OF4722xf16f1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 3.3 1

>(X81823) D.discoideum Hel2A mRNA for RNA helicase.
Length = 1748

Score = 1154 bits (582), Expect = 0.0
Identities = 582/582 (100%)
Strand = Plus / Plus


Query: 1 attgaacaatttgtagaggtacgtccaactgaaactagatttagacgtttaatagaattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 attgaacaatttgtagaggtacgtccaactgaaactagatttagacgtttaatagaattg 788


Query: 61 ctatcgatttggtatcataaaggtcagattttaatctttaccaatcgtcaagagaccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 ctatcgatttggtatcataaaggtcagattttaatctttaccaatcgtcaagagaccacc 848


Query: 121 gacaatctatatcgtcaactttcaaactctcaatatcaatgtctatcattacatggtagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 gacaatctatatcgtcaactttcaaactctcaatatcaatgtctatcattacatggtagt 908


Query: 181 aaagatcaaaccgatcgtgatgaaaccattagtgactttaaaaataaggttaaaaccatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 aaagatcaaaccgatcgtgatgaaaccattagtgactttaaaaataaggttaaaaccatt 968


Query: 241 ttaatcgctacaccattggcatcacgtggtttggatatcaaagatttaaatcttgtggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 ttaatcgctacaccattggcatcacgtggtttggatatcaaagatttaaatcttgtggtt 1028


Query: 301 aatttcgattgccctgatcatttggaagattatgttcatagggtaggtagaactggtaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 aatttcgattgccctgatcatttggaagattatgttcatagggtaggtagaactggtaga 1088


Query: 361 gcaggaaatcgtggtactgcttatacatttatcacacccgacgaagagagattctcttcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 gcaggaaatcgtggtactgcttatacatttatcacacccgacgaagagagattctcttcg 1148


Query: 421 tcaatcattaaagctttggaacaatctggttcaaaagtacccgatgaacttagaaaattg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1149 tcaatcattaaagctttggaacaatctggttcaaaagtacccgatgaacttagaaaattg 1208


Query: 481 aatgatacctacgagaaaaagagaaaagaaggtaaggatgtactattggcaccaaccggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1209 aatgatacctacgagaaaaagagaaaagaaggtaaggatgtactattggcaccaaccggt 1268


Query: 541 ttcactggtagaggtcataaatttgatgctgccgaagaggat 582
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1269 ttcactggtagaggtcataaatttgatgctgccgaagaggat 1310

Score = 549 bits (277), Expect(2) = e-164
Identities = 277/277 (100%)
Strand = Plus / Plus


Query: 735 ttggatcctgctaccactaatactatcgtcatacctggtgtagatggtacaatcattaca 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1464 ttggatcctgctaccactaatactatcgtcatacctggtgtagatggtacaatcattaca 1523


Query: 795 ccttcttcattacttcaaaccgatccttcagttcctgtgggtcaacaggctatcaatcaa 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 ccttcttcattacttcaaaccgatccttcagttcctgtgggtcaacaggctatcaatcaa 1583


Query: 855 atatttggtatttcacaagttacctcctccgaagaagcaattaaaaaacttcaattggcc 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1584 atatttggtatttcacaagttacctcctccgaagaagcaattaaaaaacttcaattggcc 1643


Query: 915 gctcaattaggtatgaaaggtaatattcaaaaattaaataatcaaataactccattaaat 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1644 gctcaattaggtatgaaaggtaatattcaaaaattaaataatcaaataactccattaaat 1703


Query: 975 caaactcatttcattgaagaattagaaattaatgatt 1011
|||||||||||||||||||||||||||||||||||||
Sbjct: 1704 caaactcatttcattgaagaattagaaattaatgatt 1740

Score = 63.9 bits (32), Expect(2) = e-164
Identities = 32/32 (100%)
Strand = Plus / Plus


Query: 667 ctgaaaaggagaaattggccgctgcttccgct 698
||||||||||||||||||||||||||||||||
Sbjct: 1396 ctgaaaaggagaaattggccgctgcttccgct 1427

