| Contig-U12091-1 |
| Contig ID |
Contig-U12091-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1536 |
| Chromosome number (1..6, M) |
5 |
| Chromosome length |
5062330 |
| Start point |
2647102 |
| End point |
2645648 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
90 |
| Number of EST |
130 |
| Link to clone list |
U12091 |
| List of clone(s) |
est1=CHJ452F,1,148
est2=CHR759F,1,148
est3=SHG892F,1,148
est4=VFB870F,149,740
est5=VFN468F,256,383
est6=SFI709F,271,652
est7=VFC338F,287,634
est8=VFC331F,289,821
est9=VFL823E,289,1528
est10=VFM108F,289,800
est11=VFM745F,289,649
est12=VFG582E,290,1514
est13=VFH155F,290,764
est14=VFL329E,290,1530
est15=VFC218F,293,787
est16=VFI182E,293,1521
est17=VFM476F,293,780
est18=VFK429E,294,1497
est19=CHC147F,301,684
est20=VFB169F,303,822
est21=VFH491F,303,818
est22=VFI559E,304,1529
est23=VFD453E,305,1498
est24=VFL514F,305,742
est25=VFN652F,305,917
est26=SFB560F,306,818
est27=SFA668F,307,939
est28=VFA615E,307,1508
est29=VFC670E,307,1528
est30=VFD147E,307,1527
est31=VFD861E,307,1528
est32=VFE786F,307,850
est33=VFF311F,307,787
est34=VFF705F,307,893
est35=VFG124E,307,1532
est36=VFI248F,307,819
est37=VFI854F,307,820
est38=VFK247F,307,896
est39=VFK537E,307,1530
est40=VFK640E,307,1521
est41=VFN571F,307,937
est42=VFN784F,307,858
est43=SFF407F,308,550
est44=VFH192F,308,816
est45=VFI610E,308,1530
est46=VFJ416E,308,1516
est47=VFJ730E,308,1508
est48=VFO376F,308,862
est49=SFJ809E,310,1518
est50=VFB676E,310,1529
est51=VFE168E,310,1532
est52=VFE814E,310,1530
est53=VFF756E,310,1530
est54=VFG179F,310,876
est55=VFI644E,310,1520
est56=VFI790E,310,1522
est57=VFK173F,310,898
est58=VFM179F,310,898
est59=VFM595F,310,896
est60=VFN887F,310,943
est61=VFO524F,310,818
est62=VFK377F,311,827
est63=VFB306F,313,860
est64=VFK888E,313,1521
est65=VFD201F,314,819
est66=VFA302E,315,1508
est67=VFA575F,315,919
est68=VFN492F,315,897
est69=VFL167E,318,1520
est70=VSF518F,319,820
est71=VFN581F,324,947
est72=VFO316F,326,856
est73=VFE833F,337,701
est74=VSJ766E,337,1532
est75=VFH850F,356,802
est76=SLI861Z,422,991
est77=VSI385E,531,1519
est78=SSJ291Z,707,1530
est79=VFJ150Z,750,1516
est80=VFI854Z,779,1535
est81=SFI709Z,780,1518
est82=VFB465Z,781,1106
est83=VFL514Z,788,1530
est84=VFB870Z,794,1530
est85=VFO524Z,799,1499
est86=CHC147Z,802,1441
est87=VFD201Z,808,1499
est88=VFI248Z,809,1507
est89=VFO316Z,816,1512
est90=VFM179Z,817,1504
est91=SLB761Z,825,1530
est92=VFH850Z,832,1529
est93=VFM108Z,835,1527
est94=VFL736Z,836,1529
est95=SLB806Z,839,1496
est96=VFF311Z,844,1531
est97=VFH155Z,847,1489
est98=VFB306Z,848,1420
est99=SSF734Z,855,1535
est100=VFB169Z,867,1498
est101=SHG892Z,870,1524
est102=VFH192Z,875,1490
est103=SFF407Z,881,1487
est104=VFN784Z,883,1456
est105=VFA575Z,886,1522
est106=VFN492Z,886,1529
est107=SSJ859Z,892,1529
est108=VFG179Z,898,1529
est109=VSJ564F,904,1546
est110=VSJ564Z,904,1522
est111=VFE786Z,912,1532
est112=VSB617Z,927,1539
est113=VFN581Z,933,1462
est114=VFE833Z,934,1522
est115=VFC331Z,937,1509
est116=VFN571Z,937,1502
est117=SFA668Z,944,1498
est118=VFH491Z,960,1490
est119=VSF518Z,964,1521
est120=VFM595Z,985,1476
est121=VFM745Z,1054,1497
est122=VFL536Z,1091,1440
est123=VFC218Z,1100,1490
est124=SLA689Z,1102,1525
est125=VFC338Z,1113,1489
est126=VFK173Z,1115,1508
est127=VFK377Z,1159,1444
est128=VFO376Z,1211,1369
est129=SLF527Z,1258,1530
est130=VFM476Z,1319,1487
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.29 |
| Homology vs DNA |
Query= Contig-U12091-1 (Contig-U12091-1Q) /CSM_Contig/Contig-U12091-1Q.Seq.d
(1546 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(J03515) Slime mold (D.discoideum) severin mRNA, complete cds. 1132 0.0 8
(AU270443) Dictyostelium discoideum vegetative cDNA clone:VS... 1132 0.0 2
(AU034013) Dictyostelium discoideum slug cDNA, clone SLB806. 1132 0.0 2
(C93067) Dictyostelium discoideum slug cDNA, clone SSF734. 1132 0.0 2
(BJ436166) Dictyostelium discoideum cDNA clone:ddv30o05, 3' ... 1132 0.0 4
(BJ435976) Dictyostelium discoideum cDNA clone:ddv29p03, 3' ... 1132 0.0 3
(BJ434861) Dictyostelium discoideum cDNA clone:ddv25o01, 3' ... 1132 0.0 2
(BJ434589) Dictyostelium discoideum cDNA clone:ddv24h09, 3' ... 1132 0.0 2
(BJ434546) Dictyostelium discoideum cDNA clone:ddv24n06, 3' ... 1132 0.0 2
(BJ433985) Dictyostelium discoideum cDNA clone:ddv23e17, 3' ... 1132 0.0 4
(BJ433929) Dictyostelium discoideum cDNA clone:ddv23j07, 3' ... 1132 0.0 2
(BJ433627) Dictyostelium discoideum cDNA clone:ddv22o10, 3' ... 1132 0.0 2
(BJ433593) Dictyostelium discoideum cDNA clone:ddv22i09, 3' ... 1132 0.0 3
