| Homology vs DNA |
 Query= Contig-U01890-1 (Contig-U01890-1Q) /CSM_Contig/Contig-U01890-1Q.Seq.d
(1371 letters)
Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(C84142) Dictyostelium discoideum slug cDNA, clone SSC325. 1150 0.0 2
(C91186) Dictyostelium discoideum slug cDNA, clone SSJ789. 535 0.0 4
(C94527) Dictyostelium discoideum slug cDNA, clone SSL164. 531 0.0 2
(AU074203) Dictyostelium discoideum slug cDNA, clone SSJ789. 446 e-120 1
(BG815828) dad74b02.y1 Wellcome CRC pCS107 tropicalis egg Xe... 52 2e-10 3
(AL776455) Xenopus tropicalis EST, clone TNeu070n20 5'. 52 3e-10 3
(DN091116) JGI_CABE4086.rev NIH_XGC_tropOva1 Xenopus (Silura... 52 4e-10 3
(CX844533) JGI_CAAK11655.fwd NIH_XGC_tropBrn3 Xenopus (Silur... 52 6e-10 3
(EL704234) CBSU3854.rev NICHD_XGC_tropLimb_m Xenopus (Silura... 52 6e-10 3
(DT413597) JGI_CABI12006.fwd NIH_XGC_tropOvi1 Xenopus (Silur... 52 8e-10 3
(CT027860) Xenopus tropicalis finished cDNA, clone TEgg006m23. 52 5e-09 3
(EH693300) CCIM5334.b1_L14.ab1 CCI(LMS) chicory Cichorium in... 74 2e-08 1
(BU774144) SJEGDH01 SJE Schistosoma japonicum cDNA similar t... 52 3e-08 2
(FE232169) CAPG1608.rev CAPG Naegleria gruberi amoeba stage ... 66 1e-07 2
(ES391700) MUS12-A14.x1d-t SHGC-MUS Mytilus californianus cD... 64 2e-07 3
(BQ384288) NISC_mn05h05.y1 NICHD_XGC_Ov1 Xenopus laevis cDNA... 52 4e-07 2
(EX475880) EST_lsal_evj_797302 lsalevj mixed_tissue_mixed_st... 48 4e-07 3
(EX475879) EST_lsal_evj_796534 lsalevj mixed_tissue_mixed_st... 48 4e-07 3
(AL865124) Xenopus tropicalis EST, clone TEgg076m08 5'. 52 4e-07 2
(BC073037) Xenopus laevis hypothetical protein LOC443612, mR... 52 8e-07 2
(BC125999) Xenopus laevis hypothetical protein LOC443612, mR... 52 1e-06 2
(EX326292) GQ02825.B7_A20 GQ028 - Cambium / phloem scrapping... 62 4e-06 2
(DR094063) STRR1_12_E07.b1_A033 Stem Response Resistant Pinu... 62 5e-06 2
(CO474648) GQ0045.B3_N06 GQ004: Non-lignified secondary xyle... 62 6e-06 2
(CO166798) FLD1_64_C09.g1_A029 Root flooded Pinus taeda cDNA... 62 7e-06 2
(DT636261) EST1151192 Normalized pine embryo library, Lib_D ... 62 7e-06 2
(CF389775) RTDR2_5_E03.g1_A021 Loblolly pine roots recoverin... 62 7e-06 2
(DR690483) EST1080569 Normalized pine embryo library, Lib_D ... 62 8e-06 2
(CO472880) GQ0045.TB_N08 GQ004: Non-lignified secondary xyle... 62 8e-06 2
(CO481793) GQ0193.TB.1_A18 GQ019: Clean ROOTS systems - P tr... 62 8e-06 2
(AM448410) Vitis vinifera contig VV78X059190.6, whole genome... 64 2e-05 1
(EC946728) WIN0539.C21_I21 Cab Sauv flower, leaf and root no... 64 2e-05 1
(FF526653) G710P5328RG4.T0 Acorn worm normalized juvenile pE... 60 2e-05 2
(CR380958) Candida glabrata strain CBS138 chromosome L compl... 46 5e-05 2
(DY818712) CTOY10713.b1_B16.ab1 CTO(XYZ) dandelion Taraxacum... 62 6e-05 1
(DR743175) RTCU1_14_C08.b1_A029 Roots plus added copper Pinu... 62 6e-05 1
(DR094141) STRR1_12_E07.g1_A033 Stem Response Resistant Pinu... 62 6e-05 1
(CO166728) FLD1_64_C09.b1_A029 Root flooded Pinus taeda cDNA... 62 6e-05 1
(BQ196812) NXLV105_F05_F NXLV (Nsf Xylem Late wood Vertical)... 62 6e-05 1
(EX934501) li97g03.g7 Ginkgo microsporophyll (NYBG) Ginkgo b... 62 6e-05 1
(EX444926) GQ04112.B7_D11 GQ041 - Shoot tip - Dormant (Norma... 62 6e-05 1
(EX326596) GQ02825.SP6_A20 GQ028 - Cambium / phloem scrappin... 62 6e-05 1
(FK908043) EST_lsal_evj_932496 lsalevj mixed_tissue_mixed_st... 42 1e-04 3
(AC173712) Strongylocentrotus purpuratus clone R3-3008A5, WO... 40 2e-04 2
(DU695026) Bst027556 lambda03 Boechera stricta genomic clone... 60 2e-04 1
(DU686915) Bst019451 lambda03 Boechera stricta genomic clone... 60 2e-04 1
(DU675880) Bst008422 lambda03 Boechera stricta genomic clone... 60 2e-04 1
(DU669212) Bst001754 lambda03 Boechera stricta genomic clone... 60 2e-04 1
(ES269539) JKBNM4_T7_001_A03_10FEB2004_031 JKBNM4 Brassica n... 60 2e-04 1
(BJ365925) Dictyostelium discoideum cDNA clone:ddc37g04, 5' ... 32 3e-04 3
(AY167012) Cannabis sativa microsatellite ANUCS306 sequence. 34 3e-04 3
(AC094116) Rattus norvegicus clone CH230-2N24, *** SEQUENCIN... 42 7e-04 2
(AC207082) Pongo abelii BAC clone CH276-89I20 from chromosom... 38 7e-04 2
(AC177158) Strongylocentrotus purpuratus clone R3-4015D24, W... 46 7e-04 2
(AC176615) Strongylocentrotus purpuratus clone R3-3079L21, W... 42 7e-04 2
(BW993293) Cryptomeria japonica cDNA, clone: CC10848, 5' end... 58 0.001 1
(FF556336) MOPF396TF MOP Vigna unguiculata cDNA 5', mRNA seq... 52 0.001 2
(AC135270) Rattus norvegicus clone CH230-175P2, *** SEQUENCI... 38 0.003 2
(AC094998) Rattus norvegicus clone CH230-6D13, WORKING DRAFT... 40 0.003 2
(AC094996) Rattus norvegicus clone CH230-6F15, *** SEQUENCIN... 40 0.003 2
(AC097302) Rattus norvegicus clone CH230-171L18, *** SEQUENC... 38 0.003 2
(AC118081) Rattus norvegicus clone CH230-365E12, *** SEQUENC... 38 0.003 2
(AC181595) Strongylocentrotus purpuratus clone R3-1109B3, WO... 40 0.003 2
(AC180313) Strongylocentrotus purpuratus clone R3-3118P20, W... 40 0.003 2
(AC176489) Strongylocentrotus purpuratus clone R3-307108, WO... 42 0.003 2
(AC175947) Strongylocentrotus purpuratus clone R3-17C6, WORK... 40 0.003 2
(AC174733) Strongylocentrotus purpuratus clone R3-3071D8, WO... 42 0.003 2
(AC116947) Tetraodon nigroviridis clone GSTNB-2P20, WORKING ... 38 0.003 2
(AC176037) Strongylocentrotus purpuratus clone R3-18I8, WORK... 40 0.003 2
(AC135546) Tetraodon nigroviridis clone GSTNB-12I17, WORKING... 38 0.003 2
(AC181646) Strongylocentrotus purpuratus clone R3-1101A12, W... 42 0.003 2
(BV383300) S244P6224FF12.T0 AlaskaGrayWolf Canis lupus STS g... 38 0.003 2
(DN312577) PL06013A2C05 cDNA from juvenile hermaphodites Sch... 56 0.004 1
(EX136140) BR119970 root cDNA library KHRT Brassica rapa sub... 56 0.004 1
(EX064187) BR048831 etiolated mature leaf cDNA library KBLW ... 56 0.004 1
(EX064141) BR048785 etiolated mature leaf cDNA library KBLW ... 56 0.004 1
(EX056607) BR041251 salt-treated whole plant cDNA library KB... 56 0.004 1
(AM735799) Cucumis melo subsp. melo EST, clone CI_20-G07-M13R. 42 0.005 3
(FC401843) CAYZ24809.fwd CAYZ Physcomitrella patens subsp. p... 54 0.005 2
(BJ610161) Physcomitrella patens subsp. patens cDNA clone:pp... 54 0.005 2
(DR384733) RTHG1_4_F01.b1_A029 Roots plus added mercury Pinu... 38 0.005 4
(BJ954389) Physcomitrella patens subsp. patens cDNA clone:pp... 54 0.005 2
(FC424066) CAYZ6538.rev CAYZ Physcomitrella patens subsp. pa... 54 0.005 2
(FC401842) CAYZ24809.rev CAYZ Physcomitrella patens subsp. p... 54 0.005 2
(FC353842) CAYY28497.fwd CAYY Physcomitrella patens subsp. p... 54 0.005 2
(FC327659) CAYY11055.rev CAYY Physcomitrella patens subsp. p... 54 0.005 2
(BY947858) Physcomitrella patens subsp. patens cDNA clone: P... 54 0.005 2
(AC168502) Strongylocentrotus purpuratus clone R3-3117D16, W... 36 0.010 2
(CU942406) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 0.010 2
(AC181155) Strongylocentrotus purpuratus clone R3-16C24, WOR... 38 0.010 2
(AC114890) Canis lupus familiaris clone RP81-411G22, WORKING... 38 0.010 2
(AC201451) Strongylocentrotus purpuratus clone R3-3031E2, WO... 38 0.010 2
(FP102066) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 0.010 2
(AC181749) Strongylocentrotus purpuratus clone R3-1036P18, W... 38 0.010 2
(AC164078) Mus musculus chromosome 3, clone RP23-123C15, com... 40 0.010 2
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 48 0.010 2
(AC113570) Canis lupus familiaris clone RP81-347P8, WORKING ... 38 0.010 2