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,371,904,919
Number of extensions: 86712408
Number of successful extensions: 7862948
Number of sequences better than 10.0: 157
Length of query: 1281
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1257
Effective length of database: 97,308,875,965
Effective search space: 122317257088005
Effective search space used: 122317257088005
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 2
Homology vs Protein
Query= Contig-U12181-1 (Contig-U12181-1Q) /CSM_Contig/Contig-U12181-1Q.Seq.d
(1281 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC115598_49(AC115598|pid:none) Dictyostelium discoideum chromoso... 389 0.0
S53814(S53814) DEAD box protein - slime mold (Dictyostelium disc... 389 e-153
(Q8H0U8) RecName: Full=DEAD-box ATP-dependent RNA helicase 42; ... 198 4e-49
CR954209_78(CR954209|pid:none) Ostreococcus tauri strain OTTH059... 196 2e-48
(Q84UQ1) RecName: Full=DEAD-box ATP-dependent RNA helicase 42; ... 189 2e-46
(Q4TVV3) RecName: Full=Probable ATP-dependent RNA helicase DDX46... 179 1e-43
(Q7L014) RecName: Full=Probable ATP-dependent RNA helicase DDX46... 179 2e-43
AB018344_1(AB018344|pid:none) Homo sapiens mRNA for KIAA0801 pro... 179 2e-43
AK129220_1(AK129220|pid:none) Mus musculus premature mRNA for mK... 179 2e-43
BC092240_1(BC092240|pid:none) Mus musculus DEAD (Asp-Glu-Ala-Asp... 179 2e-43
AF106680_1(AF106680|pid:none) Homo sapiens RNA helicase mRNA, co... 179 2e-43
(Q5R6D8) RecName: Full=Probable ATP-dependent RNA helicase DDX46... 179 2e-43
(Q569Z5) RecName: Full=Probable ATP-dependent RNA helicase DDX46... 179 2e-43
AK291788_1(AK291788|pid:none) Homo sapiens cDNA FLJ78679 complet... 179 2e-43
(A7ENE0) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 174 8e-42
(Q9P7C7) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 174 8e-42
(A6RW79) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 172 2e-41
AE014298_2227(AE014298|pid:none) Drosophila melanogaster chromos... 171 4e-41
(A1D373) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 171 4e-41
FJ764844_8(FJ764844|pid:none) Drosophila melanogaster strain A33... 171 4e-41
FJ764841_8(FJ764841|pid:none) Drosophila melanogaster strain A18... 171 4e-41
FJ764836_8(FJ764836|pid:none) Drosophila melanogaster strain A84... 171 4e-41
AM920431_544(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 171 5e-41
(Q5KME7) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 171 5e-41
(A2QQA8) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 171 5e-41
(Q4WT99) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 171 5e-41
(A1CQA9) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 170 9e-41
(Q4IP34) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 170 9e-41
FN357865_5(FN357865|pid:none) Schistosoma mansoni genome sequenc... 170 1e-40
(Q2U2J6) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 170 1e-40
(A4RN46) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 168 3e-40
(Q5BDW4) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 167 8e-40
(Q7SH33) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 163 1e-38
CU633867_51(CU633867|pid:none) Podospora anserina genomic DNA ch... 159 2e-37
CP000589_75(CP000589|pid:none) Ostreococcus lucimarinus CCE9901 ... 154 9e-36
AK134073_1(AK134073|pid:none) Mus musculus adult male thymus cDN... 154 9e-36
(Q0J7Y8) RecName: Full=DEAD-box ATP-dependent RNA helicase 45; ... 153 1e-35
AF045641_1(AF045641|pid:none) Caenorhabditis elegans cosmid F53H... 152 3e-35
CR548612_174(CR548612|pid:none) Paramecium tetraurelia macronucl... 152 3e-35
CR940352_511(CR940352|pid:none) Theileria annulata strain Ankara... 151 6e-35
(Q6CCZ1) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 145 2e-33
AM910992_244(AM910992|pid:none) Plasmodium knowlesi strain H chr... 136 2e-30
AL844504_86(AL844504|pid:none) Plasmodium falciparum 3D7 chromos... 135 3e-30
FN392321_659(FN392321|pid:none) Pichia pastoris GS115 chromosome... 127 7e-28
(A3LQ55) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 118 5e-25
AB008265_8(AB008265|pid:none) Arabidopsis thaliana genomic DNA, ... 117 7e-25
(Q8W4R3) RecName: Full=DEAD-box ATP-dependent RNA helicase 30; ... 117 7e-25
(Q5QMN3) RecName: Full=DEAD-box ATP-dependent RNA helicase 20; ... 115 3e-24
EU195919_1(EU195919|pid:none) Phytophthora infestans putative RN... 114 6e-24
FN357329_33(FN357329|pid:none) Schistosoma mansoni genome sequen... 114 8e-24
BT041534_1(BT041534|pid:none) Zea mays full-length cDNA clone ZM... 114 1e-23
(A5E058) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 114 1e-23
BT062249_1(BT062249|pid:none) Zea mays full-length cDNA clone ZM... 111 5e-23
FM992690_630(FM992690|pid:none) Candida dubliniensis CD36 chromo... 111 5e-23
FB905455_1(FB905455|pid:none) Sequence 124728 from Patent WO2008... 111 5e-23
AP003244_7(AP003244|pid:none) Oryza sativa Japonica Group genomi... 111 6e-23
AJ010470_1(AJ010470|pid:none) Arabidopsis thaliana mRNA for DEAD... 110 1e-22
AM910996_435(AM910996|pid:none) Plasmodium knowlesi strain H chr... 110 1e-22
(Q5N7W4) RecName: Full=DEAD-box ATP-dependent RNA helicase 30; ... 108 3e-22
FB905433_1(FB905433|pid:none) Sequence 124706 from Patent WO2008... 108 3e-22
AC144760_19(AC144760|pid:none) Medicago truncatula clone mth2-8p... 108 3e-22
AP008217_1499(AP008217|pid:none) Oryza sativa (japonica cultivar... 108 3e-22
(Q54CE0) RecName: Full=Probable ATP-dependent RNA helicase ddx17... 108 4e-22
(Q6BML1) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 108 5e-22
FN357329_34(FN357329|pid:none) Schistosoma mansoni genome sequen... 108 5e-22
DQ019638_1(DQ019638|pid:none) Triticum aestivum DEAD-box ATPase-... 107 1e-21
(Q5VQL1) RecName: Full=DEAD-box ATP-dependent RNA helicase 14; ... 106 2e-21
AF096248_1(AF096248|pid:none) Lycopersicon esculentum ethylene-r... 105 4e-21
(Q7SEL0) RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helic... 105 5e-21
AY466159_1(AY466159|pid:none) Zea mays DEAD box RNA helicase (DR... 104 6e-21
FN319675_1(FN319675|pid:none) Schistosoma japonicum isolate Anhu... 103 2e-20
(O22907) RecName: Full=DEAD-box ATP-dependent RNA helicase 24; ... 103 2e-20
AE014297_711(AE014297|pid:none) Drosophila melanogaster chromoso... 103 2e-20
AM777061_1(AM777061|pid:none) Anopheles arabiensis partial ENSAN... 103 2e-20
FN319674_1(FN319674|pid:none) Schistosoma japonicum isolate Anhu... 103 2e-20
(Q5JKF2) RecName: Full=DEAD-box ATP-dependent RNA helicase 40; ... 102 2e-20
AK228819_1(AK228819|pid:none) Arabidopsis thaliana mRNA for DRH1... 102 2e-20
AF188678_1(AF188678|pid:none) Pisum sativum P72 DEAD box protein... 102 2e-20
FB905427_1(FB905427|pid:none) Sequence 124700 from Patent WO2008... 102 2e-20
AL163792_10(AL163792|pid:none) Arabidopsis thaliana DNA chromoso... 102 2e-20
AF428313_1(AF428313|pid:none) Arabidopsis thaliana AT3g01540/F4P... 101 5e-20
AY062591_1(AY062591|pid:none) Arabidopsis thaliana RNA helicase,... 101 5e-20
(Q8H136) RecName: Full=DEAD-box ATP-dependent RNA helicase 14; ... 101 5e-20
BT000795_1(BT000795|pid:none) Arabidopsis thaliana putative RNA ... 101 5e-20
(Q5KFM6) RecName: Full=ATP-dependent RNA helicase DBP2-A; ... 101 7e-20
AE017346_128(AE017346|pid:none) Cryptococcus neoformans var. neo... 101 7e-20
AM910994_603(AM910994|pid:none) Plasmodium knowlesi strain H chr... 100 9e-20
EF219412_1(EF219412|pid:none) Tetrahymena thermophila Lia2p (LIA... 100 1e-19
(Q6FLF3) RecName: Full=ATP-dependent RNA helicase DBP2; ... 99 3e-19
EU955920_1(EU955920|pid:none) Zea mays clone 1552463 pre-mRNA-pr... 99 3e-19
CR954213_263(CR954213|pid:none) Ostreococcus tauri strain OTTH05... 99 4e-19
(Q2HEB0) RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helic... 99 4e-19
(Q8SRB2) RecName: Full=ATP-dependent RNA helicase DBP2; ... 98 7e-19