(BJ432617) Dictyostelium discoideum cDNA clone:ddv19p04, 3' ... 1132 0.0 7
(BJ432471) Dictyostelium discoideum cDNA clone:ddv18d23, 3' ... 1132 0.0 7
(BJ432427) Dictyostelium discoideum cDNA clone:ddv18l14, 3' ... 1132 0.0 4
(BJ432387) Dictyostelium discoideum cDNA clone:ddv18e15, 3' ... 1132 0.0 4
(BJ432136) Dictyostelium discoideum cDNA clone:ddv17c21, 3' ... 1132 0.0 2
(BJ432051) Dictyostelium discoideum cDNA clone:ddv17o12, 3' ... 1132 0.0 4
(BJ431598) Dictyostelium discoideum cDNA clone:ddv14c21, 3' ... 1132 0.0 4
(BJ431196) Dictyostelium discoideum cDNA clone:ddv13o05, 3' ... 1132 0.0 6
(BJ431014) Dictyostelium discoideum cDNA clone:ddv9g17, 3' e... 1132 0.0 7
(BJ430539) Dictyostelium discoideum cDNA clone:ddv7j14, 3' e... 1132 0.0 5
(BJ430266) Dictyostelium discoideum cDNA clone:ddv6k18, 3' e... 1132 0.0 6
(BJ428192) Dictyostelium discoideum cDNA clone:ddv11f03, 3' ... 1132 0.0 2
(BJ427944) Dictyostelium discoideum cDNA clone:ddv10l04, 3' ... 1132 0.0 2
(BJ403002) Dictyostelium discoideum cDNA clone:dds18b03, 3' ... 1132 0.0 5
(BJ401971) Dictyostelium discoideum cDNA clone:dds20b04, 3' ... 1132 0.0 3
(BJ432314) Dictyostelium discoideum cDNA clone:ddv18g12, 3' ... 1130 0.0 5
(BJ435671) Dictyostelium discoideum cDNA clone:ddv27h24, 3' ... 1128 0.0 1
(BJ430758) Dictyostelium discoideum cDNA clone:ddv8j16, 3' e... 1126 0.0 4
(AU034116) Dictyostelium discoideum slug cDNA, clone SLB761. 1124 0.0 2
(BJ434528) Dictyostelium discoideum cDNA clone:ddv24k03, 3' ... 1124 0.0 5
(BJ434320) Dictyostelium discoideum cDNA clone:ddv16d14, 3' ... 1124 0.0 2
(BJ433799) Dictyostelium discoideum cDNA clone:ddv22p22, 3' ... 1124 0.0 2
(BJ433297) Dictyostelium discoideum cDNA clone:ddv21j08, 3' ... 1124 0.0 2
(BJ430485) Dictyostelium discoideum cDNA clone:ddv7m11, 3' e... 1124 0.0 7
(BJ430356) Dictyostelium discoideum cDNA clone:ddv7a02, 3' e... 1124 0.0 3
(BJ429770) Dictyostelium discoideum cDNA clone:ddv4g20, 3' e... 1124 0.0 4
(BJ429723) Dictyostelium discoideum cDNA clone:ddv4l18, 3' e... 1124 0.0 5
(BJ428646) Dictyostelium discoideum cDNA clone:ddv12p13, 3' ... 1124 0.0 2
(BJ429233) Dictyostelium discoideum cDNA clone:ddv2e19, 3' e... 1120 0.0 1
(BJ429042) Dictyostelium discoideum cDNA clone:ddv2m04, 3' e... 1120 0.0 4
(BJ432709) Dictyostelium discoideum cDNA clone:ddv19c13, 3' ... 1116 0.0 7
(BJ432206) Dictyostelium discoideum cDNA clone:ddv18c04, 3' ... 1116 0.0 6
(BJ435053) Dictyostelium discoideum cDNA clone:ddv25m19, 3' ... 1110 0.0 2
(BJ431811) Dictyostelium discoideum cDNA clone:ddv15m13, 3' ... 1104 0.0 3
(BJ431364) Dictyostelium discoideum cDNA clone:ddv13m19, 3' ... 1104 0.0 1
(BJ431858) Dictyostelium discoideum cDNA clone:ddv15g23, 3' ... 1094 0.0 2
(AU270122) Dictyostelium discoideum vegetative cDNA clone:VS... 1092 0.0 1
(AU270121) Dictyostelium discoideum vegetative cDNA clone:VS... 1092 0.0 1
(C90716) Dictyostelium discoideum slug cDNA, clone SSJ859. 1090 0.0 1
(BJ429472) Dictyostelium discoideum cDNA clone:ddv3i17, 3' e... 1076 0.0 2
(BJ428145) Dictyostelium discoideum cDNA clone:ddv10l21, 3' ... 1076 0.0 1
(BJ432975) Dictyostelium discoideum cDNA clone:ddv20l07, 3' ... 1074 0.0 4
(BJ398141) Dictyostelium discoideum cDNA clone:dds11n02, 3' ... 1063 0.0 2
(BJ377920) Dictyostelium discoideum cDNA clone:ddc26m11, 3' ... 1063 0.0 3
(BJ429338) Dictyostelium discoideum cDNA clone:ddv3l01, 3' e... 1057 0.0 2
(AU262138) Dictyostelium discoideum vegetative cDNA clone:VS... 1039 0.0 1
(BJ428728) Dictyostelium discoideum cDNA clone:ddv1d01, 3' e... 833 0.0 5
(BJ435892) Dictyostelium discoideum cDNA clone:ddv28h21, 3' ... 771 0.0 2
(BJ417823) Dictyostelium discoideum cDNA clone:ddv28n22, 5' ... 686 0.0 8
(BJ415734) Dictyostelium discoideum cDNA clone:ddv23e17, 5' ... 686 0.0 8
(BJ415684) Dictyostelium discoideum cDNA clone:ddv23j07, 5' ... 686 0.0 8
(BJ415560) Dictyostelium discoideum cDNA clone:ddv22p22, 5' ... 686 0.0 8
(BJ415399) Dictyostelium discoideum cDNA clone:ddv22o10, 5' ... 686 0.0 8
(BJ415081) Dictyostelium discoideum cDNA clone:ddv21j08, 5' ... 686 0.0 8
(BJ414253) Dictyostelium discoideum cDNA clone:ddv18e15, 5' ... 686 0.0 8
(BJ412874) Dictyostelium discoideum cDNA clone:ddv13o05, 5' ... 686 0.0 8
(BJ412710) Dictyostelium discoideum cDNA clone:ddv9g17, 5' e... 686 0.0 8
(BJ411494) Dictyostelium discoideum cDNA clone:ddv4l18, 5' e... 686 0.0 3
(BJ389770) Dictyostelium discoideum cDNA clone:dds20b04, 5' ... 686 0.0 7
(BJ417773) Dictyostelium discoideum cDNA clone:ddv28a21, 5' ... 678 0.0 8
(BJ415925) Dictyostelium discoideum cDNA clone:ddv24n06, 5' ... 678 0.0 8
