| Homology vs DNA |
 Query= Contig-U12124-1 (Contig-U12124-1Q) /CSM_Contig/Contig-U12124-1Q.Seq.d
(1468 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ406959) Dictyostelium discoideum cDNA clone:dds37c03, 3' ... 1328 0.0 1
(BJ399876) Dictyostelium discoideum cDNA clone:dds7j19, 3' e... 1037 0.0 1
(BJ401683) Dictyostelium discoideum cDNA clone:dds19g02, 3' ... 1009 0.0 1
(AU053253) Dictyostelium discoideum slug cDNA, clone SLI236. 644 0.0 3
(AU060077) Dictyostelium discoideum slug cDNA, clone SLA136. 430 0.0 4
(C25519) Dictyostelium discoideum slug cDNA, clone SLA136. 696 0.0 2
(BJ377968) Dictyostelium discoideum cDNA clone:ddc26h18, 3' ... 480 e-131 1
(AU062191) Dictyostelium discoideum slug cDNA, clone SLI236. 149 8e-40 2
(EK445364) 1095467027451 Global-Ocean-Sampling_GS-32-01-01-1... 74 2e-08 1
(AC102195) Mus musculus chromosome 18, clone RP24-430B21, co... 68 1e-06 1
(AC102135) Mus musculus chromosome 18, clone RP23-253J5, com... 68 1e-06 1
(EK465111) 1095469418262 Global-Ocean-Sampling_GS-32-01-01-1... 66 4e-06 1
(AC161198) Mus musculus chromosome 15, clone RP23-34E23, com... 64 2e-05 1
(AC118646) Mus musculus chromosome 15, clone RP24-116A18, co... 64 2e-05 1
(EJ202728) 1092344311593 Global-Ocean-Sampling_GS-27-01-01-1... 64 2e-05 1
(EF802509) Mus musculus C57BL/6N IST11160A8HMF1 gene trap em... 64 2e-05 1
(EY156045) CBTN6015.g1_M16.ab1:P Triphysaria pusilla root ti... 64 2e-05 1
(EY154619) CBTN5363.g1_F22.ab1:P Triphysaria pusilla root ti... 64 2e-05 1
(AC198921) Monosiga brevicollis clone MonoB-5B15, complete s... 62 6e-05 1
(AC137301) Rattus norvegicus clone CH230-unknown, WORKING DR... 62 6e-05 1
(AC132695) Rattus norvegicus clone CH230-141I19, WORKING DRA... 62 6e-05 1
(BX005114) Mouse DNA sequence from clone RP24-199F23 on chro... 60 2e-04 1
(AC155941) Mus musculus 10 BAC RP24-496C8 (Roswell Park Canc... 60 2e-04 1
(AC142169) Homo sapiens fosmid clone XXFOS-81770D1 from 7, c... 60 2e-04 1
(AG314105) Mus musculus molossinus DNA, clone:MSMg01-097M01.... 60 2e-04 1
(BV067719) S212P6151FC1.T0 CZECHII/Ei Mus musculus STS genom... 58 0.001 1
(CT030662) Mouse DNA sequence from clone RP23-89J7 on chromo... 58 0.001 1
(CT009635) Mouse DNA sequence from clone RP23-109E18 on chro... 58 0.001 1
(BX901906) Mouse DNA sequence from clone RP23-328F9 on chrom... 58 0.001 1
(AL935297) Mouse DNA sequence from clone RP23-419K8 on chrom... 58 0.001 1
(AL935118) Mouse DNA sequence from clone RP23-464I16 on chro... 58 0.001 1
(AL929556) Mouse DNA sequence from clone RP23-353B17 on chro... 58 0.001 1
(AL928635) Mouse DNA sequence from clone RP23-410E7 on chrom... 58 0.001 1
(AL928545) Mouse DNA sequence from clone RP23-218A13 on chro... 58 0.001 1
(AL844590) Mouse DNA sequence from clone RP23-335P15 on chro... 58 0.001 1
(AL844146) Mouse DNA sequence from clone RP24-89J1 on chromo... 58 0.001 1
(AL805895) Mouse DNA sequence from clone RP23-64K11 on chrom... 58 0.001 1
(AL772335) Mouse DNA sequence from clone RP23-415F19 on chro... 58 0.001 1
(AL670292) Mouse DNA sequence from clone RP23-231H22 on chro... 58 0.001 1
(AL670227) Mouse DNA sequence from clone RP23-317N1 on chrom... 58 0.001 1
(AL627099) Mouse DNA sequence from clone RP23-306F22 on chro... 58 0.001 1
(AL606905) Mouse DNA sequence from clone RP23-394K13 on chro... 58 0.001 1
(AF303744) Mus musculus oxidized LDL receptor (Lox-1) mRNA, ... 58 0.001 1
(AC167565) Mus musculus BAC clone RP24-84D8 from chromosome ... 58 0.001 1
(AC164292) Mus musculus BAC clone RP24-177C20 from chromosom... 58 0.001 1
(AC163635) Mus musculus BAC clone RP23-183F13 from chromosom... 58 0.001 1
(AC161761) Mus musculus BAC clone RP23-379E17 from chromosom... 58 0.001 1
(AC160407) Mus musculus 10 BAC RP24-445P5 (Roswell Park Canc... 58 0.001 1
(AC159194) Mus musculus BAC clone RP23-469D18 from chromosom... 58 0.001 1
(AC154757) Mus musculus BAC clone RP23-116J1 from chromosome... 58 0.001 1
(AC154751) Mus musculus BAC clone RP24-399L21 from chromosom... 58 0.001 1
(AC153995) Mus musculus 6 BAC RP24-534C23 (Roswell Park Canc... 58 0.001 1
(AC151267) Mus musculus BAC clone RP24-296E22 from chromosom... 58 0.001 1
(AC147129) Mus musculus BAC clone RP24-531L5 from 1, complet... 58 0.001 1
(AC141868) Mus musculus BAC clone RP24-418L21 from 8, comple... 58 0.001 1
(AC140340) Mus musculus BAC clone RP24-260O19 from chromosom... 58 0.001 1
(AC138299) Mus musculus chromosome 18, clone RP23-296E4, com... 58 0.001 1
(AC133938) Mus musculus BAC clone RP23-399J17 from 3, comple... 58 0.001 1
(AC133200) Mus musculus BAC clone RP23-292C19 from 3, comple... 58 0.001 1
(AC132593) Mus musculus BAC clone RP24-218L22 from 3, comple... 58 0.001 1
(AC132473) Mus musculus BAC clone RP23-114F11 from chromosom... 58 0.001 1
(AC131975) Mus musculus chromosome 17, clone RP24-146B4, com... 58 0.001 1
(AC131731) Mus musculus BAC clone RP23-117K10 from 3, comple... 58 0.001 1
(AC124707) Mus musculus BAC clone RP24-73H16 from 12, comple... 58 0.001 1
(AC124431) Mus musculus BAC clone RP24-243J21 from chromosom... 58 0.001 1
(AC122867) Mus musculus BAC clone RP23-146P6 from 8, complet... 58 0.001 1
(AC122493) Mus musculus BAC clone RP24-392M11 from 3, comple... 58 0.001 1
(AC122335) Mus musculus BAC clone RP23-350F7 from chromosome... 58 0.001 1
(AC121137) Mus musculus chromosome 14, clone RP23-406K12, co... 58 0.001 1
(AC115119) Mus musculus BAC clone RP23-87M19 from 18, comple... 58 0.001 1
(AC113977) Mus musculus chromosome 1, clone RP23-161E13, com... 58 0.001 1
(AC111008) Mus musculus BAC clone RP23-415J21 from chromosom... 58 0.001 1
(AC107734) Mus musculus chromosome 7, clone RP23-399E4, comp... 58 0.001 1
(AC102212) Mus musculus chromosome 8, clone RP24-374D15, com... 58 0.001 1
(AC102189) Mus musculus chromosome 8, clone RP24-216J7, comp... 58 0.001 1
(AC102116) Mus musculus chromosome 3, clone RP23-149A10, com... 58 0.001 1
(AC099720) Mus musculus chromosome 10, clone RP23-415H15, co... 58 0.001 1
(AC083913) Genomic sequence for Mus musculus, clone RP23-376... 58 0.001 1
(AC026891) Mus musculus strain C57BL6/J chromosome 6 clone R... 58 0.001 1
(AC156452) Volvox carteri clone JGIAOBO-45J5, complete seque... 58 0.001 1
(DD173702) CRYSTAL OF OXIDIZED LDL RECOGNITION DOMAIN OF OXI... 58 0.001 1
(DD173701) CRYSTAL OF OXIDIZED LDL RECOGNITION DOMAIN OF OXI... 58 0.001 1
(AX026121) Sequence 1 from Patent WO0032785. 58 0.001 1