AF110007_1(AF110007|pid:none) Molgula oculata p68 RNA helicase (... 97 1e-18
BC117660_1(BC117660|pid:none) Danio rerio similar to Probable RN... 97 1e-18
BC134863_1(BC134863|pid:none) Danio rerio similar to Probable RN... 97 1e-18
(Q92841) RecName: Full=Probable ATP-dependent RNA helicase DDX17... 97 2e-18
BC000595_1(BC000595|pid:none) Homo sapiens DEAD (Asp-Glu-Ala-Asp... 97 2e-18
(P09052) RecName: Full=ATP-dependent RNA helicase vasa; ... 97 2e-18
BC151648_1(BC151648|pid:none) Bos taurus DEAD (Asp-Glu-Ala-Asp) ... 97 2e-18
AB168153_1(AB168153|pid:none) Macaca fascicularis testis cDNA cl... 97 2e-18
AY084126_1(AY084126|pid:none) Drosophila melanogaster RE20606 fu... 97 2e-18
BC066938_1(BC066938|pid:none) Homo sapiens DEAD (Asp-Glu-Ala-Asp... 96 3e-18
AE014298_1133(AE014298|pid:none) Drosophila melanogaster chromos... 96 3e-18
BC121888_1(BC121888|pid:none) Xenopus tropicalis DEAD (Asp-Glu-A... 95 5e-18
AY957503_1(AY957503|pid:none) Anopheles gambiae vasa-like protei... 95 5e-18
DQ158856_78(DQ158856|pid:none) Bigelowiella natans nucleomorph c... 95 6e-18
(Q6YS30) RecName: Full=DEAD-box ATP-dependent RNA helicase 5; ... 94 8e-18
AB110202_1(AB110202|pid:none) Oryza sativa Japonica Group mRNA f... 94 8e-18
T22917(T22917) probable ATP-dependent RNA helicase F58E10.3 [sim... 94 8e-18
(Q5R4I9) RecName: Full=Probable ATP-dependent RNA helicase DDX5;... 94 1e-17
AK013106_1(AK013106|pid:none) Mus musculus 10, 11 days embryo wh... 94 1e-17
AB451382_1(AB451382|pid:none) Homo sapiens DDX5 mRNA for ATP-dep... 94 1e-17
(A5A6J2) RecName: Full=Probable ATP-dependent RNA helicase DDX5;... 94 1e-17
(Q61656) RecName: Full=Probable ATP-dependent RNA helicase DDX5;... 94 1e-17
AY821682_1(AY821682|pid:none) Carassius auratus DEAD-box RNA-dep... 94 1e-17
AK132779_1(AK132779|pid:none) Mus musculus adult male testis cDN... 94 1e-17
AB170341_1(AB170341|pid:none) Macaca fascicularis brain cDNA clo... 94 1e-17
(Q54IV3) RecName: Full=Probable ATP-dependent RNA helicase ddx42... 94 1e-17
AK297905_1(AK297905|pid:none) Homo sapiens cDNA FLJ59357 complet... 94 1e-17
AB169223_1(AB169223|pid:none) Macaca fascicularis testis cDNA, c... 94 1e-17
BC129873_1(BC129873|pid:none) Mus musculus DEAD (Asp-Glu-Ala-Asp... 94 1e-17
BC103318_1(BC103318|pid:none) Bos taurus DEAD (Asp-Glu-Ala-Asp) ... 94 1e-17
(A3LQW7) RecName: Full=ATP-dependent RNA helicase DBP2; ... 93 2e-17
CU928168_385(CU928168|pid:none) Kluyveromyces thermotolerans str... 93 2e-17
AF110008_1(AF110008|pid:none) Molgula occulta p68 RNA helicase (... 93 2e-17
BC082849_1(BC082849|pid:none) Xenopus laevis p68 RNA helicase, m... 93 2e-17
AB205013_1(AB205013|pid:none) Tubifex tubifex Ttu-vas mRNA for D... 93 2e-17
AM459847_1(AM459847|pid:none) Vitis vinifera contig VV78X063071.... 93 2e-17
AF218580_1(AF218580|pid:none) Xenopus laevis p68 RNA helicase mR... 92 3e-17
AF513908_1(AF513908|pid:none) Drosophila virilis DEAD-box RNA he... 92 3e-17
FN392322_194(FN392322|pid:none) Pichia pastoris GS115 chromosome... 92 4e-17
CP000447_2774(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 92 4e-17
AM920433_346(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 92 4e-17
AK135173_1(AK135173|pid:none) Mus musculus 12 days embryo female... 92 5e-17
BC067585_1(BC067585|pid:none) Danio rerio DEAD (Asp-Glu-Ala-Asp)... 92 5e-17
(Q5B0J9) RecName: Full=ATP-dependent RNA helicase dbp2; ... 92 5e-17
CP001071_15(CP001071|pid:none) Akkermansia muciniphila ATCC BAA-... 92 5e-17
(Q5F485) RecName: Full=ATP-dependent RNA helicase DDX42; ... 92 5e-17
CT005272_221(CT005272|pid:none) Leishmania major strain Friedlin... 91 7e-17
(Q5BCU6) RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helic... 91 7e-17
BC078667_1(BC078667|pid:none) Homo sapiens DEAD (Asp-Glu-Ala-Asp... 91 9e-17
(Q5R7D1) RecName: Full=ATP-dependent RNA helicase DDX42; ... 91 9e-17
AK292908_1(AK292908|pid:none) Homo sapiens cDNA FLJ78746 complet... 91 9e-17
(A7TJ36) RecName: Full=ATP-dependent RNA helicase DBP3; ... 91 9e-17
AC006665_5(AC006665|pid:none) Caenorhabditis elegans fosmid H27M... 91 9e-17
AK122737_1(AK122737|pid:none) Homo sapiens cDNA FLJ16253 fis, cl... 91 9e-17
AE014296_1228(AE014296|pid:none) Drosophila melanogaster chromos... 91 9e-17
BC157683_1(BC157683|pid:none) Xenopus tropicalis hypothetical pr... 91 9e-17
(P24783) RecName: Full=ATP-dependent RNA helicase DBP2; ... 91 9e-17
(A2QFL3) RecName: Full=ATP-dependent RNA helicase dbp3; ... 91 9e-17
(A5DAC8) RecName: Full=ATP-dependent RNA helicase DBP3; ... 91 1e-16
(Q1DP69) RecName: Full=ATP-dependent RNA helicase DBP2; ... 91 1e-16
AM502254_469(AM502254|pid:none) Leishmania infantum chromosome 36. 91 1e-16
(Q7ZY47) RecName: Full=ATP-dependent RNA helicase DDX42; ... 91 1e-16
AK049311_1(AK049311|pid:none) Mus musculus ES cells cDNA, RIKEN ... 91 1e-16
(Q6CT46) RecName: Full=ATP-dependent RNA helicase DBP3; ... 91 1e-16
(Q810A7) RecName: Full=ATP-dependent RNA helicase DDX42; ... 91 1e-16
BC047981_1(BC047981|pid:none) Xenopus laevis similar to DEAD/H (... 91 1e-16
AE014297_392(AE014297|pid:none) Drosophila melanogaster chromoso... 90 2e-16
(A7EGG4) RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helic... 90 2e-16
(Q6C4D4) RecName: Full=ATP-dependent RNA helicase DBP2; ... 90 2e-16
(P19109) RecName: Full=ATP-dependent RNA helicase p62; ... 90 2e-16
AE014297_390(AE014297|pid:none) Drosophila melanogaster chromoso... 90 2e-16
S11485(S11485) RNA helicase - fruit fly (Drosophila melanogaster... 90 2e-16
(Q2U070) RecName: Full=ATP-dependent RNA helicase dbp2; ... 90 2e-16
(Q1DMX8) RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helic... 90 2e-16
(Q59W52) RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helic... 90 2e-16
BT066418_1(BT066418|pid:none) Zea mays full-length cDNA clone ZM... 90 2e-16
CP000081_306(CP000081|pid:none) Leishmania major chromosome 35, ... 90 2e-16
(Q7SBC6) RecName: Full=ATP-dependent RNA helicase dbp-2; ... 90 2e-16
AM494971_301(AM494971|pid:none) Leishmania braziliensis chromoso... 90 2e-16
(Q755A5) RecName: Full=ATP-dependent RNA helicase DBP3; ... 89 3e-16
AF2395(AF2395) ATP-dependent RNA helicase [imported] - Nostoc sp... 89 3e-16
U13070_1(U13070|pid:none) Caenorhabditis elegans cosmid F01F1, c... 89 3e-16
AM494972_237(AM494972|pid:none) Leishmania braziliensis chromoso... 89 4e-16
(Q26696) RecName: Full=Putative DEAD-box RNA helicase HEL64; ... 89 4e-16
(P20447) RecName: Full=ATP-dependent RNA helicase DBP3; ... 88 6e-16
CP000117_1948(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 88 6e-16
(A1DGZ7) RecName: Full=ATP-dependent RNA helicase dbp2; ... 88 6e-16
(A6ZUA1) RecName: Full=ATP-dependent RNA helicase DBP3; ... 88 6e-16
AB378065_1(AB378065|pid:none) Gryllus bimaculatus vas mRNA for v... 88 6e-16
(A6RGE3) RecName: Full=ATP-dependent RNA helicase DBP2; ... 88 8e-16
AM452377_2(AM452377|pid:none) Vitis vinifera contig VV78X261484.... 88 8e-16
BA000045_2325(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 88 8e-16
CP001389_1495(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 88 8e-16
(Q6FS54) RecName: Full=ATP-dependent RNA helicase DBP3; ... 88 8e-16
(A1CHL3) RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helic... 88 8e-16
(Q4I7F9) RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helic... 88 8e-16
CP000721_2740(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 88 8e-16
CU928180_189(CU928180|pid:none) Kluyveromyces thermotolerans str... 87 1e-15
(Q0CL13) RecName: Full=ATP-dependent RNA helicase dbp3; ... 87 1e-15
(Q9LU46) RecName: Full=DEAD-box ATP-dependent RNA helicase 35; ... 87 1e-15
BC060524_1(BC060524|pid:none) Danio rerio DEAD (Asp-Glu-Ala-Asp)... 87 1e-15
(Q0CLX0) RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helic... 87 1e-15
CP000227_5172(CP000227|pid:none) Bacillus cereus Q1, complete ge... 87 1e-15