(BJ412221) Dictyostelium discoideum cDNA clone:ddv7m11, 5' e... 678 0.0 8
(BJ387439) Dictyostelium discoideum cDNA clone:dds2g18, 5' e... 678 0.0 8
(BJ414454) Dictyostelium discoideum cDNA clone:ddv19p04, 5' ... 674 0.0 8
(BJ410872) Dictyostelium discoideum cDNA clone:ddv2m04, 5' e... 674 0.0 8
(C90906) Dictyostelium discoideum slug cDNA, clone SSJ291. 611 0.0 7
(BJ414017) Dictyostelium discoideum cDNA clone:ddv17c21, 5' ... 678 0.0 8
(BJ415372) Dictyostelium discoideum cDNA clone:ddv22i09, 5' ... 686 0.0 7
(BJ435867) Dictyostelium discoideum cDNA clone:ddv28a21, 3' ... 1015 0.0 1
(BJ417754) Dictyostelium discoideum cDNA clone:ddv28m17, 5' ... 686 0.0 8
(BJ427966) Dictyostelium discoideum cDNA clone:ddv10b10, 3' ... 1011 0.0 1
(BJ429930) Dictyostelium discoideum cDNA clone:ddv5n07, 3' e... 999 0.0 2
(AU270442) Dictyostelium discoideum vegetative cDNA clone:VS... 678 0.0 8
(BJ414781) Dictyostelium discoideum cDNA clone:ddv20l07, 5' ... 650 0.0 9
(BJ417722) Dictyostelium discoideum cDNA clone:ddv28g14, 5' ... 686 0.0 8
(BJ435854) Dictyostelium discoideum cDNA clone:ddv28m17, 3' ... 720 0.0 2
(BJ431856) Dictyostelium discoideum cDNA clone:ddv15f24, 3' ... 975 0.0 1
(AU265355) Dictyostelium discoideum vegetative cDNA clone:VS... 973 0.0 1
(BJ411042) Dictyostelium discoideum cDNA clone:ddv2e19, 5' e... 678 0.0 8
(AU268614) Dictyostelium discoideum vegetative cDNA clone:VS... 337 0.0 9
(BJ416941) Dictyostelium discoideum cDNA clone:ddv27h24, 5' ... 819 0.0 7
(BJ416357) Dictyostelium discoideum cDNA clone:ddv25m19, 5' ... 678 0.0 7
(BJ416597) Dictyostelium discoideum cDNA clone:ddv26m23, 5' ... 686 0.0 7
(BJ415183) Dictyostelium discoideum cDNA clone:ddv21a19, 5' ... 686 0.0 8
(BJ414084) Dictyostelium discoideum cDNA clone:ddv18c04, 5' ... 686 0.0 7
(BJ412474) Dictyostelium discoideum cDNA clone:ddv8j16, 5' e... 686 0.0 7
(BJ414182) Dictyostelium discoideum cDNA clone:ddv18g12, 5' ... 686 0.0 7
>(J03515) Slime mold (D.discoideum) severin mRNA, complete cds.
Length = 1233
Score = 1132 bits (571), Expect(8) = 0.0
Identities = 571/571 (100%)
Strand = Plus / Plus
Query: 889 tgaagtaccattggcaaccagttcattgaatagtggtgactgtttccttttggatgcagg 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tgaagtaccattggcaaccagttcattgaatagtggtgactgtttccttttggatgcagg 645
Query: 949 tttaactatttatcaattcaatggtagtaaatcaagtccacaagaaaagaataaagccgc 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tttaactatttatcaattcaatggtagtaaatcaagtccacaagaaaagaataaagccgc 705
Query: 1009 tgaagttgcacgtgcaatcgatgcagaaagaaaaggtttaccaaaagttgaagttttctg 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 tgaagttgcacgtgcaatcgatgcagaaagaaaaggtttaccaaaagttgaagttttctg 765
Query: 1069 tgaaaccgattccgatattccagctgaattttggaaacttttaggtggaaaaggtgcaat 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 tgaaaccgattccgatattccagctgaattttggaaacttttaggtggaaaaggtgcaat 825
Query: 1129 cgctgctaaacacgaaactgccccaaccaaatctgaaaaagttttatacaaattatcaga 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 cgctgctaaacacgaaactgccccaaccaaatctgaaaaagttttatacaaattatcaga 885
Query: 1189 tgcatctggttcacttaaattctctgaagtttcacgtggtaaaatcaataaatcctcatt 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 tgcatctggttcacttaaattctctgaagtttcacgtggtaaaatcaataaatcctcatt 945
Query: 1249 aaaatctgaagatgttttcatcattgatttaggtaatgaaatctatacttggatcggttc 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 aaaatctgaagatgttttcatcattgatttaggtaatgaaatctatacttggatcggttc 1005
Query: 1309 aaaatcatcaccaaatgaaaagaaaacagcattcagtcatgcaactcaatacttggtaaa 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 aaaatcatcaccaaatgaaaagaaaacagcattcagtcatgcaactcaatacttggtaaa 1065
Query: 1369 caataaacgttgtgaatatactccaatagttagagttttagaaaatggtacaaatcaatc 1428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1066 caataaacgttgtgaatatactccaatagttagagttttagaaaatggtacaaatcaatc 1125
Query: 1429 atttgaaactttattatctgcttaataataa 1459
|||||||||||||||||||||||||||||||
Sbjct: 1126 atttgaaactttattatctgcttaataataa 1156
Score = 686 bits (346), Expect(8) = 0.0
Identities = 346/346 (100%)
Strand = Plus / Plus
Query: 358 tgattaagaatagaaaattagatattacttcaactaatgttgctggtattggaacagatt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgattaagaatagaaaattagatattacttcaactaatgttgctggtattggaacagatt 122
Query: 418 tagataaaaaatgtagattggatgcagcttcaactgaagctcaatggaaaggtgttggtc 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tagataaaaaatgtagattggatgcagcttcaactgaagctcaatggaaaggtgttggtc 182