(AC121149) Mus musculus chromosome 3, clone RP24-383A4, comp... 40 0.010 2
(AC180971) Strongylocentrotus purpuratus clone R3-3059C09, W... 38 0.010 2
(AC179357) Strongylocentrotus purpuratus clone R3-59F5, WORK... 38 0.010 2
(AC178864) Strongylocentrotus purpuratus clone R3-26L5, WORK... 38 0.010 2
(AC179954) Strongylocentrotus purpuratus clone R3-20M16, WOR... 42 0.010 2
(AC172313) Strongylocentrotus purpuratus clone R3-14A4, WORK... 38 0.010 2
(AC180814) Strongylocentrotus purpuratus clone R3-3071M24, W... 38 0.010 2
(AC177154) Strongylocentrotus purpuratus clone R3-4015B18, W... 38 0.010 2
(AC168571) Strongylocentrotus purpuratus clone R3-3065M21, W... 36 0.010 2
(AC177610) Strongylocentrotus purpuratus clone R3-1023J22, W... 38 0.010 2
(AC177759) Strongylocentrotus purpuratus clone R3-1005K13, W... 38 0.010 2
(AC176003) Strongylocentrotus purpuratus clone R3-3028F18, W... 36 0.010 2
(AC181961) Strongylocentrotus purpuratus clone R3-1002H24, W... 38 0.010 2
(AC184205) Strongylocentrotus purpuratus clone R3-32L5, WORK... 38 0.010 2
(AC167315) Sorex araneus clone SA_Ba-487A14, WORKING DRAFT S... 42 0.010 2
(AC201548) Strongylocentrotus purpuratus clone R3-3110L15, W... 38 0.010 2
(AC178784) Strongylocentrotus purpuratus clone R3-21G15, WOR... 40 0.010 2
(AC180106) Strongylocentrotus purpuratus clone R3-3002O19, W... 38 0.011 2
(EH478890) FDR103-P00060-DEPE-R_D01 FDR103 Danio rerio cDNA ... 44 0.012 2
(DQ155414) Pachygrapsus marmoratus clone pm-108 microsatelli... 30 0.012 3
(FD977552) RR3H566JQ RR3(NY) Raphanus raphanistrum subsp. ra... 42 0.012 2
(BJ435406) Dictyostelium discoideum cDNA clone:ddv27d04, 3' ... 42 0.012 2
(BJ341398) Dictyostelium discoideum cDNA clone:dda6b17, 3' e... 42 0.012 2
(BJ428268) Dictyostelium discoideum cDNA clone:ddv11g10, 3' ... 42 0.012 2
(EB953502) 9733498 ZF35 Danio rerio cDNA clone 3425281, mRNA... 44 0.012 2
(AU262895) Dictyostelium discoideum vegetative cDNA clone:VS... 42 0.012 2
(EB957744) 9693904 ZF35 Danio rerio cDNA clone 3430590, mRNA... 44 0.012 2
(BJ342041) Dictyostelium discoideum cDNA clone:dda9c11, 3' e... 42 0.012 2
(BI671027) fp59f11.x1 Zebrafish adult retina cDNA Danio reri... 44 0.013 2
(EB958643) 11723937 ZF35 Danio rerio cDNA clone 3435943, mRN... 44 0.013 2
(AZ161703) SP_0070_A2_G11_T7A Strongylocentrotus purpuratus,... 38 0.013 2
(BI671084) fp60f09.x1 Zebrafish adult retina cDNA Danio reri... 44 0.013 2
(EK766629) 1093017103857 Global-Ocean-Sampling_GS-33-01-01-1... 38 0.013 2
(AP004940) Lotus japonicus genomic DNA, chromosome 3, clone:... 54 0.015 1
(AC146308) Medicago truncatula clone mth2-10a12, complete se... 54 0.015 1
(AC201479) Strongylocentrotus purpuratus clone R3-3055M19, W... 54 0.015 1
(EG030587) AH0957 Shanyou 523 Peanut Cotyledon cDNA Library ... 54 0.015 1
(EC769094) EST 5590 Guarana fruits cDNA library Paullinia cu... 54 0.015 1
(CX641094) UCRPT02_50F12_b Poncirus trifoliata Roots with Ir... 54 0.015 1
(CF442160) EST678505 normalized cDNA library of onion Allium... 54 0.015 1
(BI308616) EST530026 GPOD Medicago truncatula cDNA clone pGP... 54 0.015 1
(BG451466) NF110C04DT1F1024 Drought Medicago truncatula cDNA... 54 0.015 1
(FC364182) CAYY35215.fwd CAYY Physcomitrella patens subsp. p... 54 0.015 1
(EY752562) CS00-C5-003-075-B03-CT.F Sweet orange flower, gre... 54 0.015 1
(EY731645) CS00-C3-704-046-A05-CT.F Sweet orange fruit, deve... 54 0.015 1
(FC749310) CBBI4445.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 52 0.020 2
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 30 0.027 3
(AE014297) Drosophila melanogaster chromosome 3R, complete s... 38 0.028 2
(AC168527) Strongylocentrotus purpuratus clone R3-3091P24, W... 42 0.036 2
(AC184633) Strongylocentrotus purpuratus clone R3-1007J9, WO... 38 0.036 2
(AC128430) Rattus norvegicus clone CH230-108A8, WORKING DRAF... 40 0.036 2
(AC179678) Strongylocentrotus purpuratus clone R3-60A5, WORK... 46 0.036 2
(AC121373) Rattus norvegicus clone CH230-206B23, WORKING DRA... 40 0.036 2
(AC180090) Strongylocentrotus purpuratus clone R3-3001I05, W... 40 0.037 2
(AC184642) Strongylocentrotus purpuratus clone R3-1031N8, WO... 38 0.037 2
(AC184432) Strongylocentrotus purpuratus clone R3-3090B11, W... 36 0.037 2
(AC178828) Strongylocentrotus purpuratus clone R3-25J14, WOR... 46 0.037 2
(AC150386) Branchiostoma floridae clone CH302-103G16, comple... 38 0.037 2
(AC176416) Strongylocentrotus purpuratus clone R3-12I3, WORK... 38 0.037 2
(AC177495) Strongylocentrotus purpuratus clone R3-61O1, WORK... 38 0.037 2
(AC176998) Strongylocentrotus purpuratus clone R3-37A3, WORK... 36 0.037 2
(AC178008) Strongylocentrotus purpuratus clone R3-3052M05, W... 36 0.037 2
(AC007827) Drosophila melanogaster, chromosome 3R, region 98... 38 0.037 2
(AC184218) Strongylocentrotus purpuratus clone R3-3058P19, W... 36 0.037 2
(AC180130) Strongylocentrotus purpuratus clone R3-4007B14, W... 42 0.037 2
(AC181941) Strongylocentrotus purpuratus clone R3-1008L12, W... 42 0.037 2
(AL732391) Mouse DNA sequence from clone RP23-364H13 on chro... 38 0.037 2
(AC179704) Strongylocentrotus purpuratus clone R3-1021J15, W... 38 0.037 2
(AC177018) Strongylocentrotus purpuratus clone R3-37I10, WOR... 36 0.037 2
(AC006170) Drosophila melanogaster, chromosome 3R, region 98... 38 0.037 2
(AC131447) Strongylocentrotus purpuratus clone Sp154N12, ***... 36 0.037 2
(AC178272) Strongylocentrotus purpuratus clone R3-1116B15, W... 36 0.037 2
(AC176910) Strongylocentrotus purpuratus clone R3-1104N16, W... 40 0.037 2
(AC179832) Strongylocentrotus purpuratus clone R3-1012E3, WO... 38 0.037 2
(AC168515) Strongylocentrotus purpuratus clone R3-3108I21, W... 36 0.037 2
(AC180560) Strongylocentrotus purpuratus clone R3-3016L11, W... 38 0.037 2
(AC168391) Strongylocentrotus purpuratus clone R3-4002N23, W... 38 0.037 2
(AC184398) Strongylocentrotus purpuratus clone R3-3113E7, WO... 38 0.037 2
(AC181624) Strongylocentrotus purpuratus clone R3-1105J9, WO... 36 0.037 2
(AC168556) Strongylocentrotus purpuratus clone R3-3091F9, WO... 38 0.037 2
(AC008660) Homo sapiens chromosome 5 clone CTB-27N1, complet... 38 0.037 2
(AC179381) Strongylocentrotus purpuratus clone R3-59O7, WORK... 42 0.037 2
(AC184245) Strongylocentrotus purpuratus clone R3-3003K16, W... 38 0.037 2
(AC178321) Strongylocentrotus purpuratus clone R3-1114L16, W... 36 0.037 2
(AC175970) Strongylocentrotus purpuratus clone R3-3035E4, WO... 38 0.037 2
(BX255908) Zebrafish DNA sequence from clone CH211-250O16 in... 38 0.037 2
(AC181432) Strongylocentrotus purpuratus clone R3-1111P23, W... 42 0.038 2
(AC177025) Strongylocentrotus purpuratus clone R3-1038J21, W... 38 0.038 2
(AC104634) Homo sapiens BAC clone RP11-793L24 from 2, comple... 36 0.038 2
(AC177228) Strongylocentrotus purpuratus clone R3-1034I19, W... 36 0.038 2
(AC157968) Strongylocentrotus purpuratus clone R3-4002N23, W... 38 0.038 2
(AC177145) Strongylocentrotus purpuratus clone R3-1035H2, WO... 38 0.038 2
(AC180918) Strongylocentrotus purpuratus clone R3-3063E24, W... 36 0.038 2
(AC093446) Mus musculus strain 129Sv/CJ7 clone ct7-201l18, c... 38 0.038 2
(AC178192) Strongylocentrotus purpuratus clone R3-1116K10, W... 38 0.038 2
(AC179607) Strongylocentrotus purpuratus clone R3-1028M9, WO... 40 0.038 2
(AC177014) Strongylocentrotus purpuratus clone R3-1038L19, W... 38 0.038 2
(AC173642) Strongylocentrotus purpuratus clone R3-3001K20, W... 36 0.038 2
(AC168719) Strongylocentrotus purpuratus clone R3-3010P7, WO... 36 0.039 2
(AC017362) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 38 0.040 2
(GC700733) Sequence 15978 from patent US 6812339. 38 0.042 2
(GC697444) Sequence 12689 from patent US 6812339. 38 0.042 2
(DY891200) CeleSEQ7874 Cunninghamella elegans pBluescript (E... 30 0.043 3
(DY891592) CeleSEQ10323 Cunninghamella elegans pBluescript (... 30 0.043 3
(BC134880) Danio rerio apoptosis antagonizing transcription ... 38 0.045 2
(BC124108) Danio rerio apoptosis antagonizing transcription ... 38 0.045 2
(BC116503) Danio rerio apoptosis antagonizing transcription ... 38 0.045 2
(EA311709) Sequence 38 from patent US 7291767. 38 0.045 2
(AX366119) Sequence 38 from Patent WO0208411. 38 0.045 2
(AX364031) Sequence 38 from Patent WO0208410. 38 0.045 2
(EI853879) CAH1-21M11TR CAA1Ba Cicer arietinum genomic clone... 42 0.046 2
(EE719454) AGENCOURT_87973959 NIH_ZGC_26 Danio rerio cDNA cl... 38 0.046 2
(EH436143) FDR103-P00013-DEPE-F_F01 FDR103 Danio rerio cDNA ... 38 0.046 2
(CT612503) Danio rerio EST, clone ZF_mu_2o20 5'. 38 0.046 2
(CT641062) Danio rerio EST, clone ZF_mu_139h04 5'. 38 0.046 2
(EY356516) CAWZ4399.fwd CAWZ Helobdella robusta Primary Late... 38 0.046 2
(CT731725) Danio rerio EST, clone ZF_mu_225g04 5'. 38 0.046 2
(EY648068) CAWW9237.fwd CAWW Capitella sp. I ECS-2004 Subtra... 36 0.046 2
(FK715157) pl_test1-E7 Ilyanassa (snail) 0-48h Ilyanassa obs... 42 0.046 2
(CT677142) Danio rerio EST, clone ZF_mu_170o19 3'. 38 0.046 2
(AL218824) Tetraodon nigroviridis genome survey sequence T7 ... 36 0.046 2
(EY357786) CAWZ5438.rev CAWZ Helobdella robusta Primary Late... 40 0.046 2
(DV594943) AGENCOURT_61900002 NIH_ZGC_14 Danio rerio cDNA cl... 38 0.046 2
(CT679282) Danio rerio EST, clone ZF_mu_195d24 5'. 38 0.046 2
(CT648946) Danio rerio EST, clone ZF_mu_99m20 5'. 38 0.047 2
(CT589650) Danio rerio EST, clone ZF_mu_20m10 5'. 38 0.047 2
(BM860082) fy34a08.y1 Sugano SJD adult male Danio rerio cDNA... 38 0.047 2
(BM182769) fv61f04.y1 Sugano SJD adult male Danio rerio cDNA... 38 0.047 2
(EU910150) Tegillarca granosa clone T26E2 microsatellite seq... 36 0.048 2
(AJ507775) Myrmica scabrinodis microsatellite DNA, clone sca78. 36 0.048 2
(EB849437) 7215809 KZ68 Danio rerio cDNA clone 2681554, mRNA... 38 0.049 2
(AC175958) Strongylocentrotus purpuratus clone R3-3035L09, W... 52 0.058 1
(AY814282) Schistosoma japonicum SJCHGC04863 protein mRNA, c... 52 0.058 1
(BH478581) BOGQK95TF BOGQ Brassica oleracea genomic clone BO... 52 0.058 1
(CU937387) Brassica napus GSS, clone JBnB071B11, end read, p... 52 0.058 1
(EE553360) BNQA_UP_089_B08_01JUN2005_062 Brassica napus BNQA... 52 0.058 1
(DY023970) 53COT5_T3_017_H12_04SEP2004_082 Brassica napus 36... 52 0.058 1
(DT442196) JGI_CABK4151.rev NIH_XGC_tropSpl1 Xenopus (Silura... 52 0.058 1
(CX879368) JGI_CAAL19573.fwd NIH_XGC_tropBrn4 Xenopus (Silur... 52 0.058 1
(CX414560) JGI_XZT5466.fwd NIH_XGC_tropTad5 Xenopus (Siluran... 52 0.058 1
(CV671919) RE-3-SJ-L_E09_RE-3-SJ-LE09-T7 Schistosoma japonic... 52 0.058 1
(CN629521) taf39g06.x1 Hydra EST Darmstadt I Hydra magnipapi... 52 0.058 1
(BU777208) SJEDHE12 SJE Schistosoma japonicum cDNA similar t... 52 0.058 1
(BU771020) SJEDSD09 SJE Schistosoma japonicum cDNA similar t... 52 0.058 1
(GE595701) CCPW4365.b1_J11.ab1 CCP(UWX) Globe Artichoke Cyna... 52 0.058 1
(EV214374) 0186195 Brassica napus Leaf - drought Brassica na... 52 0.058 1
(EV214165) 0185986 Brassica napus Leaf - drought Brassica na... 52 0.058 1
(EV119409) 0124721 Brassica napus Root library Brassica napu... 52 0.058 1
(EV058820) BNSCS3CT_UP_276_E10_19MAY2007_072 Brassica napus ... 52 0.058 1
(EV039042) BNSCS2CT_UP_321_C03_29MAY2007_027 Brassica napus ... 52 0.058 1
(EV035023) BNSCS2CT_UP_264_H03_03MAY2007_017 Brassica napus ... 52 0.058 1
(EV027511) BNSCS2CT_UP_160_D07_27APR2007_057 Brassica napus ... 52 0.058 1
(AC099297) Rattus norvegicus clone CH230-227A15, WORKING DRA... 38 0.13 2
(AC099366) Rattus norvegicus clone CH230-95O16, *** SEQUENCI... 38 0.13 2
(CR954962) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 0.13 2
(AC097561) Rattus norvegicus clone CH230-161A18, WORKING DRA... 36 0.13 2
(AC121446) Rattus norvegicus clone CH230-116M21, *** SEQUENC... 38 0.13 2
(AC099299) Rattus norvegicus clone CH230-50D6, *** SEQUENCIN... 38 0.13 2
(AC180829) Strongylocentrotus purpuratus clone R3-3071E19, W... 36 0.13 2
(AC130173) Rattus norvegicus clone CH230-11D24, *** SEQUENCI... 36 0.13 2
(AC128579) Rattus norvegicus clone CH230-72A11, *** SEQUENCI... 38 0.13 2
(AC096843) Rattus norvegicus clone CH230-2K10, *** SEQUENCIN... 38 0.13 2
(AC124205) Rattus norvegicus clone CH230-102H1, WORKING DRAF... 38 0.13 2
(AC125909) Rattus norvegicus clone CH230-100N7, WORKING DRAF... 36 0.13 2
(AC127191) Rattus norvegicus clone CH230-41B15, WORKING DRAF... 38 0.13 2
(AC129679) Rattus norvegicus clone CH230-112K2, *** SEQUENCI... 38 0.13 2
(EF710657) Glyptapanteles indiensis clone BAC 2C5; BAC 1C20,... 38 0.13 2
(AC172403) Strongylocentrotus purpuratus clone R3-14L2, WORK... 38 0.13 2
(AL928564) Mouse DNA sequence from clone RP23-255J22 on chro... 36 0.13 2
(AC177183) Strongylocentrotus purpuratus clone R3-4018G10, W... 36 0.13 2
(AC178539) Strongylocentrotus purpuratus clone R3-3031E4, WO... 36 0.13 2
(AC106432) Rattus norvegicus clone CH230-188I13, WORKING DRA... 38 0.13 2
(AC116223) Rattus norvegicus clone CH230-276N14, *** SEQUENC... 36 0.13 2
(AC128082) Rattus norvegicus clone CH230-362C16, WORKING DRA... 36 0.13 2
(AC006560) Homo sapiens 12 BAC RPCI11-792F18 (Roswell Park C... 34 0.14 2
(AC179831) Strongylocentrotus purpuratus clone R3-1012E24, W... 36 0.14 2
(AC111505) Rattus norvegicus clone CH230-131N9, WORKING DRAF... 38 0.14 2
(AC178854) Strongylocentrotus purpuratus clone R3-28N2, WORK... 38 0.14 2
(AC207716) Pongo abelii BAC clone CH276-16F9 from chromosome... 38 0.14 2
(AC184199) Strongylocentrotus purpuratus clone R3-3032O21, W... 38 0.14 2
(AC007539) Homo sapiens 12 BAC RCPI11-935C2 (Roswell Park Ca... 34 0.14 2
(AC184478) Strongylocentrotus purpuratus clone R3-1110P8, WO... 40 0.14 2
(AC069497) Homo sapiens chromosome 4 clone RP11-774O3 map 4,... 36 0.14 2
(AC120268) Rattus norvegicus clone CH230-468H3, WORKING DRAF... 36 0.14 2
(AC105799) Rattus norvegicus clone CH230-256I6, *** SEQUENCI... 36 0.14 2
(AC173980) Strongylocentrotus purpuratus clone R3-14E12, WOR... 34 0.14 2
(CU640418) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 0.14 2
(AC201175) Strongylocentrotus purpuratus clone R3-14M2, WORK... 38 0.14 2
(AC176685) Strongylocentrotus purpuratus clone R3-3088D24, W... 34 0.14 2
(AC180111) Strongylocentrotus purpuratus clone R3-4007H13, W... 38 0.14 2
(AC149957) Strongylocentrotus purpuratus clone R3-32B13, WOR... 34 0.14 2
(AC168645) Strongylocentrotus purpuratus clone R3-3017K16, W... 36 0.14 2
(AC180017) Strongylocentrotus purpuratus clone R3-23H22, WOR... 40 0.14 2
(BX511094) Zebrafish DNA sequence from clone CH211-137G12 in... 38 0.14 2
(AC174118) Strongylocentrotus purpuratus clone R3-36N2, WORK... 34 0.14 2
(AC176966) Strongylocentrotus purpuratus clone R3-34M16, WOR... 38 0.14 2
(AC181499) Strongylocentrotus purpuratus clone R3-57C11, WOR... 40 0.14 2
(AC179383) Strongylocentrotus purpuratus clone R3-1101L14, W... 38 0.14 2
(AC173357) Strongylocentrotus purpuratus clone R3-1008N4, WO... 36 0.14 2
(AC178048) Strongylocentrotus purpuratus clone R3-1117F11, W... 38 0.14 2
(AC179524) Strongylocentrotus purpuratus clone R3-1035D21, W... 38 0.14 2
(AC168465) Strongylocentrotus purpuratus clone R3-35D17, WOR... 38 0.14 2
(AC104825) Homo sapiens BAC clone RP11-774O3 from 4, complet... 36 0.14 2
(AC180351) Strongylocentrotus purpuratus clone R3-3118A14, W... 36 0.14 2
(AC180329) Strongylocentrotus purpuratus clone R3-3118H5, WO... 34 0.14 2
(AC184248) Strongylocentrotus purpuratus clone R3-3052I11, W... 36 0.14 2
(AC180676) Strongylocentrotus purpuratus clone R3-3087K19, W... 38 0.14 2
(AC176192) Strongylocentrotus purpuratus clone R3-3063P7, WO... 36 0.14 2
(AC234739) Brassica rapa subsp. pekinensis chromosome Linkag... 40 0.14 2
(AC177288) Strongylocentrotus purpuratus clone R3-1033F10, W... 38 0.14 2
(AC176590) Strongylocentrotus purpuratus clone R3-3077L03, W... 36 0.14 2
(AC181633) Strongylocentrotus purpuratus clone R3-1104O14, W... 34 0.14 2
(AL928618) Zebrafish DNA sequence from clone CH211-10O8. 38 0.14 2
(AC176046) Strongylocentrotus purpuratus clone R3-18L19, WOR... 36 0.14 2
(AC177670) Strongylocentrotus purpuratus clone R3-1017I11, W... 34 0.14 2
(AC177427) Strongylocentrotus purpuratus clone R3-54L12, WOR... 38 0.14 2
(AC180663) Strongylocentrotus purpuratus clone R3-3089J07, W... 36 0.14 2
(AC201064) Strongylocentrotus purpuratus clone R3-12P4, WORK... 38 0.14 2
(AB023032) Arabidopsis thaliana genomic DNA, chromosome 5, T... 34 0.14 2
(CU013536) Zebrafish DNA sequence from clone CH73-226G21 in ... 38 0.15 2
(EU001246) Glyptapanteles indiensis bracovirus segment 14, c... 38 0.15 2
(FB899969) Sequence 119242 from Patent WO2008034648. 34 0.17 2
(FB831196) Sequence 50469 from Patent WO2008034648. 34 0.17 2
(GM965995) Sequence 1327 from Patent WO2008142036. 34 0.17 2
(EY713658) CS00-C3-702-033-D12-CT.F Sweet orange fruit, deve... 36 0.17 2
(EJ201775) 1092344307295 Global-Ocean-Sampling_GS-27-01-01-1... 38 0.17 2
(EY371539) CAXA13499.fwd CAXA Helobdella robusta Subtracted ... 38 0.17 2
(CX666603) UCRCP01_024_C11_T3 Swingle citrumelo nematode-cha... 36 0.17 2
(CX666604) UCRCP01_024_C11_T7 Swingle citrumelo nematode-cha... 36 0.17 2
(EY854169) CG32-C1-003-043-B04-CT.F Mexican lime leaf, green... 36 0.17 2
(EY725324) CS00-C3-703-005-F12-CT.F Sweet orange fruit, deve... 36 0.17 2
(EY740731) CS00-C3-705-076-B07-CT.F Sweet orange fruit, deve... 36 0.17 2
(EY760811) CR05-C1-100-032-A03-CT.F Mandarin leaf, greenhous... 36 0.17 2
(EY324738) CAWY10469.fwd CAWY Helobdella robusta Subtracted ... 34 0.17 2
(EY327203) CAWY12459.fwd CAWY Helobdella robusta Subtracted ... 34 0.17 2
(GE213163) C26 'BH' (somaclonal variated plants of Skaggs Bo... 36 0.17 2
(EY331539) CAWY4242.rev CAWY Helobdella robusta Subtracted E... 38 0.17 2
(AF375008) Oncorhynchus mykiss microsatellite OMM1004 sequence. 38 0.17 2
(FD534105) RR1F357TF RR1(CS) Raphanus raphanistrum subsp. ma... 38 0.17 2
(CJ896989) Triticum aestivum cDNA clone:whthkles11i02, 5' end. 38 0.17 2
(EB912072) 10888615 ZF31 Danio rerio cDNA clone 3263071, mRN... 38 0.18 2
(BH328754) CH230-188I13.TV CHORI-230 Segment 1 Rattus norveg... 38 0.18 2
(AZ154696) SP_0045_A1_F05_T7 Strongylocentrotus purpuratus, ... 34 0.18 2
(BJ329337) Dictyostelium discoideum cDNA clone:dda24i16, 5' ... 40 0.18 2
(CD867279) AZO2.105N21F001108 AZO2 Triticum aestivum cDNA cl... 38 0.18 2
(CQ337787) Sequence 11881 from Patent WO0157275. 34 0.18 2
(CQ300464) Sequence 11569 from Patent WO0186003. 34 0.18 2
(CQ263394) Sequence 11655 from Patent WO0157277. 34 0.18 2
(CQ225403) Sequence 12242 from Patent WO0157273. 34 0.18 2
(CQ177624) Sequence 9020 from Patent WO0157274. 34 0.18 2
(CQ142127) Sequence 12149 from Patent WO0157276. 34 0.18 2
(CQ103291) Sequence 12150 from Patent WO0157272. 34 0.18 2
(CQ072482) Sequence 8282 from Patent WO0157278. 34 0.18 2
(CQ350361) Sequence 24455 from Patent WO0157275. 34 0.18 2
(CQ312809) Sequence 23914 from Patent WO0186003. 34 0.18 2
(CQ275821) Sequence 24082 from Patent WO0157277. 34 0.18 2
(CQ238227) Sequence 25066 from Patent WO0157273. 34 0.18 2
(CQ187418) Sequence 18814 from Patent WO0157274. 34 0.18 2
(CQ154986) Sequence 25008 from Patent WO0157276. 34 0.18 2
(CQ116261) Sequence 25120 from Patent WO0157272. 34 0.18 2
(CQ081598) Sequence 17398 from Patent WO0157278. 34 0.18 2
(CV794040) Mdfrt3113o07.y1 Mdfrt Malus x domestica cDNA clon... 36 0.18 2
(BM342107) fw86g05.x1 Gong zebrafish testis Danio rerio cDNA... 38 0.18 2
(EB921151) 9179817 ZF31 Danio rerio cDNA clone 3255599, mRNA... 38 0.18 2
(FJ262378) Mizuhopecten yessoensis clone HLJX-122 microsatel... 34 0.18 2
(AM927377) Carassius auratus EST, clone cdn15P0011C12, 5'-en... 36 0.19 2
(CG127951) PUIKR46TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 48 0.22 2
(AL808112) Mouse DNA sequence from clone RP23-57N22 on chrom... 50 0.23 1
(AC176145) Strongylocentrotus purpuratus clone R3-2E7, WORKI... 50 0.23 1
(FH963525) CHO_OF6778xi13f1.ab1 CHO_OF6 Nicotiana tabacum ge... 50 0.23 1
(FH025582) CHO_OF3250xk18r1.ab1 CHO_OF3 Nicotiana tabacum ge... 50 0.23 1
(DY965230) CLSM16127.b1_N24.ab1 CLS(LMS) lettuce sativa Lact... 50 0.23 1
(DV712810) CGN-61955 Cherry of Early Development Stage Coffe... 50 0.23 1
(DV712319) CGN-61349 Cherry of Early Development Stage Coffe... 50 0.23 1
(DV710013) CGN-58457 Cherry of Early Development Stage Coffe... 50 0.23 1
(DV709834) CGN-58236 Cherry of Early Development Stage Coffe... 50 0.23 1
(DV705115) CGN-52078 Cherry of Early Development Stage Coffe... 50 0.23 1
(DV704837) CGN-51732 Cherry of Early Development Stage Coffe... 50 0.23 1
(CX459672) JGI_XZG28297.fwd NIH_XGC_tropGas7 Xenopus (Silura... 50 0.23 1
(CN629788) taf39g06.y1 Hydra EST Darmstadt I Hydra magnipapi... 50 0.23 1
(CF589123) CA-H11_01_H07 Coffee SSH library 1 Coffea arabica... 50 0.23 1
(CD121889) ME1-0070P-V173-B05-U.B ME1-0070 Schistosoma manso... 50 0.23 1
(GE540538) CCHS26970.b1_C23.ab1 CCHS Espina Barnadesia spino... 50 0.23 1
(FF596988) BG03026A2C02.r1 BG03- primary and normalized libr... 42 0.24 2
(FE386932) CBNT4865.rev CBNT_Daphnia_pulex_Chosen_One_Librar... 46 0.24 2
(EX815754) CBNA4693.rev CBNA Phycomyces blakesleeanus NRRL15... 48 0.25 2
(FD507297) Pam01b_89_D10_C013.g1 Persea americana flower bud... 46 0.26 2
(FF596987) BG03026A2C02.f1 BG03- primary and normalized libr... 42 0.27 2
(FE307596) CANS875.fwd CANS_Daphnia_pulex_Log50_Library_3 Da... 46 0.27 2
(FE680713) Pv044A_M13F_H11.ab1 Phaseolus vulgaris cv Early g... 44 0.28 2
(FE680711) Pv044A_M13R_H11.ab1 Phaseolus vulgaris cv Early g... 44 0.30 2
(DT398568) JGI_CABI2300.rev NIH_XGC_tropOvi1 Xenopus (Silura... 42 0.30 2
(DY886115) CeleSEQ1640 Cunninghamella elegans pBluescript (E... 46 0.32 2
(BX687966) Xenopus tropicalis EST, clone TNeu070n20 3'. 42 0.33 2
(BX770463) Xenopus tropicalis EST, clone TEgg040d19 3'. 42 0.33 2
(G29268) human STS SHGC-17389, sequence tagged site. 46 0.35 2
(CQ344958) Sequence 19052 from Patent WO0157275. 44 0.38 2
(CQ308147) Sequence 19252 from Patent WO0186003. 44 0.38 2
(CQ270849) Sequence 19110 from Patent WO0157277. 44 0.38 2
(CQ232833) Sequence 19672 from Patent WO0157273. 44 0.38 2
(CQ184354) Sequence 15750 from Patent WO0157274. 44 0.38 2
(CQ149550) Sequence 19572 from Patent WO0157276. 44 0.38 2
(CQ110809) Sequence 19668 from Patent WO0157272. 44 0.38 2
(CQ079239) Sequence 15039 from Patent WO0157278. 44 0.38 2
(AC176027) Strongylocentrotus purpuratus clone R3-3024L21, W... 46 0.43 3
(AC165428) Strongylocentrotus purpuratus BAC clone contig co... 38 0.46 2
(AC095084) Rattus norvegicus clone CH230-7C22, *** SEQUENCIN... 34 0.47 2
(AC111622) Rattus norvegicus clone CH230-125G14, *** SEQUENC... 34 0.47 2
(AC108692) Homo sapiens chromosome 3 clone RP11-421F3, WORKI... 34 0.48 2
(AC095085) Rattus norvegicus clone CH230-7C23, *** SEQUENCIN... 34 0.48 2
(AC109956) Rattus norvegicus clone CH230-310L11, WORKING DRA... 38 0.48 2
(AC178796) Strongylocentrotus purpuratus clone R3-22B23, WOR... 34 0.48 2
(AC149984) Strongylocentrotus purpuratus clone R3-32A2, WORK... 38 0.48 2
(AC184310) Strongylocentrotus purpuratus clone R3-4011O16, W... 34 0.49 2
(AC126207) Rattus norvegicus clone CH230-284B4, WORKING DRAF... 34 0.49 2
(AC178216) Strongylocentrotus purpuratus clone R3-3085H18, W... 34 0.49 2
(AC105722) Rattus norvegicus clone CH230-269K13, *** SEQUENC... 38 0.49 2
(AC095376) Rattus norvegicus clone CH230-2E5, *** SEQUENCING... 38 0.49 2
(AC168563) Strongylocentrotus purpuratus clone R3-3091B10, W... 36 0.49 2
(AC105597) Rattus norvegicus clone CH230-125P15, *** SEQUENC... 38 0.49 2
(AC177368) Strongylocentrotus purpuratus clone R3-1032A3, WO... 38 0.49 2
(AC128812) Rattus norvegicus clone CH230-74E1, *** SEQUENCIN... 34 0.49 2
(AC201494) Strongylocentrotus purpuratus clone R3-3067E23, W... 34 0.49 2
(AC178650) Strongylocentrotus purpuratus clone R3-3007L22, W... 38 0.49 2
(AC178556) Strongylocentrotus purpuratus clone R3-3027K04, W... 38 0.49 2
(AC179511) Strongylocentrotus purpuratus clone R3-64P22, WOR... 36 0.49 2
(AC094716) Rattus norvegicus clone CH230-5M6, *** SEQUENCING... 38 0.49 2
(AC130168) Rattus norvegicus clone CH230-104B16, *** SEQUENC... 34 0.49 2
(AC149980) Strongylocentrotus purpuratus clone R3-32A6, WORK... 36 0.49 2
(AC113704) Rattus norvegicus clone CH230-100C24, WORKING DRA... 34 0.49 2
(AC120332) Rattus norvegicus clone CH230-213A22, WORKING DRA... 34 0.49 2
(AC125920) Rattus norvegicus clone CH230-74G4, *** SEQUENCIN... 34 0.49 2
(AC168806) Strongylocentrotus purpuratus clone R3-13H13, WOR... 38 0.49 2
(AC106313) Rattus norvegicus clone CH230-125F3, WORKING DRAF... 34 0.49 2
(AC114858) Rattus norvegicus clone CH230-86H24, *** SEQUENCI... 34 0.49 2
(AC094743) Rattus norvegicus clone CH230-5C15, WORKING DRAFT... 38 0.49 2
(AC181212) Strongylocentrotus purpuratus clone R3-115N18, WO... 38 0.49 2
(AC132557) Rattus norvegicus clone CH230-163F14, WORKING DRA... 38 0.49 2
(AC155158) Mus musculus chromosome 3, clone RP24-70L3, compl... 38 0.49 2
(AC103246) Rattus norvegicus clone CH230-147H10, WORKING DRA... 34 0.49 2
(AC181322) Strongylocentrotus purpuratus clone R3-4017N15, W... 38 0.49 2
(AC095940) Rattus norvegicus clone CH230-10G1, WORKING DRAFT... 34 0.49 2
(CU571285) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 0.49 2
(AC099421) Rattus norvegicus clone CH230-11K19, WORKING DRAF... 38 0.49 2
(AC103315) Rattus norvegicus clone CH230-218N3, *** SEQUENCI... 38 0.49 2
(AC113844) Rattus norvegicus clone CH230-134E24, *** SEQUENC... 36 0.49 2
(AC175977) Strongylocentrotus purpuratus clone R3-17G11, WOR... 34 0.49 2
(AC181342) Strongylocentrotus purpuratus clone R3-40D8, WORK... 38 0.49 2
(AC094637) Rattus norvegicus clone CH230-5D21, *** SEQUENCIN... 38 0.49 2
(AC120325) Rattus norvegicus clone CH230-26G11, WORKING DRAF... 38 0.49 2
(AC107433) Rattus norvegicus clone CH230-221G4, *** SEQUENCI... 38 0.49 2
(AC122959) Rattus norvegicus clone CH230-62A14, WORKING DRAF... 38 0.49 2
(AC095440) Rattus norvegicus clone CH230-5O21, WORKING DRAFT... 34 0.49 2
(AC094972) Rattus norvegicus clone CH230-6M6, *** SEQUENCING... 38 0.49 2
(AC176868) Strongylocentrotus purpuratus clone R3-31D9, WORK... 38 0.49 2
(AC123335) Rattus norvegicus clone CH230-325L12, *** SEQUENC... 38 0.49 2
(AC176424) Strongylocentrotus purpuratus clone R3-12D14, WOR... 38 0.50 2
(AC180051) Strongylocentrotus purpuratus clone R3-25G20, WOR... 38 0.50 2
(AC149979) Strongylocentrotus purpuratus clone R3-32A9, WORK... 36 0.50 2
(AC017002) Homo sapiens BAC clone RP11-68E19 from 2, complet... 34 0.50 2
(AC135913) Mus musculus chromosome 3 clone RP24-122F16, WORK... 38 0.50 2
(AC168407) Strongylocentrotus purpuratus clone R3-4002F24, W... 38 0.50 2
(BX004991) Zebrafish DNA sequence from clone CH211-222F23 in... 36 0.50 2
(AL807244) Zebrafish DNA sequence from clone CH211-215I13 in... 38 0.50 2
(AC177516) Strongylocentrotus purpuratus clone R3-9M4, WORKI... 34 0.50 2
(AC178305) Strongylocentrotus purpuratus clone R3-1114M14, W... 38 0.50 2
(AC177566) Strongylocentrotus purpuratus clone R3-1026E11, W... 38 0.50 2
(AC178421) Strongylocentrotus purpuratus clone R3-3113G09, W... 38 0.50 2
(AL161552) Arabidopsis thaliana DNA chromosome 4, contig fra... 34 0.50 2
(AC129616) Rattus norvegicus clone CH230-506P15, WORKING DRA... 34 0.50 2
(AC179014) Strongylocentrotus purpuratus clone R3-32I23, WOR... 36 0.50 2
(AC176016) Strongylocentrotus purpuratus clone R3-17O17, WOR... 38 0.50 2
(AC178877) Strongylocentrotus purpuratus clone R3-27F2, WORK... 38 0.50 2
(AC180394) Strongylocentrotus purpuratus clone R3-3106M4, WO... 36 0.50 2
(AC181029) Strongylocentrotus purpuratus clone R3-3050O24, W... 34 0.50 2
(AL929443) Mouse DNA sequence from clone RP23-467A7 on chrom... 34 0.50 2
(AC159187) Mus musculus BAC clone RP24-226L7 from chromosome... 38 0.50 2
(AC172395) Strongylocentrotus purpuratus clone R3-14J23, WOR... 34 0.50 2
(AC201609) Strongylocentrotus purpuratus clone R3-5N23, WORK... 34 0.50 2
(AC103873) Homo sapiens chromosome 11, clone RP11-768H8, com... 34 0.50 2
(AC168599) Strongylocentrotus purpuratus clone R3-3046N23, W... 38 0.50 2
(AC200382) Nomascus leucogenys leucogenys clone CH271-394M11... 38 0.50 2
(AC121008) Rattus norvegicus clone CH230-255I10, WORKING DRA... 34 0.50 2
(AC181850) Strongylocentrotus purpuratus clone R3-1022C20, W... 36 0.50 2
(AC216986) Nomascus leucogenys chromosome UNK clone CH271-78... 38 0.50 2
(AC178171) Strongylocentrotus purpuratus clone R3-3081O6, WO... 38 0.50 2
(AC179937) Strongylocentrotus purpuratus clone R3-23B7, WORK... 34 0.50 2
(AC178645) Strongylocentrotus purpuratus clone R3-11G01, WOR... 38 0.50 2
(AC016144) Homo sapiens 12 BAC RP11-367O10 (Roswell Park Can... 34 0.50 2
(AL353752) Human DNA sequence from clone RP11-497K15 on chro... 38 0.50 2
(AC184679) Strongylocentrotus purpuratus clone R3-1037F15, W... 38 0.50 2
(AC168360) Strongylocentrotus purpuratus clone R3-4013P14, W... 34 0.50 2
(AC168665) Strongylocentrotus purpuratus clone R3-3015M10, W... 34 0.50 2
(AC180661) Strongylocentrotus purpuratus clone R3-3089H09, W... 38 0.50 2
(AC101922) Mus musculus chromosome 3, clone RP24-182A8, comp... 38 0.50 2
(AC180698) Strongylocentrotus purpuratus clone R3-3087F16, W... 38 0.50 2
(AC161113) Mus musculus BAC clone RP24-362N9 from chromosome... 34 0.50 2
(CU914514) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.50 2
(AC200960) Strongylocentrotus purpuratus clone R3-1111M12, W... 34 0.50 2
(AC176761) Strongylocentrotus purpuratus clone R3-3097N7, WO... 38 0.50 2
(AC180239) Strongylocentrotus purpuratus clone R3-36B19, WOR... 38 0.50 2
(AL109803) Human DNA sequence *** SEQUENCING CANCELLED *** f... 38 0.50 2
(AC180839) Strongylocentrotus purpuratus clone R3-3069O18, W... 38 0.50 2
>(C84142) Dictyostelium discoideum slug cDNA, clone SSC325.
Length = 775
Score = 1150 bits (580), Expect(2) = 0.0
Identities = 596/604 (98%)
Strand = Plus / Plus
Query: 643 tattaggcatccatccaacaggatttgttcaaggtattaatggtttggcaaccccattta 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 tattaggcatccatccaacaggatttgttcaaggtattaatggtttggcaaccccattta 105
Query: 703 tttgggtattttttatcagagtatgttgaagatgttgccaattgtcaagtggctcaaatt 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tttgggtattttttatcagagtatgttgaagatgttgccaattgtcaagtggctcaaatt 165
Query: 763 gattcgaccatattggcaatggttgacgcagatagttattggtgtttaacgaaattattg 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 gattcgaccatattggcaatggttgacgcagatagttattggtgtttaacgaaattattg 225
Query: 823 gatggtattcaagatcattatacatttgctcaacctggtatacaaagaatgttggcaagt 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gatggtattcaagatcattatacatttgctcaacctggtatacaaagaatgttggcaagt 285
Query: 883 ttaaaaggattactagagaagattaacaatagtttatgtgcccatttggccgatcaagac 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ttaaaaggattactagagaagattaacaatagtttatgtgcccatttggccgatcaagac 345
Query: 943 gctcaattcattacgtttgcatttcgttggatgaattgtttactcatnnnnnnnatacct 1002
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 346 gctcaattcattacgtttgcatttcgttggatgaattgtttactcatgggggggatacct 405
Query: 1003 tttccattggtaatccgtatgtgggatacttatctaagtgaaaaggagggatttagtgtt 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tttccattggtaatccgtatgtgggatacttatctaagtgaaaaggagggatttagtgtt 465
Query: 1063 tttcatgtttatgtttgtgccgctttcttggttttatggtctgatgaattgaagcaaaga 1122
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 466 tttcatgtttatgtttgtgccgctttcttggtnttatggtctgatgaattgaagcaaaga 525
Query: 1123 gatttccctgacattatgattttccttcaaaaacctccaactcaaaattgggaagaacgt 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gatttccctgacattatgattttccttcaaaaacctccaactcaaaattgggaagaacgt 585
Query: 1183 gatattgaaagtttattctctactgctttctattatagatcattatatgaagaagctcaa 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gatattgaaagtttattctctactgctttctattatagatcattatatgaagaagctcaa 645
Query: 1243 tcac 1246
||||
Sbjct: 646 tcac 649
Score = 38.2 bits (19), Expect(2) = 0.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 624 gcttttatattttatgggg 642
|||||||||||||||||||
Sbjct: 26 gcttttatattttatgggg 44
Score = 688 bits (347), Expect = 0.0
Identities = 347/347 (100%)
Strand = Plus / Plus
Query: 643 tattaggcatccatccaacaggatttgttcaaggtattaatggtttggcaaccccattta 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 tattaggcatccatccaacaggatttgttcaaggtattaatggtttggcaaccccattta 105
Query: 703 tttgggtattttttatcagagtatgttgaagatgttgccaattgtcaagtggctcaaatt 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tttgggtattttttatcagagtatgttgaagatgttgccaattgtcaagtggctcaaatt 165
Query: 763 gattcgaccatattggcaatggttgacgcagatagttattggtgtttaacgaaattattg 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 gattcgaccatattggcaatggttgacgcagatagttattggtgtttaacgaaattattg 225
Query: 823 gatggtattcaagatcattatacatttgctcaacctggtatacaaagaatgttggcaagt 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gatggtattcaagatcattatacatttgctcaacctggtatacaaagaatgttggcaagt 285
Query: 883 ttaaaaggattactagagaagattaacaatagtttatgtgcccatttggccgatcaagac 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ttaaaaggattactagagaagattaacaatagtttatgtgcccatttggccgatcaagac 345
Query: 943 gctcaattcattacgtttgcatttcgttggatgaattgtttactcat 989
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gctcaattcattacgtttgcatttcgttggatgaattgtttactcat 392
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,257,394,981
Number of extensions: 76324317
Number of successful extensions: 7472181
Number of sequences better than 10.0: 2419
Length of query: 1371
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1347
Effective length of database: 99,340,224,878
Effective search space: 133811282910666
Effective search space used: 133811282910666
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| Homology vs Protein |
Query= Contig-U01890-1 (Contig-U01890-1Q) /CSM_Contig/Contig-U01890-1Q.Seq.d
(1371 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL451022_12(AL451022|pid:none) Neurospora crassa DNA linkage gro... 209 1e-54
CU640366_1332(CU640366|pid:none) Podospora anserina genomic DNA ... 206 1e-53
(O59737) RecName: Full=GTPase-activating protein gyp1; AltName: ... 196 5e-51
AP007154_647(AP007154|pid:none) Aspergillus oryzae RIB40 genomic... 203 1e-50
AM920437_803(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 200 1e-49
CR855616_1(CR855616|pid:none) Xenopus tropicalis finished cDNA, ... 191 1e-49
AC002340_10(AC002340|pid:none) Arabidopsis thaliana chromosome 2... 189 5e-49
G84711(G84711)hypothetical protein At2g30710 [imported] - Arabid... 189 5e-49
CR382137_141(CR382137|pid:none) Debaryomyces hansenii strain CBS... 196 2e-48
CR860928_1(CR860928|pid:none) Pongo abelii mRNA; cDNA DKFZp469F1... 185 9e-48
AK154226_1(AK154226|pid:none) Mus musculus NOD-derived CD11c +ve... 185 9e-48
(Q8R5A6) RecName: Full=TBC1 domain family member 22A; &AK039627... 185 9e-48
BC023106_1(BC023106|pid:none) Mus musculus TBC1 domain family, m... 185 9e-48
(Q95KI1) RecName: Full=TBC1 domain family member 22A; Flags: Fra... 185 1e-47
AB060857_1(AB060857|pid:none) Macaca fascicularis brain cDNA clo... 185 1e-47
AK127653_1(AK127653|pid:none) Homo sapiens cDNA FLJ45751 fis, cl... 184 2e-47
AL023733_2(AL023733|pid:none) Human DNA sequence from clone SC22... 184 2e-47
AK301445_1(AK301445|pid:none) Homo sapiens cDNA FLJ57214 complet... 184 2e-47
BC001292_1(BC001292|pid:none) Homo sapiens TBC1 domain family, m... 184 3e-47
AK066076_1(AK066076|pid:none) Oryza sativa Japonica Group cDNA c... 183 3e-47
AK055591_1(AK055591|pid:none) Homo sapiens cDNA FLJ31029 fis, cl... 183 4e-47
FN392319_221(FN392319|pid:none) Pichia pastoris GS115 chromosome... 180 4e-47
EU975359_1(EU975359|pid:none) Zea mays clone 488613 TBC1 domain ... 179 3e-46
T21643(T21643) hypothetical protein F32B6.8 - Caenorhabditis ele... 180 4e-46
Z81074_9(Z81074|pid:none) Caenorhabditis elegans Cosmid F32B6, c... 180 4e-46
(Q9NU19) RecName: Full=TBC1 domain family member 22B; &AB449909... 179 5e-46
BC142187_1(BC142187|pid:none) Bos taurus TBC1 domain family, mem... 179 5e-46
AB173992_1(AB173992|pid:none) Macaca fascicularis brain cDNA clo... 179 8e-46
BC125999_1(BC125999|pid:none) Xenopus laevis hypothetical protei... 176 7e-45
AY577002_1(AY577002|pid:none) Danio rerio clone RZ150A4A11 C22or... 182 3e-44
BC002720_1(BC002720|pid:none) Homo sapiens TBC1 domain family, m... 179 2e-43
CR382121_338(CR382121|pid:none) Kluyveromyces lactis strain NRRL... 166 5e-42
AE014297_3040(AE014297|pid:none) Drosophila melanogaster chromos... 164 2e-41
AM910994_53(AM910994|pid:none) Plasmodium knowlesi strain H chro... 162 3e-41
CU928170_739(CU928170|pid:none) Kluyveromyces thermotolerans str... 163 7e-41
BC060066_1(BC060066|pid:none) Mus musculus TBC1 domain family, m... 164 7e-39
CU928173_486(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 164 7e-39
CR380958_448(CR380958|pid:none) Candida glabrata strain CBS138 c... 159 2e-37
AC084047_21(AC084047|pid:none) Trypanosoma brucei chromosome 6 c... 118 1e-25
AM502248_172(AM502248|pid:none) Leishmania infantum chromosome 30. 114 5e-25
AM494967_147(AM494967|pid:none) Leishmania braziliensis chromoso... 112 1e-24
BC000291_1(BC000291|pid:none) Homo sapiens TBC1 domain family, m... 109 2e-22
(Q08484) RecName: Full=GTPase-activating protein GYP1; AltName: ... 103 1e-20
AM502245_169(AM502245|pid:none) Leishmania infantum chromosome 27. 79 5e-13
AM494964_217(AM494964|pid:none) Leishmania braziliensis chromoso... 78 7e-13
AY058542_1(AY058542|pid:none) Drosophila melanogaster LD24460 fu... 72 5e-11
AE014296_1575(AE014296|pid:none) Drosophila melanogaster chromos... 72 6e-11
AC130798_4(AC130798|pid:none) Medicago truncatula clone mth2-27f... 67 5e-10
BT054291_1(BT054291|pid:none) Zea mays full-length cDNA clone ZM... 67 9e-10
AP008217_903(AP008217|pid:none) Oryza sativa (japonica cultivar-... 66 1e-09
BC155093_1(BC155093|pid:none) Danio rerio zgc:171891, mRNA (cDNA... 67 2e-09
BT038102_1(BT038102|pid:none) Zea mays full-length cDNA clone ZM... 66 3e-09
Z68117_4(Z68117|pid:none) Caenorhabditis elegans Cosmid F45E6, c... 66 3e-09
AK072293_1(AK072293|pid:none) Oryza sativa Japonica Group cDNA c... 65 3e-09
AC146683_4(AC146683|pid:none) Medicago truncatula clone mth2-179... 64 7e-09
AJ720021_1(AJ720021|pid:none) Gallus gallus mRNA for hypothetica... 62 3e-08
BC143010_1(BC143010|pid:none) Synthetic construct Homo sapiens c... 62 3e-08
(Q8TC07) RecName: Full=TBC1 domain family member 15; 61 3e-08
AB449901_1(AB449901|pid:none) Homo sapiens TBC1D15 mRNA for TBC1... 61 3e-08
AK292306_1(AK292306|pid:none) Homo sapiens cDNA FLJ77374 complet... 61 3e-08
CR857250_1(CR857250|pid:none) Pongo abelii mRNA; cDNA DKFZp469P1... 60 4e-08
BC028352_1(BC028352|pid:none) Homo sapiens TBC1 domain family, m... 60 4e-08
AK123828_1(AK123828|pid:none) Homo sapiens cDNA FLJ41834 fis, cl... 62 5e-08
AK295183_1(AK295183|pid:none) Homo sapiens cDNA FLJ54808 complet... 62 5e-08
BC136509_1(BC136509|pid:none) Homo sapiens TBC1 domain family, m... 62 5e-08
(Q9HA65) RecName: Full=TBC1 domain family member 17; &AK022230_... 60 6e-08
AK300007_1(AK300007|pid:none) Homo sapiens cDNA FLJ55654 complet... 60 6e-08
AY129013_1(AY129013|pid:none) Homo sapiens clone FP17814 unknown... 60 6e-08
DQ054831_1(DQ054831|pid:none) Mus musculus TBC1 domain family me... 60 7e-08
(Q9CXF4) RecName: Full=TBC1 domain family member 15; &AK014477_... 60 7e-08
(Q8BYH7) RecName: Full=TBC1 domain family member 17; &AK039566_... 60 7e-08
AK153732_1(AK153732|pid:none) Mus musculus 3 days neonate thymus... 60 7e-08
BC167441_1(BC167441|pid:none) Danio rerio si:ch211-198d18.2, mRN... 61 1e-07
AL935165_5(AL935165|pid:none) Zebrafish DNA sequence from clone ... 61 1e-07
BC151508_1(BC151508|pid:none) Bos taurus TBC1 domain family, mem... 59 1e-07
BC063206_1(BC063206|pid:none) Xenopus tropicalis TBC1 domain fam... 59 2e-07
BC076966_1(BC076966|pid:none) Xenopus tropicalis TBC1 domain fam... 59 2e-07
AL035528_12(AL035528|pid:none) Arabidopsis thaliana DNA chromoso... 59 2e-07
AK162115_1(AK162115|pid:none) Mus musculus in vitro fertilized e... 60 2e-07
AP008210_598(AP008210|pid:none) Oryza sativa (japonica cultivar-... 59 3e-07
BT064954_1(BT064954|pid:none) Zea mays full-length cDNA clone ZM... 58 7e-07
BC017607_1(BC017607|pid:none) Mus musculus TBC1 domain family, m... 56 1e-06
AK046883_1(AK046883|pid:none) Mus musculus 10 days neonate medul... 56 1e-06
AB025606_8(AB025606|pid:none) Arabidopsis thaliana genomic DNA, ... 57 2e-06
BC095269_1(BC095269|pid:none) Danio rerio zgc:110443, mRNA (cDNA... 56 3e-06
BX950194_6(BX950194|pid:none) Zebrafish DNA sequence from clone ... 55 3e-06
BC066727_1(BC066727|pid:none) Danio rerio zgc:110443, mRNA (cDNA... 54 5e-06
BC051184_1(BC051184|pid:none) Mus musculus USP6 N-terminal like,... 55 6e-06
(Q80XC3) RecName: Full=USP6 N-terminal-like protein; &AL845275_... 55 6e-06
AL845275_4(AL845275|pid:none) Mouse DNA sequence from clone RP23... 55 6e-06
AL109820_17(AL109820|pid:none) S.pombe chromosome I cosmid c1952... 54 8e-06
AL731623_9(AL731623|pid:none) Oryza sativa genomic DNA, chromoso... 54 8e-06
CP000581_173(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 54 1e-05
(Q92738) RecName: Full=USP6 N-terminal-like protein; AltName: Fu... 54 1e-05
D13644_1(D13644|pid:none) Homo sapiens mRNA for KIAA0019 protein... 54 1e-05
AK228688_1(AK228688|pid:none) Arabidopsis thaliana mRNA for puta... 54 2e-05
AC013483_23(AC013483|pid:none) Arabidopsis thaliana chromosome I... 53 2e-05
AK228869_1(AK228869|pid:none) Arabidopsis thaliana mRNA for puta... 53 2e-05
AY084232_1(AY084232|pid:none) Arabidopsis thaliana clone 100460 ... 53 2e-05
CR954201_164(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 53 3e-05
AJ719378_1(AJ719378|pid:none) Gallus gallus partial mRNA for hyp... 53 3e-05
AK068743_1(AK068743|pid:none) Oryza sativa Japonica Group cDNA c... 53 3e-05
AC021640_9(AC021640|pid:none) Arabidopsis thaliana chromosome II... 52 4e-05
BT038351_1(BT038351|pid:none) Zea mays full-length cDNA clone ZM... 52 5e-05
BT084174_1(BT084174|pid:none) Zea mays full-length cDNA clone ZM... 52 5e-05
BC108645_1(BC108645|pid:none) Xenopus laevis hypothetical protei... 52 5e-05
AL110485_2(AL110485|pid:none) Caenorhabditis elegans YAC Y46G5A,... 52 5e-05
AL110485_3(AL110485|pid:none) Caenorhabditis elegans YAC Y46G5A,... 52 5e-05
(Q28CB1) RecName: Full=TBC1 domain family member 2B; &BC121891_... 51 1e-04
BC157165_1(BC157165|pid:none) Xenopus tropicalis hypothetical pr... 51 1e-04
AL138659_12(AL138659|pid:none) Arabidopsis thaliana DNA chromoso... 45 1e-04
AK117388_1(AK117388|pid:none) Arabidopsis thaliana At3g59570 mRN... 45 1e-04
AC009259_7(AC009259|pid:none) Trypanosoma brucei chromosome 6 cl... 50 1e-04
(Q6GL87) RecName: Full=Growth hormone-regulated TBC protein 1; ... 50 1e-04
AK131086_1(AK131086|pid:none) Homo sapiens mRNA for FLJ00288 pro... 50 1e-04
BC121502_1(BC121502|pid:none) Xenopus tropicalis TBC1 domain fam... 49 2e-04
AE017351_95(AE017351|pid:none) Cryptococcus neoformans var. neof... 50 3e-04
AE017341_281(AE017341|pid:none) Cryptococcus neoformans var. neo... 50 3e-04
BC160813_1(BC160813|pid:none) Rattus norvegicus TBC1 domain fami... 50 3e-04
BC129516_1(BC129516|pid:none) Xenopus laevis hypothetical protei... 50 3e-04
AC004809_18(AC004809|pid:none) Arabidopsis thaliana chromosome 1... 48 3e-04
AM429097_1(AM429097|pid:none) Vitis vinifera contig VV78X126805.... 45 4e-04
BC122032_1(BC122032|pid:none) Xenopus tropicalis hypothetical pr... 49 4e-04
(Q9BXI6) RecName: Full=TBC1 domain family member 10A; AltName: F... 49 4e-04
AK093231_1(AK093231|pid:none) Homo sapiens cDNA FLJ35912 fis, cl... 49 4e-04
BC168786_1(BC168786|pid:none) Xenopus tropicalis hypothetical pr... 49 4e-04
BC150187_1(BC150187|pid:none) Homo sapiens TBC1 domain family, m... 49 4e-04
BC143051_1(BC143051|pid:none) Synthetic construct Homo sapiens c... 49 4e-04
(P58802) RecName: Full=TBC1 domain family member 10A; AltName: F... 49 6e-04
BC029773_1(BC029773|pid:none) Mus musculus TBC1 domain family, m... 49 6e-04
AL807825_6(AL807825|pid:none) Mouse DNA sequence from clone RP23... 49 6e-04
BC084964_1(BC084964|pid:none) Xenopus laevis hypothetical LOC495... 49 6e-04
AE017351_212(AE017351|pid:none) Cryptococcus neoformans var. neo... 49 6e-04
(Q8IV04) RecName: Full=Carabin; AltName: Full=TBC1 domain family... 49 6e-04
AK140872_1(AK140872|pid:none) Mus musculus 16 days embryo head c... 49 6e-04
AK027457_1(AK027457|pid:none) Homo sapiens cDNA FLJ14551 fis, cl... 48 7e-04
(Q9NVG8) RecName: Full=TBC1 domain family member 13; &AL441992_... 47 0.001
AY136478_1(AY136478|pid:none) Arabidopsis thaliana plant adhesio... 47 0.002
AE014297_1363(AE014297|pid:none) Drosophila melanogaster chromos... 47 0.002
BC099146_1(BC099146|pid:none) Rattus norvegicus TBC1 domain fami... 47 0.002
Z72501_1(Z72501|pid:none) Caenorhabditis elegans Cosmid C04C11, ... 47 0.002
Z78539_9(Z78539|pid:none) Caenorhabditis elegans Cosmid C31E10, ... 47 0.002
AK221904_1(AK221904|pid:none) Arabidopsis thaliana mRNA for GTPa... 46 0.003
AY039546_1(AY039546|pid:none) Arabidopsis thaliana AT5g53570/MNC... 46 0.003
AB015476_10(AB015476|pid:none) Arabidopsis thaliana genomic DNA,... 46 0.003
DQ415922_30(DQ415922|pid:none) Cleome spinosa clone BAC Cs1, com... 46 0.004
AM502254_659(AM502254|pid:none) Leishmania infantum chromosome 36. 45 0.005
AK001605_1(AK001605|pid:none) Homo sapiens cDNA FLJ10743 fis, cl... 45 0.005
AE013599_1904(AE013599|pid:none) Drosophila melanogaster chromos... 45 0.006
AE013599_1902(AE013599|pid:none) Drosophila melanogaster chromos... 45 0.006
(Q6PBU5) RecName: Full=Growth hormone-regulated TBC protein 1-A;... 45 0.008
BC149744_1(BC149744|pid:none) Bos taurus TBC1 domain family, mem... 44 0.011
AP007155_1002(AP007155|pid:none) Aspergillus oryzae RIB40 genomi... 44 0.011
BC108420_1(BC108420|pid:none) Mus musculus TBC1 domain family, m... 44 0.014
FN392319_1506(FN392319|pid:none) Pichia pastoris GS115 chromosom... 44 0.014
BC056467_1(BC056467|pid:none) Mus musculus TBC1 domain family, m... 44 0.014
(Q6GLZ0) RecName: Full=Growth hormone-regulated TBC protein 1; ... 44 0.018
AB463304_1(AB463304|pid:none) Synthetic construct DNA, clone: pF... 44 0.018
AB028978_1(AB028978|pid:none) Homo sapiens mRNA for KIAA1055 pro... 44 0.018
BC033712_1(BC033712|pid:none) Homo sapiens TBC1 domain family, m... 44 0.018
(Q9UPU7) RecName: Full=TBC1 domain family member 2B; 44 0.018
BC144482_1(BC144482|pid:none) Homo sapiens TBC1 domain family, m... 44 0.018
BC140766_1(BC140766|pid:none) Homo sapiens TBC1 domain family, m... 44 0.018
EF146951_1(EF146951|pid:none) Populus trichocarpa clone WS01225_... 43 0.023
CR954207_111(CR954207|pid:none) Ostreococcus tauri strain OTTH05... 43 0.023
Z93394_7(Z93394|pid:none) Caenorhabditis elegans YAC Y48E1C, com... 41 0.024
AM270079_49(AM270079|pid:none) Aspergillus niger contig An04c018... 43 0.031
EF086695_1(EF086695|pid:none) Picea sitchensis clone WS02732_I13... 42 0.040
EU957246_1(EU957246|pid:none) Zea mays clone 1586973 unknown mRNA. 42 0.040
BT021386_1(BT021386|pid:none) Drosophila melanogaster LD33902 fu... 42 0.040
BT052665_1(BT052665|pid:none) Medicago truncatula clone MTYFD_FE... 42 0.040
AK099868_1(AK099868|pid:none) Oryza sativa Japonica Group cDNA c... 42 0.052
AE014134_61(AE014134|pid:none) Drosophila melanogaster chromosom... 42 0.052
AY383707_1(AY383707|pid:none) Rattus norvegicus LRRGT00052 mRNA,... 42 0.052
(Q5F415) RecName: Full=TBC1 domain family member 23; &AJ851485_... 42 0.068
BC168982_1(BC168982|pid:none) Rattus norvegicus TBC1 domain fami... 42 0.068
AK071602_1(AK071602|pid:none) Oryza sativa Japonica Group cDNA c... 42 0.068
AK122585_1(AK122585|pid:none) Homo sapiens mRNA for FLJ00332 pro... 42 0.068
(Q8TBP0) RecName: Full=TBC1 domain family member 16; &AB449902_... 42 0.068
CP001323_331(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 41 0.089
AK007905_1(AK007905|pid:none) Mus musculus 10 day old male pancr... 41 0.12
AK082863_1(AK082863|pid:none) Mus musculus ES cells cDNA, RIKEN ... 41 0.12
FN357585_5(FN357585|pid:none) Schistosoma mansoni genome sequenc... 41 0.12
AK131177_1(AK131177|pid:none) Mus musculus mRNA for mFLJ00332 pr... 41 0.12
AM920437_715(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 41 0.12
AE014297_2233(AE014297|pid:none) Drosophila melanogaster chromos... 40 0.15
BC071978_1(BC071978|pid:none) Homo sapiens TBC1 domain family, m... 40 0.15
AK124772_1(AK124772|pid:none) Homo sapiens cDNA FLJ42782 fis, cl... 40 0.15
AF318370_1(AF318370|pid:none) Homo sapiens pp8997 mRNA, complete... 40 0.15
AB449882_1(AB449882|pid:none) Homo sapiens TBC1D2A mRNA for TBC1... 40 0.15
AK298575_1(AK298575|pid:none) Homo sapiens cDNA FLJ56222 complet... 40 0.15
AB169470_1(AB169470|pid:none) Macaca fascicularis testis cDNA, c... 40 0.20
AL683884_10(AL683884|pid:none) Mouse DNA sequence from clone RP2... 40 0.20
CU638743_621(CU638743|pid:none) Podospora anserina genomic DNA c... 40 0.20
(Q9UUH7) RecName: Full=GTPase-activating protein gyp7; AltName: ... 40 0.20
EU957547_1(EU957547|pid:none) Zea mays clone 1597118 TBC domain ... 40 0.26
CP001142_382(CP001142|pid:none) Phaeodactylum tricornutum CCAP 1... 40 0.26
CU928181_330(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 40 0.26
BC110738_1(BC110738|pid:none) Xenopus laevis hypothetical protei... 39 0.34
CR382128_461(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 39 0.34
(Q7SXV1) RecName: Full=TBC1 domain family member 23; &BC055235_... 39 0.34
BC171406_1(BC171406|pid:none) Danio rerio TBC1 domain family, me... 39 0.34
CU928169_222(CU928169|pid:none) Kluyveromyces thermotolerans str... 39 0.34
BT068086_1(BT068086|pid:none) Zea mays full-length cDNA clone ZM... 39 0.34
CU928175_441(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 39 0.34
G88391(G88391)protein R06B10.5 [imported] - Caenorhabditis elegans 39 0.34
CR859635_1(CR859635|pid:none) Pongo abelii mRNA; cDNA DKFZp469C2... 39 0.44
(Q6FWI1) RecName: Full=GTPase-activating protein GYP7; AltName: ... 39 0.44
AM910991_113(AM910991|pid:none) Plasmodium knowlesi strain H chr... 39 0.44
CU633900_297(CU633900|pid:none) Podospora anserina genomic DNA c... 39 0.44
AK026127_1(AK026127|pid:none) Homo sapiens cDNA: FLJ22474 fis, c... 39 0.58
CR382128_61(CR382128|pid:none) Yarrowia lipolytica strain CLIB12... 39 0.58
BC043775_1(BC043775|pid:none) Xenopus laevis hypothetical protei... 39 0.58
BT038472_1(BT038472|pid:none) Zea mays full-length cDNA clone ZM... 39 0.58
AY026527_1(AY026527|pid:none) Homo sapiens prostate antigen PARI... 39 0.58
T19836(T19836)hypothetical protein C38H2.1 - Caenorhabditis eleg... 39 0.58
AL136221_9(AL136221|pid:none) Human DNA sequence from clone RP11... 38 0.75
AP004573_9(AP004573|pid:none) Oryza sativa Japonica Group genomi... 38 0.75
BC080640_1(BC080640|pid:none) Homo sapiens growth hormone regula... 38 0.75
AK001750_1(AK001750|pid:none) Homo sapiens cDNA FLJ10888 fis, cl... 38 0.75
AB449887_1(AB449887|pid:none) Homo sapiens TBC1D6 mRNA for TBC1 ... 38 0.75
CP000587_123(CP000587|pid:none) Ostreococcus lucimarinus CCE9901... 38 0.75
BC112123_1(BC112123|pid:none) Homo sapiens growth hormone regula... 38 0.75
FN357446_26(FN357446|pid:none) Schistosoma mansoni genome sequen... 34 0.80
CR382124_787(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 38 0.98
(Q6NRC7) RecName: Full=TBC1 domain family member 23; &BC070830_... 38 0.98
FN357531_9(FN357531|pid:none) Schistosoma mansoni genome sequenc... 38 0.98
CU928166_331(CU928166|pid:none) Kluyveromyces thermotolerans str... 37 1.3
(Q09445) RecName: Full=Uncharacterized protein C04A2.1; &U23448... 37 1.7
AL356834_3(AL356834|pid:none) Neurospora crassa DNA linkage grou... 37 1.7
AP007151_626(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 37 1.7
AM502248_321(AM502248|pid:none) Leishmania infantum chromosome 30. 37 1.7
CR533427_1(CR533427|pid:none) Paramecium tetraurelia, complete g... 37 1.7
T16712(T16712)hypothetical protein R11B5.1 - Caenorhabditis eleg... 37 2.2
FN392321_820(FN392321|pid:none) Pichia pastoris GS115 chromosome... 37 2.2
BX284749_3(BX284749|pid:none) Neurospora crassa DNA linkage grou... 37 2.2
(Q9D3N8) RecName: Full=Growth hormone-regulated TBC protein 1; A... 36 2.9
CR533426_1(CR533426|pid:none) Paramecium tetraurelia, complete g... 36 3.7
(P35125) RecName: Full=Ubiquitin carboxyl-terminal hydrolase 6; ... 36 3.7
AY142502_1(AY142502|pid:none) Arabidopsis thaliana unknown prote... 36 3.7
(Q755I4) RecName: Full=GTPase-activating protein GYP5; &AE01681... 36 3.7
(P53258) RecName: Full=GTPase-activating protein GYP2; AltName: ... 36 3.7
X63547_1(X63547|pid:none) H.sapiens mRNA for tre oncogene (clone... 36 3.7
AM270021_16(AM270021|pid:none) Aspergillus niger contig An02c026... 36 3.7
AE016815_32(AE016815|pid:none) Ashbya gossypii (= Eremothecium g... 36 3.7
AL844508_72(AL844508|pid:none) Plasmodium falciparum 3D7 chromos... 35 4.9
CP001638_243(CP001638|pid:none) Geobacillus sp. WCH70, complete ... 35 4.9
(P48365) RecName: Full=GTPase-activating protein GYP7; AltName: ... 35 4.9
AC146555_23(AC146555|pid:none) Medicago truncatula clone mth2-10... 35 4.9
(Q8K0F1) RecName: Full=TBC1 domain family member 23; &AK155142_... 35 4.9
AM118080_127(AM118080|pid:none) Ustilago hordei mating type regi... 30 6.2
CP000587_362(CP000587|pid:none) Ostreococcus lucimarinus CCE9901... 35 6.4
CP000753_799(CP000753|pid:none) Shewanella baltica OS185, comple... 35 8.3
CP000891_843(CP000891|pid:none) Shewanella baltica OS195, comple... 35 8.3
CU638743_741(CU638743|pid:none) Podospora anserina genomic DNA c... 35 8.3
>AL451022_12(AL451022|pid:none) Neurospora crassa DNA linkage group V
Cosmid contig 2E4.
Length = 602
Score = 209 bits (531), Expect(2) = 1e-54
Identities = 98/189 (51%), Positives = 134/189 (70%)
Frame = +1
Query: 688 WQPHLFGYFLSEYVEDVANCQVAQIDSTILAMVDADSYWCLTKLLDGIQDHYTFAQPGIQ 867
WQ L Y +E + Q+ +L V+AD++WCLTKLLDGIQDHY AQPGIQ
Sbjct: 402 WQVFLGTYITDPDIE--SGMDPGQLPRAVLDAVEADTFWCLTKLLDGIQDHYIVAQPGIQ 459
Query: 868 RMLASLKGLLEKINNSLCAHLADQDAQFITFAFRWMNCLLMGGIPFPLVIRMWDTYLSEK 1047
R +A+L+ L ++I+ L HL +++ +FI F+FRWMNCLLM I IRMWDTY++E+
Sbjct: 460 RQVAALRDLTQRIDAGLAKHLEEENVEFIQFSFRWMNCLLMREISVKNTIRMWDTYMAEE 519
Query: 1048 EGFSVFHVYVCAAFLVLWSDELKQRDFPDIMIFLQKPPTQNWEERDIESLFSTAFYYRSL 1227
+GFS FH+YVCAAFLV WSD+L + DF +IM+FLQ PT+ W E+DIE L S A+ ++SL
Sbjct: 520 QGFSEFHLYVCAAFLVKWSDKLVKMDFQEIMMFLQSLPTREWTEKDIELLLSEAYIWQSL 579
Query: 1228 YEEAQSHLK 1254
++ + +HLK
Sbjct: 580 FKGSSAHLK 588
Score = 29.3 bits (64), Expect(2) = 1e-54
Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = +3
Query: 654 HP-TGFVQGINGLATPFIWVF 713
HP +G+VQGIN L TPF VF
Sbjct: 385 HPASGYVQGINDLVTPFWQVF 405
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,730,720,591
Number of extensions: 33559751
Number of successful extensions: 81006
Number of sequences better than 10.0: 255
Number of HSP's gapped: 80905
Number of HSP's successfully gapped: 334
Length of query: 457
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 325
Effective length of database: 623,955,076
Effective search space: 202785399700
Effective search space used: 202785399700
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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