>Contig-U12135-1 (Contig-U12135-1Q) /CSM_Contig/Contig-U12135-1Q.Seq.d
GGTAGTTGTCGATGTGGTGGAAGATGGTGTTGAACCAAACAATCCTGTTG
ATGGTGTTGTTGTTGCTGCTGTTGTTGTTGATGAGGAACCAAATGGTGTA
GCAGTAGTGGATGTTGTTGTTGAACCAAATAATCCTGTTGATGGAGCAGT
ATTGGAAGT----------ATCTACCGCCGCTACTACCACACNTTCTTTT
GGATCATCACCATTTGGAGCACCATCATCTACATCTTCAACTCCATTTGG
AGCATCACCATTTGGAGCACCAACATCTACATCCTCACCTCCATTTGGAG
CACCAACATCTGCATCCTCAACTCCATTTGGAGCACCACAAATTTCAACC
TCAAGTTCGACTAATCTTTTTGGAGGAGCATCATCTTCAACCGCTGCACC
ATCATTCGTCTCTTCACCATTTGGAGCACCAATAACCTCATCATCATCAT
CGTCATCATCATCATTACCATTTGGAGCACCAACTACTTCATCCTCATCC
TCAACTCCATTTGGTGCATCACCTTTTGGAAATTCAATGGCTTCAACTAC
ATCACCATTTGGAGCACCTGCAGCTTCACCTTCACCATTTGGAATACAGG
CAGCCTCACCCTCTCCATTTGGAGCACCAGCAGCCTCACCTTCACCATTT
GGTTCAACCCCATCCACTGCACCAAATCCATTTGGTAATTTTGGCGCCGT
GCCTGCAAATGGTTTTTCACTTGGTAAAATGGGAACAAGTAAAAAACCCG
CAAAAAAGAAATAATAAAAAAATATTAATAGTAATTATTTAATATTTAGT
ATTTAAAAAAATTAAAATAAAAAAAAAAACAGAAAAATAAACTTTTTTGT
ATTATATAACTTTTTTAAAAGAAAAAAAA

est1=SLC134F,1,160
est2=VHL589Z,161,762
est3=VFK878Z,201,871
est4=VHE278Z,201,765
est5=SLC134Z,281,829

VVVDVVEDGVEPNNPVDGVVVAAVVVDEEPNGVAVVDVVVEPNNPVDGAVLE---

---STAATTTXSFGSSPFGAPSSTSSTPFGASPFGAPTSTSSPPFGAPTSASSTPFGAPQ
ISTSSSTNLFGGASSSTAAPSFVSSPFGAPITSSSSSSSSSLPFGAPTTSSSSSTPFGAS
PFGNSMASTTSPFGAPAASPSPFGIQAASPSPFGAPAASPSPFGSTPSTAPNPFGNFGAV
PANGFSLGKMGTSKKPAKKK**kninsnylifsi*kn*nkkknrkinffvlynffkrkk

Frame A:
gscrcggrwc*tkqsc*wcccccccc**gtkwcsssgccc*tk*sc*wssigs---

---iyrryyhtffwiitiwstiiyifnsiwsitiwstniyiltsiwstnicilnsiwstt
nfnlkfd*sfwrsiifnrctiirlftiwstnnliiiiviiiitiwstnyfililnsiwci
tfwkfngfnyitiwstcsftftiwntgsltlsiwstssltftiwfnpihctksiw*fwrr
ackwfftw*ngnk*ktrkkeiikky***lfni*ylkklk*kkkqknklfcii*lf*kkk

Frame B:
VVVDVVEDGVEPNNPVDGVVVAAVVVDEEPNGVAVVDVVVEPNNPVDGAVLE---

---STAATTTXSFGSSPFGAPSSTSSTPFGASPFGAPTSTSSPPFGAPTSASSTPFGAPQ
ISTSSSTNLFGGASSSTAAPSFVSSPFGAPITSSSSSSSSSLPFGAPTTSSSSSTPFGAS
PFGNSMASTTSPFGAPAASPSPFGIQAASPSPFGAPAASPSPFGSTPSTAPNPFGNFGAV
PANGFSLGKMGTSKKPAKKK**kninsnylifsi*kn*nkkknrkinffvlynffkrkk

Frame C:
*lsmwwkmvlnqtillmvllllllllmrnqmv*q*wmlllnqiillmeqywk---

---lppllphxlldhhhlehhhlhlqlhlehhhlehqhlhphlhlehqhlhpqlhlehhk
fqpqvrlifleehhlqplhhhsslhhlehq*phhhhrhhhhyhlehqllhphpqlhlvhh
lleiqwlqlhhhlehlqlhlhhleyrqphplhlehqqphlhhlvqphplhqihlvilapc
lqmvfhlvkweqvknpqkrnnkkilivii*ylvfkkikikkktek*tflyyitflkekk

Query= Contig-U12135-1 (Contig-U12135-1Q)
/CSM_Contig/Contig-U12135-1Q.Seq.d
         (879 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U12135-1 (Contig-U12135-1Q) /CSM_Contig/Conti...   801  0.0
Contig-U12467-1 (Contig-U12467-1Q) /CSM_Contig/Conti...    54  3e-07
Contig-U11288-1 (Contig-U11288-1Q) /CSM_Contig/Conti...    54  3e-07
Contig-U11827-1 (Contig-U11827-1Q) /CSM_Contig/Conti...    52  1e-06
Contig-U11521-1 (Contig-U11521-1Q) /CSM_Contig/Conti...    52  1e-06
Contig-U11357-1 (Contig-U11357-1Q) /CSM_Contig/Conti...    52  1e-06
Contig-U10985-1 (Contig-U10985-1Q) /CSM_Contig/Conti...    52  1e-06
Contig-U05902-1 (Contig-U05902-1Q) /CSM_Contig/Conti...    52  1e-06
Contig-U04088-1 (Contig-U04088-1Q) /CSM_Contig/Conti...    52  1e-06
Contig-U14477-1 (Contig-U14477-1Q) /CSM_Contig/Conti...    48  2e-05

>Contig-U12135-1 (Contig-U12135-1Q) /CSM_Contig/Contig-U12135-1Q.Seq.d
          Length = 879

 Score =  801 bits (404), Expect = 0.0
 Identities = 437/437 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggtagttgtcgatgtggtggaagatggtgttgaaccaaacaatcctgttgatggtgttgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ggtagttgtcgatgtggtggaagatggtgttgaaccaaacaatcctgttgatggtgttgt 60

                                                                       
Query: 61  tgttgctgctgttgttgttgatgaggaaccaaatggtgtagcagtagtggatgttgttgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgttgctgctgttgttgttgatgaggaaccaaatggtgtagcagtagtggatgttgttgt 120

                                                                       
Query: 121 tgaaccaaataatcctgttgatggagcagtattggaagtnnnnnnnnnnatctaccgccg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaaccaaataatcctgttgatggagcagtattggaagtnnnnnnnnnnatctaccgccg 180

                                                                       
Query: 181 ctactaccacacnttcttttggatcatcaccatttggagcaccatcatctacatcttcaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctactaccacacnttcttttggatcatcaccatttggagcaccatcatctacatcttcaa 240