Query: 478 aagcaccaggtctcaagatttggagaattgaaaattttaaagttgtcccagttccagaat 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 aagcaccaggtctcaagatttggagaattgaaaattttaaagttgtcccagttccagaat 242
Query: 538 catcatatggtaaattctatgatggtgatagttatatcattttacatacttttaaagaag 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 catcatatggtaaattctatgatggtgatagttatatcattttacatacttttaaagaag 302
Query: 598 gtaattcacttaaacatgatattcatttctttttaggtacttttactactcaagatgaag 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gtaattcacttaaacatgatattcatttctttttaggtacttttactactcaagatgaag 362
Query: 658 ctggcactgctgcttataaaacagttgaattagatgatttcttagg 703
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ctggcactgctgcttataaaacagttgaattagatgatttcttagg 408
Score = 135 bits (68), Expect(8) = 0.0
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 703 ggtggtgcaccaattcaatatcgtcaatgtcaatcatatgaaagtccaagctttttatca 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ggtggtgcaccaattcaatatcgtcaatgtcaatcatatgaaagtccaagctttttatca 466
Query: 763 ttattccc 770
||||||||
Sbjct: 467 ttattccc 474
Score = 81.8 bits (41), Expect(8) = 0.0
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 848 gattattacatattagtggtgataagaatgctaaagtcgct 888
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gattattacatattagtggtgataagaatgctaaagtcgct 586
Score = 42.1 bits (21), Expect(8) = 0.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 773 aaaatatttcattttatcagg 793
|||||||||||||||||||||
Sbjct: 475 aaaatatttcattttatcagg 495
Score = 42.1 bits (21), Expect(8) = 0.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 793 ggtggtgttgaatcaggattt 813
|||||||||||||||||||||
Sbjct: 494 ggtggtgttgaatcaggattt 514
Score = 34.2 bits (17), Expect(8) = 0.0
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 812 tttaatcatgttaaacc 828
|||||||||||||||||
Sbjct: 512 tttaatcatgttaaacc 528
Score = 32.2 bits (16), Expect(8) = 0.0
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 832 cagaatataaaccaag 847
||||||||||||||||
Sbjct: 531 cagaatataaaccaag 546
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,540,788,282
Number of extensions: 91213622
Number of successful extensions: 7468407
Number of sequences better than 10.0: 1174
Length of query: 1546
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1522
Effective length of database: 97,308,875,965
Effective search space: 148104109218730
Effective search space used: 148104109218730
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 2 |
| Homology vs Protein |
Query= Contig-U12091-1 (Contig-U12091-1Q) /CSM_Contig/Contig-U12091-1Q.Seq.d
(1546 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70047_1(U70047|pid:none) Physarum polycephalum actin-binding pr... 148 6e-70
AJ621806_1(AJ621806|pid:none) Suberites ficus mRNA for gelsolin ... 127 3e-55
AM270354_42(AM270354|pid:none) Aspergillus niger contig An16c002... 139 5e-54
AM920435_1012(AM920435|pid:none) Penicillium chrysogenum Wiscons... 143 2e-51
AK318626_1(AK318626|pid:none) Arabidopsis thaliana AT3G57410 mRN... 104 4e-50
(O81645) RecName: Full=Villin-3; &AF081203_1(AF081203|pid:none)... 104 4e-50
AY093052_1(AY093052|pid:none) Arabidopsis thaliana unknown prote... 104 4e-50
FN313917_1(FN313917|pid:none) Schistosoma japonicum isolate Anhu... 116 4e-50
E84845(E84845)probable villin 2 [imported] - Arabidopsis thaliana 104 1e-49
AE014297_14(AE014297|pid:none) Drosophila melanogaster chromosom... 103 1e-49
(Q07171) RecName: Full=Gelsolin; Flags: Precursor; &AE014297_15... 103 1e-49
A53909(A53909;S32531) gelsolin, secreted form precursor - fruit ... 103 1e-49
AE014297_18(AE014297|pid:none) Drosophila melanogaster chromosom... 103 1e-49
AF081202_1(AF081202|pid:none) Arabidopsis thaliana villin 2 (VLN... 104 3e-49
BT055016_1(BT055016|pid:none) Zea mays full-length cDNA clone ZM... 101 9e-49
I45832(I45832) scinderin - bovine &X78479_1(X78479|pid:none) 103 2e-48
EU334660_1(EU334660|pid:none) Strongylocentrotus purpuratus vill... 115 3e-48
(Q28046) RecName: Full=Adseverin; AltName: Full=Scinderin; ... 102 3e-48
AP008209_1498(AP008209|pid:none) Oryza sativa (japonica cultivar... 105 1e-47
BC084059_1(BC084059|pid:none) Xenopus laevis gelsolin, mRNA (cDN... 99 2e-47
BC135025_1(BC135025|pid:none) Danio rerio gelsolin b, mRNA (cDNA... 93 2e-47
S51363(S51363;S49320) actin modulator protein EWAM - earthworm (... 115 2e-47
AF088901_1(AF088901|pid:none) Lilium longiflorum actin bundling ... 99 4e-47
FN357305_4(FN357305|pid:none) Schistosoma mansoni genome sequenc... 114 4e-47
AY814387_1(AY814387|pid:none) Schistosoma japonicum SJCHGC01371 ... 113 4e-47