DQ443224_1(DQ443224|pid:none) Bombyx mori DEAD box polypeptide 5... 87 1e-15
(A5DS77) RecName: Full=ATP-dependent RNA helicase DBP2; ... 87 1e-15
(Q9Y7T7) RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helic... 87 1e-15
(A1C5V3) RecName: Full=ATP-dependent RNA helicase dbp3; ... 87 1e-15
DQ443223_1(DQ443223|pid:none) Bombyx mori DEAD box polypeptide 5... 87 1e-15
AE017194_5556(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 87 1e-15
CP001177_5403(CP001177|pid:none) Bacillus cereus AH187, complete... 87 1e-15
AP008214_263(AP008214|pid:none) Oryza sativa (japonica cultivar-... 87 2e-15
AF026402_1(AF026402|pid:none) Homo sapiens U5 snRNP 100 kD prote... 87 2e-15
AK292921_1(AK292921|pid:none) Homo sapiens cDNA FLJ77678 complet... 87 2e-15
AK128428_1(AK128428|pid:none) Homo sapiens cDNA FLJ46571 fis, cl... 87 2e-15
BC147902_1(BC147902|pid:none) Bos taurus DEAD (Asp-Glu-Ala-Asp) ... 87 2e-15
(Q5RC67) RecName: Full=Probable ATP-dependent RNA helicase DDX23... 87 2e-15
BC169082_1(BC169082|pid:none) Rattus norvegicus DEAD (Asp-Glu-Al... 87 2e-15
(Q6BY27) RecName: Full=ATP-dependent RNA helicase DBP2; ... 87 2e-15
(Q4IF76) RecName: Full=ATP-dependent RNA helicase DBP2; ... 86 2e-15
CP000302_2558(CP000302|pid:none) Shewanella denitrificans OS217,... 86 2e-15
AB264678_1(AB264678|pid:none) Papilio xuthus mRNA for DEAD box p... 86 2e-15
(Q4X195) RecName: Full=ATP-dependent RNA helicase dbp2; ... 86 3e-15
(Q0UWC8) RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helic... 86 3e-15
(A6QXC1) RecName: Full=ATP-dependent RNA helicase DBP3; ... 86 3e-15
BT061521_1(BT061521|pid:none) Zea mays full-length cDNA clone ZM... 86 4e-15
X52648_1(X52648|pid:none) Schizosaccharomyces pombe p68 gene for... 86 4e-15
AB193326_1(AB193326|pid:none) Moina macrocopa vasa mRNA for VASA... 86 4e-15
(Q5A4E2) RecName: Full=ATP-dependent RNA helicase DED1; ... 86 4e-15
(Q62095) RecName: Full=ATP-dependent RNA helicase DDX3Y; ... 86 4e-15
CP000090_896(CP000090|pid:none) Ralstonia eutropha JMP134 chromo... 86 4e-15
AM293618_1(AM293618|pid:none) Platanus x acerifolia partial mRNA... 86 4e-15
AP008208_322(AP008208|pid:none) Oryza sativa (japonica cultivar-... 86 4e-15
CP000485_4704(CP000485|pid:none) Bacillus thuringiensis str. Al ... 86 4e-15
(P24782) RecName: Full=ATP-dependent RNA helicase dbp2; ... 86 4e-15
AE017355_5084(AE017355|pid:none) Bacillus thuringiensis serovar ... 85 5e-15
(A4QSS5) RecName: Full=ATP-dependent RNA helicase DBP2; ... 85 5e-15
CP000001_5098(CP000001|pid:none) Bacillus cereus E33L, complete ... 85 5e-15
AM920436_1143(AM920436|pid:none) Penicillium chrysogenum Wiscons... 85 5e-15
AE016879_5277(AE016879|pid:none) Bacillus anthracis str. Ames, c... 85 5e-15
AB306294_1(AB306294|pid:none) Enchytraeus japonensis Ej-vasa2 mR... 85 5e-15
FM992690_568(FM992690|pid:none) Candida dubliniensis CD36 chromo... 85 5e-15
(A7E449) RecName: Full=ATP-dependent RNA helicase dbp2; ... 85 5e-15
EF467228_1(EF467228|pid:none) Hydractinia echinata vasa-like pro... 85 5e-15
FM992688_1042(FM992688|pid:none) Candida dubliniensis CD36 chrom... 85 6e-15
AL590442_66(AL590442|pid:none) chromosome II of strain GB-M1 of ... 85 6e-15
CP000633_1770(CP000633|pid:none) Agrobacterium vitis S4 chromoso... 85 6e-15
AB236766_1(AB236766|pid:none) Trifolium pratense RNA for putativ... 85 6e-15
D86601_1(D86601|pid:none) Bombyx mori BmVLG mRNA, complete cds. 85 6e-15
BT066681_1(BT066681|pid:none) Zea mays full-length cDNA clone ZM... 85 6e-15
AM494969_47(AM494969|pid:none) Leishmania braziliensis chromosom... 85 6e-15
AY957502_1(AY957502|pid:none) Aedes aegypti vasa-like protein mR... 85 6e-15
AB306293_1(AB306293|pid:none) Enchytraeus japonensis Ej-vasa1 mR... 85 6e-15
FJ542313_1(FJ542313|pid:none) Bombyx mori strain Dazao clone 3 v... 85 6e-15
CP000724_2970(CP000724|pid:none) Alkaliphilus metalliredigens QY... 85 6e-15
EF710645_42(EF710645|pid:none) Glyptapanteles flavicoxis clone B... 84 8e-15
AM260525_831(AM260525|pid:none) Bartonella tribocorum CIP 105476... 84 8e-15
CR628337_305(CR628337|pid:none) Legionella pneumophila str. Lens... 84 8e-15
EF601037_1(EF601037|pid:none) Scaptotrigona postica vasa mRNA, p... 84 8e-15
EF601038_1(EF601038|pid:none) Melipona scutellaris vasa mRNA, pa... 84 8e-15
(A5DL80) RecName: Full=ATP-dependent RNA helicase DBP2; ... 84 8e-15
Z69382_20(Z69382|pid:none) S.cerevisiae 37,800 bp segment of chr... 84 8e-15
AM502250_77(AM502250|pid:none) Leishmania infantum chromosome 32. 84 8e-15
CP001055_760(CP001055|pid:none) Elusimicrobium minutum Pei191, c... 84 8e-15
FM992688_926(FM992688|pid:none) Candida dubliniensis CD36 chromo... 84 8e-15
CP000675_322(CP000675|pid:none) Legionella pneumophila str. Corb... 84 8e-15
CP001327_478(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 84 8e-15
CP000680_418(CP000680|pid:none) Pseudomonas mendocina ymp, compl... 84 8e-15
DQ288391_1(DQ288391|pid:none) Apis mellifera vasa protein (vasa)... 84 8e-15
CR954210_193(CR954210|pid:none) Ostreococcus tauri strain OTTH05... 84 8e-15
(Q5RF43) RecName: Full=ATP-dependent RNA helicase DDX3Y; ... 84 1e-14
(Q7S5R1) RecName: Full=ATP-dependent RNA helicase dbp-3; ... 84 1e-14
AE014134_3041(AE014134|pid:none) Drosophila melanogaster chromos... 84 1e-14
CT573326_4678(CT573326|pid:none) Pseudomonas entomophila str. L4... 84 1e-14
CP000949_3802(CP000949|pid:none) Pseudomonas putida W619, comple... 84 1e-14
(P16381) RecName: Full=Putative ATP-dependent RNA helicase Pl10;... 84 1e-14
(A5DQS0) RecName: Full=ATP-dependent RNA helicase DED1; ... 84 1e-14
AM502246_216(AM502246|pid:none) Leishmania infantum chromosome 28. 84 1e-14
CP000075_3790(CP000075|pid:none) Pseudomonas syringae pv. syring... 84 1e-14
C87818(C87818) protein glh-1 [imported] - Caenorhabditis elegans... 84 1e-14
(P93008) RecName: Full=DEAD-box ATP-dependent RNA helicase 21; ... 84 1e-14
AB193325_1(AB193325|pid:none) Artemia franciscana vasa mRNA for ... 84 1e-14
CP000758_2233(CP000758|pid:none) Ochrobactrum anthropi ATCC 4918... 84 1e-14
U62772_1(U62772|pid:none) Caenorhabditis elegans RNA helicase (g... 84 1e-14
(P34689) RecName: Full=ATP-dependent RNA helicase glh-1; ... 84 1e-14
CR940352_454(CR940352|pid:none) Theileria annulata strain Ankara... 83 2e-14
EU289291_1(EU289291|pid:none) Parhyale hawaiensis Vasa mRNA, com... 83 2e-14
(Q4PDT1) RecName: Full=ATP-dependent RNA helicase DBP3; ... 83 2e-14
BC063374_1(BC063374|pid:none) Xenopus tropicalis DEAD/H (Asp-Glu... 83 2e-14
(A1DG51) RecName: Full=ATP-dependent RNA helicase dbp3; ... 83 2e-14
AF479820_1(AF479820|pid:none) Cyprinus carpio DEAD box RNA helic... 83 2e-14
AE008692_1214(AE008692|pid:none) Zymomonas mobilis subsp. mobili... 83 2e-14
AL009126_4037(AL009126|pid:none) Bacillus subtilis subsp. subtil... 83 2e-14
CP001132_1126(CP001132|pid:none) Acidithiobacillus ferrooxidans ... 83 2e-14
AK302172_1(AK302172|pid:none) Homo sapiens cDNA FLJ50912 complet... 83 2e-14
AF000984_1(AF000984|pid:none) Homo sapiens dead box, Y isoform (... 83 2e-14
AJ850054_1(AJ850054|pid:none) Rana lessonae mRNA for Pl10-relate... 83 2e-14
L19948_1(L19948|pid:none) Caenorhabditis elegans RNA helicase (g... 82 3e-14
CP000724_3631(CP000724|pid:none) Alkaliphilus metalliredigens QY... 82 3e-14
(P24346) RecName: Full=Putative ATP-dependent RNA helicase an3; ... 82 3e-14
CP000852_1739(CP000852|pid:none) Caldivirga maquilingensis IC-16... 82 3e-14
AM048812_1(AM048812|pid:none) Platynereis dumerilii mRNA for vas... 82 3e-14
FJ696704_1(FJ696704|pid:none) Leishmania tarentolae strain UC AT... 82 3e-14
BC094097_1(BC094097|pid:none) Xenopus laevis cDNA clone MGC:1150... 82 3e-14
BX897700_657(BX897700|pid:none) Bartonella quintana str. Toulous... 82 3e-14
FJ605736_1(FJ605736|pid:none) Asterias forbesi vasa mRNA, comple... 82 3e-14
(Q6GVM6) RecName: Full=ATP-dependent RNA helicase DDX3Y; ... 82 3e-14
BC150862_1(BC150862|pid:none) Mus musculus DEAD/H (Asp-Glu-Ala-A... 82 3e-14
EU956781_1(EU956781|pid:none) Zea mays clone 1573776 ATP-depende... 82 3e-14
BT084880_1(BT084880|pid:none) Zea mays full-length cDNA clone ZM... 82 3e-14
(Q5APT8) RecName: Full=ATP-dependent RNA helicase DBP3; ... 82 3e-14
(Q86TM3) RecName: Full=Probable ATP-dependent RNA helicase DDX53... 82 4e-14
AE016853_4945(AE016853|pid:none) Pseudomonas syringae pv. tomato... 82 4e-14
AM236080_2595(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 82 4e-14
AM452053_1(AM452053|pid:none) Vitis vinifera contig VV78X242738.... 82 4e-14
(Q0UY62) RecName: Full=ATP-dependent RNA helicase DBP3; ... 82 4e-14
AE016853_1551(AE016853|pid:none) Pseudomonas syringae pv. tomato... 82 4e-14
AB193324_1(AB193324|pid:none) Daphnia magna vasa mRNA for VASA R... 82 4e-14
AC144484_19(AC144484|pid:none) Medicago truncatula clone mth2-30... 82 4e-14
(Q6BU54) RecName: Full=ATP-dependent RNA helicase DED1; ... 82 4e-14
BC051703_1(BC051703|pid:none) Homo sapiens DEAD (Asp-Glu-Ala-Asp... 82 4e-14
EF165011_1(EF165011|pid:none) Paragonimus westermani VASA2n (vas... 82 4e-14
CP001087_2288(CP001087|pid:none) Desulfobacterium autotrophicum ... 82 4e-14
AB208983_1(AB208983|pid:none) Homo sapiens mRNA for DEAD/H (Asp-... 82 5e-14
CP001330_157(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 82 5e-14
CP000472_4012(CP000472|pid:none) Shewanella piezotolerans WP3, c... 82 5e-14
(Q54KG1) RecName: Full=Probable ATP-dependent RNA helicase ddx41... 82 5e-14
CP000083_36(CP000083|pid:none) Colwellia psychrerythraea 34H, co... 82 5e-14
AB168192_1(AB168192|pid:none) Macaca fascicularis testis cDNA cl... 82 5e-14
CU928167_331(CU928167|pid:none) Kluyveromyces thermotolerans str... 82 5e-14
AK304689_1(AK304689|pid:none) Homo sapiens cDNA FLJ60399 complet... 82 5e-14
(Q5KNF8) RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helic... 82 5e-14
FM178379_1312(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ... 82 5e-14
CP000903_5122(CP000903|pid:none) Bacillus weihenstephanensis KBA... 82 5e-14
AY776161_1(AY776161|pid:none) Homo sapiens clone Ctg007 unknown ... 82 5e-14
BX897699_634(BX897699|pid:none) Bartonella henselae strain Houst... 82 5e-14
AB451220_1(AB451220|pid:none) Homo sapiens DDX3X mRNA for ATP-de... 82 5e-14
BC172016_1(BC172016|pid:none) Mus musculus DEAD/H (Asp-Glu-Ala-A... 81 7e-14
CR954217_242(CR954217|pid:none) Ostreococcus tauri strain OTTH05... 81 7e-14
CP000124_904(CP000124|pid:none) Burkholderia pseudomallei 1710b ... 81 7e-14
AB080116_1(AB080116|pid:none) Mesocricetus auratus DBX mRNA for ... 81 7e-14
CP001562_653(CP001562|pid:none) Bartonella grahamii as4aup, comp... 81 7e-14
BC044972_1(BC044972|pid:none) Xenopus laevis pl10, mRNA (cDNA cl... 81 7e-14
(A3LQ01) RecName: Full=ATP-dependent RNA helicase DED1; ... 81 7e-14
BX571965_705(BX571965|pid:none) Burkholderia pseudomallei strain... 81 7e-14
CP001328_226(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 81 7e-14
CT573326_3659(CT573326|pid:none) Pseudomonas entomophila str. L4... 81 7e-14
CP000821_3327(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 81 7e-14
CP000248_1287(CP000248|pid:none) Novosphingobium aromaticivorans... 81 7e-14
Y12819_1(Y12819|pid:none) Danio rerio p110a mRNA for putative RN... 81 7e-14
CP000926_4013(CP000926|pid:none) Pseudomonas putida GB-1, comple... 81 7e-14
CT005269_41(CT005269|pid:none) Leishmania major strain Friedlin,... 81 7e-14
EU448254_1(EU448254|pid:none) Salvelinus leucomaenis vasa mRNA, ... 81 9e-14
CT005266_214(CT005266|pid:none) Leishmania major strain Friedlin... 81 9e-14
BC133162_1(BC133162|pid:none) Danio rerio DEAD (Asp-Glu-Ala-Asp)... 81 9e-14
CP001157_346(CP001157|pid:none) Azotobacter vinelandii DJ, compl... 81 9e-14
CR954208_359(CR954208|pid:none) Ostreococcus tauri strain OTTH05... 81 9e-14
A97581(A97581) ATP-dependent RNA helicase rhle VCA0204 [imported... 81 9e-14
CP000094_1436(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 81 9e-14
AE015451_4472(AE015451|pid:none) Pseudomonas putida KT2440 compl... 81 9e-14
CP000712_4796(CP000712|pid:none) Pseudomonas putida F1, complete... 81 9e-14
CP000712_1359(CP000712|pid:none) Pseudomonas putida F1, complete... 81 9e-14
AB193327_2(AB193327|pid:none) Daphnia magna nrk, vasa genes for ... 81 9e-14
AM502226_8(AM502226|pid:none) Leishmania infantum chromosome 8. 80 1e-13
FN357833_7(FN357833|pid:none) Schistosoma mansoni genome sequenc... 80 1e-13
AE014185_306(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 80 1e-13
CP000708_862(CP000708|pid:none) Brucella ovis ATCC 25840 chromos... 80 1e-13
FJ526999_1(FJ526999|pid:none) Callithrix jacchus DEAD (Asp-Glu-A... 80 1e-13
CP000075_458(CP000075|pid:none) Pseudomonas syringae pv. syringa... 80 1e-13
AE014291_910(AE014291|pid:none) Brucella suis 1330 chromosome I,... 80 1e-13
(O13370) RecName: Full=ATP-dependent RNA helicase ded1; ... 80 1e-13
AY809916_1(AY809916|pid:none) Schistosoma japonicum SJCHGC01053 ... 80 1e-13
CP000949_484(CP000949|pid:none) Pseudomonas putida W619, complet... 80 1e-13
AE008917_1034(AE008917|pid:none) Brucella melitensis 16M chromos... 80 1e-13
CP000592_44(CP000592|pid:none) Ostreococcus lucimarinus CCE9901 ... 80 1e-13
CU928173_139(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 80 1e-13
AM181176_4429(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 80 1e-13
CP000438_447(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA1... 80 2e-13
CU928173_118(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 80 2e-13
CP000596_235(CP000596|pid:none) Ostreococcus lucimarinus CCE9901... 80 2e-13
(Q86IZ9) RecName: Full=Probable ATP-dependent RNA helicase ddx52... 80 2e-13
CP000958_2678(CP000958|pid:none) Burkholderia cenocepacia MC0-3 ... 80 2e-13
AM747720_934(AM747720|pid:none) Burkholderia cenocepacia J2315 c... 80 2e-13
CP000378_2044(CP000378|pid:none) Burkholderia cenocepacia AU 105... 80 2e-13
CP001191_1895(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 80 2e-13
AF510054_1(AF510054|pid:none) Schistocerca gregaria vasa-like ge... 80 2e-13
CP000614_2745(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 80 2e-13
(Q6CT49) RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helic... 80 2e-13
CP000151_2809(CP000151|pid:none) Burkholderia sp. 383 chromosome... 80 2e-13
AE004091_429(AE004091|pid:none) Pseudomonas aeruginosa PAO1, com... 80 2e-13
AB017003_1(AB017003|pid:none) Dugesia japonica mRNA for DjVLGB, ... 80 2e-13
AF479824_1(AF479824|pid:none) Melanotaenia fluviatilis DEAD box ... 80 2e-13
AM398681_1649(AM398681|pid:none) Flavobacterium psychrophilum JI... 80 2e-13
AB047382_1(AB047382|pid:none) Hydra magnipapillata mRNA for vasa... 80 2e-13
AF479822_1(AF479822|pid:none) Oryzias latipes DEAD box RNA helic... 80 2e-13
(P27639) RecName: Full=Eukaryotic initiation factor 4A; ... 80 2e-13
EU957034_1(EU957034|pid:none) Zea mays clone 1581050 ATP-depende... 80 2e-13
AB063484_1(AB063484|pid:none) Oryzias latipes olvas mRNA for VAS... 80 2e-13
(A5DZE6) RecName: Full=ATP-dependent RNA helicase DED1; ... 80 2e-13
EF206693_1(EF206693|pid:none) Fenneropenaeus chinensis VASA mRNA... 80 2e-13
AE002098_1360(AE002098|pid:none) Neisseria meningitidis MC58, co... 79 3e-13
AY437485_1(AY437485|pid:none) Leishmania major Hel61 gene, compl... 79 3e-13
CP001229_1425(CP001229|pid:none) Sulfurihydrogenibium azorense A... 79 3e-13
AE005674_747(AE005674|pid:none) Shigella flexneri 2a str. 301, c... 79 3e-13
CP000381_1273(CP000381|pid:none) Neisseria meningitidis 053442, ... 79 3e-13
AB047385_1(AB047385|pid:none) Ephydatia fluviatilis mRNA for Vas... 79 3e-13
CP001068_2376(CP001068|pid:none) Ralstonia pickettii 12J chromos... 79 3e-13
CP000036_625(CP000036|pid:none) Shigella boydii Sb227, complete ... 79 3e-13
CP001277_275(CP001277|pid:none) Candidatus Hamiltonella defensa ... 79 3e-13
AP009385_2578(AP009385|pid:none) Burkholderia multivorans ATCC 1... 79 3e-13
CP000076_5708(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 79 4e-13
AB032566_1(AB032566|pid:none) Oncorhynchus mykiss vas mRNA for V... 79 4e-13
AP007255_1385(AP007255|pid:none) Magnetospirillum magneticum AMB... 79 4e-13
AL939125_170(AL939125|pid:none) Streptomyces coelicolor A3(2) co... 79 4e-13
AE004969_134(AE004969|pid:none) Neisseria gonorrhoeae FA 1090, c... 79 4e-13
CP000563_3406(CP000563|pid:none) Shewanella baltica OS155, compl... 79 4e-13
AF479825_1(AF479825|pid:none) Oncorhynchus mykiss DEAD box RNA h... 79 4e-13
AL646052_2209(AL646052|pid:none) Ralstonia solanacearum GMI1000 ... 79 4e-13
BX936398_1651(BX936398|pid:none) Yersinia pseudotuberculosis IP3... 79 4e-13
AJ010592_111(AJ010592|pid:none) Guillardia theta DNA for complet... 79 4e-13
CP000742_1606(CP000742|pid:none) Methanococcus vannielii SB, com... 79 4e-13
CP000390_1762(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 79 4e-13
CP000851_917(CP000851|pid:none) Shewanella pealeana ATCC 700345,... 79 4e-13
CP000926_4997(CP000926|pid:none) Pseudomonas putida GB-1, comple... 79 4e-13
CU928158_2223(CU928158|pid:none) Escherichia fergusonii ATCC 354... 79 5e-13
CP000555_2082(CP000555|pid:none) Methylibium petroleiphilum PM1,... 79 5e-13
AE017220_817(AE017220|pid:none) Salmonella enterica subsp. enter... 79 5e-13
(A7TK63) RecName: Full=ATP-dependent RNA helicase DBP8; ... 79 5e-13
CP000970_783(CP000970|pid:none) Escherichia coli SMS-3-5, comple... 79 5e-13
CP000931_3557(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 79 5e-13
AM181176_5603(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 79 5e-13
AP009153_3744(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 79 5e-13
CP000822_2273(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 79 5e-13
CP000243_774(CP000243|pid:none) Escherichia coli UTI89, complete... 79 5e-13
(Q4P184) RecName: Full=ATP-dependent RNA helicase FAL1; ... 79 5e-13
CP000094_5278(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 79 5e-13
AE014075_853(AE014075|pid:none) Escherichia coli CFT073, complet... 79 5e-13
FP236842_2383(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 79 5e-13
AE005174_868(AE005174|pid:none) Escherichia coli O157:H7 EDL933,... 79 5e-13
CP000038_726(CP000038|pid:none) Shigella sonnei Ss046, complete ... 79 5e-13
CP000753_851(CP000753|pid:none) Shewanella baltica OS185, comple... 79 5e-13
AB265785_1(AB265785|pid:none) Neobenedenia girellae Ngvlg1 mRNA ... 79 5e-13
CU928164_768(CU928164|pid:none) Escherichia coli IAI39 chromosom... 79 5e-13
FM955429_1(FM955429|pid:none) Haemonchus contortus partial mRNA ... 79 5e-13
CP000802_805(CP000802|pid:none) Escherichia coli HS, complete ge... 79 5e-13
CP000034_749(CP000034|pid:none) Shigella dysenteriae Sd197, comp... 79 5e-13
BX950229_457(BX950229|pid:none) Methanococcus maripaludis strain... 79 5e-13
(A7TEF4) RecName: Full=ATP-dependent RNA helicase FAL1; ... 78 6e-13
AE014291_1019(AE014291|pid:none) Brucella suis 1330 chromosome I... 78 6e-13
CU468135_2251(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 78 6e-13
FN317788_1(FN317788|pid:none) Schistosoma japonicum isolate Anhu... 78 6e-13
CP001025_2569(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 78 6e-13
CP000851_3482(CP000851|pid:none) Shewanella pealeana ATCC 700345... 78 6e-13
CP001133_558(CP001133|pid:none) Vibrio fischeri MJ11 chromosome ... 78 6e-13
CP000316_3461(CP000316|pid:none) Polaromonas sp. JS666, complete... 78 6e-13
CP000911_1042(CP000911|pid:none) Brucella suis ATCC 23445 chromo... 78 6e-13
EF165012_1(EF165012|pid:none) Paragonimus westermani VASA3n (vas... 78 6e-13
AB265787_1(AB265787|pid:none) Neobenedenia girellae Ngvlg3 mRNA ... 78 6e-13
CP000440_2713(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 78 6e-13
AE017223_982(AE017223|pid:none) Brucella abortus biovar 1 str. 9... 78 6e-13
CP000103_2635(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 78 6e-13
AK133545_1(AK133545|pid:none) Mus musculus adult male xiphoid ca... 78 6e-13
(Q8K301) RecName: Full=Probable ATP-dependent RNA helicase DDX52... 78 6e-13
AM286415_1699(AM286415|pid:none) Yersinia enterocolitica subsp. ... 78 6e-13
CP000708_937(CP000708|pid:none) Brucella ovis ATCC 25840 chromos... 78 6e-13
AP009153_2770(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 78 6e-13
CP000282_3192(CP000282|pid:none) Saccharophagus degradans 2-40, ... 78 8e-13
(Q5K5B6) RecName: Full=DEAD-box ATP-dependent RNA helicase 57; ... 78 8e-13
T19974(T19974) hypothetical protein C46F11.4 - Caenorhabditis el... 78 8e-13
CU207211_422(CU207211|pid:none) Herminiimonas arsenicoxydans chr... 78 8e-13
CP000388_2314(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 78 8e-13
CP000774_3234(CP000774|pid:none) Parvibaculum lavamentivorans DS... 78 8e-13
CP000790_1195(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 77 1e-12
CP000503_833(CP000503|pid:none) Shewanella sp. W3-18-1, complete... 77 1e-12
BX640434_6(BX640434|pid:none) Bordetella parapertussis strain 12... 77 1e-12
AB032467_1(AB032467|pid:none) Oreochromis niloticus mRNA for vas... 77 1e-12
AM260479_2644(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 77 1e-12
CP000142_640(CP000142|pid:none) Pelobacter carbinolicus DSM 2380... 77 1e-12
CP000720_2315(CP000720|pid:none) Yersinia pseudotuberculosis IP ... 77 1e-12
AE016825_1003(AE016825|pid:none) Chromobacterium violaceum ATCC ... 77 1e-12
(Q5KDK3) RecName: Full=ATP-dependent RNA helicase ROK1; ... 77 1e-12
CP000927_2735(CP000927|pid:none) Caulobacter sp. K31, complete g... 77 1e-12
AL939121_32(AL939121|pid:none) Streptomyces coelicolor A3(2) com... 77 1e-12
CP000546_2332(CP000546|pid:none) Burkholderia mallei NCTC 10229 ... 77 1e-12
AE016828_581(AE016828|pid:none) Coxiella burnetii RSA 493, compl... 77 1e-12
GQ140633_1(GQ140633|pid:none) Ctenopharyngodon idella vasa mRNA,... 77 1e-12
CR940348_677(CR940348|pid:none) Theileria annulata strain Ankara... 77 1e-12
AY773078_1(AY773078|pid:none) Carassius auratus gibelio Vasa (va... 77 1e-12
AM902716_925(AM902716|pid:none) Bordetella petrii strain DSM 128... 77 1e-12
CP000058_438(CP000058|pid:none) Pseudomonas syringae pv. phaseol... 77 1e-12
CP000886_2620(CP000886|pid:none) Salmonella enterica subsp. ente... 77 1e-12
CP000444_2870(CP000444|pid:none) Shewanella sp. MR-7, complete g... 77 1e-12
FJ441603_1(FJ441603|pid:none) Halocynthia roretzi vasa mRNA, com... 77 1e-12
CP000053_264(CP000053|pid:none) Rickettsia felis URRWXCal2, comp... 77 1e-12
AB016604_1(AB016604|pid:none) Ciona intestinalis CIDEAD1a mRNA f... 77 1e-12
AE006468_793(AE006468|pid:none) Salmonella enterica subsp. enter... 77 1e-12
CP001052_3249(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 77 1e-12
CP000744_1649(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 77 1e-12
AE014613_1943(AE014613|pid:none) Salmonella enterica subsp. ente... 77 1e-12
CP000390_1414(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 77 1e-12
(Q3MSQ8) RecName: Full=Probable ATP-dependent RNA helicase DDX4;... 77 1e-12
CP001154_2532(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 77 1e-12
(A5DU73) RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helic... 77 1e-12
CP000821_1020(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 77 1e-12
AM260479_529(AM260479|pid:none) Ralstonia eutropha H16 chromosom... 77 1e-12
A83213(A83213) probable ATP-dependent RNA helicase PA3466 [impor... 77 1e-12
AK080767_1(AK080767|pid:none) Mus musculus adult retina cDNA, RI... 77 1e-12
AF479823_1(AF479823|pid:none) Pantodon buchholzi DEAD box RNA he... 77 1e-12

>AC115598_49(AC115598|pid:none) Dictyostelium discoideum chromosome 2
map 581427-735498 strain AX4, complete sequence.
Length = 1151

Score = 389 bits (998), Expect(2) = 0.0
Identities = 195/209 (93%), Positives = 195/209 (93%)
Frame = +1

Query: 1 IEQFVEVRPTETRFRRLIELLSIWYHKGQILIFTNRQETTDNLYRQLSNSQYQCLSLHGS 180
IEQFVEVRPTETRFRRLIELLSIWYHKGQILIFTNRQETTDNLYRQLSNSQYQCLSLHGS
Sbjct: 730 IEQFVEVRPTETRFRRLIELLSIWYHKGQILIFTNRQETTDNLYRQLSNSQYQCLSLHGS 789

Query: 181 KDQTDRDETISDFKNKVKTILIATPLASRGLDIKDLNLVVNFDCPDHLEDYVHXXXXXXX 360
KDQTDRDETISDFKNKVKTILIATPLASRGLDIKDLNLVVNFDCPDHLEDYVH
Sbjct: 790 KDQTDRDETISDFKNKVKTILIATPLASRGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGR 849

Query: 361 XXXXXXXYTFITPDEERFSSSIIKALEQSGSKVPDELRKLNDTYEKKRKEGKDVLLAPTG 540
YTFITPDEERFSSSIIKALEQSGSKVPDELRKLNDTYEKKRKEGKDVLLAPTG
Sbjct: 850 AGNRGTAYTFITPDEERFSSSIIKALEQSGSKVPDELRKLNDTYEKKRKEGKDVLLAPTG 909

Query: 541 FTGRGHKFDAAEEDKKNIERKQQRKAYGI 627
FTGRGHKFDAAEEDKKNIERKQQRKAYGI
Sbjct: 910 FTGRGHKFDAAEEDKKNIERKQQRKAYGI 938

Score = 311 bits (797), Expect(2) = 0.0
Identities = 160/176 (90%), Positives = 160/176 (90%)
Frame = +3

Query: 738 DPATTNTIVIPGVDGTIITPSSLLQTDPSVPVGQQAINQIFGISQVTSSEEAIKKLQLAA 917
DPATTNTIVIPGVDGTIITPSSLLQTDPSVPVGQQAINQIFGISQVTSSEEAIKKLQLAA
Sbjct: 976 DPATTNTIVIPGVDGTIITPSSLLQTDPSVPVGQQAINQIFGISQVTSSEEAIKKLQLAA 1035

Query: 918 QLGMKGNIQKLNNQITPLNQTHFIEELEINDYSQQARWKVTHKDALLEXXXXXXXXXXXX 1097
QLGMKGNIQKLNNQITPLNQTHFIEELEINDYSQQARWKVTHKDALLE
Sbjct: 1036 QLGMKGNIQKLNNQITPLNQTHFIEELEINDYSQQARWKVTHKDALLEITNFPNTTITTK 1095

Query: 1098 XXXXPPNKIPAPGERKLYLYIEGPSDASVKNAKSDIKKILDEVQSTHQSTGKYSVF 1265
PPNKIPAPGERKLYLYIEGPSDASVKNAKSDIKKILDEVQSTHQSTGKYSVF
Sbjct: 1096 GTFFPPNKIPAPGERKLYLYIEGPSDASVKNAKSDIKKILDEVQSTHQSTGKYSVF 1151

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,788,154,284
Number of extensions: 32877804
Number of successful extensions: 101960
Number of sequences better than 10.0: 3999
Number of HSP's gapped: 101716
Number of HSP's successfully gapped: 4050
Length of query: 427
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 296
Effective length of database: 627,191,635
Effective search space: 185648723960
Effective search space used: 185648723960
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.29 alm: 0.39 top: 0.53 tms: 0.00 mit: 0.24 mip: 0.00
nuc: 0.04 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

52.0 %: cytoplasmic
16.0 %: cytoskeletal
16.0 %: nuclear
4.0 %: extracellular, including cell wall
4.0 %: vacuolar
4.0 %: mitochondrial
4.0 %: plasma membrane

>> prediction for Contig-U12181-1 is cyt

VS (DIR, S) 0
VH (FL, L) 1
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 3
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0