                                                                       
Query: 241 ctccatttggagcatcaccatttggagcaccaacatctacatcctcacctccatttggag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctccatttggagcatcaccatttggagcaccaacatctacatcctcacctccatttggag 300

                                                                       
Query: 301 caccaacatctgcatcctcaactccatttggagcaccacaaatttcaacctcaagttcga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caccaacatctgcatcctcaactccatttggagcaccacaaatttcaacctcaagttcga 360

                                                                       
Query: 361 ctaatctttttggaggagcatcatcttcaaccgctgcaccatcattcgtctcttcaccat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctaatctttttggaggagcatcatcttcaaccgctgcaccatcattcgtctcttcaccat 420

                            
Query: 421 ttggagcaccaataacc 437
           |||||||||||||||||
Sbjct: 421 ttggagcaccaataacc 437


 Score =  543 bits (274), Expect = e-154
 Identities = 274/274 (100%)
 Strand = Plus / Plus

                                                                       
Query: 466 taccatttggagcaccaactacttcatcctcatcctcaactccatttggtgcatcacctt 525
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 taccatttggagcaccaactacttcatcctcatcctcaactccatttggtgcatcacctt 525

                                                                       
Query: 526 ttggaaattcaatggcttcaactacatcaccatttggagcacctgcagcttcaccttcac 585
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ttggaaattcaatggcttcaactacatcaccatttggagcacctgcagcttcaccttcac 585

                                                                       
Query: 586 catttggaatacaggcagcctcaccctctccatttggagcaccagcagcctcaccttcac 645
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 catttggaatacaggcagcctcaccctctccatttggagcaccagcagcctcaccttcac 645

                                                                       
Query: 646 catttggttcaaccccatccactgcaccaaatccatttggtaattttggcgccgtgcctg 705
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 catttggttcaaccccatccactgcaccaaatccatttggtaattttggcgccgtgcctg 705

                                             
Query: 706 caaatggtttttcacttggtaaaatgggaacaag 739
           ||||||||||||||||||||||||||||||||||
Sbjct: 706 caaatggtttttcacttggtaaaatgggaacaag 739


 Score = 61.9 bits (31), Expect = 1e-09
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 773 tattaatagtaattatttaatatttagtatt 803
           |||||||||||||||||||||||||||||||
Sbjct: 773 tattaatagtaattatttaatatttagtatt 803


 Score = 60.0 bits (30), Expect = 4e-09
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 842 cttttttgtattatataacttttttaaaag 871
           ||||||||||||||||||||||||||||||
Sbjct: 842 cttttttgtattatataacttttttaaaag 871


 Score = 46.1 bits (23), Expect = 6e-05
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 496 catcctcaactccatttggtgcatcaccttttgga 530
           |||| |||||||||||||| |||||||| ||||||
Sbjct: 232 catcttcaactccatttggagcatcaccatttgga 266


 Score = 46.1 bits (23), Expect = 6e-05
 Identities = 58/70 (82%), Gaps = 6/70 (8%)
 Strand = Plus / Plus

                                                                       
Query: 203 atcatcaccatttggagcacca------tcatctacatcttcaactccatttggagcatc 256
           ||||| ||||||||||||||||      |||||  |||| |||||||||||||| |||||
Sbjct: 461 atcattaccatttggagcaccaactacttcatcctcatcctcaactccatttggtgcatc 520

                     
Query: 257 accatttgga 266
           ||| ||||||
Sbjct: 521 accttttgga 530


 Score = 38.2 bits (19), Expect = 0.016
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 313 catcctcaactccatttgg 331
           |||||||||||||||||||
Sbjct: 496 catcctcaactccatttgg 514


 Score = 38.2 bits (19), Expect = 0.016
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 253 catcaccatttggagcacc 271
           |||||||||||||||||||
Sbjct: 550 catcaccatttggagcacc 568


 Score = 38.2 bits (19), Expect = 0.016
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 467 accatttggagcaccaactacttcatcctca 497
           ||||||||||||||||||  || ||||||||
Sbjct: 257 accatttggagcaccaacatctacatcctca 287


 Score = 38.2 bits (19), Expect = 0.016
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 257 accatttggagcaccaacatctacatcctca 287
           ||||||||||||||||||  || ||||||||
Sbjct: 467 accatttggagcaccaactacttcatcctca 497


 Score = 38.2 bits (19), Expect = 0.016
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 550 catcaccatttggagcacc 568
           |||||||||||||||||||
Sbjct: 253 catcaccatttggagcacc 271


 Score = 38.2 bits (19), Expect = 0.016
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 496 catcctcaactccatttgg 514
           |||||||||||||||||||
Sbjct: 313 catcctcaactccatttgg 331


 Score = 38.2 bits (19), Expect = 0.016
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 550 catcaccatttggagcacc 568
           |||||||||||||||||||
Sbjct: 205 catcaccatttggagcacc 223


 Score = 38.2 bits (19), Expect = 0.016
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 205 catcaccatttggagcacc 223
           |||||||||||||||||||
Sbjct: 550 catcaccatttggagcacc 568


 Score = 36.2 bits (18), Expect = 0.062
 Identities = 27/30 (90%)
 Strand = Plus / Plus

                                         
Query: 468 ccatttggagcaccaactacttcatcctca 497
           |||||||||||||||||  || ||||||||
Sbjct: 291 ccatttggagcaccaacatctgcatcctca 320


 Score = 36.2 bits (18), Expect = 0.062
 Identities = 27/30 (90%)
 Strand = Plus / Plus

                                         
Query: 291 ccatttggagcaccaacatctgcatcctca 320
           |||||||||||||||||  || ||||||||
Sbjct: 468 ccatttggagcaccaactacttcatcctca 497


 Score = 34.2 bits (17), Expect = 0.24
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 322 ctccatttggagcacca 338
           |||||||||||||||||
Sbjct: 613 ctccatttggagcacca 629


 Score = 34.2 bits (17), Expect = 0.24
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 416 accatttggagcaccaa 432
           |||||||||||||||||
Sbjct: 467 accatttggagcaccaa 483


 Score = 34.2 bits (17), Expect = 0.24
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 613 ctccatttggagcacca 629
           |||||||||||||||||
Sbjct: 289 ctccatttggagcacca 305


 Score = 34.2 bits (17), Expect = 0.24
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 552 tcaccatttggagcacc 568
           |||||||||||||||||
Sbjct: 414 tcaccatttggagcacc 430


 Score = 34.2 bits (17), Expect = 0.24
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 467 accatttggagcaccaa 483
           |||||||||||||||||
Sbjct: 416 accatttggagcaccaa 432


 Score = 34.2 bits (17), Expect = 0.24
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 414 tcaccatttggagcacc 430
           |||||||||||||||||
Sbjct: 552 tcaccatttggagcacc 568


 Score = 34.2 bits (17), Expect = 0.24
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 289 ctccatttggagcacca 305
           |||||||||||||||||
Sbjct: 613 ctccatttggagcacca 629