FN317120_1(FN317120|pid:none) Schistosoma japonicum isolate Anhu... 113 4e-47
FN316954_1(FN316954|pid:none) Schistosoma japonicum isolate Anhu... 112 8e-47
AP008214_585(AP008214|pid:none) Oryza sativa (japonica cultivar-... 105 9e-46
FN357305_6(FN357305|pid:none) Schistosoma mansoni genome sequenc... 107 6e-45
T23355(T23355) hypothetical protein K06A4.3 - Caenorhabditis ele... 96 2e-43
BC135895_1(BC135895|pid:none) Xenopus tropicalis hypothetical pr... 97 2e-43
BC134994_1(BC134994|pid:none) Danio rerio gelsolin a, mRNA (cDNA... 101 7e-43
AP004657_10(AP004657|pid:none) Oryza sativa Japonica Group genom... 99 1e-42
AB071136_1(AB071136|pid:none) Echinococcus multilocularis EmAMP ... 104 3e-42
AB019233_13(AB019233|pid:none) Arabidopsis thaliana genomic DNA,... 97 4e-42
(O65570) RecName: Full=Villin-4; &AK117296_1(AK117296|pid:none)... 101 1e-41
AL078464_19(AL078464|pid:none) Arabidopsis thaliana DNA chromoso... 101 1e-41
BX572629_4(BX572629|pid:none) Zebrafish DNA sequence from clone ... 100 3e-41
BX005064_2(BX005064|pid:none) Zebrafish DNA sequence from clone ... 100 3e-41
BC074175_1(BC074175|pid:none) Xenopus laevis MGC81993 protein, m... 99 3e-41
AY893064_1(AY893064|pid:none) Synthetic construct Homo sapiens c... 104 5e-41
AK173295_1(AK173295|pid:none) Mus musculus mRNA for mKIAA1905 pr... 103 5e-41
AK299453_1(AK299453|pid:none) Homo sapiens cDNA FLJ55934 complet... 104 5e-41
AK133484_1(AK133484|pid:none) Mus musculus 11 days pregnant adul... 103 5e-41
(P06396) RecName: Full=Gelsolin; AltName: Full=Actin-depolymeriz... 104 6e-41
AK304675_1(AK304675|pid:none) Homo sapiens cDNA FLJ56212 complet... 104 6e-41
AK096280_1(AK096280|pid:none) Homo sapiens cDNA FLJ38961 fis, cl... 104 6e-41
AK151684_1(AK151684|pid:none) Mus musculus bone marrow macrophag... 102 6e-41
AK295201_1(AK295201|pid:none) Homo sapiens cDNA FLJ53327 complet... 103 8e-41
BC074679_1(BC074679|pid:none) Xenopus tropicalis villin 1, mRNA ... 83 9e-41
A32621(A32621) gelsolin, cytosolic - mouse &J04953_1(J04953|pid... 103 1e-40
AB170287_1(AB170287|pid:none) Macaca fascicularis brain cDNA clo... 102 2e-40
(Q60604) RecName: Full=Adseverin; AltName: Full=Scinderin; AltNa... 103 2e-40
Y13971_1(Y13971|pid:none) Mus musculus mRNA for adseverin(D5). 103 2e-40
BT020776_1(BT020776|pid:none) Bos taurus villin 1 (VIL1), mRNA, ... 91 3e-40
AK300631_1(AK300631|pid:none) Homo sapiens cDNA FLJ56154 complet... 102 3e-40
(Q3SX14) RecName: Full=Gelsolin; AltName: Full=Actin-depolymeriz... 102 3e-40
(Q27319) RecName: Full=Gelsolin, cytoplasmic; AltName: Full=Acti... 107 5e-40
S41391(S41391)gelsolin - American lobster 107 5e-40
BC044966_1(BC044966|pid:none) Xenopus laevis similar to villin, ... 84 6e-40
BC074148_1(BC074148|pid:none) Xenopus laevis similar to villin, ... 84 6e-40
BC049461_1(BC049461|pid:none) Danio rerio capping protein (actin... 90 6e-40
BC071365_1(BC071365|pid:none) Danio rerio capping protein (actin... 89 7e-40
AP008210_1797(AP008210|pid:none) Oryza sativa (japonica cultivar... 106 1e-39
CR855138_6(CR855138|pid:none) Oryza sativa genomic DNA, chromoso... 106 1e-39
CR859411_1(CR859411|pid:none) Pongo abelii mRNA; cDNA DKFZp469O1... 103 1e-39
(Q3SZP7) RecName: Full=Villin-1; &BC102759_1(BC102759|pid:none) 89 1e-39
(P24452) RecName: Full=Macrophage-capping protein; AltName: Full... 102 1e-39
(O75366) RecName: Full=Advillin; AltName: Full=p92; &AK314362_1... 81 2e-39
AF041449_1(AF041449|pid:none) Homo sapiens advillin mRNA, comple... 81 2e-39
AK150359_1(AK150359|pid:none) Mus musculus bone marrow macrophag... 99 3e-39
AY324394_1(AY324394|pid:none) Rattus norvegicus scinderin (Scind... 99 3e-39
BC115120_1(BC115120|pid:none) Danio rerio gelsolin a, mRNA (cDNA... 97 6e-39
AK170878_1(AK170878|pid:none) Mus musculus NOD-derived CD11c +ve... 81 1e-38
AX960828_1(AX960828|pid:none) Sequence 6 from Patent EP1371728. 97 2e-38
(Q9Y6U3) RecName: Full=Adseverin; AltName: Full=Scinderin; &AK2... 97 2e-38
AC005281_1(AC005281|pid:none) Homo sapiens PAC clone RP4-722F20 ... 97 2e-38
BC021090_1(BC021090|pid:none) Homo sapiens scinderin, mRNA (cDNA... 97 3e-38
BC168981_1(BC168981|pid:none) Rattus norvegicus villin 1, mRNA (... 89 4e-38
BC015267_1(BC015267|pid:none) Mus musculus villin 1, mRNA (cDNA ... 87 5e-38
AK152818_1(AK152818|pid:none) Mus musculus bone marrow macrophag... 96 5e-38
AK154851_1(AK154851|pid:none) Mus musculus NOD-derived CD11c +ve... 80 1e-37
AK171324_1(AK171324|pid:none) Mus musculus B6-derived CD11 +ve d... 79 1e-37
BC066531_1(BC066531|pid:none) Danio rerio scinderin like b, mRNA... 102 1e-37