(AY552537) Oryctolagus cuniculus H+,K+-ATPase alpha 2 subuni... 58 0.001 1
(AL451051) Human DNA sequence from clone RP11-293L15 on chro... 58 0.001 1
(AL163303) Homo sapiens chromosome 21 segment HS21C103. 58 0.001 1
(AL133492) Homo sapiens chromosome 21 sequence from PAC RP1-... 58 0.001 1
(AC160018) Mus musculus chromosome 8 clone RP23-109G15, *** ... 58 0.001 1
(AC155781) Oryctolagus cuniculus clone LB1-71N21, WORKING DR... 58 0.001 1
(AC137231) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 58 0.001 1
(AC137166) Rattus norvegicus clone CH230-unknown, WORKING DR... 58 0.001 1
(AC135527) Rattus norvegicus clone CH230-48I3, WORKING DRAFT... 58 0.001 1
(AC127650) Rattus norvegicus clone CH230-307M8, WORKING DRAF... 58 0.001 1
(AC121702) Rattus norvegicus clone CH230-386F17, *** SEQUENC... 58 0.001 1
(AC121478) Rattus norvegicus clone CH230-101O21, *** SEQUENC... 58 0.001 1
(AC117634) Mus musculus chromosome 17 clone RP23-202G20 map ... 58 0.001 1
(AC115141) Rattus norvegicus clone CH230-61P17, *** SEQUENCI... 58 0.001 1
(AC112734) Rattus norvegicus clone CH230-52J2, WORKING DRAFT... 58 0.001 1
(AC111636) Rattus norvegicus clone CH230-98D5, WORKING DRAFT... 58 0.001 1
(AC109982) Rattus norvegicus clone CH230-80I18, WORKING DRAF... 58 0.001 1
>(BJ406959) Dictyostelium discoideum cDNA clone:dds37c03, 3' end,
single read.
Length = 671
Score = 1328 bits (670), Expect = 0.0
Identities = 670/670 (100%)
Strand = Plus / Minus
Query: 687 catagcgatcagtttaattgatttggtaatgtttatttgggaaattatatacaatggcgg 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 catagcgatcagtttaattgatttggtaatgtttatttgggaaattatatacaatggcgg 612
Query: 747 atttgagccatggaaaaccaatccatggtttggaccaaactcttacactctattggatgt 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 atttgagccatggaaaaccaatccatggtttggaccaaactcttacactctattggatgt 552
Query: 807 gggcgcaaaatattcaccattgattttgaatggtgaatggtggagattctttactccaat 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gggcgcaaaatattcaccattgattttgaatggtgaatggtggagattctttactccaat 492
Query: 867 ctttttacatgttggtattttccattatctaatgaacatggtcactcaattacgtgttgg 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ctttttacatgttggtattttccattatctaatgaacatggtcactcaattacgtgttgg 432
Query: 927 tatgcaattggagagagcatatggtggtcatcgtatcgtgccaatttacttactttgtgg 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tatgcaattggagagagcatatggtggtcatcgtatcgtgccaatttacttactttgtgg 372
Query: 987 tgtcgctggtaacttgtgtagtgctatcatgttaccaaattcagttcaagtaggtgcttc 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tgtcgctggtaacttgtgtagtgctatcatgttaccaaattcagttcaagtaggtgcttc 312
Query: 1047 tggtgctatctttggatttttaggtgtacttttaacagatttaatcagaaattggagtgt 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tggtgctatctttggatttttaggtgtacttttaacagatttaatcagaaattggagtgt 252
Query: 1107 tttagctaaaccttggttaaattttggttcactattatttagtattataacttcttttgc 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tttagctaaaccttggttaaattttggttcactattatttagtattataacttcttttgc 192
Query: 1167 tgttggtttatttttaccaggtgttgataattttgcgcatttaggtggttttattgcagg 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tgttggtttatttttaccaggtgttgataattttgcgcatttaggtggttttattgcagg 132
Query: 1227 tattttaacagcagcaattttcttgccatcattaacaccaaagagagcaattggaaaacg 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tattttaacagcagcaattttcttgccatcattaacaccaaagagagcaattggaaaacg 72
Query: 1287 tttacttttacttatgattgtaattccattgactgtagcattatttgtagcattatttgt 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tttacttttacttatgattgtaattccattgactgtagcattatttgtagcattatttgt 12
Query: 1347 tgtattttat 1356
||||||||||
Sbjct: 11 tgtattttat 2
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,424,822,279
Number of extensions: 84854563
Number of successful extensions: 7358044
Number of sequences better than 10.0: 539
Length of query: 1468
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1444
Effective length of database: 97,308,875,965
Effective search space: 140514016893460
Effective search space used: 140514016893460
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| Homology vs Protein |
Query= Contig-U12124-1 (Contig-U12124-1Q) /CSM_Contig/Contig-U12124-1Q.Seq.d
(1468 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL163652_19(AL163652|pid:none) Arabidopsis thaliana DNA chromoso... 160 8e-38
AM434817_3(AM434817|pid:none) Vitis vinifera contig VV78X099660.... 155 4e-36
AM439771_2(AM439771|pid:none) Vitis vinifera contig VV78X072918.... 154 8e-36
EU970045_1(EU970045|pid:none) Zea mays clone 339014 membrane pro... 152 2e-35
EU973622_1(EU973622|pid:none) Zea mays clone 403131 membrane pro... 151 5e-35
BT051972_1(BT051972|pid:none) Medicago truncatula clone MTYF9_FA... 151 7e-35
AK228551_1(AK228551|pid:none) Arabidopsis thaliana mRNA for hypo... 150 1e-34
AB195671_1(AB195671|pid:none) Arabidopsis thaliana mRNA for Rhom... 149 3e-34
AC149494_15(AC149494|pid:none) Medicago truncatula clone mth2-11... 147 7e-34
BT043212_1(BT043212|pid:none) Zea mays full-length cDNA clone ZM... 147 1e-33
L13655_1(L13655|pid:none) Saccharum hybrid cultivar H65-7052 mem... 145 3e-33
AK061443_1(AK061443|pid:none) Oryza sativa Japonica Group cDNA c... 145 3e-33
AK059988_1(AK059988|pid:none) Oryza sativa Japonica Group cDNA c... 144 6e-33
BT040613_1(BT040613|pid:none) Zea mays full-length cDNA clone ZM... 144 8e-33
BT039523_1(BT039523|pid:none) Zea mays full-length cDNA clone ZM... 143 1e-32
AK061038_1(AK061038|pid:none) Oryza sativa Japonica Group cDNA c... 140 1e-31
AC079029_15(AC079029|pid:none) Oryza sativa chromosome 10 BAC OS... 140 1e-31
CR855165_8(CR855165|pid:none) Oryza sativa genomic DNA, chromoso... 138 6e-31
BT038461_1(BT038461|pid:none) Zea mays full-length cDNA clone ZM... 138 6e-31
AK099082_1(AK099082|pid:none) Oryza sativa Japonica Group cDNA c... 137 8e-31
AC025417_28(AC025417|pid:none) Genomic sequence for Arabidopsis ... 136 2e-30
AL132960_8(AL132960|pid:none) Arabidopsis thaliana DNA chromosom... 135 4e-30
CP000922_885(CP000922|pid:none) Anoxybacillus flavithermus WK1, ... 135 5e-30
BC023469_1(BC023469|pid:none) Mus musculus rhomboid family 1 (Dr... 128 5e-28
(Q96CC6) RecName: Full=Rhomboid family member 1; AltName: Full=p... 127 8e-28
(B1MT31) RecName: Full=Rhomboid family member 1; 127 8e-28
(A7YWH9) RecName: Full=Rhomboid family member 1; &BC134588_1(BC... 127 1e-27
CR382128_928(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 126 2e-27
(Q6GMF8) RecName: Full=Rhomboid family member 1; &BC074097_1(BC... 124 9e-27
AL031018_25(AL031018|pid:none) Arabidopsis thaliana DNA chromoso... 124 9e-27
AL451021_8(AL451021|pid:none) Neurospora crassa DNA linkage grou... 124 1e-26
BA000028_1923(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 124 1e-26
EU038226_1(EU038226|pid:none) Lactobacillus reuteri rhomboid fam... 123 2e-26
CP001638_2136(CP001638|pid:none) Geobacillus sp. WCH70, complete... 122 3e-26
BT059254_1(BT059254|pid:none) Salmo salar clone ssal-rgf-536-225... 122 3e-26
BA000004_1421(BA000004|pid:none) Bacillus halodurans C-125 DNA, ... 122 4e-26
AP007281_1141(AP007281|pid:none) Lactobacillus reuteri JCM 1112 ... 122 4e-26
(A0JPA1) RecName: Full=Rhomboid family member 2; &BC127321_1(BC... 121 6e-26
AY016023_5(AY016023|pid:none) Sphoeroides nephelus alpha globin ... 121 6e-26
AL009126_2580(AL009126|pid:none) Bacillus subtilis subsp. subtil... 121 7e-26
AE006462_4(AE006462|pid:none) Homo sapiens 16p13.3 sequence sect... 120 1e-25
(Q00M95) RecName: Full=Rhomboid family member 2; AltName: Full=R... 120 1e-25
CP000416_954(CP000416|pid:none) Lactobacillus brevis ATCC 367, c... 120 1e-25
AK025994_1(AK025994|pid:none) Homo sapiens cDNA: FLJ22341 fis, c... 120 1e-25
(Q80WQ6) RecName: Full=Rhomboid family member 2; AltName: Full=R... 120 1e-25
CP000813_2186(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 119 4e-25
AK028872_1(AK028872|pid:none) Mus musculus 10 days neonate skin ... 118 5e-25
AK292166_1(AK292166|pid:none) Homo sapiens cDNA FLJ76925 complet... 118 5e-25
AP006627_1718(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 117 8e-25
CP000879_206(CP000879|pid:none) Petrotoga mobilis SJ95, complete... 117 1e-24
BA000043_2446(BA000043|pid:none) Geobacillus kaustophilus HTA426... 116 2e-24
CP000089_2362(CP000089|pid:none) Dechloromonas aromatica RCB, co... 115 3e-24
AY016021_3(AY016021|pid:none) Mus musculus clone 03245 alpha glo... 114 9e-24
AE017333_2545(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 112 3e-23
CR382139_428(CR382139|pid:none) Debaryomyces hansenii strain CBS... 112 3e-23
CP001615_550(CP001615|pid:none) Exiguobacterium sp. AT1b, comple... 112 4e-23
CP000423_1568(CP000423|pid:none) Lactobacillus casei ATCC 334, c... 111 6e-23
AP008937_1281(AP008937|pid:none) Lactobacillus fermentum IFO 395... 111 8e-23
CP000103_2442(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 111 8e-23
AE016830_2601(AE016830|pid:none) Enterococcus faecalis V583, com... 110 1e-22
AM270350_3(AM270350|pid:none) Aspergillus niger contig An15c0230... 109 2e-22
CU640366_274(CU640366|pid:none) Podospora anserina genomic DNA c... 109 3e-22
CP001078_673(CP001078|pid:none) Clostridium botulinum E3 str. Al... 108 4e-22
AY587209_1(AY587209|pid:none) Toxoplasma gondii rhomboid proteas... 108 5e-22
(Q6IUY1) RecName: Full=Rhomboid-like protease 3; EC=3.4... 108 5e-22
CP000916_80(CP000916|pid:none) Thermotoga neapolitana DSM 4359, ... 108 6e-22
CP000503_3224(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 107 8e-22
DQ489736_1142(DQ489736|pid:none) Leuconostoc citreum KM20, compl... 107 8e-22
CP000681_902(CP000681|pid:none) Shewanella putrefaciens CN-32, c... 107 8e-22
CP000414_612(CP000414|pid:none) Leuconostoc mesenteroides subsp.... 107 1e-21
FN392321_961(FN392321|pid:none) Pichia pastoris GS115 chromosome... 107 1e-21
FM242711_1320(FM242711|pid:none) Listeria monocytogenes Clip8145... 107 1e-21
DQ986368_1(DQ986368|pid:none) Synthetic construct rhomboid-1 gen... 106 2e-21
AI1241(AI1241) B. subtilis yqgP homolog lmo1337 [imported] - Lis... 106 2e-21
CP000233_536(CP000233|pid:none) Lactobacillus salivarius UCC118,... 105 3e-21
CP000812_845(CP000812|pid:none) Thermotoga lettingae TMO, comple... 105 3e-21
CP000382_674(CP000382|pid:none) Clostridium novyi NT, complete g... 105 5e-21
AE015928_1807(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 105 5e-21
CP000568_1038(CP000568|pid:none) Clostridium thermocellum ATCC 2... 105 5e-21
CP001348_1820(CP001348|pid:none) Clostridium cellulolyticum H10,... 104 9e-21
AE015927_436(AE015927|pid:none) Clostridium tetani E88, complete... 103 1e-20
CP000702_334(CP000702|pid:none) Thermotoga petrophila RKU-1, com... 103 1e-20
CP000771_957(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 103 2e-20
AM910987_30(AM910987|pid:none) Plasmodium knowlesi strain H chro... 103 2e-20
AP008230_1625(AP008230|pid:none) Desulfitobacterium hafniense Y5... 102 5e-20
FN357304_52(FN357304|pid:none) Schistosoma mansoni genome sequen... 102 5e-20
CP000891_987(CP000891|pid:none) Shewanella baltica OS195, comple... 102 5e-20
CP000033_1415(CP000033|pid:none) Lactobacillus acidophilus NCFM,... 101 6e-20
CP000716_528(CP000716|pid:none) Thermosipho melanesiensis BI429,... 101 8e-20
FM992688_1135(FM992688|pid:none) Candida dubliniensis CD36 chrom... 100 1e-19
AE015929_1235(AE015929|pid:none) Staphylococcus epidermidis ATCC... 100 1e-19
CP001581_409(CP001581|pid:none) Clostridium botulinum A2 str. Ky... 100 2e-19
CP000728_400(CP000728|pid:none) Clostridium botulinum F str. Lan... 100 2e-19
CP000725_160(CP000725|pid:none) Streptococcus gordonii str. Chal... 100 2e-19
AC009243_7(AC009243|pid:none) Genomic sequence for Arabidopsis t... 100 2e-19
CP000721_4246(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 100 2e-19
CP000563_3325(CP000563|pid:none) Shewanella baltica OS155, compl... 100 2e-19
BA000033_1501(BA000033|pid:none) Staphylococcus aureus subsp. au... 99 3e-19
AJ938182_1421(AJ938182|pid:none) Staphylococcus aureus RF122 com... 99 3e-19
CP000253_1553(CP000253|pid:none) Staphylococcus aureus subsp. au... 99 3e-19
CP000804_1057(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 99 4e-19
AP006716_1367(AP006716|pid:none) Staphylococcus haemolyticus JCS... 99 5e-19
AE001437_943(AE001437|pid:none) Clostridium acetobutylicum ATCC ... 99 5e-19
AP009049_2416(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 99 5e-19
AM412317_397(AM412317|pid:none) Clostridium botulinum A str. ATC... 99 5e-19
CP000413_1329(CP000413|pid:none) Lactobacillus gasseri ATCC 3332... 99 5e-19
AE017198_1409(AE017198|pid:none) Lactobacillus johnsonii NCC 533... 98 7e-19
(Q695U0) RecName: Full=Rhomboid-like protease 1; EC=3.4... 98 7e-19
DQ323509_1(DQ323509|pid:none) Eimeria tenella rhomboid-like prot... 98 9e-19
CP000686_3695(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 97 1e-18
AM910992_262(AM910992|pid:none) Plasmodium knowlesi strain H chr... 97 1e-18
CP000446_827(CP000446|pid:none) Shewanella sp. MR-4, complete ge... 97 2e-18
CP000473_315(CP000473|pid:none) Solibacter usitatus Ellin6076, c... 97 2e-18
CP000023_1705(CP000023|pid:none) Streptococcus thermophilus LMG ... 96 3e-18
AY704176_1(AY704176|pid:none) Toxoplasma gondii rhomboid 2 (ROM2... 96 3e-18
CP000024_1731(CP000024|pid:none) Streptococcus thermophilus CNRZ... 96 3e-18
CP000517_1213(CP000517|pid:none) Lactobacillus helveticus DPC 45... 96 3e-18
AE014186_131(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 96 3e-18
CP000419_1544(CP000419|pid:none) Streptococcus thermophilus LMD-... 96 3e-18
AM295250_1164(AM295250|pid:none) Staphylococcus carnosus subsp. ... 96 3e-18
CP000444_3172(CP000444|pid:none) Shewanella sp. MR-7, complete g... 96 4e-18
AE014299_986(AE014299|pid:none) Shewanella oneidensis MR-1, comp... 96 4e-18
CP000412_1193(CP000412|pid:none) Lactobacillus delbrueckii subsp... 96 4e-18
AE016823_2617(AE016823|pid:none) Leptospira interrogans serovar ... 96 4e-18
CR954253_1433(CR954253|pid:none) Lactobacillus delbrueckii subsp... 95 6e-18
CU914166_485(CU914166|pid:none) Ralstonia solanacearum strain IP... 95 6e-18
CU694393_227(CU694393|pid:none) Ralstonia solanacearum strain Mo... 95 7e-18
CP000407_2034(CP000407|pid:none) Streptococcus suis 05ZYH33, com... 94 1e-17
AP006840_1868(AP006840|pid:none) Symbiobacterium thermophilum IA... 94 1e-17
CP000909_737(CP000909|pid:none) Chloroflexus aurantiacus J-10-fl... 94 2e-17
(Q6GV23) RecName: Full=Rhomboid-like protease 5; EC=3.4... 94 2e-17
AE005176_170(AE005176|pid:none) Lactococcus lactis subsp. lactis... 93 2e-17
CP001472_3144(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 93 2e-17
EF085917_1(EF085917|pid:none) Picea sitchensis clone WS0289_B23 ... 93 3e-17
AL646053_1526(AL646053|pid:none) Ralstonia solanacearum GMI1000 ... 92 4e-17
(Q695T8) RecName: Full=Rhomboid-like protease 4; EC=3.4... 92 6e-17
AM486832_1(AM486832|pid:none) Vitis vinifera contig VV78X046426.... 91 1e-16
CP001398_1406(CP001398|pid:none) Thermococcus gammatolerans EJ3,... 90 2e-16
AJ248285_31(AJ248285|pid:none) Pyrococcus abyssi complete genome... 90 2e-16
AY704175_1(AY704175|pid:none) Toxoplasma gondii rhomboid 4 (ROM4... 90 2e-16
CP000353_242(CP000353|pid:none) Ralstonia metallidurans CH34 meg... 89 3e-16
AM946015_1650(AM946015|pid:none) Streptococcus uberis 0140J comp... 88 7e-16
AJ400707_3(AJ400707|pid:none) Streptococcus uberis ORF2 (partial... 88 7e-16
AP006627_800(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, co... 88 9e-16
CR954205_223(CR954205|pid:none) Ostreococcus tauri strain OTTH05... 87 1e-15
CP000585_212(CP000585|pid:none) Ostreococcus lucimarinus CCE9901... 87 2e-15
EF145544_1(EF145544|pid:none) Populus trichocarpa clone WS01125_... 87 2e-15
AE009949_163(AE009949|pid:none) Streptococcus pyogenes MGAS8232,... 86 4e-15
CU928160_617(CU928160|pid:none) Escherichia coli IAI1 chromosome... 86 4e-15
CP000001_219(CP000001|pid:none) Bacillus cereus E33L, complete g... 86 4e-15
CP000800_658(CP000800|pid:none) Escherichia coli E24377A, comple... 86 4e-15
CP000017_191(CP000017|pid:none) Streptococcus pyogenes MGAS5005,... 86 4e-15
T31488(T31488)hypothetical protein Y116A8C.16 - Caenorhabditis e... 85 8e-15
AL117204_13(AL117204|pid:none) Caenorhabditis elegans YAC Y116A8... 85 8e-15
CP001063_514(CP001063|pid:none) Shigella boydii CDC 3083-94, com... 85 8e-15
AE009950_1228(AE009950|pid:none) Pyrococcus furiosus DSM 3638, c... 84 1e-14
CP000946_2926(CP000946|pid:none) Escherichia coli ATCC 8739, com... 84 1e-14
CU928158_2355(CU928158|pid:none) Escherichia fergusonii ATCC 354... 84 1e-14
CP000260_191(CP000260|pid:none) Streptococcus pyogenes MGAS10270... 84 2e-14
CP000082_1655(CP000082|pid:none) Psychrobacter arcticus 273-4, c... 82 4e-14
(P58872) RecName: Full=Rhomboid-related protein 3; EC=3... 82 5e-14
BC100977_1(BC100977|pid:none) Homo sapiens rhomboid, veinlet-lik... 82 5e-14
BA000004_517(BA000004|pid:none) Bacillus halodurans C-125 DNA, c... 82 6e-14
CP000252_1127(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 82 6e-14
CU928162_627(CU928162|pid:none) Escherichia coli ED1a chromosome... 82 6e-14
CP000468_570(CP000468|pid:none) Escherichia coli APEC O1, comple... 81 8e-14
CP000243_643(CP000243|pid:none) Escherichia coli UTI89, complete... 81 8e-14
CP001177_230(CP001177|pid:none) Bacillus cereus AH187, complete ... 81 8e-14
CP000410_1774(CP000410|pid:none) Streptococcus pneumoniae D39, c... 81 8e-14
CU928161_659(CU928161|pid:none) Escherichia coli S88 chromosome,... 81 8e-14
AE005672_1988(AE005672|pid:none) Streptococcus pneumoniae TIGR4,... 81 8e-14
CP000323_1883(CP000323|pid:none) Psychrobacter cryohalolentis K5... 81 1e-13
CP000903_226(CP000903|pid:none) Bacillus weihenstephanensis KBAB... 81 1e-13
CP000509_18(CP000509|pid:none) Nocardioides sp. JS614, complete ... 81 1e-13
AE016877_220(AE016877|pid:none) Bacillus cereus ATCC 14579, comp... 80 1e-13
CP000227_239(CP000227|pid:none) Bacillus cereus Q1, complete gen... 80 1e-13
AB005231_4(AB005231|pid:none) Arabidopsis thaliana genomic DNA, ... 80 2e-13
CP001159_33(CP001159|pid:none) Thalassiosira pseudonana CCMP1335... 80 2e-13
AE017194_269(AE017194|pid:none) Bacillus cereus ATCC 10987, comp... 80 2e-13
CP001172_2577(CP001172|pid:none) Acinetobacter baumannii AB307-0... 80 2e-13
CU468230_2302(CU468230|pid:none) Acinetobacter baumannii str. SD... 80 2e-13
BC084362_1(BC084362|pid:none) Xenopus laevis hypothetical LOC495... 79 3e-13
FN357329_25(FN357329|pid:none) Schistosoma mansoni genome sequen... 79 3e-13
CP000667_4424(CP000667|pid:none) Salinispora tropica CNB-440, co... 79 4e-13
AK242128_1(AK242128|pid:none) Oryza sativa Japonica Group cDNA, ... 79 4e-13
AB001488_45(AB001488|pid:none) Bacillus subtilis genome sequence... 79 5e-13
EU960239_1(EU960239|pid:none) Zea mays clone 222810 rhomboid-lik... 79 5e-13
BA000028_618(BA000028|pid:none) Oceanobacillus iheyensis HTE831 ... 79 5e-13
AP009484_1194(AP009484|pid:none) Macrococcus caseolyticus JCSC54... 79 5e-13
AP009493_3717(AP009493|pid:none) Streptomyces griseus subsp. gri... 79 5e-13
CP000656_1057(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 78 7e-13
CP000820_123(CP000820|pid:none) Frankia sp. EAN1pec, complete ge... 78 7e-13
DQ272385_2(DQ272385|pid:none) Myxococcus xanthus DigR (digR) gen... 78 9e-13
CP000114_396(CP000114|pid:none) Streptococcus agalactiae A909, c... 77 1e-12
BC048048_1(BC048048|pid:none) Danio rerio rhomboid, veinlet-like... 77 1e-12
AE016822_13(AE016822|pid:none) Leifsonia xyli subsp. xyli str. C... 77 1e-12
AE017221_1104(AE017221|pid:none) Thermus thermophilus HB27, comp... 77 1e-12
CP001129_206(CP001129|pid:none) Streptococcus equi subsp. zooepi... 77 1e-12
BC155111_1(BC155111|pid:none) Danio rerio hypothetical protein L... 77 2e-12
FM204884_1770(FM204884|pid:none) Streptococcus equi subsp. zooep... 77 2e-12
CS300691_1(CS300691|pid:none) Sequence 199 from Patent EP1661986. 77 2e-12
AE014298_1721(AE014298|pid:none) Drosophila melanogaster chromos... 77 2e-12
AK097621_1(AK097621|pid:none) Homo sapiens cDNA FLJ40302 fis, cl... 77 2e-12
AE014134_2255(AE014134|pid:none) Drosophila melanogaster chromos... 77 2e-12
FN318894_1(FN318894|pid:none) Schistosoma japonicum isolate Anhu... 77 2e-12
(Q9NX52) RecName: Full=Rhomboid-related protein 2; Shor... 77 2e-12
AE014298_1718(AE014298|pid:none) Drosophila melanogaster chromos... 77 2e-12
AK294115_1(AK294115|pid:none) Homo sapiens cDNA FLJ56342 complet... 77 2e-12
AP005393_29(AP005393|pid:none) Oryza sativa Japonica Group genom... 77 2e-12
AE014134_2256(AE014134|pid:none) Drosophila melanogaster chromos... 77 2e-12
CP001638_196(CP001638|pid:none) Geobacillus sp. WCH70, complete ... 76 4e-12
AE009948_402(AE009948|pid:none) Streptococcus agalactiae 2603V/R... 75 5e-12
AL766845_81(AL766845|pid:none) Streptococcus agalactiae NEM316 c... 75 5e-12
BC170807_1(BC170807|pid:none) Xenopus tropicalis rhomboid, veinl... 75 6e-12
AJ437025_1(AJ437025|pid:none) Danio rerio mRNA for ventrhoid tra... 75 6e-12
CP000885_41(CP000885|pid:none) Clostridium phytofermentans ISDg,... 75 6e-12
BC093439_1(BC093439|pid:none) Danio rerio rhomboid, veinlet-like... 75 6e-12
AC130811_36(AC130811|pid:none) Medicago truncatula clone mth2-26... 75 8e-12
CP000927_2804(CP000927|pid:none) Caulobacter sp. K31, complete g... 74 2e-11
CP001359_2956(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 74 2e-11
BC149360_1(BC149360|pid:none) Bos taurus rhomboid, veinlet-like ... 73 2e-11
AM236080_2955(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 73 2e-11
CP000859_1721(CP000859|pid:none) Desulfococcus oleovorans Hxd3, ... 73 3e-11
CP000560_446(CP000560|pid:none) Bacillus amyloliquefaciens FZB42... 73 3e-11
CP000968_547(CP000968|pid:none) Candidatus Korarchaeum cryptofil... 72 7e-11
CP000088_3061(CP000088|pid:none) Thermobifida fusca YX, complete... 71 9e-11
CP000580_5479(CP000580|pid:none) Mycobacterium sp. JLS, complete... 71 1e-10
CP000384_5130(CP000384|pid:none) Mycobacterium sp. MCS, complete... 71 1e-10
CP000507_732(CP000507|pid:none) Shewanella amazonensis SB2B, com... 70 1e-10
CP001287_3255(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 70 1e-10
AC079374_10(AC079374|pid:none) Arabidopsis thaliana chromosome 1... 70 2e-10
U61539_6(U61539|pid:none) Bacillus firmus OrfA gene, partial cds... 70 3e-10
AM746676_2418(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 70 3e-10
AM711867_11(AM711867|pid:none) Clavibacter michiganensis subsp. ... 70 3e-10
EU016668_26(EU016668|pid:none) Uncultured marine microorganism H... 70 3e-10
A34597(A34597) rhomboid protein - fruit fly (Drosophila melanoga... 69 3e-10
BA000030_6198(BA000030|pid:none) Streptomyces avermitilis MA-468... 69 3e-10
(P20350) RecName: Full=Protein rhomboid; EC=3.4.21.105;... 69 3e-10
CP000750_23(CP000750|pid:none) Kineococcus radiotolerans SRS3021... 69 4e-10
CP001618_20(CP001618|pid:none) Beutenbergia cavernae DSM 12333, ... 69 4e-10
CP000909_2938(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 69 6e-10
EU308594_1(EU308594|pid:none) Drosophila melanica rhomboid (rho)... 68 7e-10
AM039952_2901(AM039952|pid:none) Xanthomonas campestris pv. vesi... 68 7e-10
CP000698_1614(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 68 1e-09
AP008229_3107(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M... 68 1e-09
BA000043_227(BA000043|pid:none) Geobacillus kaustophilus HTA426 ... 67 1e-09
CP000487_846(CP000487|pid:none) Campylobacter fetus subsp. fetus... 67 2e-09
AD2297(AD2297) hypothetical protein alr3931 [imported] - Nostoc ... 67 2e-09
CP000472_807(CP000472|pid:none) Shewanella piezotolerans WP3, co... 67 2e-09
CP000304_2362(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 67 2e-09
CP000282_1731(CP000282|pid:none) Saccharophagus degradans 2-40, ... 67 2e-09
CP001291_693(CP001291|pid:none) Cyanothece sp. PCC 7424, complet... 67 2e-09
AE014295_1224(AE014295|pid:none) Bifidobacterium longum NCC2705,... 67 2e-09
CP001037_436(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 67 2e-09
CP000934_273(CP000934|pid:none) Cellvibrio japonicus Ueda107, co... 66 3e-09
CP000806_3729(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 66 3e-09
BX248354_27(BX248354|pid:none) Corynebacterium diphtheriae gravi... 66 4e-09
CP001140_269(CP001140|pid:none) Desulfurococcus kamchatkensis 12... 65 5e-09
CP000148_2360(CP000148|pid:none) Geobacter metallireducens GS-15... 65 5e-09
CP001341_14(CP001341|pid:none) Arthrobacter chlorophenolicus A6,... 65 5e-09
BX251410_9(BX251410|pid:none) Tropheryma whipplei TW08/27, compl... 65 5e-09
AE014184_9(AE014184|pid:none) Tropheryma whipplei str. Twist, co... 65 5e-09
CP000561_672(CP000561|pid:none) Pyrobaculum calidifontis JCM 115... 65 6e-09
AE017282_1419(AE017282|pid:none) Methylococcus capsulatus str. B... 65 6e-09
CP000891_944(CP000891|pid:none) Shewanella baltica OS195, comple... 65 6e-09
CP000804_2864(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 65 6e-09
AM746676_616(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 65 6e-09
CP000431_3656(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 65 6e-09
CP001252_917(CP001252|pid:none) Shewanella baltica OS223, comple... 65 6e-09
AE014296_263(AE014296|pid:none) Drosophila melanogaster chromoso... 65 8e-09
CP000854_296(CP000854|pid:none) Mycobacterium marinum M, complet... 65 8e-09
AK064977_1(AK064977|pid:none) Oryza sativa Japonica Group cDNA c... 64 1e-08
CP000504_1230(CP000504|pid:none) Pyrobaculum islandicum DSM 4184... 64 1e-08
CP000438_1932(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 64 1e-08
AP009044_49(AP009044|pid:none) Corynebacterium glutamicum R DNA,... 64 1e-08
CP000482_2153(CP000482|pid:none) Pelobacter propionicus DSM 2379... 64 1e-08
CP000874_85(CP000874|pid:none) Rhizobium sp. NGR234 plasmid pNGR... 64 1e-08
CT573073_745(CT573073|pid:none) Kuenenia stuttgartiensis genome ... 64 1e-08
CP000934_2114(CP000934|pid:none) Cellvibrio japonicus Ueda107, c... 64 1e-08
CP000325_3949(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 64 1e-08
CP000774_1877(CP000774|pid:none) Parvibaculum lavamentivorans DS... 64 2e-08
AE017282_2480(AE017282|pid:none) Methylococcus capsulatus str. B... 64 2e-08
BX294137_231(BX294137|pid:none) Rhodopirellula baltica SH 1 comp... 64 2e-08
AE013598_4487(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 64 2e-08
AP008229_4319(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M... 64 2e-08
AE008923_20(AE008923|pid:none) Xanthomonas axonopodis pv. citri ... 64 2e-08
CP000967_4931(CP000967|pid:none) Xanthomonas oryzae pv. oryzae P... 64 2e-08
CP000494_7323(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 64 2e-08
AP010904_2360(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 64 2e-08
AX065413_1(AX065413|pid:none) Sequence 539 from Patent WO0100844... 63 2e-08
FJ629573_1(FJ629573|pid:none) Synthetic construct Drosophila mel... 63 2e-08
AE014296_272(AE014296|pid:none) Drosophila melanogaster chromoso... 63 2e-08
CP001147_1621(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 63 2e-08
AP009152_12(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, co... 63 2e-08
CP000510_3279(CP000510|pid:none) Psychromonas ingrahamii 37, com... 63 2e-08
CP000249_4394(CP000249|pid:none) Frankia sp. CcI3, complete geno... 63 3e-08
CP001106_378(CP001106|pid:none) Eubacterium eligens ATCC 27750 p... 63 3e-08
CP000408_2040(CP000408|pid:none) Streptococcus suis 98HAH33, com... 63 3e-08
AP009493_5485(AP009493|pid:none) Streptomyces griseus subsp. gri... 63 3e-08
CP001390_1645(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 62 4e-08
CP000591_269(CP000591|pid:none) Ostreococcus lucimarinus CCE9901... 62 4e-08
FJ362376_4(FJ362376|pid:none) Caenorhabditis sp. PS1010 contig J... 62 4e-08
AM942444_51(AM942444|pid:none) Corynebacterium urealyticum DSM 7... 62 5e-08
CR543861_961(CR543861|pid:none) Acinetobacter sp. ADP1 complete ... 62 5e-08
CP000142_1171(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 62 5e-08
AE009441_762(AE009441|pid:none) Pyrobaculum aerophilum str. IM2,... 62 5e-08
CP000133_3735(CP000133|pid:none) Rhizobium etli CFN 42, complete... 62 7e-08
AE009442_309(AE009442|pid:none) Xylella fastidiosa Temecula1, co... 61 9e-08
AE003849_1051(AE003849|pid:none) Xylella fastidiosa 9a5c, comple... 61 9e-08
CP000968_1252(CP000968|pid:none) Candidatus Korarchaeum cryptofi... 61 9e-08
CP000961_768(CP000961|pid:none) Shewanella woodyi ATCC 51908, co... 61 9e-08
CP000941_326(CP000941|pid:none) Xylella fastidiosa M12, complete... 61 9e-08
CP000662_93(CP000662|pid:none) Rhodobacter sphaeroides ATCC 1702... 61 1e-07
CP001014_197(CP001014|pid:none) Thermoproteus neutrophilus V24St... 60 2e-07
CP000360_2012(CP000360|pid:none) Acidobacteria bacterium Ellin34... 60 2e-07
CP000148_1139(CP000148|pid:none) Geobacter metallireducens GS-15... 60 2e-07
AK074034_1(AK074034|pid:none) Homo sapiens mRNA for FLJ00080 pro... 60 2e-07
CP000148_2478(CP000148|pid:none) Geobacter metallireducens GS-15... 60 2e-07
AE003849_646(AE003849|pid:none) Xylella fastidiosa 9a5c, complet... 60 2e-07
CP000644_3994(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 60 2e-07
CP000489_2311(CP000489|pid:none) Paracoccus denitrificans PD1222... 60 3e-07
CP001103_69(CP001103|pid:none) Alteromonas macleodii 'Deep ecoty... 60 3e-07
AE004091_3087(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 60 3e-07
CP000230_3554(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 60 3e-07
AP009153_3814(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 60 3e-07
CP000159_664(CP000159|pid:none) Salinibacter ruber DSM 13855, co... 60 3e-07
AE006641_420(AE006641|pid:none) Sulfolobus solfataricus P2, comp... 60 3e-07
CP000660_237(CP000660|pid:none) Pyrobaculum arsenaticum DSM 1351... 60 3e-07
AL591688_2652(AL591688|pid:none) Sinorhizobium meliloti 1021 com... 60 3e-07
CP000660_263(CP000660|pid:none) Pyrobaculum arsenaticum DSM 1351... 60 3e-07
CP000769_989(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, co... 60 3e-07
CP000781_2345(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 59 3e-07
CP001101_2441(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 59 3e-07
CP001634_1365(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, c... 59 3e-07
CP000866_1631(CP000866|pid:none) Nitrosopumilus maritimus SCM1, ... 59 3e-07
BA000023_192(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA, ... 59 3e-07
CP001197_906(CP001197|pid:none) Desulfovibrio vulgaris str. 'Miy... 59 3e-07
AE006470_2192(AE006470|pid:none) Chlorobium tepidum TLS, complet... 59 4e-07
CP000749_2143(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 59 4e-07
CP001213_65(CP001213|pid:none) Bifidobacterium animalis subsp. l... 59 4e-07
CP000453_2061(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-... 59 4e-07
CP000472_4835(CP000472|pid:none) Shewanella piezotolerans WP3, c... 59 4e-07
CP000830_1193(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 59 4e-07
BT061079_1(BT061079|pid:none) Zea mays full-length cDNA clone ZM... 59 6e-07
EU975704_1(EU975704|pid:none) Zea mays clone 497509 unknown mRNA. 59 6e-07
AB236804_1(AB236804|pid:none) Trifolium pratense RNA for hypothe... 59 6e-07
CP000027_127(CP000027|pid:none) Dehalococcoides ethenogenes 195,... 59 6e-07
CP001145_548(CP001145|pid:none) Coprothermobacter proteolyticus ... 59 6e-07
CP000768_645(CP000768|pid:none) Campylobacter jejuni subsp. doyl... 59 6e-07
CP000613_2569(CP000613|pid:none) Rhodospirillum centenum SW, com... 59 6e-07
CP000575_730(CP000575|pid:none) Staphylothermus marinus F1, comp... 59 6e-07
BA000012_144(BA000012|pid:none) Mesorhizobium loti MAFF303099 DN... 58 8e-07
CP001100_779(CP001100|pid:none) Chloroherpeton thalassium ATCC 3... 58 8e-07
CP001074_4003(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 58 8e-07
CP001628_63(CP001628|pid:none) Micrococcus luteus NCTC 2665, com... 58 1e-06
CP000814_938(CP000814|pid:none) Campylobacter jejuni subsp. jeju... 58 1e-06
CP001616_143(CP001616|pid:none) Tolumonas auensis DSM 9187, comp... 58 1e-06
AJ965256_128(AJ965256|pid:none) Dehalococcoides sp. CBDB1 comple... 58 1e-06
CP000851_104(CP000851|pid:none) Shewanella pealeana ATCC 700345,... 58 1e-06
CP001087_2822(CP001087|pid:none) Desulfobacterium autotrophicum ... 58 1e-06
AE008691_367(AE008691|pid:none) Thermoanaerobacter tengcongensis... 58 1e-06
CP000462_96(CP000462|pid:none) Aeromonas hydrophila subsp. hydro... 57 1e-06
CP001071_774(CP001071|pid:none) Akkermansia muciniphila ATCC BAA... 57 1e-06
AC135422_3(AC135422|pid:none) Oryza sativa (japonica cultivar-gr... 57 1e-06
AE000520_972(AE000520|pid:none) Treponema pallidum subsp. pallid... 57 1e-06
CP000448_1984(CP000448|pid:none) Syntrophomonas wolfei subsp. wo... 57 2e-06
CP000361_575(CP000361|pid:none) Arcobacter butzleri RM4018, comp... 57 2e-06
AP009389_2662(AP009389|pid:none) Pelotomaculum thermopropionicum... 57 2e-06
AK228048_1(AK228048|pid:none) Arabidopsis thaliana mRNA for hypo... 57 2e-06
CP001601_23(CP001601|pid:none) Corynebacterium aurimucosum ATCC ... 57 2e-06
CP000860_1107(CP000860|pid:none) Candidatus Desulforudis audaxvi... 57 2e-06
EU965249_1(EU965249|pid:none) Zea mays clone 284824 rhomboid fam... 57 2e-06
CP000473_4750(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 57 2e-06
AM236080_4319(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 57 2e-06
CP000682_2132(CP000682|pid:none) Metallosphaera sedula DSM 5348,... 57 2e-06
AE016853_3704(AE016853|pid:none) Pseudomonas syringae pv. tomato... 56 3e-06
AP009493_5364(AP009493|pid:none) Streptomyces griseus subsp. gri... 56 3e-06
BA000045_4263(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 56 3e-06
(O88779) RecName: Full=Rhomboid-related protein 1; Shor... 56 3e-06
AE009441_778(AE009441|pid:none) Pyrobaculum aerophilum str. IM2,... 56 4e-06
CP000112_1444(CP000112|pid:none) Desulfovibrio desulfuricans G20... 56 4e-06
AE017340_266(AE017340|pid:none) Idiomarina loihiensis L2TR, comp... 55 5e-06
CP001291_4068(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 55 5e-06
EU016633_4(EU016633|pid:none) Uncultured Group I marine crenarch... 55 5e-06
AM910995_367(AM910995|pid:none) Plasmodium knowlesi strain H chr... 55 5e-06
AM180088_238(AM180088|pid:none) Haloquadratum walsbyi DSM 16790 ... 55 5e-06
CP000144_340(CP000144|pid:none) Rhodobacter sphaeroides 2.4.1 ch... 55 6e-06
AE017180_1655(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 55 6e-06
CP000058_3434(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 55 6e-06
CP000924_1839(CP000924|pid:none) Thermoanaerobacter pseudethanol... 55 6e-06
CP000300_784(CP000300|pid:none) Methanococcoides burtonii DSM 62... 55 8e-06
AM942759_2904(AM942759|pid:none) Proteus mirabilis strain HI4320... 55 8e-06
CP000251_951(CP000251|pid:none) Anaeromyxobacter dehalogenans 2C... 55 8e-06
AL939111_60(AL939111|pid:none) Streptomyces coelicolor A3(2) com... 55 8e-06
CP000383_284(CP000383|pid:none) Cytophaga hutchinsonii ATCC 3340... 55 8e-06
AE010299_3756(AE010299|pid:none) Methanosarcina acetivorans str.... 54 1e-05
CP000792_987(CP000792|pid:none) Campylobacter concisus 13826, co... 54 1e-05
CP000713_307(CP000713|pid:none) Psychrobacter sp. PRwf-1, comple... 54 1e-05
CP000252_55(CP000252|pid:none) Syntrophus aciditrophicus SB, com... 54 1e-05
CP000738_2501(CP000738|pid:none) Sinorhizobium medicae WSM419, c... 54 1e-05
CP000264_3255(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 54 1e-05
CR931997_34(CR931997|pid:none) Corynebacterium jeikeium K411 com... 54 1e-05
BA000045_81(BA000045|pid:none) Gloeobacter violaceus PCC 7421 DN... 54 1e-05
CU928175_531(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 54 2e-05
BX571966_1138(BX571966|pid:none) Burkholderia pseudomallei strai... 54 2e-05
AP006840_1995(AP006840|pid:none) Symbiobacterium thermophilum IA... 54 2e-05
CP000011_991(CP000011|pid:none) Burkholderia mallei ATCC 23344 c... 54 2e-05
CP000777_956(CP000777|pid:none) Leptospira biflexa serovar Patoc... 54 2e-05
CP000573_1473(CP000573|pid:none) Burkholderia pseudomallei 1106a... 54 2e-05
CP000142_676(CP000142|pid:none) Pelobacter carbinolicus DSM 2380... 54 2e-05
AL111168_940(AL111168|pid:none) Campylobacter jejuni subsp. jeju... 54 2e-05
CP000828_2640(CP000828|pid:none) Acaryochloris marina MBIC11017,... 53 2e-05
CP000612_2852(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 53 2e-05
CP001099_2035(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 53 2e-05
CP000077_423(CP000077|pid:none) Sulfolobus acidocaldarius DSM 63... 53 2e-05
CP000555_1129(CP000555|pid:none) Methylibium petroleiphilum PM1,... 53 2e-05
CP000774_2638(CP000774|pid:none) Parvibaculum lavamentivorans DS... 53 2e-05
AE004439_1438(AE004439|pid:none) Pasteurella multocida subsp. mu... 53 2e-05
CP001110_2691(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 53 3e-05
CP001230_407(CP001230|pid:none) Persephonella marina EX-H1, comp... 53 3e-05
AE017283_896(AE017283|pid:none) Propionibacterium acnes KPA17120... 53 3e-05
AK294136_1(AK294136|pid:none) Homo sapiens cDNA FLJ50740 complet... 53 3e-05
CP001251_1268(CP001251|pid:none) Dictyoglomus turgidum DSM 6724,... 52 4e-05
CP001032_978(CP001032|pid:none) Opitutus terrae PB90-1, complete... 52 4e-05
EU016584_10(EU016584|pid:none) Uncultured marine microorganism H... 52 4e-05
CP000769_1563(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 52 4e-05
CP000239_1815(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 52 4e-05
AP009153_3894(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 52 4e-05
BA000035_30(BA000035|pid:none) Corynebacterium efficiens YS-314 ... 52 5e-05
CP001131_1007(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 52 5e-05
CP000099_195(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 52 5e-05
CP000082_278(CP000082|pid:none) Psychrobacter arcticus 273-4, co... 52 5e-05
AP008231_2259(AP008231|pid:none) Synechococcus elongatus PCC 630... 52 5e-05
CR382124_634(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 52 7e-05
AE2410(AE2410) hypothetical protein alr4837 [imported] - Nostoc ... 52 7e-05
AE008384_682(AE008384|pid:none) Methanosarcina mazei strain Goe1... 52 7e-05
AL844509_567(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 52 7e-05
CP001150_477(CP001150|pid:none) Rhodobacter sphaeroides KD131 ch... 51 9e-05
CP001365_595(CP001365|pid:none) Halorubrum lacusprofundi ATCC 49... 51 9e-05
AP009387_243(AP009387|pid:none) Burkholderia multivorans ATCC 17... 51 9e-05
AE014299_4543(AE014299|pid:none) Shewanella oneidensis MR-1, com... 51 9e-05
CP000108_43(CP000108|pid:none) Chlorobium chlorochromatii CaD3, ... 51 9e-05
CP000393_548(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 51 9e-05
CP000698_955(CP000698|pid:none) Geobacter uraniireducens Rf4, co... 51 9e-05
AY157498_12(AY157498|pid:none) Synechococcus sp. PCC 7942 cosmid... 51 9e-05
AE005673_2607(AE005673|pid:none) Caulobacter crescentus CB15, co... 51 1e-04
CU928169_221(CU928169|pid:none) Kluyveromyces thermotolerans str... 51 1e-04
CP000301_3092(CP000301|pid:none) Rhodopseudomonas palustris BisB... 51 1e-04
CP000158_328(CP000158|pid:none) Hyphomonas neptunium ATCC 15444,... 51 1e-04
CT573073_210(CT573073|pid:none) Kuenenia stuttgartiensis genome ... 51 1e-04
CU914166_924(CU914166|pid:none) Ralstonia solanacearum strain IP... 51 1e-04
CP001146_1162(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 51 1e-04
CP000493_396(CP000493|pid:none) Hyperthermus butylicus DSM 5456,... 51 1e-04
AM286690_686(AM286690|pid:none) Alcanivorax borkumensis SK2, com... 51 1e-04
CU695240_463(CU695240|pid:none) Ralstonia solanacearum strain Mo... 51 1e-04
CR378663_141(CR378663|pid:none) Photobacterium profundum SS9; se... 51 1e-04
CP000465_28(CP000465|pid:none) Roseobacter denitrificans OCh 114... 51 1e-04
CP000767_951(CP000767|pid:none) Campylobacter curvus 525.92, com... 50 2e-04
CP000514_3666(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 50 2e-04
AE004437_282(AE004437|pid:none) Halobacterium sp. NRC-1, complet... 50 2e-04
CP001080_1475(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP... 50 2e-04
CP000781_2145(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 50 2e-04
CP000492_2642(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 50 2e-04
CP000282_1223(CP000282|pid:none) Saccharophagus degradans 2-40, ... 50 2e-04
CP000507_95(CP000507|pid:none) Shewanella amazonensis SB2B, comp... 50 2e-04
CR936257_577(CR936257|pid:none) Natronomonas pharaonis DSM 2160 ... 50 2e-04
CP000057_767(CP000057|pid:none) Haemophilus influenzae 86-028NP,... 50 2e-04
CP001229_10(CP001229|pid:none) Sulfurihydrogenibium azorense Az-... 50 2e-04
CP000143_750(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 ch... 50 2e-04
CP000671_380(CP000671|pid:none) Haemophilus influenzae PittEE, c... 50 2e-04
CP001087_2812(CP001087|pid:none) Desulfobacterium autotrophicum ... 50 2e-04
(P44783) RecName: Full=Rhomboid protease glpG; EC=3.4.2... 50 2e-04
AE004092_162(AE004092|pid:none) Streptococcus pyogenes M1 GAS, c... 50 2e-04
CP000577_830(CP000577|pid:none) Rhodobacter sphaeroides ATCC 170... 50 2e-04
CP000096_2074(CP000096|pid:none) Pelodictyon luteolum DSM 273, c... 50 3e-04
AY811315_1(AY811315|pid:none) Schistosoma japonicum SJCHGC05349 ... 50 3e-04
AE007870_584(AE007870|pid:none) Agrobacterium tumefaciens str. C... 50 3e-04
CP001344_239(CP001344|pid:none) Cyanothece sp. PCC 7425, complet... 50 3e-04
CP001114_1743(CP001114|pid:none) Deinococcus deserti VCD115, com... 49 4e-04
CP000444_3966(CP000444|pid:none) Shewanella sp. MR-7, complete g... 49 4e-04
CP000127_872(CP000127|pid:none) Nitrosococcus oceani ATCC 19707,... 49 4e-04
CP000469_4079(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 49 4e-04
CP000085_1293(CP000085|pid:none) Burkholderia thailandensis E264... 49 5e-04
CP000446_3884(CP000446|pid:none) Shewanella sp. MR-4, complete g... 49 5e-04
CP001097_2426(CP001097|pid:none) Chlorobium limicola DSM 245, co... 49 6e-04
BA000030_2234(BA000030|pid:none) Streptomyces avermitilis MA-468... 49 6e-04
CP000139_958(CP000139|pid:none) Bacteroides vulgatus ATCC 8482, ... 49 6e-04
CP000886_4251(CP000886|pid:none) Salmonella enterica subsp. ente... 48 8e-04
CP000031_2942(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 48 8e-04
AE000657_920(AE000657|pid:none) Aquifex aeolicus VF5, complete g... 48 8e-04
CP000503_47(CP000503|pid:none) Shewanella sp. W3-18-1, complete ... 48 8e-04
FM177140_710(FM177140|pid:none) Lactobacillus casei BL23 complet... 48 0.001
BA000012_2683(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 48 0.001
CP000916_1482(CP000916|pid:none) Thermotoga neapolitana DSM 4359... 48 0.001
AE015924_1203(AE015924|pid:none) Porphyromonas gingivalis W83, c... 48 0.001
AM286690_636(AM286690|pid:none) Alcanivorax borkumensis SK2, com... 48 0.001
BX572604_19(BX572604|pid:none) Rhodopseudomonas palustris CGA009... 48 0.001
CP000140_930(CP000140|pid:none) Parabacteroides distasonis ATCC ... 48 0.001
CP000472_2269(CP000472|pid:none) Shewanella piezotolerans WP3, c... 48 0.001
CP001393_2601(CP001393|pid:none) Anaerocellum thermophilum DSM 6... 47 0.001
>AL163652_19(AL163652|pid:none) Arabidopsis thaliana DNA chromosome 5,
BAC clone T28J14 (ESSA project).
&AY058157_1(AY058157|pid:none)
&AY098983_1(AY098983|pid:none) &T48496(T48496)
Length = 346
Score = 160 bits (406), Expect = 8e-38
Identities = 90/242 (37%), Positives = 140/242 (57%), Gaps = 16/242 (6%)
Frame = +1
Query: 748 FEPWKTNPWFGPNSYTLLDVGA-KYSPLILNGEWWRFFTPIFLHVGIFHYLMNMVTQLRV 924
FEP +TNP FGP+S+TL +GA ++S ++ E WR T I+LH G+ H NM++ + +
Sbjct: 101 FEPLRTNPLFGPSSHTLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSLVFI 160
Query: 925 GMQLERAYGGHRIVPIYLLCGVAGNLCSAIMLPNSVQVGASGAIFGFLGVLLTDLIRNWS 1104
G++LE+ +G RI IYLL G+ G++ S++ + NS+ VGASGA+FG LG +L++L NW+
Sbjct: 161 GIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFIRNSISVGASGALFGLLGSMLSELFTNWT 220
Query: 1105 VLAKPWLNFGSLLFSIITSFAVGLFLPGVDNFAHLGGFIAGILTAAIFL----------- 1251
+ + +LLF I+ + A+G+ LP VDNFAH+GGF+ G L I L
Sbjct: 221 IYSNKIAALLTLLFVILINLAIGI-LPHVDNFAHVGGFVTGFLLGFILLARPQFKWLARE 279
Query: 1252 --PSLTPKRAIGK--RLLLLMIVIPLTXXXXXXXXXXXYKNIDADEWCFGCKYITCLQVL 1419
P TP R K + LL ++ + L ++ + ++ C C Y+ C+
Sbjct: 280 HMPQGTPLRYKYKTYQYLLWLLSLVLLIAGFVVALLMLFRGENGNDHCRWCHYLRCVPTS 339
Query: 1420 SW 1425
SW
Sbjct: 340 SW 341
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,917,678,070
Number of extensions: 36946563
Number of successful extensions: 99154
Number of sequences better than 10.0: 730
Number of HSP's gapped: 98284
Number of HSP's successfully gapped: 736
Length of query: 489
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 356
Effective length of database: 620,718,517
Effective search space: 220975792052
Effective search space used: 220975792052
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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