 Score = 34.2 bits (17), Expect = 0.24
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 613 ctccatttggagcacca 629
           |||||||||||||||||
Sbjct: 322 ctccatttggagcacca 338


 Score = 30.2 bits (15), Expect = 3.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 324 ccatttggagcacca 338
           |||||||||||||||
Sbjct: 468 ccatttggagcacca 482


 Score = 30.2 bits (15), Expect = 3.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 615 ccatttggagcacca 629
           |||||||||||||||
Sbjct: 417 ccatttggagcacca 431


 Score = 30.2 bits (15), Expect = 3.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 615 ccatttggagcacca 629
           |||||||||||||||
Sbjct: 258 ccatttggagcacca 272


 Score = 30.2 bits (15), Expect = 3.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 417 ccatttggagcacca 431
           |||||||||||||||
Sbjct: 615 ccatttggagcacca 629


 Score = 30.2 bits (15), Expect = 3.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 210 ccatttggagcacca 224
           |||||||||||||||
Sbjct: 615 ccatttggagcacca 629


 Score = 30.2 bits (15), Expect = 3.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 615 ccatttggagcacca 629
           |||||||||||||||
Sbjct: 210 ccatttggagcacca 224


 Score = 30.2 bits (15), Expect = 3.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 468 ccatttggagcacca 482
           |||||||||||||||
Sbjct: 324 ccatttggagcacca 338


 Score = 30.2 bits (15), Expect = 3.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 258 ccatttggagcacca 272
           |||||||||||||||
Sbjct: 615 ccatttggagcacca 629


>Contig-U12467-1 (Contig-U12467-1Q) /CSM_Contig/Contig-U12467-1Q.Seq.d
          Length = 1279

 Score = 54.0 bits (27), Expect = 3e-07
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 46  tgttgatggtgttgttgttgctgctgttgttgttg 80
           ||||| || ||||||||||||||||||||||||||
Sbjct: 215 tgttgctgttgttgttgttgctgctgttgttgttg 181


 Score = 40.1 bits (20), Expect = 0.004
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 45  ctgttgatggtgttgttgttgctgctgttgttgttg 80
           |||||| || ||||||||||| ||||| ||||||||
Sbjct: 219 ctgttgttgctgttgttgttgttgctgctgttgttg 184


 Score = 36.2 bits (18), Expect = 0.062
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 55  tgttgttgttgctgctgttgttgttg 80
           |||||||| ||||| |||||||||||
Sbjct: 203 tgttgttgctgctgttgttgttgttg 178


 Score = 34.2 bits (17), Expect = 0.24
 Identities = 23/25 (92%)
 Strand = Plus / Minus

                                    
Query: 56  gttgttgttgctgctgttgttgttg 80
           |||| ||||| ||||||||||||||
Sbjct: 223 gttgctgttgttgctgttgttgttg 199


 Score = 30.2 bits (15), Expect = 3.8
 Identities = 27/31 (87%)
 Strand = Plus / Minus

                                          
Query: 45  ctgttgatggtgttgttgttgctgctgttgt 75
           |||||| || ||||||||||| | |||||||
Sbjct: 192 ctgttgttgttgttgttgttgatactgttgt 162


>Contig-U11288-1 (Contig-U11288-1Q) /CSM_Contig/Contig-U11288-1Q.Seq.d
          Length = 3111

 Score = 54.0 bits (27), Expect = 3e-07
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 46   tgttgatggtgttgttgttgctgctgttgttgttg 80
            ||||| || ||||||||||||||||||||||||||
Sbjct: 2634 tgttgttgttgttgttgttgctgctgttgttgttg 2600


 Score = 52.0 bits (26), Expect = 1e-06
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 55   tgttgttgttgctgctgttgttgttg 80
            ||||||||||||||||||||||||||
Sbjct: 2607 tgttgttgttgctgctgttgttgttg 2582


 Score = 38.2 bits (19), Expect = 0.016
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                               
Query: 46   tgttgatggtgttgttgttgctgctgttgttgttg 80
            ||||| || |||||||| ||||| |||||||||||
Sbjct: 2631 tgttgttgttgttgttgctgctgttgttgttgttg 2597


 Score = 38.2 bits (19), Expect = 0.016
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                               
Query: 46   tgttgatggtgttgttgttgctgctgttgttgttg 80
            ||||| || ||||||||||| ||||| ||||||||
Sbjct: 2619 tgttgctgctgttgttgttgttgctgctgttgttg 2585


 Score = 38.2 bits (19), Expect = 0.016
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                               
Query: 46   tgttgatggtgttgttgttgctgctgttgttgttg 80
            ||||| || ||||||||||| ||||| ||||||||
Sbjct: 2637 tgttgttgttgttgttgttgttgctgctgttgttg 2603


 Score = 34.2 bits (17), Expect = 0.24
 Identities = 26/29 (89%)
 Strand = Plus / Minus

                                         
Query: 46   tgttgatggtgttgttgttgctgctgttg 74
            ||||| || |||||||||||||| |||||
Sbjct: 2601 tgttgctgctgttgttgttgctgttgttg 2573


 Score = 32.2 bits (16), Expect = 0.97
 Identities = 22/24 (91%)
 Strand = Plus / Minus

                                    
Query: 57   ttgttgttgctgctgttgttgttg 80
            ||||||||| || |||||||||||
Sbjct: 2638 ttgttgttgttgttgttgttgttg 2615


 Score = 32.2 bits (16), Expect = 0.97
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                
Query: 58   tgttgttgctgctgttgttg 77
            |||||||| |||||||||||
Sbjct: 2592 tgttgttgttgctgttgttg 2573


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 25,514
Number of Sequences: 6905
Number of extensions: 25514
Number of successful extensions: 5609
Number of sequences better than 10.0: 658
length of query: 879
length of database: 5,674,871
effective HSP length: 16
effective length of query: 863
effective length of database: 5,564,391
effective search space: 4802069433
effective search space used: 4802069433
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U12135-1 (Contig-U12135-1Q) /CSM_Contig/Contig-U12135-1Q.Seq.d
         (879 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...   545   0.0    2
(BJ443956) Dictyostelium discoideum cDNA clone:ddv54a23, 3' ...   525   0.0    2
(BJ439255) Dictyostelium discoideum cDNA clone:ddv39k20, 3' ...   494   0.0    2
(AU034169) Dictyostelium discoideum slug cDNA, clone SLC134.      537   0.0    2
(BJ433776) Dictyostelium discoideum cDNA clone:ddv22l20, 3' ...   454   0.0    2
(AU060896) Dictyostelium discoideum slug cDNA, clone SLC134.      157   6e-60  2
(CP000497) Pichia stipitis CBS 6054 chromosome 3, complete s...    32   2e-06  4
(CL312593) mth2-126H19_OP Medicago truncatula BAC end sequen...    26   2e-04  6
(BJ415538) Dictyostelium discoideum cDNA clone:ddv22l20, 5' ...    42   0.023  2
(CC000504) pPGPseq-7F08 pPGP Arachis hypogaea subsp. hypogae...    36   0.030  2
(BZ969694) PUDEW42TD ZM_0.6_1.0_KB Zea mays genomic clone ZM...    46   0.12   2
(CL426213) ZMMBBb0449L23f ZMMBBb (HindIII) Zea mays subsp. m...    46   0.13   2
(AR549901) Sequence 5032 from patent US 6747137.                   32   0.54   4
(AF263455) Dictyostelium discoideum TagA (tagA) mRNA, comple...    48   0.56   1
(CC264903) CH261-33P18_RM1.1 CH261 Gallus gallus genomic clo...    48   0.56   1
(BG094998) mac26a04.y1 Soares mouse 3NbMS Mus musculus cDNA ...    48   0.56   1
(AC209220) Zea mays chromosome 3 clone ZMMBBb-460N4; ZMMBBb0...    46   1.6    4
(AC139395) Homo sapiens chromosome 11 clone RP11-1167A4 map ...    40   2.0    2
(AC208224) Zea mays chromosome 3 clone CH201-304P4; ZMMBBc03...    46   2.2    1
(CG455067) PUIKC79TDB ZM_0.6_1.0_KB Zea mays genomic clone Z...    46   2.2    1
(CG032475) PUIKC79TD ZM_0.6_1.0_KB Zea mays genomic clone ZM...    46   2.2    1
(EX550759) AIAC-aab10f04.b1 Ancylostoma_caninum_EST_Male_pSM...    46   2.2    1
(EX542217) AIAC-aaa49d05.b1 Ancylostoma_caninum_EST_Male_pSM...    46   2.2    1
(BB935847) Trifolium pratense cDNA clone:RCC08710.                 32   2.9    3
(FK839344) K05091F01 Karenia brevis Multi-strain Library Kar...    40   3.8    2
(FK839414) K05092F01 Karenia brevis Multi-strain Library Kar...    40   4.0    2
(FK847078) K05381E08 Karenia brevis Multi-strain Library Kar...    40   4.0    2
(DN480511) rnpl2_a173.y1.abd E. pilosa (wild type of tef) le...    42   4.1    2
(AP009156) Lotus japonicus genomic DNA, chromosome 2, clone:...    34   4.4    2
(AC105136) Homo sapiens chromosome 17 clone CTD-2560N22 map ...    42   4.5    2
(BB936024) Trifolium pratense cDNA clone:RCC08905.                 32   4.9    3
(BB937114) Trifolium pratense cDNA clone:RCC10154.                 32   5.0    3
(BB933368) Trifolium pratense cDNA clone:RCC05789.                 32   5.0    3
(AC136299) Homo sapiens chromosome 11 clone CTD-2565G8 map 1...    40   5.4    2
(ET433416) MUGQ_CH252P428B08T7_CP829_032 CHORI-252 Vervet Mo...    34   5.7    2
(CV536939) NOD_235_H05 Phaseolus vulgaris nodule EST library...    34   5.7    2
(CV535190) NOD_213_F09 Phaseolus vulgaris nodule EST library...    34   5.7    2
(CV535786) NOD_220_H07 Phaseolus vulgaris nodule EST library...    34   5.7    2
(CV536037) NOD_223_H06 Phaseolus vulgaris nodule EST library...    34   5.7    2
(CV536747) NOD_233_D10 Phaseolus vulgaris nodule EST library...    34   5.7    2
(CV532063) LVS_017_D07 Phaseolus vulgaris leaf EST library P...    34   5.7    2
(CV535728) NOD_220_B08 Phaseolus vulgaris nodule EST library...    34   5.7    2
(CV534287) NOD_201_G08 Phaseolus vulgaris nodule EST library...    34   5.7    2
(CV537297) NOD_240_D07 Phaseolus vulgaris nodule EST library...    34   5.7    2
(CV535599) NOD_218_D05 Phaseolus vulgaris nodule EST library...    34   5.8    2
(CV534139) LVS_047_H07 Phaseolus vulgaris leaf EST library P...    34   5.8    2
(CV533363) LVS_038_D09 Phaseolus vulgaris leaf EST library P...    34   6.0    2
(AC137897) Homo sapiens chromosome 11 clone RP11-844O5 map 1...    40   6.8    2
(AC158257) Ornithorhynchus anatinus clone OA_Bb-249C20, WORK...    44   8.8    1
(CU915552) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   8.8    1
(CU633632) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   8.8    1
(CU466990) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   8.8    1
(AC193298) Ornithorhynchus anatinus clone OA_Bb-276B21, WORK...    44   8.8    1
(ER560275) 1093015740347 Global-Ocean-Sampling_GS-36-01-01-2...    44   8.8    1
(BZ993177) PUCBL16TD ZM_0.6_1.0_KB Zea mays genomic clone ZM...    44   8.8    1
(CD486284) CFUS8.3C03 Cotton Root and Hypocotyl tissues infe...    44   8.8    1
(BB412578) Mus musculus 7 days embryo cDNA, RIKEN full-lengt...    44   8.8    1
(ES789989) 040112AARA011929CT (AARA) Royal Gala partially se...    32   9.0    3

>(AC116957) Dictyostelium discoideum chromosome 2 map 1685067-2090751
              strain AX4, complete sequence.
          Length = 405682

 Score =  545 bits (275), Expect(2) = 0.0
 Identities = 275/275 (100%)
 Strand = Plus / Plus


Query: 466    taccatttggagcaccaactacttcatcctcatcctcaactccatttggtgcatcacctt 525
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214883 taccatttggagcaccaactacttcatcctcatcctcaactccatttggtgcatcacctt 214942


Query: 526    ttggaaattcaatggcttcaactacatcaccatttggagcacctgcagcttcaccttcac 585
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214943 ttggaaattcaatggcttcaactacatcaccatttggagcacctgcagcttcaccttcac 215002


Query: 586    catttggaatacaggcagcctcaccctctccatttggagcaccagcagcctcaccttcac 645
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215003 catttggaatacaggcagcctcaccctctccatttggagcaccagcagcctcaccttcac 215062


Query: 646    catttggttcaaccccatccactgcaccaaatccatttggtaattttggcgccgtgcctg 705
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215063 catttggttcaaccccatccactgcaccaaatccatttggtaattttggcgccgtgcctg 215122


Query: 706    caaatggtttttcacttggtaaaatgggaacaagt 740
              |||||||||||||||||||||||||||||||||||
Sbjct: 215123 caaatggtttttcacttggtaaaatgggaacaagt 215157

 Score =  525 bits (265), Expect(2) = 0.0
 Identities = 267/268 (99%)
 Strand = Plus / Plus


Query: 170    atctaccgccgctactaccacacnttcttttggatcatcaccatttggagcaccatcatc 229
              ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 214587 atctaccgccgctactaccacaccttcttttggatcatcaccatttggagcaccatcatc 214646


Query: 230    tacatcttcaactccatttggagcatcaccatttggagcaccaacatctacatcctcacc 289
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214647 tacatcttcaactccatttggagcatcaccatttggagcaccaacatctacatcctcacc 214706


Query: 290    tccatttggagcaccaacatctgcatcctcaactccatttggagcaccacaaatttcaac 349
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214707 tccatttggagcaccaacatctgcatcctcaactccatttggagcaccacaaatttcaac 214766