AK313898_1(AK313898|pid:none) Homo sapiens cDNA, FLJ94534, highl... 94 2e-37
AK146622_1(AK146622|pid:none) Mus musculus 17 days pregnant adul... 93 3e-37
AF099929_1(AF099929|pid:none) Rattus norvegicus pervin mRNA, com... 82 4e-37
BX927121_2(BX927121|pid:none) Zebrafish DNA sequence from clone ... 100 8e-37
S15011(S15011)mbh1 protein - mouse 98 9e-37
AK165153_1(AK165153|pid:none) Mus musculus 10 days neonate olfac... 96 3e-36
(Q865V6) RecName: Full=Macrophage-capping protein; AltName: Full... 90 4e-36
BC111730_1(BC111730|pid:none) Homo sapiens advillin, mRNA (cDNA ... 80 5e-36
X54511_1(X54511|pid:none) M.musculus mbh1 gene for Myc basic mot... 98 6e-36
CP001334_86(CP001334|pid:none) Micromonas sp. RCC299 chromosome ... 87 2e-35
BC155581_1(BC155581|pid:none) Danio rerio scinderin like a, mRNA... 100 4e-34
EF042093_1(EF042093|pid:none) Lilium longiflorum actin-binding p... 99 4e-34
AF465625_1(AF465625|pid:none) Dermatophagoides farinae gelsolin-... 78 1e-33
EF103444_1(EF103444|pid:none) Haliotis discus discus gelsolin mR... 125 1e-33
BC094991_1(BC094991|pid:none) Danio rerio scinderin like a, mRNA... 97 2e-33
BC125898_1(BC125898|pid:none) Danio rerio scinderin like a, mRNA... 97 3e-33
AF175294_1(AF175294|pid:none) Danio rerio gelsolin mRNA, complet... 97 3e-33
AK304629_1(AK304629|pid:none) Homo sapiens cDNA FLJ53698 complet... 104 1e-32
AY809768_1(AY809768|pid:none) Schistosoma japonicum SJCHGC06031 ... 100 4e-32
BC045214_1(BC045214|pid:none) Xenopus laevis similar to villin 1... 83 4e-32
AL513122_6(AL513122|pid:none) Human DNA sequence from clone RP11... 89 6e-32
DQ453500_1(DQ453500|pid:none) Heliocidaris tuberculata advillin ... 80 7e-32
EU714148_1(EU714148|pid:none) Epinephelus coioides gelsolin a mR... 103 2e-30
(O81643) RecName: Full=Villin-1; &AC007113_2(AC007113|pid:none) 79 4e-30
H84701(H84701)probable villin [imported] - Arabidopsis thaliana 79 4e-30
AK318641_1(AK318641|pid:none) Arabidopsis thaliana AT2G29890 mRN... 79 5e-30
AL773523_9(AL773523|pid:none) Mouse DNA sequence from clone RP23... 89 7e-30
A31142(A31142;B31142)gelsolin, ovarian - African clawed frog (fr... 80 1e-29
(P14885) RecName: Full=Gelsolin; AltName: Full=Actin-depolymeriz... 80 1e-29
AL928875_3(AL928875|pid:none) Zebrafish DNA sequence from clone ... 86 1e-27
BC085829_1(BC085829|pid:none) Rattus norvegicus flightless I hom... 72 2e-27
CR861279_1(CR861279|pid:none) Pongo abelii mRNA; cDNA DKFZp459O0... 75 2e-27
AB174009_1(AB174009|pid:none) Macaca fascicularis brain cDNA clo... 72 5e-27
BC090138_1(BC090138|pid:none) Xenopus tropicalis flightless 1 ho... 68 9e-27
AF287264_1(AF287264|pid:none) Mus musculus cytoskeletal actin-mo... 72 1e-26
(Q9JJ28) RecName: Full=Protein flightless-1 homolog; &AF142329_... 72 1e-26
A49674(A49674) flightless-I homolog - human (fragment) &U01184_... 72 1e-26
(Q13045) RecName: Full=Protein flightless-1 homolog; &BC025300_... 72 1e-26
AK295814_1(AK295814|pid:none) Homo sapiens cDNA FLJ50778 complet... 72 1e-26
AK295655_1(AK295655|pid:none) Homo sapiens cDNA FLJ50164 complet... 72 1e-26
(P09327) RecName: Full=Villin-1; 88 1e-26
A07400_1(A07400|pid:none) H.sapiens DNA for villin. &A31642(A31... 88 1e-26
AK313709_1(AK313709|pid:none) Homo sapiens cDNA, FLJ94302, highl... 88 1e-26
AK300965_1(AK300965|pid:none) Homo sapiens cDNA FLJ57609 complet... 76 1e-26
AJ720675_1(AJ720675|pid:none) Gallus gallus mRNA for hypothetica... 91 2e-26
BC054960_1(BC054960|pid:none) Xenopus laevis villin 1, mRNA (cDN... 94 4e-26
AJ719674_1(AJ719674|pid:none) Gallus gallus mRNA for hypothetica... 72 9e-26
AL513122_7(AL513122|pid:none) Human DNA sequence from clone RP11... 68 6e-25
DQ465376_1(DQ465376|pid:none) Oreochromis mossambicus clone SSH ... 68 6e-25
AY227447_1(AY227447|pid:none) Anableps anableps gelsolin mRNA, c... 74 7e-25
BC074479_1(BC074479|pid:none) Xenopus laevis MGC84783 protein, m... 67 9e-25
AK341307_1(AK341307|pid:none) Acyrthosiphon pisum ACYPI008158 mR... 86 1e-24
(Q24020) RecName: Full=Protein flightless-1; AltName: Full=Fligh... 67 6e-24
EU677720_1(EU677720|pid:none) Caenorhabditis brenneri gelsolin m... 76 2e-23
(Q91YD6) RecName: Full=Villin-like protein; AltName: Full=EF-6; ... 73 2e-22
DQ119347_1(DQ119347|pid:none) Medicago sativa villin 3 mRNA, par... 67 4e-22
(O15195) RecName: Full=Villin-like protein; 73 1e-21
AB208864_1(AB208864|pid:none) Homo sapiens mRNA for flightless I... 72 1e-21
BC017303_1(BC017303|pid:none) Homo sapiens villin 1, mRNA (cDNA ... 88 1e-21
BC021808_1(BC021808|pid:none) Mus musculus villin-like, mRNA (cD... 69 2e-21
