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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U12144-1
Contig ID Contig-U12144-1
Contig update 2002.12.18
Contig sequence 
>Contig-U12144-1 (Contig-U12144-1Q) /CSM_Contig/Contig-U12144-1Q.Seq.d
CCCACGCGTCCGATTACATAAAAAACAAAAAAAAAAAAAAAAACAAACCA
AGTTAACCAATAAAAAATATAATAAAAATAATAAATTTAATATATAAAAA
AAAAAATAATAACTATAGTCAAATATAATAAATATTAATAAATAATAAAA
ATAATAATAATATATAAANATTAACCCATTATATATTAATATATAATAAA
TATAT----------TCAATATCATAATATGCAACAACAACAACTGCAAC
AAGCACAACAACAAGCACAACAACAAGCACAACAACAACAACAACAACAA
ACTCAACAACCACAACCACAACCACCACAACAACCACTACAACAACCACC
ACAACAACAACAACCACCACAACCACAAGTTAATACTAGCACAACCAATG
TAAATACTACTGTACAACCAACAACAACTACTACTACAACTCAACCTACT
TCGACTTCTGCCTCATCAACATCAGCAACATCATCATCAAATTTAAATAA
TGCACGTACTACAAGCCAACAATCATTGGGTAGTGCTCCAACCACAGGTA
AAGGAAGGGGACGATCATCTTTTGGAAATTGCAAAAGTCAATAAGATATT
TTAATCATGTTCCTTTTTACTGTTATTTATTTTCCCATAAAAAAA
Gap gap included
Contig length 635
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 3142016
End point 3142641
Strand (PLUS/MINUS) PLUS
Number of clones 4
Number of EST 5
Link to clone list U12144
List of clone(s) 

est1=SLC839F,1,206
est2=SLC839Z,207,637
est3=CFE170Z,317,585
est4=CFD635Z,329,584
est5=SLJ881E,435,632
Translated Amino Acid sequence 
hasdyiknkkkkknkps*pikniikiinliykkknnnysqi**ilinnknnnni*XLTHY
ILIYNKY---

---QYHNMQQQQLQQAQQQAQQQAQQQQQQQTQQPQPQPPQQPLQQPPQQQQPPQPQVNT
STTNVNTTVQPTTTTTTTQPTSTSASSTSATSSSNLNNARTTSQQSLGSAPTTGKGRGRS
SFGNCKSQ*dilimflftviyfpikk
Translated Amino Acid sequence (All Frames) 
Frame A:
ptrpit*ktkkkkktnqvnq*ki**k**i*yikkkiitivkynky**iikiiiiykx*pi
iy*yiini---

---sis*yattttatstttstttstttttttnstttttttttttttttttttttttts*y
*hnqckyycttnnnyyynstyfdfclinisniiikfk*ctyykptiig*csnhr*rkgti
ifwklqksiryfnhvpfycylfshkk

Frame B:
prvrlhkkqkkkkkqtkltnkkynknnkfni*kkk**l*sniinink**k***yixinpl
yini**iy---

---QYHNMQQQQLQQAQQQAQQQAQQQQQQQTQQPQPQPPQQPLQQPPQQQQPPQPQVNT
STTNVNTTVQPTTTTTTTQPTSTSASSTSATSSSNLNNARTTSQQSLGSAPTTGKGRGRS
SFGNCKSQ*dilimflftviyfpikk

Frame C:
hasdyiknkkkkknkps*pikniikiinliykkknnnysqi**ilinnknnnni*XLTHY
ILIYNKY---

---niiicnnnncnkhnnkhnnkhnnnnnnklnnhnhnhhnnhynnhhnnnnhhnhklil
aqpm*illynqqqlllqlnllrllphqhqqhhhqi*imhvlqannhwvvlqpqvkegddh
lleiakvnkif*scsflllfifp*k
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U12144-1 (Contig-U12144-1Q)
/CSM_Contig/Contig-U12144-1Q.Seq.d
         (645 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U12144-1 (Contig-U12144-1Q) /CSM_Contig/Conti...   515  e-146
Contig-U09392-1 (Contig-U09392-1Q) /CSM_Contig/Conti...    52  8e-07
Contig-U12645-1 (Contig-U12645-1Q) /CSM_Contig/Conti...    48  1e-05
Contig-U12497-1 (Contig-U12497-1Q) /CSM_Contig/Conti...    46  5e-05
Contig-U11064-1 (Contig-U11064-1Q) /CSM_Contig/Conti...    46  5e-05
Contig-U04608-1 (Contig-U04608-1Q) /CSM_Contig/Conti...    46  5e-05
Contig-U12755-1 (Contig-U12755-1Q) /CSM_Contig/Conti...    42  7e-04
Contig-U12722-1 (Contig-U12722-1Q) /CSM_Contig/Conti...    42  7e-04
Contig-U12504-1 (Contig-U12504-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U12094-1 (Contig-U12094-1Q) /CSM_Contig/Conti...    40  0.003

>Contig-U12144-1 (Contig-U12144-1Q) /CSM_Contig/Contig-U12144-1Q.Seq.d
          Length = 645

 Score =  515 bits (260), Expect = e-146
 Identities = 260/260 (100%)
 Strand = Plus / Plus

                                                                       
Query: 379 gttaatactagcacaaccaatgtaaatactactgtacaaccaacaacaactactactaca 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gttaatactagcacaaccaatgtaaatactactgtacaaccaacaacaactactactaca 438

                                                                       
Query: 439 actcaacctacttcgacttctgcctcatcaacatcagcaacatcatcatcaaatttaaat 498
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 actcaacctacttcgacttctgcctcatcaacatcagcaacatcatcatcaaatttaaat 498

                                                                       
Query: 499 aatgcacgtactacaagccaacaatcattgggtagtgctccaaccacaggtaaaggaagg 558
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aatgcacgtactacaagccaacaatcattgggtagtgctccaaccacaggtaaaggaagg 558

                                                                       
Query: 559 ggacgatcatcttttggaaattgcaaaagtcaataagatattttaatcatgttccttttt 618
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ggacgatcatcttttggaaattgcaaaagtcaataagatattttaatcatgttccttttt 618

                               
Query: 619 actgttatttattttcccat 638
           ||||||||||||||||||||
Sbjct: 619 actgttatttattttcccat 638


 Score = 38.2 bits (19), Expect = 0.011
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 1  cccacgcgtccgattacat 19
          |||||||||||||||||||
Sbjct: 1  cccacgcgtccgattacat 19


 Score = 30.2 bits (15), Expect = 2.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                         
Query: 44 caaaccaagttaacc 58
          |||||||||||||||
Sbjct: 44 caaaccaagttaacc 58


>Contig-U09392-1 (Contig-U09392-1Q) /CSM_Contig/Contig-U09392-1Q.Seq.d
          Length = 1696

 Score = 52.0 bits (26), Expect = 8e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 409 actgtacaaccaacaacaactactactaca 438
           ||||||| ||||||||||||||||||||||
Sbjct: 922 actgtaccaccaacaacaactactactaca 951


>Contig-U12645-1 (Contig-U12645-1Q) /CSM_Contig/Contig-U12645-1Q.Seq.d
          Length = 838

 Score = 48.1 bits (24), Expect = 1e-05
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 405 tactactgtacaaccaacaacaactactactacaac 440
           |||||||||| |||||||| |||| |||||||||||
Sbjct: 290 tactactgtagaaccaacaccaacaactactacaac 325


 Score = 38.2 bits (19), Expect = 0.011
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 419 caacaacaactactactac 437
           |||||||||||||||||||
Sbjct: 322 caacaacaactactactac 340


 Score = 36.2 bits (18), Expect = 0.045
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 419 caacaacaactactactacaac 440
           ||||||| ||||||||||||||
Sbjct: 325 caacaactactactactacaac 346


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7508
Number of Sequences: 6905
Number of extensions: 7508
Number of successful extensions: 1143
Number of sequences better than 10.0: 259
length of query: 645
length of database: 5,674,871
effective HSP length: 16
effective length of query: 629
effective length of database: 5,564,391
effective search space: 3500001939
effective search space used: 3500001939
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.29
Homology vs DNA 
Query= Contig-U12144-1 (Contig-U12144-1Q) /CSM_Contig/Contig-U12144-1Q.Seq.d
         (645 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU053893) Dictyostelium discoideum slug cDNA, clone SLJ881.      373   5e-99  1
(AU034412) Dictyostelium discoideum slug cDNA, clone SLC839.      359   4e-96  2
(BJ374514) Dictyostelium discoideum cDNA clone:ddc8e10, 3' e...   230   2e-62  2
(BJ374653) Dictyostelium discoideum cDNA clone:ddc9k17, 3' e...   230   1e-60  2
(AC115895) Mus musculus chromosome 5, clone RP24-443E20, com...    50   0.099  1
(AC181018) Strongylocentrotus purpuratus clone R3-3056D04, W...    50   0.099  1
(AC179228) Strongylocentrotus purpuratus clone R3-1106O16, W...    50   0.099  1
(AC177031) Strongylocentrotus purpuratus clone R3-38B23, WOR...    50   0.099  1
(CK271792) EST717870 potato abiotic stress cDNA library Sola...    50   0.099  1
(BQ507117) EST614532 Generation of a set of potato cDNA clon...    50   0.099  1
(BQ118156) EST603732 mixed potato tissues Solanum tuberosum ...    50   0.099  1
(BQ047554) EST596672 P. infestans-challenged potato leaf, in...    50   0.099  1
(BG886649) EST512500 cSTD Solanum tuberosum cDNA clone cSTD1...    50   0.099  1
(BG597095) EST495773 cSTS Solanum tuberosum cDNA clone cSTS1...    50   0.099  1
(BE343842) EST409004 potato stolon, Cornell University Solan...    50   0.099  1
(FK862285) 00000982173N01 D. serrata mRNA from different dev...    50   0.099  1
(AC158555) Mus musculus chromosome 3, clone RP23-14B10, comp...    48   0.39   1
(AC102418) Mus musculus chromosome 3, clone RP24-499L10, com...    48   0.39   1
(AY395061) Schistosoma mansoni thyroid hormone receptor alph...    48   0.39   1
(AY395038) Schistosoma mansoni thyroid hormone receptor alph...    48   0.39   1
(AC119697) Rattus norvegicus clone CH230-135B13, WORKING DRA...    48   0.39   1
(AC180826) Strongylocentrotus purpuratus clone R3-3071D03, W...    48   0.39   1
(AC180333) Strongylocentrotus purpuratus clone R3-3118K19, W...    48   0.39   1
(AC176744) Strongylocentrotus purpuratus clone R3-3097F16, W...    48   0.39   1
(AC176708) Strongylocentrotus purpuratus clone R3-112A11, WO...    48   0.39   1
(EI025653) bb27d10.r Dekkera bruxellensis Random Genomic Lib...    48   0.39   1
(CZ284343) cp35a03.f Candida parapsilosis Random Genomic Lib...    48   0.39   1
(AG169934) Pan troglodytes DNA, clone: RP43-038M03.TJ.             48   0.39   1
(EH296177) UAHYP_02D_F_G01 UaHyphae_ARS Uromyces appendicula...    48   0.39   1
(EH296167) UAHYP_02D_R_G01 UaHyphae_ARS Uromyces appendicula...    48   0.39   1
(DY895401) CeleSEQ15222 Cunninghamella elegans pBluescript (...    48   0.39   1
(DT680610) s13dFA29A09DS069_79027 Tall fescue, Festuca arund...    48   0.39   1
(DT680533) s13dFA06A12DS097_78873 Tall fescue, Festuca arund...    48   0.39   1
(FE664696) UAHYP_22A_R_E04 UaHyphae_ARS Uromyces appendicula...    48   0.39   1
(FE664622) UAHYP_22A_F_E04 UaHyphae_ARS Uromyces appendicula...    48   0.39   1
(FD716680) CAAA2363.fwd CAAA Petromyzon marinus Petromyzon m...    48   0.39   1
(EY345742) CAWZ14245.fwd CAWZ Helobdella robusta Primary Lat...    48   0.39   1
(EY337188) CAWY8166.fwd CAWY Helobdella robusta Subtracted E...    48   0.39   1
(EY324738) CAWY10469.fwd CAWY Helobdella robusta Subtracted ...    48   0.39   1
(AC176103) Strongylocentrotus purpuratus clone R3-24F1, WORK...    46   0.64   2
(EB929964) 9924293 ZF31XL Danio rerio cDNA clone 3546911, mR...    34   0.67   3
(CR944667) Zebrafish DNA sequence from clone DKEY-238D18 in ...    46   1.5    1
(AC162178) Mus musculus BAC clone RP23-410H21 from chromosom...    46   1.5    1
(AC151769) Mus musculus BAC clone RP24-375O19 from chromosom...    46   1.5    1
(AC116578) Mus musculus BAC clone RP23-264P8 from 9, complet...    46   1.5    1
(AC034254) Mus musculus strain C57BL6/J chromosome 6 clone R...    46   1.5    1
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875...    46   1.5    1
(AC114261) Dictyostelium discoideum chromosome 2 map 126059-...    46   1.5    1
(AC149967) Strongylocentrotus purpuratus clone R3-32B2, WORK...    46   1.5    1
(AC146996) Arbacia punctulata clone BAP-38E10, WORKING DRAFT...    46   1.5    1
(AC119757) Rattus norvegicus clone CH230-418C11, WORKING DRA...    46   1.5    1
(AC102436) Mus musculus clone RP24-129I20, LOW-PASS SEQUENCE...    46   1.5    1
(AC229586) Zea mays chromosome 1 clone CH201-201K16; ZMMBBc0...    46   1.5    1
(AC226317) Zea mays chromosome 8 clone CH201-527F12; ZMMBBc0...    46   1.5    1
(AC225974) Monodelphis domestica clone VMRC18-95C11, WORKING...    46   1.5    1
(AC216725) Zea mays chromosome 5 clone CH201-170N6; ZMMBBc01...    46   1.5    1
(AC213880) Zea mays chromosome 4 clone CH201-465N3; ZMMBBc04...    46   1.5    1
(AC213099) Zea mays chromosome 1 clone CH201-188M9; ZMMBBc01...    46   1.5    1
(AC212078) Zea mays chromosome 2 clone CH201-544D4; ZMMBBc05...    46   1.5    1
(AC211929) Zea mays chromosome 9 clone CH201-11F4; ZMMBBc001...    46   1.5    1
(AC211639) Zea mays chromosome 1 clone CH201-545G6; ZMMBBc05...    46   1.5    1
(AC211351) Zea mays chromosome 9 clone CH201-180O16; ZMMBBc0...    46   1.5    1
(AC210738) Zea mays chromosome 3 clone CH201-259E17; ZMMBBc0...    46   1.5    1
(AC210075) Zea mays chromosome 9 clone ZMMBBb-351N20; ZMMBBb...    46   1.5    1
(AC210040) Zea mays chromosome 2 clone ZMMBBb-120D9; ZMMBBb0...    46   1.5    1
(AC208913) Zea mays chromosome 5 clone CH201-79A15; ZMMBBc00...    46   1.5    1
(AC208569) Zea mays chromosome 1 clone ZMMBBb-334G6; ZMMBBb0...    46   1.5    1
(AC208568) Zea mays chromosome 5 clone ZMMBBb-333C20; ZMMBBb...    46   1.5    1
(AC207625) Zea mays chromosome 5 clone CH201-124J16; ZMMBBc0...    46   1.5    1
(AC206306) Zea mays chromosome 5 clone CH201-56O2; ZMMBBc005...    46   1.5    1
(AC203888) Zea mays chromosome 2 clone CH201-114G21; ZMMBBc0...    46   1.5    1
(AC203272) Zea mays chromosome 9 clone ZMMBBb-481F10; ZMMBBb...    46   1.5    1
(AC203256) Zea mays chromosome 8 clone CH201-193C17; ZMMBBc0...    46   1.5    1
(AC202418) Zea mays chromosome 1 clone ZMMBBb-317A5; ZMMBBb0...    46   1.5    1
(AC201549) Strongylocentrotus purpuratus clone R3-3113H3, WO...    46   1.5    1
(AC201357) Strongylocentrotus purpuratus clone R3-17B15, WOR...    46   1.5    1
(AC201129) Strongylocentrotus purpuratus clone R3-14A21, WOR...    46   1.5    1
(AC200418) Zea mays chromosome 1 clone CH201-193L1; ZMMBBc01...    46   1.5    1
(AC197923) Zea mays chromosome 10 clone CH201-117M14; ZMMBBc...    46   1.5    1
(AC196971) Zea mays chromosome 4 clone CH201-306E13; ZMMBBc0...    46   1.5    1
(AC195364) Zea mays chromosome 8 clone CH201-217F10; ZMMBBc0...    46   1.5    1
(AC191084) Zea mays chromosome 8 clone CH201-337F7; ZMMBBc03...    46   1.5    1
(AC190490) Zea mays chromosome 2 clone ZMMBBb-238J14; ZMMBBb...    46   1.5    1
(AC187251) Zea mays chromosome 8 clone CH201-480F6; ZMMBBc04...    46   1.5    1
(AC187204) Zea mays chromosome 1 clone ZMMBBb-189I20; ZMMBBb...    46   1.5    1
(AC187158) Zea mays chromosome 6 clone CH201-241O1; ZMMBBc02...    46   1.5    1
(AC186306) Zea mays chromosome 1 clone CH201-226E21; ZMMBBc0...    46   1.5    1
(AC186304) Zea mays chromosome 1 clone CH201-198C21; ZMMBBc0...    46   1.5    1
(AC185219) Zea mays chromosome 4 clone ZMMBBb-487E23; ZMMBBb...    46   1.5    1
(AC185113) Zea mays chromosome 3 clone CH201-478E4; ZMMBBc04...    46   1.5    1
(AC184429) Strongylocentrotus purpuratus clone R3-3089I6, WO...    46   1.5    1
(AC182729) Petromyzon marinus chromosome UNK clone CH303-4_3...    46   1.5    1
(AC181942) Strongylocentrotus purpuratus clone R3-1009C18, W...    46   1.5    1
(AC181854) Strongylocentrotus purpuratus clone R3-1021L3, WO...    46   1.5    1
(AC181708) Strongylocentrotus purpuratus clone R3-24A17, WOR...    46   1.5    1
(AC180573) Strongylocentrotus purpuratus clone R3-3095M18, W...    46   1.5    1
(AC180209) Strongylocentrotus purpuratus clone R3-3C5, WORKI...    46   1.5    1
(AC180185) Strongylocentrotus purpuratus clone R3-4001P17, W...    46   1.5    1
(AC179155) Strongylocentrotus purpuratus clone R3-4012L9, WO...    46   1.5    1
(AC178981) Strongylocentrotus purpuratus clone R3-3122G2, WO...    46   1.5    1

>(AU053893) Dictyostelium discoideum slug cDNA, clone SLJ881.
          Length = 198

 Score =  373 bits (188), Expect = 5e-99
 Identities = 188/188 (100%)
 Strand = Plus / Plus


Query: 451 tcgacttctgcctcatcaacatcagcaacatcatcatcaaatttaaataatgcacgtact 510
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tcgacttctgcctcatcaacatcagcaacatcatcatcaaatttaaataatgcacgtact 67


Query: 511 acaagccaacaatcattgggtagtgctccaaccacaggtaaaggaaggggacgatcatct 570
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  acaagccaacaatcattgggtagtgctccaaccacaggtaaaggaaggggacgatcatct 127


Query: 571 tttggaaattgcaaaagtcaataagatattttaatcatgttcctttttactgttatttat 630
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 tttggaaattgcaaaagtcaataagatattttaatcatgttcctttttactgttatttat 187


Query: 631 tttcccat 638
           ||||||||
Sbjct: 188 tttcccat 195

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 280,266,203
Number of extensions: 21853646
Number of successful extensions: 1830608
Number of sequences better than 10.0: 241
Length of query: 645
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 622
Effective length of database: 93,106,754,628
Effective search space: 57912401378616
Effective search space used: 57912401378616
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7. 2
Homology vs Protein 
Query= Contig-U12144-1 (Contig-U12144-1Q) /CSM_Contig/Contig-U12144-1Q.Seq.d
         (645 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY691322_1(AY691322|pid:none) Ochlerotatus atropalpus vitellogen...    33   5.4

>AY691322_1(AY691322|pid:none) Ochlerotatus atropalpus vitellogenin
           C (Vg-C) gene, partial cds.
          Length = 1825

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +2

Query: 503 HVLQANNHWVVLQPQVKEGDDHLLEIAK 586
           +++QAN HWV  QPQ++E D +   +AK
Sbjct: 209 YIVQANKHWVP-QPQLRENDQYFFHVAK 235

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 408,916,467
Number of extensions: 5468306
Number of successful extensions: 8768
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8767
Number of HSP's successfully gapped: 1
Length of query: 215
Length of database: 1,051,180,864
Length adjustment: 123
Effective length of query: 92
Effective length of database: 653,084,107
Effective search space: 60083737844
Effective search space used: 60083737844
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
PSORT 

 psg: 0.75  gvh: 0.30  alm: 0.67  top: 0.53  tms: 0.00  mit: 0.84  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 76.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  8.0 %: cytoplasmic
	  8.0 %: nuclear

>> prediction for Contig-U12144-1 is mit
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 2
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 2
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0