Query: 350    ctcaagttcgactaatctttttggaggagcatcatcttcaaccgctgcaccatcattcgt 409
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214767 ctcaagttcgactaatctttttggaggagcatcatcttcaaccgctgcaccatcattcgt 214826


Query: 410    ctcttcaccatttggagcaccaataacc 437
              ||||||||||||||||||||||||||||
Sbjct: 214827 ctcttcaccatttggagcaccaataacc 214854

 Score =  149 bits (75), Expect(2) = 7e-37
 Identities = 75/75 (100%)
 Strand = Plus / Minus


Query: 81     atgaggaaccaaatggtgtagcagtagtggatgttgttgttgaaccaaataatcctgttg 140
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214072 atgaggaaccaaatggtgtagcagtagtggatgttgttgttgaaccaaataatcctgttg 214013


Query: 141    atggagcagtattgg 155
              |||||||||||||||
Sbjct: 214012 atggagcagtattgg 213998

 Score = 38.2 bits (19), Expect(2) = 7e-37
 Identities = 22/23 (95%)
 Strand = Plus / Minus


Query: 32     gaaccaaacaatcctgttgatgg 54
              |||||||| ||||||||||||||
Sbjct: 214103 gaaccaaataatcctgttgatgg 214081

 Score = 81.8 bits (41), Expect(7) = 2e-26
 Identities = 53/57 (92%)
 Strand = Plus / Plus


Query: 198    tttggatcatcaccatttggagcaccatcatctacatcttcaactccatttggagca 254
              |||||| |||||||||||||||||||| |||||||||| ||| ||||||||||||||
Sbjct: 214663 tttggagcatcaccatttggagcaccaacatctacatcctcacctccatttggagca 214719

 Score = 60.0 bits (30), Expect(7) = 2e-26
 Identities = 36/38 (94%)
 Strand = Plus / Plus


Query: 555    ccatttggagcacctgcagcttcaccttcaccatttgg 592
              |||||||||||||| ||||| |||||||||||||||||
Sbjct: 215032 ccatttggagcaccagcagcctcaccttcaccatttgg 215069

 Score = 38.2 bits (19), Expect(7) = 2e-26
 Identities = 19/19 (100%)
 Strand = Plus / Plus


Query: 255    tcaccatttggagcaccaa 273
              |||||||||||||||||||
Sbjct: 214831 tcaccatttggagcaccaa 214849

 Score = 38.2 bits (19), Expect(7) = 2e-26
 Identities = 19/19 (100%)
 Strand = Plus / Plus


Query: 313    catcctcaactccatttgg 331
              |||||||||||||||||||
Sbjct: 214913 catcctcaactccatttgg 214931

 Score = 36.2 bits (18), Expect(7) = 2e-26
 Identities = 27/30 (90%)
 Strand = Plus / Plus


Query: 291    ccatttggagcaccaacatctgcatcctca 320
              |||||||||||||||||  || ||||||||
Sbjct: 214885 ccatttggagcaccaactacttcatcctca 214914

 Score = 34.2 bits (17), Expect(7) = 2e-26
 Identities = 17/17 (100%)
 Strand = Plus / Plus


Query: 414    tcaccatttggagcacc 430
              |||||||||||||||||
Sbjct: 214969 tcaccatttggagcacc 214985

 Score = 26.3 bits (13), Expect(7) = 2e-26
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 112    tgttgttgttgaa 124
              |||||||||||||
Sbjct: 156301 tgttgttgttgaa 156313

 Score = 65.9 bits (33), Expect(10) = 2e-24
 Identities = 42/45 (93%)
 Strand = Plus / Plus


Query: 291    ccatttggagcaccaacatctgcatcctcaactccatttggagca 335
              ||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 214627 ccatttggagcaccatcatctacatcttcaactccatttggagca 214671

 Score = 60.0 bits (30), Expect(10) = 2e-24
 Identities = 36/38 (94%)
 Strand = Plus / Plus


Query: 615    ccatttggagcaccagcagcctcaccttcaccatttgg 652
              |||||||||||||| ||||| |||||||||||||||||
Sbjct: 214972 ccatttggagcacctgcagcttcaccttcaccatttgg 215009

 Score = 38.2 bits (19), Expect(10) = 2e-24
 Identities = 19/19 (100%)
 Strand = Plus / Plus


Query: 414    tcaccatttggagcaccaa 432
              |||||||||||||||||||
Sbjct: 214672 tcaccatttggagcaccaa 214690

 Score = 38.2 bits (19), Expect(10) = 2e-24
 Identities = 19/19 (100%)
 Strand = Plus / Plus


Query: 496    catcctcaactccatttgg 514
              |||||||||||||||||||
Sbjct: 214730 catcctcaactccatttgg 214748

 Score = 36.2 bits (18), Expect(10) = 2e-24
 Identities = 27/30 (90%)
 Strand = Plus / Plus


Query: 468    ccatttggagcaccaactacttcatcctca 497
              |||||||||||||||||  || ||||||||
Sbjct: 214708 ccatttggagcaccaacatctgcatcctca 214737

 Score = 34.2 bits (17), Expect(10) = 2e-24
 Identities = 17/17 (100%)
 Strand = Plus / Plus


Query: 552    tcaccatttggagcacc 568
              |||||||||||||||||
Sbjct: 214831 tcaccatttggagcacc 214847

 Score = 30.2 bits (15), Expect(10) = 2e-24
 Identities = 18/19 (94%)
 Strand = Plus / Plus


Query: 223   catcatctacatcttcaac 241
             ||||||||||||| |||||
Sbjct: 78349 catcatctacatcatcaac 78367

 Score = 30.2 bits (15), Expect(10) = 2e-24
 Identities = 15/15 (100%)
 Strand = Plus / Plus


Query: 258    ccatttggagcacca 272
              |||||||||||||||
Sbjct: 214522 ccatttggagcacca 214536

 Score = 28.2 bits (14), Expect(10) = 2e-24
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 200   tggatcatcaccat 213
             ||||||||||||||
Sbjct: 38593 tggatcatcaccat 38606

 Score = 26.3 bits (13), Expect(10) = 2e-24
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 716    ttcacttggtaaa 728
              |||||||||||||
Sbjct: 367838 ttcacttggtaaa 367850

 Score =  107 bits (54), Expect = 7e-19
 Identities = 54/54 (100%)
 Strand = Plus / Minus


Query: 1      ggtagttgtcgatgtggtggaagatggtgttgaaccaaacaatcctgttgatgg 54
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213804 ggtagttgtcgatgtggtggaagatggtgttgaaccaaacaatcctgttgatgg 213751

 Score = 81.8 bits (41), Expect(8) = 2e-16
 Identities = 53/57 (92%)
 Strand = Plus / Plus


Query: 246    tttggagcatcaccatttggagcaccaacatctacatcctcacctccatttggagca 302
              |||||| |||||||||||||||||||| |||||||||| ||| ||||||||||||||
Sbjct: 214615 tttggatcatcaccatttggagcaccatcatctacatcttcaactccatttggagca 214671

 Score = 38.2 bits (19), Expect(8) = 2e-16
 Identities = 58/71 (81%)
 Strand = Plus / Plus


Query: 582    tcaccatttggaatacaggcagcctcaccctctccatttggagcaccagcagcctcacct 641
              ||||||||||||  ||  ||||| ||||| || |||||||||  ||  |||||||||||
Sbjct: 214969 tcaccatttggagcacctgcagcttcaccttcaccatttggaatacaggcagcctcaccc 215028


Query: 642    tcaccatttgg 652
              || ||||||||
Sbjct: 215029 tctccatttgg 215039

 Score = 34.2 bits (17), Expect(8) = 2e-16
 Identities = 17/17 (100%)
 Strand = Plus / Plus


Query: 467    accatttggagcaccaa 483
              |||||||||||||||||
Sbjct: 214833 accatttggagcaccaa 214849

 Score = 32.2 bits (16), Expect(8) = 2e-16
 Identities = 16/16 (100%)
 Strand = Plus / Plus


Query: 417    ccatttggagcaccaa 432
              ||||||||||||||||
Sbjct: 214708 ccatttggagcaccaa 214723

 Score = 30.2 bits (15), Expect(8) = 2e-16
 Identities = 21/23 (91%)
 Strand = Plus / Plus


Query: 232    catcttcaactccatttggagca 254
              ||||||| | |||||||||||||
Sbjct: 214511 catcttctaatccatttggagca 214533

 Score = 30.2 bits (15), Expect(8) = 2e-16
 Identities = 15/15 (100%)
 Strand = Plus / Plus


Query: 324    ccatttggagcacca 338
              |||||||||||||||
Sbjct: 214675 ccatttggagcacca 214689

 Score = 30.2 bits (15), Expect(8) = 2e-16
 Identities = 15/15 (100%)
 Strand = Plus / Plus


Query: 554    accatttggagcacc 568
              |||||||||||||||
Sbjct: 214884 accatttggagcacc 214898

 Score = 28.2 bits (14), Expect(8) = 2e-16
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 205   catcaccatttgga 218
             ||||||||||||||
Sbjct: 72718 catcaccatttgga 72731

 Score = 79.8 bits (40), Expect = 2e-10
 Identities = 46/48 (95%)
 Strand = Plus / Plus


Query: 291    ccatttggagcaccaacatctgcatcctcaactccatttggagcacca 338
              ||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 214675 ccatttggagcaccaacatctacatcctcacctccatttggagcacca 214722

 Score = 79.8 bits (40), Expect = 2e-10
 Identities = 46/48 (95%)
 Strand = Plus / Plus


Query: 258    ccatttggagcaccaacatctacatcctcacctccatttggagcacca 305
              ||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 214708 ccatttggagcaccaacatctgcatcctcaactccatttggagcacca 214755

 Score = 48.1 bits (24), Expect(3) = 3e-10
 Identities = 33/36 (91%)
 Strand = Plus / Minus


Query: 115    tgttgttgaaccaaataatcctgttgatggagcagt 150
              |||||| || |||||||||||||| |||||||||||
Sbjct: 214215 tgttgtagatccaaataatcctgtagatggagcagt 214180

 Score = 36.2 bits (18), Expect(3) = 3e-10
 Identities = 27/30 (90%)
 Strand = Plus / Minus


Query: 93     atggtgtagcagtagtggatgttgttgttg 122
              |||||||||  ||||| |||||||||||||
Sbjct: 214279 atggtgtagtggtagtagatgttgttgttg 214250

 Score = 30.2 bits (15), Expect(3) = 3e-10
 Identities = 18/19 (94%)
 Strand = Plus / Minus


Query: 35     ccaaacaatcctgttgatg 53
              ||||| |||||||||||||
Sbjct: 214334 ccaaataatcctgttgatg 214316

 Score = 46.1 bits (23), Expect(3) = 4e-09
 Identities = 32/35 (91%)
 Strand = Plus / Plus


Query: 232    catcttcaactccatttggagcatcaccatttgga 266
              |||| |||||||||||||| |||||||| ||||||
Sbjct: 214913 catcctcaactccatttggtgcatcaccttttgga 214947

 Score = 36.2 bits (18), Expect(3) = 4e-09
 Identities = 21/22 (95%)
 Strand = Plus / Plus


Query: 203    atcatcaccatttggagcacca 224
              ||||| ||||||||||||||||
Sbjct: 214878 atcattaccatttggagcacca 214899

 Score = 28.2 bits (14), Expect(3) = 4e-09
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 291    ccatttggagcacc 304
              ||||||||||||||
Sbjct: 214972 ccatttggagcacc 214985

 Score = 46.1 bits (23), Expect(3) = 5e-08
 Identities = 32/35 (91%)
 Strand = Plus / Plus


Query: 496    catcctcaactccatttggtgcatcaccttttgga 530
              |||| |||||||||||||| |||||||| ||||||
Sbjct: 214649 catcttcaactccatttggagcatcaccatttgga 214683

 Score = 32.2 bits (16), Expect(3) = 5e-08
 Identities = 16/16 (100%)
 Strand = Plus / Plus


Query: 467    accatttggagcacca 482
              ||||||||||||||||
Sbjct: 214626 accatttggagcacca 214641

 Score = 28.2 bits (14), Expect(3) = 5e-08
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 555    ccatttggagcacc 568
              ||||||||||||||
Sbjct: 214708 ccatttggagcacc 214721

 Score = 65.9 bits (33), Expect = 2e-06
 Identities = 33/33 (100%)
 Strand = Plus / Minus


Query: 112    tgttgttgttgaaccaaataatcctgttgatgg 144
              |||||||||||||||||||||||||||||||||
Sbjct: 214257 tgttgttgttgaaccaaataatcctgttgatgg 214225

 Score = 65.9 bits (33), Expect = 2e-06
 Identities = 42/45 (93%)
 Strand = Plus / Plus


Query: 210    ccatttggagcaccatcatctacatcttcaactccatttggagca 254
              ||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 214708 ccatttggagcaccaacatctgcatcctcaactccatttggagca 214752

 Score = 46.1 bits (23), Expect(2) = 3e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus


Query: 118    tgttgaaccaaataatcctgttgatgg 144
              |||||||||||| ||||||||||||||
Sbjct: 213777 tgttgaaccaaacaatcctgttgatgg 213751

 Score = 46.1 bits (23), Expect(2) = 3e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus


Query: 28     tgttgaaccaaacaatcctgttgatgg 54
              |||||||||||| ||||||||||||||
Sbjct: 214035 tgttgaaccaaataatcctgttgatgg 214009

 Score = 46.1 bits (23), Expect(8) = 0.001
 Identities = 23/23 (100%)
 Strand = Plus / Minus


Query: 122    gaaccaaataatcctgttgatgg 144
              |||||||||||||||||||||||
Sbjct: 214103 gaaccaaataatcctgttgatgg 214081

 Score = 46.1 bits (23), Expect(8) = 0.001
 Identities = 26/27 (96%)
 Strand = Plus / Minus


Query: 28     tgttgaaccaaacaatcctgttgatgg 54
              |||||||||||| ||||||||||||||
Sbjct: 214251 tgttgaaccaaataatcctgttgatgg 214225

 Score = 28.2 bits (14), Expect(8) = 0.001
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 680    atttggtaattttg 693
              ||||||||||||||
Sbjct: 187260 atttggtaattttg 187247

 Score = 28.2 bits (14), Expect(8) = 0.001
 Identities = 17/18 (94%)
 Strand = Plus / Minus


Query: 96     gtgtagcagtagtggatg 113
              |||| |||||||||||||
Sbjct: 214156 gtgtggcagtagtggatg 214139

 Score = 28.2 bits (14), Expect(8) = 0.001
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 20     gaagatggtgttga 33
              ||||||||||||||
Sbjct: 214517 gaagatggtgttga 214504

 Score = 26.3 bits (13), Expect(8) = 0.001
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 702    cctgcaaatggtt 714
              |||||||||||||
Sbjct: 165730 cctgcaaatggtt 165718

 Score = 26.3 bits (13), Expect(8) = 0.001
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 533    ttcaatggcttca 545
              |||||||||||||
Sbjct: 199958 ttcaatggcttca 199946

 Score = 26.3 bits (13), Expect(8) = 0.001
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 368    ttttggaggagca 380
              |||||||||||||
Sbjct: 212612 ttttggaggagca 212600

 Score = 38.2 bits (19), Expect(2) = 0.002
 Identities = 28/31 (90%)
 Strand = Plus / Plus


Query: 467    accatttggagcaccaactacttcatcctca 497
              ||||||||||||||||||  || ||||||||
Sbjct: 214674 accatttggagcaccaacatctacatcctca 214704

 Score = 38.2 bits (19), Expect(2) = 0.002
 Identities = 28/31 (90%)
 Strand = Plus / Plus


Query: 257    accatttggagcaccaacatctacatcctca 287
              ||||||||||||||||||  || ||||||||
Sbjct: 214884 accatttggagcaccaactacttcatcctca 214914

 Score = 36.2 bits (18), Expect(2) = 0.002
 Identities = 18/18 (100%)
 Strand = Plus / Plus


Query: 414    tcaccatttggagcacca 431
              ||||||||||||||||||
Sbjct: 214624 tcaccatttggagcacca 214641

 Score = 36.2 bits (18), Expect(2) = 0.002
 Identities = 18/18 (100%)
 Strand = Plus / Plus


Query: 207    tcaccatttggagcacca 224
              ||||||||||||||||||
Sbjct: 214831 tcaccatttggagcacca 214848

 Score = 38.2 bits (19), Expect(7) = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus


Query: 550    catcaccatttggagcacc 568
              |||||||||||||||||||
Sbjct: 214622 catcaccatttggagcacc 214640

 Score = 34.2 bits (17), Expect(7) = 1.3
 Identities = 17/17 (100%)
 Strand = Plus / Plus


Query: 613    ctccatttggagcacca 629
              |||||||||||||||||
Sbjct: 214706 ctccatttggagcacca 214722

 Score = 32.2 bits (16), Expect(7) = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus


Query: 251   agcatcaccatttgga 266
             ||||||||||||||||
Sbjct: 72716 agcatcaccatttgga 72731

 Score = 32.2 bits (16), Expect(7) = 1.3
 Identities = 19/20 (95%)
 Strand = Plus / Plus


Query: 491    atcctcatcctcaactccat 510
              ||||||||||||||| ||||
Sbjct: 214296 atcctcatcctcaacaccat 214315

 Score = 28.2 bits (14), Expect(7) = 1.3
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 541    cttcaactacatca 554
              ||||||||||||||
Sbjct: 214343 cttcaactacatca 214356

 Score = 26.3 bits (13), Expect(7) = 1.3
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 379    catcatcttcaac 391
              |||||||||||||
Sbjct: 213485 catcatcttcaac 213497

 Score = 26.3 bits (13), Expect(7) = 1.3
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 640    cttcaccatttgg 652
              |||||||||||||
Sbjct: 214829 cttcaccatttgg 214841

 Score = 38.2 bits (19), Expect(6) = 1.3
 Identities = 58/71 (81%)
 Strand = Plus / Plus


Query: 552    tcaccatttggagcacctgcagcttcaccttcaccatttggaatacaggcagcctcaccc 611
              ||||||||||||  ||  ||||| ||||| || |||||||||  ||  |||||||||||
Sbjct: 214999 tcaccatttggaatacaggcagcctcaccctctccatttggagcaccagcagcctcacct 215058


Query: 612    tctccatttgg 622
              || ||||||||
Sbjct: 215059 tcaccatttgg 215069

 Score = 34.2 bits (17), Expect(6) = 1.3
 Identities = 17/17 (100%)
 Strand = Plus / Plus


Query: 416    accatttggagcaccaa 432
              |||||||||||||||||
Sbjct: 214884 accatttggagcaccaa 214900

 Score = 32.2 bits (16), Expect(6) = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus


Query: 290    tccatttggagcacca 305
              ||||||||||||||||
Sbjct: 214521 tccatttggagcacca 214536

 Score = 30.2 bits (15), Expect(6) = 1.3
 Identities = 15/15 (100%)
 Strand = Plus / Plus


Query: 324    ccatttggagcacca 338
              |||||||||||||||
Sbjct: 214627 ccatttggagcacca 214641

 Score = 30.2 bits (15), Expect(6) = 1.3
 Identities = 15/15 (100%)
 Strand = Plus / Plus


Query: 467    accatttggagcacc 481
              |||||||||||||||
Sbjct: 214971 accatttggagcacc 214985

 Score = 26.3 bits (13), Expect(6) = 1.3
 Identities = 16/17 (94%)
 Strand = Plus / Plus


Query: 224    atcatctacatcttcaa 240
              ||||||||||| |||||
Sbjct: 138406 atcatctacattttcaa 138422

 Score = 46.1 bits (23), Expect = 2.2
 Identities = 26/27 (96%)
 Strand = Plus / Minus


Query: 118    tgttgaaccaaataatcctgttgatgg 144
              |||||| ||||||||||||||||||||
Sbjct: 213984 tgttgagccaaataatcctgttgatgg 213958

 Score = 44.1 bits (22), Expect = 8.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus


Query: 125    ccaaataatcctgttgatggag 146
              ||||||||||||||||||||||
Sbjct: 213929 ccaaataatcctgttgatggag 213908

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 712,871,416
Number of extensions: 43532354
Number of successful extensions: 3194885
Number of sequences better than 10.0: 60
Length of query: 879
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 855
Effective length of database: 97,308,875,965
Effective search space: 83199088950075
Effective search space used: 83199088950075
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U12135-1 (Contig-U12135-1Q) /CSM_Contig/Contig-U12135-1Q.Seq.d
         (879 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116957_76(AC116957|pid:none) Dictyostelium discoideum chromoso...   115   2e-24
(Q555D2) RecName: Full=Uncharacterized protein DDB_G0274915;          115   2e-24
CP000759_39(CP000759|pid:none) Ochrobactrum anthropi ATCC 49188 ...    40   0.079
CR954204_133(CR954204|pid:none) Ostreococcus tauri strain OTTH05...    39   0.23
AB034690_1(AB034690|pid:none) Drosophila melanogaster mRNA for d...    37   0.67
BC136052_1(BC136052|pid:none) Xenopus tropicalis zinc finger pro...    37   0.87
AE014297_2371(AE014297|pid:none) Drosophila melanogaster chromos...    36   1.5
BT023940_1(BT023940|pid:none) Drosophila melanogaster LP20233 fu...    36   1.5
T30173(T30173) zinc finger protein Pw1 - mouse  &U48804_1(U48804...    36   1.9
(P07897) RecName: Full=Aggrecan core protein; AltName: Full=Cart...    36   1.9
BT058961_1(BT058961|pid:none) Salmo salar clone ssal-rgf-516-164...    36   1.9
L34680_1(L34680|pid:none) Strongylocentrotus purpuratus calcium-...    36   1.9
AY337722_1(AY337722|pid:none) Human herpesvirus 4 isolate Med+ l...    36   1.9
CP000088_361(CP000088|pid:none) Thermobifida fusca YX, complete ...    35   2.5
AB020671_1(AB020671|pid:none) Homo sapiens mRNA for KIAA0864 pro...    35   2.5
CP001365_1700(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4...    35   2.5
X04851_1(X04851|pid:none) Bos taurus mRNA for clathrin light cha...    35   2.5
EF598054_1(EF598054|pid:none) Arabidopsis thaliana ecotype CS679...    35   2.5
CP000113_4911(CP000113|pid:none) Myxococcus xanthus DK 1622, com...    35   2.5
CU633899_133(CU633899|pid:none) Podospora anserina genomic DNA c...    35   3.3
BC118427_1(BC118427|pid:none) Bos taurus clathrin, light polypep...    35   3.3
CP000511_2775(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1...    35   4.3
AM746676_120(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ...    34   5.7
CP000511_3873(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1...    34   5.7
CU633458_8(CU633458|pid:none) Podospora anserina genomic DNA chr...    34   5.7
FJ868726_1(FJ868726|pid:none) Phytophthora sp. MMAM-2009a triose...    34   5.7
CP001365_2059(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4...    34   5.7
(Q54EQ8) RecName: Full=Nuclear pore complex protein Nup98-Nup96;...    34   5.7
AM270302_33(AM270302|pid:none) Aspergillus niger contig An13c008...    34   7.4
(Q62598) RecName: Full=Dentin sialophosphoprotein; Contains:   R...    34   7.4
EF598049_1(EF598049|pid:none) Arabidopsis thaliana ecotype CS671...    34   7.4
CP000155_1765(CP000155|pid:none) Hahella chejuensis KCTC 2396, c...    34   7.4
T23422(T23422) hypothetical protein K07F5.13b - Caenorhabditis e...    34   7.4
AY493818_1(AY493818|pid:none) Human herpesvirus 4 isolate sThai3...    34   7.4
AY493824_1(AY493824|pid:none) Human herpesvirus 4 isolate CD3+10...    34   7.4
U63111_1(U63111|pid:none) Rattus norvegicus dentin phosphoprotei...    34   7.4
EF598042_1(EF598042|pid:none) Arabidopsis thaliana ecotype CS901...    34   7.4
AY493821_1(AY493821|pid:none) Human herpesvirus 4 isolate sThai8...    34   7.4
AY493810_1(AY493810|pid:none) Human herpesvirus 4 isolate cThai9...    34   7.4
AF426978_1(AF426978|pid:none) Human herpesvirus 4 N963-2 latent ...    33   9.7
AF426980_1(AF426980|pid:none) Human herpesvirus 4 N963-4 latent ...    33   9.7
AF163151_1(AF163151|pid:none) Homo sapiens dentin sialophosphopr...    33   9.7
AE014298_1825(AE014298|pid:none) Drosophila melanogaster chromos...    33   9.7
CP001359_3398(CP001359|pid:none) Anaeromyxobacter dehalogenans 2...    33   9.7
A54138(A54138) acidic repetitive protein arp1 - Tetrahymena ther...    33   9.7
AF426975_1(AF426975|pid:none) Human herpesvirus 4 N257-7 latent ...    33   9.7
AF426971_1(AF426971|pid:none) Human herpesvirus 4 N257-1 latent ...    33   9.7
(Q9NZW4) RecName: Full=Dentin sialophosphoprotein; Contains:   R...    33   9.7
AF426977_1(AF426977|pid:none) Human herpesvirus 4 N963-1 latent ...    33   9.7
CP000511_3053(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1...    33   9.7
CP001331_358(CP001331|pid:none) Micromonas sp. RCC299 chromosome...    33   9.7
CR954210_340(CR954210|pid:none) Ostreococcus tauri strain OTTH05...    33   9.7

>AC116957_76(AC116957|pid:none) Dictyostelium discoideum chromosome 2
            map 1685067-2090751 strain AX4, complete sequence.
          Length = 1806

 Score =  115 bits (288), Expect = 2e-24
 Identities = 72/159 (45%), Positives = 72/159 (45%)
 Frame = +3

Query: 264  GAPTSTSSPPFGAPTSASSTPFGAPQISTSSSTNLFGGXXXXXXXXXXXXXXXGAPITXX 443
            GAPTSTSSPPFGAPTSASSTPFGAPQISTSSSTNLFGG               GAPIT
Sbjct: 1641 GAPTSTSSPPFGAPTSASSTPFGAPQISTSSSTNLFGGASSSTAAPSFVSSPFGAPITSS 1700

Query: 444  XXXXXXXLPXXXXXXXXXXXXXXXXXXXXNSMXXXXXXXXXXXXXXXXXXIQXXXXXXXX 623
                   LP                    NSM                  IQ
Sbjct: 1701 SSSSSSSLPFGAPTTSSSSSTPFGASPFGNSMASTTSPFGAPAASPSPFGIQAASPSPFG 1760

Query: 624  XXXXXXXXXXXXXXXXXNPFGNFGAVPANGFSLGKMGTS 740
                             NPFGNFGAVPANGFSLGKMGTS
Sbjct: 1761 APAASPSPFGSTPSTAPNPFGNFGAVPANGFSLGKMGTS 1799

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 916,683,243
Number of extensions: 16410913
Number of successful extensions: 47600
Number of sequences better than 10.0: 52
Number of HSP's gapped: 47064
Number of HSP's successfully gapped: 60
Length of query: 293
Length of database: 1,051,180,864
Length adjustment: 127
Effective length of query: 166
Effective length of database: 640,137,871
Effective search space: 106262886586
Effective search space used: 106262886586
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.75  gvh: 0.50  alm: 0.39  top: 0.53  tms: 0.00  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: cytoplasmic
	 32.0 %: nuclear
	 16.0 %: mitochondrial
	  8.0 %: vacuolar
	  4.0 %: peroxisomal
	  4.0 %: endoplasmic reticulum

>> prediction for Contig-U12135-1 is cyt