NRL(1VIL) Villin (domain one comprising residues 1 126) (also ca... 92 3e-21
AK136080_1(AK136080|pid:none) Mus musculus in vitro fertilized e... 103 2e-20
EU155485_1(EU155485|pid:none) Lumbricus terrestris gelsolin-rela... 86 4e-20
BT075471_1(BT075471|pid:none) Osmerus mordax clone omor-eva-511-... 92 2e-19
AY119662_1(AY119662|pid:none) Drosophila melanogaster SD07495 fu... 96 3e-18
AY080906_1(AY080906|pid:none) Brugia malayi gelsolin mRNA, parti... 54 3e-18
U12026_1(U12026|pid:none) Human actin-regulatory protein Cap-G (... 65 8e-18
EF215146_1(EF215146|pid:none) Callithrix jacchus clone J23-44.2_... 94 1e-17
(P36418) RecName: Full=Protovillin; AltName: Full=100 kDa actin-... 90 2e-16
AM474513_1(AM474513|pid:none) Vitis vinifera contig VV78X109071.... 85 2e-16
AJ577853_1(AJ577853|pid:none) Nicotiana tabacum partial mRNA for... 80 1e-14
FN357601_4(FN357601|pid:none) Schistosoma mansoni genome sequenc... 59 2e-14
BC000243_1(BC000243|pid:none) Homo sapiens villin-like, mRNA (cD... 64 4e-14
JC5708(JC5708)villin-like protein - human 64 4e-14
BC004300_1(BC004300|pid:none) Homo sapiens villin-like, mRNA (cD... 64 4e-14
BC017491_1(BC017491|pid:none) Homo sapiens, Similar to gelsolin ... 72 4e-14
AB169208_1(AB169208|pid:none) Macaca fascicularis testis cDNA, c... 72 6e-14
DQ453501_1(DQ453501|pid:none) Heliocidaris erythrogramma advilli... 82 7e-14
DQ453502_1(DQ453502|pid:none) Strongylocentrotus purpuratus advi... 81 9e-14
AJ427856_1(AJ427856|pid:none) Dictyostelium discoideum ORF encod... 81 1e-13
(Q8WQ85) RecName: Full=Villidin; 81 1e-13
A88536(A88536)protein B0523.5 [imported] - Caenorhabditis elegans 78 8e-13
S44732(S44732)b0523.5 protein - Caenorhabditis elegans 78 8e-13
AY261827_1(AY261827|pid:none) Ciona intestinalis cytoplasmic gel... 77 1e-12
AF317423_1(AF317423|pid:none) Mus musculus archvillin (Svil) mRN... 74 1e-11
(Q8K4L3) RecName: Full=Supervillin; AltName: Full=Archvillin; Al... 74 1e-11
BC032282_1(BC032282|pid:none) Mus musculus flightless I homolog ... 63 3e-11
BT072437_1(BT072437|pid:none) Salmo salar clone ssal-rgf-525-250... 72 7e-11
EF042092_1(EF042092|pid:none) Lilium longiflorum actin-binding p... 55 8e-11
AY812444_1(AY812444|pid:none) Schistosoma japonicum SJCHGC04227 ... 71 9e-11
FN392234_1(FN392234|pid:none) Psetta maxima partial mRNA for gel... 71 1e-10
AY825266_1(AY825266|pid:none) Meleagris gallopavo villin (VIL1) ... 71 1e-10
BC022664_1(BC022664|pid:none) Mus musculus villin-like, mRNA (cD... 53 1e-10
AL513122_9(AL513122|pid:none) Human DNA sequence from clone RP11... 70 2e-10
AY380816_1(AY380816|pid:none) Mustela putorius furo smooth muscl... 69 4e-10
AK118185_1(AK118185|pid:none) Arabidopsis thaliana At2g29890 mRN... 69 4e-10
AL117410_1(AL117410|pid:none) Homo sapiens mRNA; cDNA DKFZp586H1... 68 1e-09
BC129018_1(BC129018|pid:none) Xenopus tropicalis supervillin, mR... 68 1e-09
AF051850_1(AF051850|pid:none) Homo sapiens supervillin mRNA, com... 68 1e-09
AL158167_3(AL158167|pid:none) Human DNA sequence from clone RP11... 68 1e-09
AK304720_1(AK304720|pid:none) Homo sapiens cDNA FLJ53284 complet... 68 1e-09
AK304799_1(AK304799|pid:none) Homo sapiens cDNA FLJ53285 complet... 68 1e-09
AL158167_2(AL158167|pid:none) Human DNA sequence from clone RP11... 68 1e-09
AK302077_1(AK302077|pid:none) Homo sapiens cDNA FLJ60365 complet... 68 1e-09
BC075797_1(BC075797|pid:none) Homo sapiens cDNA clone MGC:87550 ... 67 1e-09
AK027778_1(AK027778|pid:none) Homo sapiens cDNA FLJ14872 fis, cl... 67 1e-09
FN375063_1(FN375063|pid:none) Schistosoma mansoni genome sequenc... 67 2e-09
X07066_1(X07066|pid:none) Human gene for gelsolin exon 4. 66 3e-09
A54832(A54832) villin homolog quail - fruit fly (Drosophila mela... 46 4e-09
AY052174_1(AY052174|pid:none) Drosophila simulans isolate sim1 g... 65 5e-09
AY052178_1(AY052178|pid:none) Drosophila simulans isolate sim5 g... 65 5e-09
AY052175_1(AY052175|pid:none) Drosophila simulans isolate sim2 g... 65 5e-09
AY052176_1(AY052176|pid:none) Drosophila simulans isolate sim3 g... 65 5e-09
DQ227765_1(DQ227765|pid:none) Danio rerio supervillin (svil) mRN... 60 3e-07
BC155721_1(BC155721|pid:none) Danio rerio supervillin, mRNA (cDN... 60 3e-07
AY052173_1(AY052173|pid:none) Drosophila yakuba gelsolin (Gel) g... 60 3e-07
AL137080_26(AL137080|pid:none) Arabidopsis thaliana DNA chromoso... 52 8e-05
EU968726_1(EU968726|pid:none) Zea mays clone 323720 unknown mRNA. 50 2e-04
AE014296_486(AE014296|pid:none) Drosophila melanogaster chromoso... 49 4e-04
AE014296_485(AE014296|pid:none) Drosophila melanogaster chromoso... 49 4e-04
BT031169_1(BT031169|pid:none) Drosophila melanogaster SD07506 fu... 49 4e-04
AY058783_1(AY058783|pid:none) Drosophila melanogaster SD07766 fu... 49 4e-04
AL513122_8(AL513122|pid:none) Human DNA sequence from clone RP11... 49 7e-04
T30330(T30330) gelsolin-related protein GRP125 - slime mold (Dic... 49 7e-04
AY686211_1(AY686211|pid:none) Culicoides sonorensis gelsolin gen... 49 7e-04
DQ178178_1(DQ178178|pid:none) Cercopithecus aethiops supervillin... 48 0.001
AK161114_1(AK161114|pid:none) Mus musculus 10 days neonate skin ... 48 0.001
BT071994_1(BT071994|pid:none) Salmo salar clone ssal-rgf-506-358... 47 0.002
FJ438495_1(FJ438495|pid:none) Epinephelus coioides scinderin-lik... 47 0.002
U88311_9(U88311|pid:none) Caenorhabditis elegans cosmid C10H11, ... 45 0.009
FN357417_16(FN357417|pid:none) Schistosoma mansoni genome sequen... 45 0.009
BC055667_1(BC055667|pid:none) Danio rerio supervillin, mRNA (cDN... 44 0.016
AC114263_37(AC114263|pid:none) Dictyostelium discoideum chromoso... 44 0.016
EU714149_1(EU714149|pid:none) Epinephelus coioides gelson mRNA, ... 44 0.021
BC004055_1(BC004055|pid:none) Mus musculus supervillin, mRNA (cD... 42 0.047
AF118397_1(AF118397|pid:none) Entamoeba histolytica actin-bindin... 41 0.10
AY533218_1(AY533218|pid:none) Chinchilla lanigera plasma gelsoli... 40 0.18
AL832070_1(AL832070|pid:none) Homo sapiens mRNA; cDNA DKFZp313L0... 40 0.18
AX888230_1(AX888230|pid:none) Sequence 4093 from Patent EP1033401. 40 0.30
FJ556692_1(FJ556692|pid:none) Uncultured bacterium clone MaRi_27... 37 1.5
CP000918_1268(CP000918|pid:none) Streptococcus pneumoniae 70585,... 35 5.7
AM180355_2870(AM180355|pid:none) Clostridium difficile 630 compl... 35 5.7
CP000919_1339(CP000919|pid:none) Streptococcus pneumoniae JJA, c... 35 9.7
CP000919_985(CP000919|pid:none) Streptococcus pneumoniae JJA, co... 35 9.7
(O52960) RecName: Full=Chaperone protein dnaK; AltName: Full=Hea... 35 9.7
>U70047_1(U70047|pid:none) Physarum polycephalum actin-binding protein
fragmin P mRNA, complete cds.
Length = 371
Score = 148 bits (374), Expect(2) = 6e-70
Identities = 89/215 (41%), Positives = 129/215 (60%), Gaps = 7/215 (3%)
Frame = +2
Query: 812 FNHVKPTRI*TKDYYILVVIRMLKSLEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSPQ 991
F+HV+ + T+ + L + ++ EVP SLNSGD F+LDAG T+ Q+NG+K+
Sbjct: 156 FHHVEADKYRTRLLH-LKGKKHIRVHEVPKTYKSLNSGDVFVLDAGKTVIQWNGAKAGLL 214
Query: 992 EKNKAAEVARAIDAERKGLPKVEVFCETDSDIPAEFWKLLGGKGAIA------AKHETAP 1153
EK KAAE+ +AI+ ER+G+ V E D+D EF+ LLG KG IA + E
Sbjct: 215 EKVKAAELLQAIEGEREGIASGRVVAEADND--TEFFTLLGDKGPIADAAAGGSDLEADK 272
Query: 1154 TKSEKVLYKLSDASGSLKFSEVSRG-KINKSSLKSEDVFIIDLGNEIYTWIGSKSSPNEK 1330
VL +LSDASG +F+EV+RG K+ ++ L S DVF++ G E++ W+G +S EK
Sbjct: 273 KDQPAVLLRLSDASGKFEFTEVARGLKVKRNLLDSNDVFVLYTGAEVFAWVGKHASVGEK 332
Query: 1331 KTAFSHATQYLVNNKRCEYTPIVRVLENGTNQSFE 1435
K A S A +Y+ +TP+ R+LE G N+ FE
Sbjct: 333 KKALSFAQEYVQKAGLPIHTPVARILEGGENEVFE 367
Score = 141 bits (355), Expect(2) = 6e-70
Identities = 64/115 (55%), Positives = 88/115 (76%), Gaps = 3/115 (2%)
Frame = +3
Query: 369 RKLDITSTNVAGIGTDLDKKCRLDAASTEAQWKGVGQAPGLKIWRIENFKVVPVPESSYG 548
++ +I +N+A +GT+L+KK +L+A+ E WKG G+ G++IWRI+ FKVVPVP+ +G
Sbjct: 5 KEYNIADSNIANLGTELEKKVKLEASQHEDAWKGAGKQVGVEIWRIQQFKVVPVPKKHHG 64
Query: 549 KFYDGDSYIILHTF---KEGNSLKHDIHFFLGTFTTQDEAGTAAYKTVELDDFLG 704
FY GDSYI+L T+ + L +D+HF+LG FTTQDEAGTAAYKTVELDD+LG
Sbjct: 65 SFYTGDSYIVLSTYHPKTNPDKLAYDVHFWLGAFTTQDEAGTAAYKTVELDDYLG 119
Score = 52.8 bits (125), Expect = 3e-05
Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +1
Query: 703 GGAPIQYRQCQSYESPSFLSLFPK-NISFYQGGVESGF*SC*THQNINQGLLHISGDKNA 879
GG P+QYR+ Q YES FLSLFPK + GGVE+GF LLH+ G K+
Sbjct: 119 GGLPVQYREVQGYESERFLSLFPKGGLRILDGGVETGFHHV-EADKYRTRLLHLKGKKHI 177
Query: 880 KV 885
+V
Sbjct: 178 RV 179
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,236,515,252
Number of extensions: 43664938
Number of successful extensions: 107816
Number of sequences better than 10.0: 229
Number of HSP's gapped: 106453
Number of HSP's successfully gapped: 821
Length of query: 515
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 382
Effective length of database: 620,718,517
Effective search space: 237114473494
Effective search space used: 237114473494
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
5 |
| VH (FL, L) |
0 |
| VF (FL, S) |
68 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
5 |
| SS (DIR, S) |
3 |
| SH (FL, L) |
1 |
| SF (FL, S) |
5 |
| CH (FL, L) |
3 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |