Contig-U12088-1
Contig ID Contig-U12088-1
Contig update 2002.12.18
Contig sequence
>Contig-U12088-1 (Contig-U12088-1Q) /CSM_Contig/Contig-U12088-1Q.Seq.d
ATATGCCAGTTGTTGTAACTGTATTAAATAGTTATTCAGGTTGGGCATTG
GTTGCTGAAGGTTTCATGTTAGATTCATCCCTATTGAATATTGTTGGTGC
AATTGTTGGTTCAAGTGGTGCAATCTTATCATATATCATGTGTAAAGCTA
TGAATAGAAATCTTATGAGTGTTATTTTAGGTGGTGTTGGTACATCAAGT
ATGGGAAAAGGTGAAGCAATGAAAATCACAGGTACTCACACTGAAATCAA
TGTTGATCAAGCAAGTGAAATGATTACCAACTCTAAAAATATTCTCATTG
TACCAGGTTATGGTATGGTTGTTAGTAAAAGTCAATATCCAGTTGCAGAG
ATGGTTAAAACTTTAATTGAAAAAGGTCACAATGTTAAATTTGGTATTCA
TCCAGTAGCAGGTAGATTACCAGGTCACTTGAATATTTGCTTAAGTGAAG
CAAAGGTTCCATATGACATTGTTTTCGAAATGGAAGAAATTAATCCAGAA
ATGAAAGATATAGATTTAGCAATCGTAATTGGTGCAAATGATACCGTCAA
TAGTGCATCAGTTGAAGATCCAAATTCAATTATCGCTGGTATGCCAGTTA
TTGAAGTTTGGAAAGCAAAACATTGTATCGTTATGAAACGTTCATTAACA
AATGCTGGTTATGCCGATATTCAAAATCCAGTATTTTATAAACCAAATAC
TTCAATGTTATTAGGTGATGCTACAAACACTTGTAAAGAATTGGCAAATA
AAATTGATAAACATTATAATTCATCTCATTAAAATAAAAAATTAAATTAA
ATTAAATAAATAAATAAAATAAATAAATAAATATATAAATAAATAAATAA
ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAATACAATGATC
ATGTTAAAAATAAATATATATTTTAAAGAAAGAAAATAAAAAATAATAAA
AAATAATAATAGGAAAAAAAAAAAATAATAATAATAAACTTTAAACA---
-------TTTCACCAAATCAAATCGGAACAATTTTAAAAACAAAATCATC
ATCATCATCATCATTATTAAATAATATTAGATATTCAACATTGAATAATT
CCAATAAATTAATCCACCCAATTTCAACATCCACAAGATTTAATTGTAAT
TTCAATGAATCAAATAAGAATGTTTTAAATAAAAACAACTTTGAACCTTC
AAATAAAGTTATTTCAATTAAAAGAAATGTAACAAATAGATTATTTTATA
GTACATTAAAAGATCAAACTGGAAGTGTATTACCAACAACACCGAATCAA
GGAATAACATCAATTGATATGGCATTAGAATTAACAAAAGATGCAAAAGG
TATTCCATTTGAACAATTAACTATTGGTATCCCAACTGAAGTTTATCAAA
ATGAAAAGAGAGTATCAATGACACCTGAAAATGTTGGAGTTTTGGTGAAA
AAAGGTTACAAAGTGTTAGTTGAAGAAGGAGCTGGTAAAGGTGCAAAATT
CTCTGATGCTAAATATATTGAAGCCGGTGCAAAAATTACAACTGCAGCTA
ATTTATTCAAGAAAACCGATATATTACTAAAGGTTAGAGGTCCACAATTT
AATACAAACTTGGGTAAACATGAAGTTGAAATGATGAAAGAAGGTGCTAC
AGTAATTAGCTTTTTATCACCAGCACAAAATGCAGAAACTTTAAAGTTAC
TATCACAAAAGAAAGCTAATGCCATTGCAGTTGATTGTATACCAAGAATT
AGTAGAGCACAGGTTTTTGATGGTTTATCATCAATGGCAAATATTGCAGG
TTATAAAGCAGTGATGGAGGCATCCAACTATTTTGGTAGATTCTTTGGTG
GAGCCATTACAGCCGCTGGTAGAGTTCAGCCTGCTAAAGTATTGGTTATT
GGTGCTGGTGTTGCTGGTTTATCTGCTATTGGTACCGCTAAAAATATTGG
TGCTATCGTTAGAGCATTCGATACTAGATCTGTTACCAAAGAACAAGTTG
AATCATTGGGTGGTGAATTTTTAGAAGTGAAAATCAAAGAGAGTGGAGAA
GGTTCAGGTGGCTATGCAAAACACATGTCAAAGGAATACATTGAGGCTGA
AATGGCATTGTTTGAACGTCAATGTAAAGAAGTGGATATCGTAATTACAA
CCGCTTTAATTCCAGGTGTACCTGCCCCAAAATTAATTACCAAACAAATG
GTTGATCAAATGAAACCAGGTAGTGTTATTGTAGATTTAGCTGCTGAAAC
TGGTGGTAATTGTGAATTAACAAAACCAGGCGAAGCTTATAATTATAATG
GTGTTTCAATTATTGGTTTCACTGATTTACCATCAAAAATGGCAACTCAA
TCAAGTACACTCTATAGTAATAATATCGCCAAGTTTCTCTTATCTTTAGG
TAATGATAAAGATGGTTTCAAATTAGATTTCACTGATGAAGTTCATAGAG
GTTCAACAGTAACTTATAATGGTACTTTAATTTGGCCAGCCCCAAAGAAA
CCAGTTCCAGTGACTCCACCATCACCATCAACACCTGTTAGTAATAAAGA
AAAGGTTGAGAGTAATCTTGTTAAAGAAGAAACTTCATTATTTAATAAAA
CATTGAAATCAGCATTGGGTGCAACAGCAGCAATGTGTGGTGCAGTTGCA
ATGTCAATGGGATTA

Gap gap included
Contig length 2655
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 1853640
End point 1851714
Strand (PLUS/MINUS) MINUS
Number of clones 20
Number of EST 32
Link to clone list U12088
List of clone(s)

est1=VHQ158Z,1,771
est2=VHK881Z,23,593
est3=VHC286Z,41,552
est4=VHF148Z,49,798
est5=VHM348Z,141,771
est6=VHD637Z,160,854
est7=VHN216Z,162,824
est8=VHB345Z,164,883
est9=VHO842Z,166,706
est10=VHC381Z,190,908
est11=VHD608Z,224,924
est12=VHG795Z,227,770
est13=VHJ137Z,243,938
est14=SHG631F,275,950
est15=VHP127Z,288,788
est16=VHH633Z,359,1001
est17=VHE583Z,467,886
est18=VHF710Z,603,893
est19=VHG795F,1002,1577
est20=VHJ137F,1081,1653
est21=VHL572F,1142,1740
est22=SHG631Z,1181,1955
est23=VHH633F,1408,2033
est24=VHM348F,1499,2034
est25=VHD637F,1509,2041
est26=VHB345F,1525,2140
est27=VHP154F,1531,2137
est28=VHE583F,1648,2213
est29=VHC381F,1684,2210
est30=VHQ158F,1837,2439
est31=VHF148F,2094,2659
est32=VHD608F,2138,2659
Translated Amino Acid sequence
mpvvvtvlnsysgwalvaegfmldssllnivgaivgssgailsyimckamnrnlmsvilg
gvgtssmgkgeamkitgthteinvdqasemitnsknilivpgygmvvsksqypvaemvkt
liekghnvkfgihpvagrlpghlniclseakvpydivfemeeinpemkdidlaivigand
tvnsasvedpnsiiagmpvievwkakhcivmkrsltnagyadiqnpvfykpntsmllgda
tntckelankidkhynssh*nkkln*ik*inkink*iyk*ink*ink*ink*ink*yndh
vknkyif*rkkiknnkk***EKKKIIIINFK---

---SPNQIGTILKTKSSSSSSLLNNIRYSTLNNSNKLIHPISTSTRFNCNFNESNKNVLN
KNNFEPSNKVISIKRNVTNRLFYSTLKDQTGSVLPTTPNQGITSIDMALELTKDAKGIPF
EQLTIGIPTEVYQNEKRVSMTPENVGVLVKKGYKVLVEEGAGKGAKFSDAKYIEAGAKIT
TAANLFKKTDILLKVRGPQFNTNLGKHEVEMMKEGATVISFLSPAQNAETLKLLSQKKAN
AIAVDCIPRISRAQVFDGLSSMANIAGYKAVMEASNYFGRFFGGAITAAGRVQPAKVLVI
GAGVAGLSAIGTAKNIGAIVRAFDTRSVTKEQVESLGGEFLEVKIKESGEGSGGYAKHMS
KEYIEAEMALFERQCKEVDIVITTALIPGVPAPKLITKQMVDQMKPGSVIVDLAAETGGN
CELTKPGEAYNYNGVSIIGFTDLPSKMATQSSTLYSNNIAKFLLSLGNDKDGFKLDFTDE
VHRGSTVTYNGTLIWPAPKKPVPVTPPSPSTPVSNKEKVESNLVKEETSLFNKTLKSALG
ATAAMCGAVAMSMGL


Translated Amino Acid sequence (All Frames)
Frame A:
icqll*ly*iviqvghwllkvsc*ihpy*illvqllvqvvqsyhiscvkl*ieil*vlf*
vvlvhqvwekvkq*ksqvltlksmlikqvk*lptlkifslyqvmvwllvkvniqlqrwlk
l*lkkvtmlnlvfiq*qvdyqvt*ifa*vkqrfhmtlfskwkkliqk*ki*i*qs*lvqm
ipsivhqlkiqiqlslvcqllkfgkqnivsl*nvh*qmlvmpifkiqyfinqilqcy*vm
lqtlvknwqikliniiihlikikn*iklnk*ik*inkyink*ink*ink*ink*inntmi
mlkiniyfkerk*kiiknnnrkkkk****tln---

---fhqikseqf*kqnhhhhhhy*iildiqh*iipin*stqfqhpqdlivismnqirmf*
ikttlnlqiklfqlkem*qidyfivh*kiklevyyqqhrike*hqliwh*n*qkmqkvfh
lnn*llvsqlkfikmkreyq*hlkmlefw*kkvtkc*lkkelvkvqnslmlnilkpvqkl
qlqliysrkpiyy*rlevhnliqtwvnmklk**kkvlq*lafyhqhkmqkl*syyhkrkl
mplqlivyqelvehrflmvyhqwqilqvikq*wrhptilvdslveplqplvefsllkywl
lvlvllvylllvplkilvlslehsildllpknklnhwvvnf*k*kskrvekvqvamqntc
qrntlrlkwhclnvnvkkwis*lqpl*fqvylpqn*lpnkwlik*nqvvll*i*llklvv
ivn*qnqakliiimvfqllvsliyhqkwqlnqvhsiviispsfsyl*vmikmvsn*islm
kfievqq*limvl*fgqpqrnqfq*lhhhhqhllvikkrlrvillkkklhylikh*nqhw
vqqqqcvvqlqcqwd

Frame B:
yasccncik*lfrlgigc*rfhvrfipieycwcncwfkwcnliiyhv*sye*ksyecyfr
wcwyikygkr*snenhrysh*nqc*ssk*ndyql*kyshctrlwygc**ksisscrdg*n
fn*krsqc*iwyssssr*itrsleyllk*skgsi*hcfrngrn*srneryrfsnrnwck*
yrq*cis*rskfnyrwyasy*slesktlyryetfinkcwlcryskssil*tkyfnvir*c
ykhl*rigk*n**tl*fislk*kikln*ink*nk*ini*ink*ink*ink*ink*iiq*s
c*k*iyilkkenkk**kiiigkkknnnnkl*t---

---ftksnrnnfknkiiiiiiiik*y*ifnie*fq*inppnfnihki*l*fq*ik*ecfk
*kql*tfk*syfn*kkcnk*iil*yikrsnwkcitnntesrnnin*ygirinkrckrysi
*tinywypn*slsk*kesindt*kcwsfgekrlqsvs*rrsw*rckil*c*iy*srckny
ncs*fiqenryitkg*rsti*yklg*t*s*nderrcysn*lfitstkcrnfkvtitkes*
chcs*lytkn**stgf*wfiingkycrl*ssdggiqlfw*ilwwshysrw*ssac*sigy
wcwccwficywyr*kywcyr*siry*icyqrts*iigw*ifrsenqrewrrfrwlckthv
kgih*g*ngiv*tsm*rsgyrnynrfnsrctcpkinyqtng*snetr*cycrfsc*nww*
l*inktrrsl*l*wcfnywfh*ftikngnsikytl***yrqvslifr***rwfqirfh**
ss*rfnsnl*wyfnlaspketsssdstitintc***rkg*e*sc*rrnfii**nieisig
cnssnvwcscnvngi

Frame C:
mpvvvtvlnsysgwalvaegfmldssllnivgaivgssgailsyimckamnrnlmsvilg
gvgtssmgkgeamkitgthteinvdqasemitnsknilivpgygmvvsksqypvaemvkt
liekghnvkfgihpvagrlpghlniclseakvpydivfemeeinpemkdidlaivigand
tvnsasvedpnsiiagmpvievwkakhcivmkrsltnagyadiqnpvfykpntsmllgda
tntckelankidkhynssh*nkkln*ik*inkink*iyk*ink*ink*ink*ink*yndh
vknkyif*rkkiknnkk***EKKKIIIINFK---

---SPNQIGTILKTKSSSSSSLLNNIRYSTLNNSNKLIHPISTSTRFNCNFNESNKNVLN
KNNFEPSNKVISIKRNVTNRLFYSTLKDQTGSVLPTTPNQGITSIDMALELTKDAKGIPF
EQLTIGIPTEVYQNEKRVSMTPENVGVLVKKGYKVLVEEGAGKGAKFSDAKYIEAGAKIT
TAANLFKKTDILLKVRGPQFNTNLGKHEVEMMKEGATVISFLSPAQNAETLKLLSQKKAN
AIAVDCIPRISRAQVFDGLSSMANIAGYKAVMEASNYFGRFFGGAITAAGRVQPAKVLVI
GAGVAGLSAIGTAKNIGAIVRAFDTRSVTKEQVESLGGEFLEVKIKESGEGSGGYAKHMS
KEYIEAEMALFERQCKEVDIVITTALIPGVPAPKLITKQMVDQMKPGSVIVDLAAETGGN
CELTKPGEAYNYNGVSIIGFTDLPSKMATQSSTLYSNNIAKFLLSLGNDKDGFKLDFTDE
VHRGSTVTYNGTLIWPAPKKPVPVTPPSPSTPVSNKEKVESNLVKEETSLFNKTLKSALG
ATAAMCGAVAMSMGL

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U12088-1 (Contig-U12088-1Q)
/CSM_Contig/Contig-U12088-1Q.Seq.d
(2665 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U12088-1 (Contig-U12088-1Q) /CSM_Contig/Conti... 3174 0.0
Contig-U13789-1 (Contig-U13789-1Q) /CSM_Contig/Conti... 728 0.0
Contig-U14711-1 (Contig-U14711-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U14309-1 (Contig-U14309-1Q) /CSM_Contig/Conti... 38 0.048
Contig-U13914-1 (Contig-U13914-1Q) /CSM_Contig/Conti... 38 0.048
Contig-U13457-1 (Contig-U13457-1Q) /CSM_Contig/Conti... 38 0.048
Contig-U12231-1 (Contig-U12231-1Q) /CSM_Contig/Conti... 38 0.048
Contig-U13582-1 (Contig-U13582-1Q) /CSM_Contig/Conti... 36 0.19
Contig-U12828-1 (Contig-U12828-1Q) /CSM_Contig/Conti... 36 0.19
Contig-U12098-1 (Contig-U12098-1Q) /CSM_Contig/Conti... 36 0.19

>Contig-U12088-1 (Contig-U12088-1Q) /CSM_Contig/Contig-U12088-1Q.Seq.d
Length = 2665

Score = 3174 bits (1601), Expect = 0.0
Identities = 1601/1601 (100%)
Strand = Plus / Plus


Query: 1065 tattaaataatattagatattcaacattgaataattccaataaattaatccacccaattt 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1065 tattaaataatattagatattcaacattgaataattccaataaattaatccacccaattt 1124


Query: 1125 caacatccacaagatttaattgtaatttcaatgaatcaaataagaatgttttaaataaaa 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1125 caacatccacaagatttaattgtaatttcaatgaatcaaataagaatgttttaaataaaa 1184


Query: 1185 acaactttgaaccttcaaataaagttatttcaattaaaagaaatgtaacaaatagattat 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1185 acaactttgaaccttcaaataaagttatttcaattaaaagaaatgtaacaaatagattat 1244


Query: 1245 tttatagtacattaaaagatcaaactggaagtgtattaccaacaacaccgaatcaaggaa 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1245 tttatagtacattaaaagatcaaactggaagtgtattaccaacaacaccgaatcaaggaa 1304


Query: 1305 taacatcaattgatatggcattagaattaacaaaagatgcaaaaggtattccatttgaac 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1305 taacatcaattgatatggcattagaattaacaaaagatgcaaaaggtattccatttgaac 1364


Query: 1365 aattaactattggtatcccaactgaagtttatcaaaatgaaaagagagtatcaatgacac 1424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1365 aattaactattggtatcccaactgaagtttatcaaaatgaaaagagagtatcaatgacac 1424


Query: 1425 ctgaaaatgttggagttttggtgaaaaaaggttacaaagtgttagttgaagaaggagctg 1484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1425 ctgaaaatgttggagttttggtgaaaaaaggttacaaagtgttagttgaagaaggagctg 1484


Query: 1485 gtaaaggtgcaaaattctctgatgctaaatatattgaagccggtgcaaaaattacaactg 1544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1485 gtaaaggtgcaaaattctctgatgctaaatatattgaagccggtgcaaaaattacaactg 1544


Query: 1545 cagctaatttattcaagaaaaccgatatattactaaaggttagaggtccacaatttaata 1604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1545 cagctaatttattcaagaaaaccgatatattactaaaggttagaggtccacaatttaata 1604


Query: 1605 caaacttgggtaaacatgaagttgaaatgatgaaagaaggtgctacagtaattagctttt 1664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1605 caaacttgggtaaacatgaagttgaaatgatgaaagaaggtgctacagtaattagctttt 1664


Query: 1665 tatcaccagcacaaaatgcagaaactttaaagttactatcacaaaagaaagctaatgcca 1724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1665 tatcaccagcacaaaatgcagaaactttaaagttactatcacaaaagaaagctaatgcca 1724


Query: 1725 ttgcagttgattgtataccaagaattagtagagcacaggtttttgatggtttatcatcaa 1784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1725 ttgcagttgattgtataccaagaattagtagagcacaggtttttgatggtttatcatcaa 1784


Query: 1785 tggcaaatattgcaggttataaagcagtgatggaggcatccaactattttggtagattct 1844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1785 tggcaaatattgcaggttataaagcagtgatggaggcatccaactattttggtagattct 1844


Query: 1845 ttggtggagccattacagccgctggtagagttcagcctgctaaagtattggttattggtg 1904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1845 ttggtggagccattacagccgctggtagagttcagcctgctaaagtattggttattggtg 1904


Query: 1905 ctggtgttgctggtttatctgctattggtaccgctaaaaatattggtgctatcgttagag 1964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1905 ctggtgttgctggtttatctgctattggtaccgctaaaaatattggtgctatcgttagag 1964


Query: 1965 cattcgatactagatctgttaccaaagaacaagttgaatcattgggtggtgaatttttag 2024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1965 cattcgatactagatctgttaccaaagaacaagttgaatcattgggtggtgaatttttag 2024


Query: 2025 aagtgaaaatcaaagagagtggagaaggttcaggtggctatgcaaaacacatgtcaaagg 2084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2025 aagtgaaaatcaaagagagtggagaaggttcaggtggctatgcaaaacacatgtcaaagg 2084


Query: 2085 aatacattgaggctgaaatggcattgtttgaacgtcaatgtaaagaagtggatatcgtaa 2144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2085 aatacattgaggctgaaatggcattgtttgaacgtcaatgtaaagaagtggatatcgtaa 2144


Query: 2145 ttacaaccgctttaattccaggtgtacctgccccaaaattaattaccaaacaaatggttg 2204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2145 ttacaaccgctttaattccaggtgtacctgccccaaaattaattaccaaacaaatggttg 2204


Query: 2205 atcaaatgaaaccaggtagtgttattgtagatttagctgctgaaactggtggtaattgtg 2264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2205 atcaaatgaaaccaggtagtgttattgtagatttagctgctgaaactggtggtaattgtg 2264


Query: 2265 aattaacaaaaccaggcgaagcttataattataatggtgtttcaattattggtttcactg 2324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2265 aattaacaaaaccaggcgaagcttataattataatggtgtttcaattattggtttcactg 2324


Query: 2325 atttaccatcaaaaatggcaactcaatcaagtacactctatagtaataatatcgccaagt 2384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2325 atttaccatcaaaaatggcaactcaatcaagtacactctatagtaataatatcgccaagt 2384


Query: 2385 ttctcttatctttaggtaatgataaagatggtttcaaattagatttcactgatgaagttc 2444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2385 ttctcttatctttaggtaatgataaagatggtttcaaattagatttcactgatgaagttc 2444


Query: 2445 atagaggttcaacagtaacttataatggtactttaatttggccagccccaaagaaaccag 2504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2445 atagaggttcaacagtaacttataatggtactttaatttggccagccccaaagaaaccag 2504


Query: 2505 ttccagtgactccaccatcaccatcaacacctgttagtaataaagaaaaggttgagagta 2564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2505 ttccagtgactccaccatcaccatcaacacctgttagtaataaagaaaaggttgagagta 2564


Query: 2565 atcttgttaaagaagaaacttcattatttaataaaacattgaaatcagcattgggtgcaa 2624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2565 atcttgttaaagaagaaacttcattatttaataaaacattgaaatcagcattgggtgcaa 2624


Query: 2625 cagcagcaatgtgtggtgcagttgcaatgtcaatgggatta 2665
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 2625 cagcagcaatgtgtggtgcagttgcaatgtcaatgggatta 2665


Score = 1475 bits (744), Expect = 0.0
Identities = 744/744 (100%)
Strand = Plus / Plus


Query: 1 atatgccagttgttgtaactgtattaaatagttattcaggttgggcattggttgctgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atatgccagttgttgtaactgtattaaatagttattcaggttgggcattggttgctgaag 60


Query: 61 gtttcatgttagattcatccctattgaatattgttggtgcaattgttggttcaagtggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtttcatgttagattcatccctattgaatattgttggtgcaattgttggttcaagtggtg 120


Query: 121 caatcttatcatatatcatgtgtaaagctatgaatagaaatcttatgagtgttattttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caatcttatcatatatcatgtgtaaagctatgaatagaaatcttatgagtgttattttag 180


Query: 181 gtggtgttggtacatcaagtatgggaaaaggtgaagcaatgaaaatcacaggtactcaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtggtgttggtacatcaagtatgggaaaaggtgaagcaatgaaaatcacaggtactcaca 240


Query: 241 ctgaaatcaatgttgatcaagcaagtgaaatgattaccaactctaaaaatattctcattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgaaatcaatgttgatcaagcaagtgaaatgattaccaactctaaaaatattctcattg 300


Query: 301 taccaggttatggtatggttgttagtaaaagtcaatatccagttgcagagatggttaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taccaggttatggtatggttgttagtaaaagtcaatatccagttgcagagatggttaaaa 360


Query: 361 ctttaattgaaaaaggtcacaatgttaaatttggtattcatccagtagcaggtagattac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctttaattgaaaaaggtcacaatgttaaatttggtattcatccagtagcaggtagattac 420


Query: 421 caggtcacttgaatatttgcttaagtgaagcaaaggttccatatgacattgttttcgaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caggtcacttgaatatttgcttaagtgaagcaaaggttccatatgacattgttttcgaaa 480


Query: 481 tggaagaaattaatccagaaatgaaagatatagatttagcaatcgtaattggtgcaaatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tggaagaaattaatccagaaatgaaagatatagatttagcaatcgtaattggtgcaaatg 540


Query: 541 ataccgtcaatagtgcatcagttgaagatccaaattcaattatcgctggtatgccagtta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ataccgtcaatagtgcatcagttgaagatccaaattcaattatcgctggtatgccagtta 600


Query: 601 ttgaagtttggaaagcaaaacattgtatcgttatgaaacgttcattaacaaatgctggtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgaagtttggaaagcaaaacattgtatcgttatgaaacgttcattaacaaatgctggtt 660


Query: 661 atgccgatattcaaaatccagtattttataaaccaaatacttcaatgttattaggtgatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atgccgatattcaaaatccagtattttataaaccaaatacttcaatgttattaggtgatg 720


Query: 721 ctacaaacacttgtaaagaattgg 744
||||||||||||||||||||||||
Sbjct: 721 ctacaaacacttgtaaagaattgg 744


Score = 77.8 bits (39), Expect = 6e-14
Identities = 69/69 (100%)
Strand = Plus / Plus


Query: 976 taataataataaactttaaacannnnnnnnnntttcaccaaatcaaatcggaacaatttt 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976 taataataataaactttaaacannnnnnnnnntttcaccaaatcaaatcggaacaatttt 1035


Query: 1036 aaaaacaaa 1044
|||||||||
Sbjct: 1036 aaaaacaaa 1044


>Contig-U13789-1 (Contig-U13789-1Q) /CSM_Contig/Contig-U13789-1Q.Seq.d
Length = 714

Score = 728 bits (367), Expect = 0.0
Identities = 367/367 (100%)
Strand = Plus / Plus


Query: 1 atatgccagttgttgtaactgtattaaatagttattcaggttgggcattggttgctgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atatgccagttgttgtaactgtattaaatagttattcaggttgggcattggttgctgaag 120


Query: 61 gtttcatgttagattcatccctattgaatattgttggtgcaattgttggttcaagtggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtttcatgttagattcatccctattgaatattgttggtgcaattgttggttcaagtggtg 180


Query: 121 caatcttatcatatatcatgtgtaaagctatgaatagaaatcttatgagtgttattttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caatcttatcatatatcatgtgtaaagctatgaatagaaatcttatgagtgttattttag 240


Query: 181 gtggtgttggtacatcaagtatgggaaaaggtgaagcaatgaaaatcacaggtactcaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtggtgttggtacatcaagtatgggaaaaggtgaagcaatgaaaatcacaggtactcaca 300


Query: 241 ctgaaatcaatgttgatcaagcaagtgaaatgattaccaactctaaaaatattctcattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgaaatcaatgttgatcaagcaagtgaaatgattaccaactctaaaaatattctcattg 360


Query: 301 taccaggttatggtatggttgttagtaaaagtcaatatccagttgcagagatggttaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taccaggttatggtatggttgttagtaaaagtcaatatccagttgcagagatggttaaaa 420


Query: 361 ctttaat 367
|||||||
Sbjct: 421 ctttaat 427


Score = 492 bits (248), Expect = e-138
Identities = 251/252 (99%)
Strand = Plus / Plus


Query: 490 ttaatccagaaatgaaagatatagatttagcaatcgtaattggtgcaaatgataccgtca 549
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 423 ttaatccagaaatgaaagatatagatttagcgatcgtaattggtgcaaatgataccgtca 482


Query: 550 atagtgcatcagttgaagatccaaattcaattatcgctggtatgccagttattgaagttt 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 atagtgcatcagttgaagatccaaattcaattatcgctggtatgccagttattgaagttt 542


Query: 610 ggaaagcaaaacattgtatcgttatgaaacgttcattaacaaatgctggttatgccgata 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ggaaagcaaaacattgtatcgttatgaaacgttcattaacaaatgctggttatgccgata 602


Query: 670 ttcaaaatccagtattttataaaccaaatacttcaatgttattaggtgatgctacaaaca 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ttcaaaatccagtattttataaaccaaatacttcaatgttattaggtgatgctacaaaca 662


Query: 730 cttgtaaagaat 741
||||||||||||
Sbjct: 663 cttgtaaagaat 674


>Contig-U14711-1 (Contig-U14711-1Q) /CSM_Contig/Contig-U14711-1Q.Seq.d
Length = 1240

Score = 42.1 bits (21), Expect = 0.003
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 174 attttaggtggtgttggtaca 194
|||||||||||||||||||||
Sbjct: 729 attttaggtggtgttggtaca 749


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 44,460
Number of Sequences: 6905
Number of extensions: 44460
Number of successful extensions: 4178
Number of sequences better than 10.0: 106
length of query: 2665
length of database: 5,674,871
effective HSP length: 17
effective length of query: 2648
effective length of database: 5,557,486
effective search space: 14716222928
effective search space used: 14716222928
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2008.11.29
Homology vs DNA
Query= Contig-U12088-1 (Contig-U12088-1Q) /CSM_Contig/Contig-U12088-1Q.Seq.d
(2665 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ407081) Dictyostelium discoideum cDNA clone:dds37m08, 3' ... 1477 0.0 1
(BJ446683) Dictyostelium discoideum cDNA clone:ddv63c15, 3' ... 1453 0.0 1
(BJ439744) Dictyostelium discoideum cDNA clone:ddv41o11, 3' ... 1322 0.0 1
(BJ422532) Dictyostelium discoideum cDNA clone:ddv46a10, 5' ... 1241 0.0 1
(BJ418604) Dictyostelium discoideum cDNA clone:ddv33j11, 5' ... 1221 0.0 1
(BJ427198) Dictyostelium discoideum cDNA clone:ddv61k13, 5' ... 1203 0.0 1
(BJ425121) Dictyostelium discoideum cDNA clone:ddv54o17, 5' ... 1187 0.0 1
(BJ427760) Dictyostelium discoideum cDNA clone:ddv63c15, 5' ... 1179 0.0 1
(BJ438750) Dictyostelium discoideum cDNA clone:ddv38i10, 3' ... 1138 0.0 1
(BJ444702) Dictyostelium discoideum cDNA clone:ddv57o04, 3' ... 1136 0.0 1
(BJ437155) Dictyostelium discoideum cDNA clone:ddv33j11, 3' ... 1130 0.0 1
(BJ420899) Dictyostelium discoideum cDNA clone:ddv40e21, 5' ... 1122 0.0 1
(BJ421024) Dictyostelium discoideum cDNA clone:ddv41o11, 5' ... 1106 0.0 1
(BJ444165) Dictyostelium discoideum cDNA clone:ddv55p11, 3' ... 1092 0.0 2
(BJ423482) Dictyostelium discoideum cDNA clone:ddv49i09, 5' ... 1082 0.0 2
(BJ437908) Dictyostelium discoideum cDNA clone:ddv35b21, 3' ... 1070 0.0 1
(BJ445682) Dictyostelium discoideum cDNA clone:ddv60d12, 3' ... 1066 0.0 1
(BJ443382) Dictyostelium discoideum cDNA clone:ddv52b22, 3' ... 1066 0.0 2
(BJ420138) Dictyostelium discoideum cDNA clone:ddv38i10, 5' ... 1057 0.0 1
(BJ425359) Dictyostelium discoideum cDNA clone:ddv55p11, 5' ... 1035 0.0 1
(BJ422125) Dictyostelium discoideum cDNA clone:ddv44n23, 5' ... 1029 0.0 2
(BJ420088) Dictyostelium discoideum cDNA clone:ddv38o02, 5' ... 1027 0.0 1
(BJ419324) Dictyostelium discoideum cDNA clone:ddv35b21, 5' ... 1025 0.0 1
(BJ446092) Dictyostelium discoideum cDNA clone:ddv61k13, 3' ... 728 0.0 2
(BJ437952) Dictyostelium discoideum cDNA clone:ddv35k22, 3' ... 1015 0.0 1
(BJ440855) Dictyostelium discoideum cDNA clone:ddv44n23, 3' ... 1011 0.0 1
(BJ438695) Dictyostelium discoideum cDNA clone:ddv38o02, 3' ... 1011 0.0 1
(BJ442266) Dictyostelium discoideum cDNA clone:ddv49i09, 3' ... 936 0.0 2
(BJ395031) Dictyostelium discoideum cDNA clone:dds37m08, 5' ... 916 0.0 1
(BJ445988) Dictyostelium discoideum cDNA clone:ddv61e07, 3' ... 890 0.0 1
(BJ441280) Dictyostelium discoideum cDNA clone:ddv46a10, 3' ... 593 e-164 1
(BJ439541) Dictyostelium discoideum cDNA clone:ddv40e21, 3' ... 414 e-111 1
(BJ439910) Dictyostelium discoideum cDNA clone:ddv42d03, 3' ... 176 3e-39 1
(CT762453) Paramecium tetraurelia 3-PRIME EST from clone LK0... 54 1e-28 7
(CT803207) Paramecium tetraurelia 5-PRIME EST from clone LK0... 54 3e-24 7
(CT750778) Paramecium tetraurelia 5-PRIME EST from clone LK0... 54 4e-24 7
(CT763880) Paramecium tetraurelia 5-PRIME EST from clone LK0... 54 6e-23 7
(CT776454) Paramecium tetraurelia 5-PRIME EST from clone LK0... 54 2e-22 7
(CT789195) Paramecium tetraurelia 5-PRIME EST from clone LK0... 54 1e-19 6
(CT761665) Paramecium tetraurelia 5-PRIME EST from clone LK0... 54 1e-19 6
(CT802632) Paramecium tetraurelia 5-PRIME EST from clone LK0... 54 1e-19 6
(CT761765) Paramecium tetraurelia 5-PRIME EST from clone LK0... 54 1e-19 6
(CT764510) Paramecium tetraurelia 5-PRIME EST from clone LK0... 54 4e-19 6
(CT765196) Paramecium tetraurelia 5-PRIME EST from clone LK0... 54 7e-19 6
(CT814769) Paramecium tetraurelia 5-PRIME EST from clone LK0... 54 5e-18 6
(CT808998) Paramecium tetraurelia 5-PRIME EST from clone LK0... 54 7e-18 6
(CT796996) Paramecium tetraurelia 5-PRIME EST from clone LK0... 54 2e-17 6
(CT761988) Paramecium tetraurelia 5-PRIME EST from clone LK0... 72 7e-17 3
(CT760201) Paramecium tetraurelia 5-PRIME EST from clone LK0... 54 6e-16 5
(CT804082) Paramecium tetraurelia 5-PRIME EST from clone LK0... 54 1e-15 4
(CT753250) Paramecium tetraurelia 5-PRIME EST from clone LK0... 54 2e-14 4
(AM631001) Entamoeba dispar GSS, clone dispar62g11.p1k. 58 2e-12 4
(CT778881) Paramecium tetraurelia 5-PRIME EST from clone LK0... 72 2e-12 3
(EJ157992) 1092344036995 Global-Ocean-Sampling_GS-27-01-01-1... 50 2e-12 6
(CT749777) Paramecium tetraurelia 5-PRIME EST from clone LK0... 58 9e-12 3
(CT780404) Paramecium tetraurelia 5-PRIME EST from clone LK0... 46 1e-11 6
(FC592060) CAXP6821.fwd CAXP Lottia gigantea from head, foot... 60 2e-11 4
(CT775095) Paramecium tetraurelia 5-PRIME EST from clone LK0... 52 4e-11 4
(EK419423) 1095515491712 Global-Ocean-Sampling_GS-31-01-01-1... 48 1e-09 4
(AZ679183) ENTMV64TF Entamoeba histolytica Sheared DNA Entam... 58 1e-09 3
(AZ530469) ENTBJ57TR Entamoeba histolytica Sheared DNA Entam... 58 2e-09 3
(CT820842) Paramecium tetraurelia 5-PRIME EST from clone LK0... 54 2e-09 4
(AZ542305) ENTGN25TR Entamoeba histolytica Sheared DNA Entam... 58 2e-09 3
(FC777258) CBGC10282.fwd CBGC Lottia gigantea 15h 18h embryo... 60 2e-09 4
(EL644279) CBTC7890.fwd NICHD_XGC_tropBone1 Xenopus (Siluran... 62 3e-09 2
(EL644278) CBTC7890.rev NICHD_XGC_tropBone1 Xenopus (Siluran... 62 3e-09 2
(DT389276) JGI_CABH7614.fwd NIH_XGC_tropSkeMus1 Xenopus (Sil... 62 3e-09 2
(DT389275) JGI_CABH7614.rev NIH_XGC_tropSkeMus1 Xenopus (Sil... 62 3e-09 2
(L39933) Entamoeba histolytica pyridine nucleotidetranshydro... 58 3e-09 4
(FC685267) CAXX18131.fwd CAXX Lottia gigantea from male gona... 60 3e-09 4
(CS221224) Sequence 3239 from Patent WO2005111066. 58 4e-09 2
(BD426246) The Nucleotide Sequence of the Haemophilus influe... 58 4e-09 2
(DJ375998) Identification of Essential Genes in Prokaryotes. 58 4e-09 2
(EJ837416) 1093017679420 Global-Ocean-Sampling_GS-30-02-01-1... 54 5e-09 3
(ER401107) 1095351004577 Global-Ocean-Sampling_GS-34-01-01-1... 54 6e-09 3
(EJ920566) 1093018627741 Global-Ocean-Sampling_GS-30-02-01-1... 54 8e-09 3
(EA266310) Sequence 500 from patent US 7241867. 58 1e-08 2
(DD419462) GENES OF AN OTITIS MEDIA ISOLATE OF NONTYPEABLE H... 58 1e-08 2
(CQ872887) Sequence 500 from Patent WO2004078949. 58 1e-08 2
(U13421) Entamoeba histolytica HMI-IMSS nicotinamide nucleot... 58 2e-08 3
(AM593682) Paracentrotus lividus EST, clone MPMGp1173A0661Q,... 56 3e-08 2
(EJ420520) 1093012227620 Global-Ocean-Sampling_GS-28-01-01-1... 46 1e-07 5
(ER305664) 1092343746951 Global-Ocean-Sampling_GS-34-01-01-1... 48 2e-07 4
(EJ360855) 1092963686027 Global-Ocean-Sampling_GS-28-01-01-1... 38 3e-07 5
(CT792464) Paramecium tetraurelia 5-PRIME EST from clone LK0... 62 4e-07 2
(FG000597) CBWU116146.b1 Yutaka Satou unpublished cDNA libra... 48 7e-07 3
(EJ608355) 1092962025457 Global-Ocean-Sampling_GS-29-01-01-1... 50 1e-06 3
(CT818269) Paramecium tetraurelia 5-PRIME EST from clone LK0... 50 1e-06 3
(EK438480) 1095521346050 Global-Ocean-Sampling_GS-31-01-01-1... 44 2e-06 5
(CK202820) FGAS011346 Triticum aestivum FGAS: Library 3 Gate... 42 3e-06 4
(CK203141) FGAS011667 Triticum aestivum FGAS: Library 3 Gate... 42 3e-06 4
(CP000671) Haemophilus influenzae PittEE, complete genome. 58 3e-06 2
(BD426631) The Nucleotide Sequence of the Haemophilus influe... 58 3e-06 2
(AR632719) Sequence 1 from patent US 6846651. 58 3e-06 2
(AR274513) Sequence 1 from patent US 6506581. 58 3e-06 2
(L42023) Haemophilus influenzae Rd KW20, complete genome. 58 3e-06 2
(CP000672) Haemophilus influenzae PittGG, complete genome. 58 3e-06 2
(CP000057) Haemophilus influenzae 86-028NP, complete genome. 58 3e-06 2
(BW274636) Ciona intestinalis cDNA, clone:cign006f10, 5' end... 48 4e-06 3
(CT762133) Paramecium tetraurelia 5-PRIME EST from clone LK0... 50 4e-06 2

>(BJ407081) Dictyostelium discoideum cDNA clone:dds37m08, 3' end,
single read.
Length = 775

Score = 1477 bits (745), Expect = 0.0
Identities = 745/745 (100%)
Strand = Plus / Plus


Query: 1217 attaaaagaaatgtaacaaatagattattttatagtacattaaaagatcaaactggaagt 1276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 attaaaagaaatgtaacaaatagattattttatagtacattaaaagatcaaactggaagt 90


Query: 1277 gtattaccaacaacaccgaatcaaggaataacatcaattgatatggcattagaattaaca 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gtattaccaacaacaccgaatcaaggaataacatcaattgatatggcattagaattaaca 150


Query: 1337 aaagatgcaaaaggtattccatttgaacaattaactattggtatcccaactgaagtttat 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 aaagatgcaaaaggtattccatttgaacaattaactattggtatcccaactgaagtttat 210


Query: 1397 caaaatgaaaagagagtatcaatgacacctgaaaatgttggagttttggtgaaaaaaggt 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 caaaatgaaaagagagtatcaatgacacctgaaaatgttggagttttggtgaaaaaaggt 270


Query: 1457 tacaaagtgttagttgaagaaggagctggtaaaggtgcaaaattctctgatgctaaatat 1516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tacaaagtgttagttgaagaaggagctggtaaaggtgcaaaattctctgatgctaaatat 330


Query: 1517 attgaagccggtgcaaaaattacaactgcagctaatttattcaagaaaaccgatatatta 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 attgaagccggtgcaaaaattacaactgcagctaatttattcaagaaaaccgatatatta 390


Query: 1577 ctaaaggttagaggtccacaatttaatacaaacttgggtaaacatgaagttgaaatgatg 1636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ctaaaggttagaggtccacaatttaatacaaacttgggtaaacatgaagttgaaatgatg 450


Query: 1637 aaagaaggtgctacagtaattagctttttatcaccagcacaaaatgcagaaactttaaag 1696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aaagaaggtgctacagtaattagctttttatcaccagcacaaaatgcagaaactttaaag 510


Query: 1697 ttactatcacaaaagaaagctaatgccattgcagttgattgtataccaagaattagtaga 1756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ttactatcacaaaagaaagctaatgccattgcagttgattgtataccaagaattagtaga 570


Query: 1757 gcacaggtttttgatggtttatcatcaatggcaaatattgcaggttataaagcagtgatg 1816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gcacaggtttttgatggtttatcatcaatggcaaatattgcaggttataaagcagtgatg 630


Query: 1817 gaggcatccaactattttggtagattctttggtggagccattacagccgctggtagagtt 1876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gaggcatccaactattttggtagattctttggtggagccattacagccgctggtagagtt 690


Query: 1877 cagcctgctaaagtattggttattggtgctggtgttgctggtttatctgctattggtacc 1936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 cagcctgctaaagtattggttattggtgctggtgttgctggtttatctgctattggtacc 750


Query: 1937 gctaaaaatattggtgctatcgtta 1961
|||||||||||||||||||||||||
Sbjct: 751 gctaaaaatattggtgctatcgtta 775

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,893,374,407
Number of extensions: 168222980
Number of successful extensions: 13631641
Number of sequences better than 10.0: 520
Length of query: 2665
Length of database: 95,242,211,685
Length adjustment: 25
Effective length of query: 2640
Effective length of database: 97,216,030,006
Effective search space: 256650319215840
Effective search space used: 256650319215840
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7. 2
Homology vs Protein
Query= Contig-U12088-1 (Contig-U12088-1Q) /CSM_Contig/Contig-U12088-1Q.Seq.d
(2665 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

CP000828_4238(CP000828|pid:none) Acaryochloris marina MBIC11017,... 427 e-117
T48756(T48756)mitochondrial nicotinamide nucleotide transhydroge... 426 e-117
(Q13423) RecName: Full=NAD(P) transhydrogenase, mitochondrial; ... 426 e-117
G02257(G02257) NAD(P) transhydrogenase (B-specific) (EC 1.6.1.1)... 424 e-117
AM920436_1880(AM920436|pid:none) Penicillium chrysogenum Wiscons... 423 e-116
Z50101_1(Z50101|pid:none) H.sapiens mRNA for NAD(P) transhydroge... 422 e-116
(P11024) RecName: Full=NAD(P) transhydrogenase, mitochondrial; ... 421 e-116
AM270025_32(AM270025|pid:none) Aspergillus niger contig An02c030... 421 e-116
FN357613_3(FN357613|pid:none) Schistosoma mansoni genome sequenc... 419 e-115
BC166246_1(BC166246|pid:none) Xenopus tropicalis hypothetical pr... 419 e-115
BC091271_1(BC091271|pid:none) Rattus norvegicus nicotinamide nuc... 418 e-115
AY007197_1(AY007197|pid:none) Acetabularia acetabulum NAD(P)H tr... 417 e-114
S54876(S54876) NAD(P) transhydrogenase (B-specific) (EC 1.6.1.1)... 414 e-114
AK088044_1(AK088044|pid:none) Mus musculus 2 days neonate thymus... 414 e-114
AK159694_1(AK159694|pid:none) Mus musculus osteoclast-like cell ... 412 e-113
T15521(T15521) hypothetical protein C15H9.1 - Caenorhabditis ele... 409 e-112
CU640366_753(CU640366|pid:none) Podospora anserina genomic DNA c... 409 e-112
AM260480_1694(AM260480|pid:none) Ralstonia eutropha H16 chromoso... 404 e-111
BA000022_958(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA, ... 401 e-110
CP001291_1366(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 400 e-109
CU633750_1474(CU633750|pid:none) Cupriavidus taiwanensis str. LM... 396 e-108
CP000749_2256(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 385 e-105
CP000155_2891(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 382 e-104
BX571866_109(BX571866|pid:none) Photorhabdus luminescens subsp. ... 382 e-104
CP000961_2805(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 377 e-103
AM942759_1183(AM942759|pid:none) Proteus mirabilis strain HI4320... 377 e-103
DQ523830_1(DQ523830|pid:none) Enterobacter cloacae strain SLD1a-... 376 e-102
AE004439_753(AE004439|pid:none) Pasteurella multocida subsp. mul... 375 e-102
AP008232_1488(AP008232|pid:none) Sodalis glossinidius str. 'mors... 375 e-102
CP000947_100(CP000947|pid:none) Haemophilus somnus 2336, complet... 374 e-102
CP001616_2760(CP001616|pid:none) Tolumonas auensis DSM 9187, com... 374 e-102
CP000436_236(CP000436|pid:none) Haemophilus somnus 129PT, comple... 374 e-101
FM211048_63(FM211048|pid:none) Photorhabdus asymbiotica subsp. a... 373 e-101
CP000826_2576(CP000826|pid:none) Serratia proteamaculans 568, co... 373 e-101
CP000821_1754(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 373 e-101
AP006725_2288(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 373 e-101
CP001281_1605(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 372 e-101
CP000647_1496(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 372 e-101
AE009952_2101(AE009952|pid:none) Yersinia pestis KIM, complete g... 372 e-101
BX950851_2181(BX950851|pid:none) Erwinia carotovora subsp. atros... 372 e-101
CP000964_2871(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 372 e-101
AE014075_1933(AE014075|pid:none) Escherichia coli CFT073, comple... 371 e-101
CP000150_698(CP000150|pid:none) Burkholderia sp. 383 chromosome ... 370 e-100
CP000671_766(CP000671|pid:none) Haemophilus influenzae PittEE, c... 370 e-100
CP000057_1574(CP000057|pid:none) Haemophilus influenzae 86-028NP... 370 e-100
CP000720_1801(CP000720|pid:none) Yersinia pseudotuberculosis IP ... 370 e-100
CP000243_1759(CP000243|pid:none) Escherichia coli UTI89, complet... 370 e-100
CP000800_1722(CP000800|pid:none) Escherichia coli E24377A, compl... 370 e-100
(P07001) RecName: Full=NAD(P) transhydrogenase subunit alpha; ... 370 e-100
CP000034_1450(CP000034|pid:none) Shigella dysenteriae Sd197, com... 370 e-100
CP001048_2265(CP001048|pid:none) Yersinia pseudotuberculosis PB1... 370 e-100
CU928163_1862(CU928163|pid:none) Escherichia coli UMN026 chromos... 369 e-100
AM286415_1976(AM286415|pid:none) Yersinia enterocolitica subsp. ... 369 e-100
AE005674_1624(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 368 e-100
CP001133_586(CP001133|pid:none) Vibrio fischeri MJ11 chromosome ... 367 1e-99
CR378678_1(CR378678|pid:none) Photobacterium profundum SS9 chrom... 367 2e-99
CP000822_1564(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 367 2e-99
AE016827_1224(AE016827|pid:none) Mannheimia succiniciproducens M... 366 2e-99
CP000644_210(CP000644|pid:none) Aeromonas salmonicida subsp. sal... 366 3e-99
AE006468_1434(AE006468|pid:none) Salmonella enterica subsp. ente... 365 5e-99
EU900720_1(EU900720|pid:none) Escherichia coli strain 493/89 pyr... 365 6e-99
AE005174_2356(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 365 6e-99
AE017220_1497(AE017220|pid:none) Salmonella enterica subsp. ente... 365 6e-99
CP001164_2067(CP001164|pid:none) Escherichia coli O157:H7 str. E... 365 6e-99
CP000880_1441(CP000880|pid:none) Salmonella enterica subsp. ariz... 364 8e-99
FM178380_623(FM178380|pid:none) Aliivibrio salmonicida LFI1238 c... 364 1e-98
CP000563_3357(CP000563|pid:none) Shewanella baltica OS155, compl... 364 1e-98
CP000469_847(CP000469|pid:none) Shewanella sp. ANA-3, complete g... 363 2e-98
CP000687_802(CP000687|pid:none) Actinobacillus pleuropneumoniae ... 363 2e-98
AP007255_2824(AP007255|pid:none) Magnetospirillum magneticum AMB... 362 3e-98
CP000569_830(CP000569|pid:none) Actinobacillus pleuropneumoniae ... 362 4e-98
CP001091_899(CP001091|pid:none) Actinobacillus pleuropneumoniae ... 362 4e-98
AL157959_1052(AL157959|pid:none) Neisseria meningitidis serogrou... 362 5e-98
CP001027_26(CP001027|pid:none) Burkholderia ambifaria MC40-6 chr... 362 5e-98
CP000746_1005(CP000746|pid:none) Actinobacillus succinogenes 130... 361 9e-98
CP000507_2830(CP000507|pid:none) Shewanella amazonensis SB2B, co... 360 1e-97
FM954973_709(FM954973|pid:none) Vibrio splendidus LGP32 chromoso... 360 1e-97
CP000446_3070(CP000446|pid:none) Shewanella sp. MR-4, complete g... 360 1e-97
AE002098_946(AE002098|pid:none) Neisseria meningitidis MC58, com... 360 2e-97
BA000032_922(BA000032|pid:none) Vibrio parahaemolyticus RIMD 221... 358 4e-97
CP000577_1867(CP000577|pid:none) Rhodobacter sphaeroides ATCC 17... 357 1e-96
CP000503_877(CP000503|pid:none) Shewanella sp. W3-18-1, complete... 357 1e-96
CU207211_310(CU207211|pid:none) Herminiimonas arsenicoxydans chr... 355 5e-96
BT072456_1(BT072456|pid:none) Salmo salar clone ssal-rgf-526-105... 355 6e-96
BA000038_812(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, chr... 352 4e-95
AK085903_1(AK085903|pid:none) Mus musculus 16 days neonate heart... 350 2e-94
AK040460_1(AK040460|pid:none) Mus musculus 0 day neonate thymus ... 350 2e-94
CP000285_2474(CP000285|pid:none) Chromohalobacter salexigens DSM... 350 2e-94
AK299622_1(AK299622|pid:none) Homo sapiens cDNA FLJ57576 complet... 349 3e-94
AK297558_1(AK297558|pid:none) Homo sapiens cDNA FLJ61320 complet... 349 3e-94
CP000447_3168(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 348 8e-94
CP000302_922(CP000302|pid:none) Shewanella denitrificans OS217, ... 348 8e-94
CP000083_1732(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 347 2e-93
CP001142_397(CP001142|pid:none) Phaeodactylum tricornutum CCAP 1... 347 2e-93
CP000633_2856(CP000633|pid:none) Agrobacterium vitis S4 chromoso... 346 2e-93
AE003853_551(AE003853|pid:none) Vibrio cholerae O1 biovar eltor ... 345 4e-93
CP000031_2755(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 340 2e-91
AJ131355_1(AJ131355|pid:none) Strongylocentrotus purpuratus mRNA... 336 2e-90
DQ021254_1(DQ021254|pid:none) Vibrio cholerae isolate 395 NAD(P)... 335 5e-90
DQ021259_1(DQ021259|pid:none) Vibrio cholerae isolate 141-94 NAD... 335 7e-90
CP001389_652(CP001389|pid:none) Rhizobium sp. NGR234, complete g... 334 1e-89
DQ021258_1(DQ021258|pid:none) Vibrio cholerae isolate 1085-93 NA... 333 2e-89
CP000362_3087(CP000362|pid:none) Roseobacter denitrificans OCh 1... 332 3e-89
CP000377_708(CP000377|pid:none) Silicibacter sp. TM1040, complet... 329 4e-88
CP000264_3282(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 329 4e-88
CP000656_715(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, co... 322 6e-86
AM236082_42(AM236082|pid:none) Rhizobium leguminosarum bv. vicia... 321 8e-86
CP000490_1198(CP000490|pid:none) Paracoccus denitrificans PD1222... 321 1e-85
CU928158_1369(CU928158|pid:none) Escherichia fergusonii ATCC 354... 306 3e-81
CP000746_1006(CP000746|pid:none) Actinobacillus succinogenes 130... 306 3e-81
CP000783_1901(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 306 3e-81
CP000970_1535(CP000970|pid:none) Escherichia coli SMS-3-5, compl... 305 4e-81
AE006468_1435(AE006468|pid:none) Salmonella enterica subsp. ente... 305 4e-81
AE017220_1498(AE017220|pid:none) Salmonella enterica subsp. ente... 305 4e-81
(P0AB67) RecName: Full=NAD(P) transhydrogenase subunit beta; ... 305 4e-81
AE004439_752(AE004439|pid:none) Pasteurella multocida subsp. mul... 305 6e-81
CP001144_1704(CP001144|pid:none) Salmonella enterica subsp. ente... 304 1e-80
AE017143_1410(AE017143|pid:none) Haemophilus ducreyi strain 3500... 304 1e-80
CP000964_2870(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 303 2e-80
AE016827_1223(AE016827|pid:none) Mannheimia succiniciproducens M... 303 2e-80
CP001275_471(CP001275|pid:none) Thermomicrobium roseum DSM 5159,... 303 2e-80
BX571866_110(BX571866|pid:none) Photorhabdus luminescens subsp. ... 303 3e-80
BA000030_405(BA000030|pid:none) Streptomyces avermitilis MA-4680... 302 4e-80
CP000503_876(CP000503|pid:none) Shewanella sp. W3-18-1, complete... 302 5e-80
CP000687_801(CP000687|pid:none) Actinobacillus pleuropneumoniae ... 301 8e-80
CP000569_829(CP000569|pid:none) Actinobacillus pleuropneumoniae ... 301 8e-80
AE017283_616(AE017283|pid:none) Propionibacterium acnes KPA17120... 301 8e-80
DQ523830_2(DQ523830|pid:none) Enterobacter cloacae strain SLD1a-... 301 1e-79
AE003853_552(AE003853|pid:none) Vibrio cholerae O1 biovar eltor ... 300 2e-79
AM286415_1975(AM286415|pid:none) Yersinia enterocolitica subsp. ... 300 2e-79
CP000057_1573(CP000057|pid:none) Haemophilus influenzae 86-028NP... 300 2e-79
CP000753_898(CP000753|pid:none) Shewanella baltica OS185, comple... 299 3e-79
CP000563_3358(CP000563|pid:none) Shewanella baltica OS155, compl... 299 3e-79
CP000790_997(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 chr... 299 3e-79
BA000032_921(BA000032|pid:none) Vibrio parahaemolyticus RIMD 221... 299 4e-79
AE014299_3637(AE014299|pid:none) Shewanella oneidensis MR-1, com... 299 4e-79
BX950851_2182(BX950851|pid:none) Erwinia carotovora subsp. atros... 298 5e-79
(P43010) RecName: Full=NAD(P) transhydrogenase subunit beta; ... 298 7e-79
CP001341_1700(CP001341|pid:none) Arthrobacter chlorophenolicus A... 298 7e-79
CP000117_3411(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 298 9e-79
BA000030_404(BA000030|pid:none) Streptomyces avermitilis MA-4680... 297 1e-78
CP000083_1733(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 297 1e-78
T18292(T18292) nicotinamide nucleotide transhydrogenase homolog ... 297 1e-78
CP000644_211(CP000644|pid:none) Aeromonas salmonicida subsp. sal... 297 2e-78
CP000282_954(CP000282|pid:none) Saccharophagus degradans 2-40, c... 297 2e-78
CP000821_1755(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 296 2e-78
CP000653_1838(CP000653|pid:none) Enterobacter sp. 638, complete ... 296 2e-78
CP000454_1803(CP000454|pid:none) Arthrobacter sp. FB24, complete... 296 2e-78
A81885(A81885) probable NAD(P) transhydrogenase (B-specific) (EC... 296 3e-78
AM421808_905(AM421808|pid:none) Neisseria meningitidis serogroup... 296 3e-78
CP000961_2804(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 295 4e-78
AM942759_1184(AM942759|pid:none) Proteus mirabilis strain HI4320... 295 6e-78
CP000381_875(CP000381|pid:none) Neisseria meningitidis 053442, c... 295 6e-78
CP001291_1367(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 295 6e-78
CP000749_2257(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 293 3e-77
CP000828_4239(CP000828|pid:none) Acaryochloris marina MBIC11017,... 292 5e-77
CP000384_100(CP000384|pid:none) Mycobacterium sp. MCS, complete ... 291 6e-77
CP000480_102(CP000480|pid:none) Mycobacterium smegmatis str. MC2... 291 6e-77
AM942444_1514(AM942444|pid:none) Corynebacterium urealyticum DSM... 291 6e-77
CP000613_2022(CP000613|pid:none) Rhodospirillum centenum SW, com... 291 6e-77
AP008232_1487(AP008232|pid:none) Sodalis glossinidius str. 'mors... 291 8e-77
CP000507_2831(CP000507|pid:none) Shewanella amazonensis SB2B, co... 290 1e-76
CP000509_256(CP000509|pid:none) Nocardioides sp. JS614, complete... 289 4e-76
CP000509_255(CP000509|pid:none) Nocardioides sp. JS614, complete... 289 4e-76
CP000616_180(CP000616|pid:none) Burkholderia vietnamiensis G4 ch... 288 7e-76
CP000431_2688(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 288 9e-76
CP000490_1197(CP000490|pid:none) Paracoccus denitrificans PD1222... 288 9e-76
CP000267_3691(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 287 2e-75
CP001154_3211(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 286 2e-75
CP000377_707(CP000377|pid:none) Silicibacter sp. TM1040, complet... 286 3e-75
AL939132_80(AL939132|pid:none) Streptomyces coelicolor A3(2) com... 285 5e-75
CP000442_206(CP000442|pid:none) Burkholderia ambifaria AMMD chro... 285 6e-75
CP000319_1153(CP000319|pid:none) Nitrobacter hamburgensis X14, c... 285 6e-75
CP000806_842(CP000806|pid:none) Cyanothece sp. ATCC 51142 circul... 285 8e-75
CP000449_2537(CP000449|pid:none) Maricaulis maris MCS10, complet... 285 8e-75
CP000450_1153(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 284 1e-74
CP000480_3967(CP000480|pid:none) Mycobacterium smegmatis str. MC... 284 1e-74
CP000031_2754(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 284 1e-74
BA000040_7126(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 284 1e-74
CP001281_1604(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 283 2e-74
CP000362_3086(CP000362|pid:none) Roseobacter denitrificans OCh 1... 283 2e-74
CP000927_884(CP000927|pid:none) Caulobacter sp. K31, complete ge... 283 3e-74
CP000934_175(CP000934|pid:none) Cellvibrio japonicus Ueda107, co... 283 3e-74
CP001287_2787(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 283 3e-74
CP000283_1412(CP000283|pid:none) Rhodopseudomonas palustris BisB... 283 3e-74
CP000269_377(CP000269|pid:none) Janthinobacterium sp. Marseille,... 281 7e-74
AE005673_3279(AE005673|pid:none) Caulobacter crescentus CB15, co... 281 9e-74
CP001340_3412(CP001340|pid:none) Caulobacter crescentus NA1000, ... 281 9e-74
CP000091_1194(CP000091|pid:none) Ralstonia eutropha JMP134 chrom... 281 1e-73
CP000633_2855(CP000633|pid:none) Agrobacterium vitis S4 chromoso... 281 1e-73
CP000884_335(CP000884|pid:none) Delftia acidovorans SPH-1, compl... 281 1e-73
CU207211_311(CU207211|pid:none) Herminiimonas arsenicoxydans chr... 280 1e-73
CP000155_2890(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 280 1e-73
CP000510_544(CP000510|pid:none) Psychromonas ingrahamii 37, comp... 280 2e-73
CP000115_989(CP000115|pid:none) Nitrobacter winogradskyi Nb-255,... 280 2e-73
CU459003_898(CU459003|pid:none) Magnetospirillum gryphiswaldense... 280 2e-73
AL954747_860(AL954747|pid:none) Nitrosomonas europaea ATCC 19718... 280 3e-73
CP001392_3243(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 278 1e-72
CU633750_1473(CU633750|pid:none) Cupriavidus taiwanensis str. LM... 277 1e-72
CP000539_3804(CP000539|pid:none) Acidovorax sp. JS42, complete g... 277 1e-72
CP000285_2473(CP000285|pid:none) Chromohalobacter salexigens DSM... 277 2e-72
CP001339_262(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, c... 276 3e-72
BX640430_209(BX640430|pid:none) Bordetella parapertussis strain ... 275 5e-72
AB3550(AB3550) NAD(P) transhydrogenase (AB-specific) (EC 1.6.1.2... 275 5e-72
BX572606_171(BX572606|pid:none) Rhodopseudomonas palustris CGA00... 275 5e-72
CP000471_2092(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 275 6e-72
CP000631_205(CP000631|pid:none) Agrobacterium radiobacter K84 pl... 275 6e-72
CP001150_1563(CP001150|pid:none) Rhodobacter sphaeroides KD131 c... 275 8e-72
A97659(A97659) pyridine nucleotide transhydrogenase beta chain (... 275 8e-72
AY026033_2(AY026033|pid:none) Rhodobacter sphaeroides pyridine n... 275 8e-72
AE014292_933(AE014292|pid:none) Brucella suis 1330 chromosome II... 274 1e-71
CP000301_3915(CP000301|pid:none) Rhodopseudomonas palustris BisB... 274 1e-71
AM260480_1693(AM260480|pid:none) Ralstonia eutropha H16 chromoso... 273 2e-71
AM902716_2742(AM902716|pid:none) Bordetella petrii strain DSM 12... 273 2e-71
CP000473_3332(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 273 2e-71
AM236082_43(AM236082|pid:none) Rhizobium leguminosarum bv. vicia... 273 3e-71
AY316747_123(AY316747|pid:none) Rhizobium sp. NGR234 megaplasmid... 273 3e-71
AY316746_210(AY316746|pid:none) Rhizobium sp. NGR234 megaplasmid... 272 5e-71
AE017224_242(AE017224|pid:none) Brucella abortus biovar 1 str. 9... 271 7e-71
CP000158_1125(CP000158|pid:none) Hyphomonas neptunium ATCC 15444... 271 9e-71
CP000316_4464(CP000316|pid:none) Polaromonas sp. JS666, complete... 270 2e-70
CP000494_6440(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 270 2e-70
AM260479_1252(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 270 2e-70
AE016825_101(AE016825|pid:none) Chromobacterium violaceum ATCC 1... 269 3e-70
CP000090_2802(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 268 6e-70
AE010300_52(AE010300|pid:none) Leptospira interrogans serovar la... 268 6e-70
CP001087_581(CP001087|pid:none) Desulfobacterium autotrophicum H... 268 8e-70
CP000159_2153(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 267 1e-69
CP000951_971(CP000951|pid:none) Synechococcus sp. PCC 7002, comp... 267 2e-69
CP001614_789(CP001614|pid:none) Teredinibacter turnerae T7901, c... 267 2e-69
AP009552_6196(AP009552|pid:none) Microcystis aeruginosa NIES-843... 266 2e-69
CP000378_214(CP000378|pid:none) Burkholderia cenocepacia AU 1054... 266 2e-69
AE017283_617(AE017283|pid:none) Propionibacterium acnes KPA17120... 266 3e-69
CU633749_2544(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 266 3e-69
CP000544_2245(CP000544|pid:none) Halorhodospira halophila SL1, c... 266 3e-69
CP000091_1817(CP000091|pid:none) Ralstonia eutropha JMP134 chrom... 266 4e-69
CP000738_2729(CP000738|pid:none) Sinorhizobium medicae WSM419, c... 266 4e-69
CP001068_2925(CP001068|pid:none) Ralstonia pickettii 12J chromos... 266 4e-69
AM778939_74(AM778939|pid:none) Microcystis aeruginosa PCC 7806 g... 265 6e-69
CP000438_196(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA1... 265 6e-69
AL646052_2728(AL646052|pid:none) Ralstonia solanacearum GMI1000 ... 265 8e-69
CP000481_2018(CP000481|pid:none) Acidothermus cellulolyticus 11B... 264 1e-68
CP000878_1222(CP000878|pid:none) Prochlorococcus marinus str. MI... 264 1e-68
CP000554_855(CP000554|pid:none) Prochlorococcus marinus str. MIT... 264 1e-68
CP000744_275(CP000744|pid:none) Pseudomonas aeruginosa PA7, comp... 264 1e-68
AL591688_2871(AL591688|pid:none) Sinorhizobium meliloti 1021 com... 264 1e-68
CP000092_480(CP000092|pid:none) Ralstonia eutropha JMP134 megapl... 263 2e-68
CP000151_604(CP000151|pid:none) Burkholderia sp. 383 chromosome ... 263 2e-68
CP000526_275(CP000526|pid:none) Burkholderia mallei SAVP1 chromo... 263 2e-68
CP001052_662(CP001052|pid:none) Burkholderia phytofirmans PsJN c... 263 3e-68
AE016828_1881(AE016828|pid:none) Coxiella burnetii RSA 493, comp... 263 3e-68
CP001298_2854(CP001298|pid:none) Methylobacterium chloromethanic... 262 4e-68
AP009385_545(AP009385|pid:none) Burkholderia multivorans ATCC 17... 262 4e-68
CP000133_3564(CP000133|pid:none) Rhizobium etli CFN 42, complete... 262 4e-68
CP001510_2735(CP001510|pid:none) Methylobacterium extorquens AM1... 262 4e-68
CP001020_61(CP001020|pid:none) Coxiella burnetii CbuK_Q154, comp... 262 5e-68
CP000282_1272(CP000282|pid:none) Saccharophagus degradans 2-40, ... 262 5e-68
CP000780_1309(CP000780|pid:none) Candidatus Methanoregula boonei... 262 5e-68
CP000863_571(CP000863|pid:none) Acinetobacter baumannii ACICU, c... 261 7e-68
CP001131_3082(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 261 9e-68
CP000058_4863(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 261 9e-68
CU458896_4545(CU458896|pid:none) Mycobacterium abscessus chromos... 261 9e-68
CP001359_3179(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 261 1e-67
CP000712_173(CP000712|pid:none) Pseudomonas putida F1, complete ... 260 2e-67
CP000552_1311(CP000552|pid:none) Prochlorococcus marinus str. MI... 260 2e-67
CP000908_2721(CP000908|pid:none) Methylobacterium extorquens PA1... 260 2e-67
CP000576_1338(CP000576|pid:none) Prochlorococcus marinus str. MI... 259 3e-67
CU694390_61(CU694390|pid:none) Ralstonia solanacearum strain Mol... 259 3e-67
CP000949_5040(CP000949|pid:none) Pseudomonas putida W619, comple... 259 3e-67
L07954_1(L07954|pid:none) Eimeria tenella homologue of E.coli tr... 259 4e-67
CP001635_391(CP001635|pid:none) Variovorax paradoxus S110 chromo... 259 4e-67
CP001636_707(CP001636|pid:none) Variovorax paradoxus S110 chromo... 259 4e-67
CP000352_2950(CP000352|pid:none) Ralstonia metallidurans CH34, c... 258 6e-67
CT978603_360(CT978603|pid:none) Synechococcus sp. RCC307 genomic... 258 6e-67
CP000480_145(CP000480|pid:none) Mycobacterium smegmatis str. MC2... 258 6e-67
DQ366718_41(DQ366718|pid:none) Uncultured Prochlorococcus marinu... 258 8e-67
CT573326_107(CT573326|pid:none) Pseudomonas entomophila str. L48... 258 8e-67
CP000076_115(CP000076|pid:none) Pseudomonas fluorescens Pf-5, co... 258 1e-66
CU234118_1132(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 257 1e-66
BX572606_169(BX572606|pid:none) Rhodopseudomonas palustris CGA00... 257 1e-66
CP000494_6438(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 257 1e-66
AL646052_2731(AL646052|pid:none) Ralstonia solanacearum GMI1000 ... 257 1e-66
CP000514_366(CP000514|pid:none) Marinobacter aquaeolei VT8, comp... 257 1e-66
CP000931_3511(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 257 1e-66
CP000304_121(CP000304|pid:none) Pseudomonas stutzeri A1501, comp... 257 2e-66
CP000975_1476(CP000975|pid:none) Methylacidiphilum infernorum V4... 257 2e-66
AL646053_950(AL646053|pid:none) Ralstonia solanacearum GMI1000 m... 257 2e-66
CP000090_2805(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 256 2e-66
CU633749_2547(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 256 2e-66
CP000825_1349(CP000825|pid:none) Prochlorococcus marinus str. MI... 256 2e-66
CP000680_4403(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 256 2e-66
AP011115_1286(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 256 3e-66
CP000847_1224(CP000847|pid:none) Rickettsia akari str. Hartford,... 256 3e-66
CP000094_114(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, c... 256 3e-66
AM902716_2744(AM902716|pid:none) Bordetella petrii strain DSM 12... 256 4e-66
AF440524_22(AF440524|pid:none) Pseudomonas aeruginosa strain SG1... 256 4e-66
AE017126_1239(AE017126|pid:none) Prochlorococcus marinus subsp. ... 256 4e-66
AL583926_121(AL583926|pid:none) Mycobacterium leprae strain TN c... 256 4e-66
AE004091_197(AE004091|pid:none) Pseudomonas aeruginosa PAO1, com... 255 5e-66
AM181176_110(AM181176|pid:none) Pseudomonas fluorescens SBW25 co... 255 5e-66
FM209186_197(FM209186|pid:none) Pseudomonas aeruginosa LESB58 co... 255 5e-66
AL591688_2869(AL591688|pid:none) Sinorhizobium meliloti 1021 com... 255 5e-66
CU914168_2504(CU914168|pid:none) Ralstonia solanacearum strain I... 255 7e-66
CP000854_373(CP000854|pid:none) Mycobacterium marinum M, complet... 255 7e-66
AP006618_1020(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 255 7e-66
CP000075_5015(CP000075|pid:none) Pseudomonas syringae pv. syring... 255 7e-66
AM181176_112(AM181176|pid:none) Pseudomonas fluorescens SBW25 co... 255 7e-66
CP000091_2245(CP000091|pid:none) Ralstonia eutropha JMP134 chrom... 254 9e-66
CP000097_678(CP000097|pid:none) Synechococcus sp. CC9902, comple... 254 9e-66
CP000449_2539(CP000449|pid:none) Maricaulis maris MCS10, complet... 254 1e-65
CP000352_2952(CP000352|pid:none) Ralstonia metallidurans CH34, c... 254 1e-65
CP000092_181(CP000092|pid:none) Ralstonia eutropha JMP134 megapl... 254 1e-65
CP000325_3881(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 254 1e-65
CP000110_1935(CP000110|pid:none) Synechococcus sp. CC9605, compl... 254 1e-65
CP001612_1001(CP001612|pid:none) Rickettsia africae ESF-5, compl... 254 1e-65
CP000874_1454(CP000874|pid:none) Rhizobium sp. NGR234 plasmid pN... 254 1e-65
AM747720_3330(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 254 1e-65
CP000958_666(CP000958|pid:none) Burkholderia cenocepacia MC0-3 c... 254 1e-65
CP000076_113(CP000076|pid:none) Pseudomonas fluorescens Pf-5, co... 254 1e-65
AM260479_3054(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 254 1e-65
CP000087_45(CP000087|pid:none) Rickettsia bellii RML369-C, compl... 254 1e-65
CP001503_573(CP001503|pid:none) Burkholderia glumae BGR1 chromos... 254 1e-65
CP001068_2928(CP001068|pid:none) Ralstonia pickettii 12J chromos... 253 2e-65
AY316746_212(AY316746|pid:none) Rhizobium sp. NGR234 megaplasmid... 253 2e-65
CP000075_5017(CP000075|pid:none) Pseudomonas syringae pv. syring... 253 2e-65
CT573326_105(CT573326|pid:none) Pseudomonas entomophila str. L48... 253 3e-65
CP000091_1815(CP000091|pid:none) Ralstonia eutropha JMP134 chrom... 253 3e-65
CP000699_1174(CP000699|pid:none) Sphingomonas wittichii RW1, com... 253 3e-65
CP000378_216(CP000378|pid:none) Burkholderia cenocepacia AU 1054... 253 3e-65
CP000089_1487(CP000089|pid:none) Dechloromonas aromatica RCB, co... 253 3e-65
CP000115_991(CP000115|pid:none) Nitrobacter winogradskyi Nb-255,... 253 3e-65
AM260479_1254(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 253 3e-65
AE005673_3277(AE005673|pid:none) Caulobacter crescentus CB15, co... 253 3e-65
CP000683_953(CP000683|pid:none) Rickettsia massiliae MTU5, compl... 253 3e-65
AE006914_1334(AE006914|pid:none) Rickettsia conorii str. Malish ... 253 3e-65
CP000777_3043(CP000777|pid:none) Leptospira biflexa serovar Pato... 253 3e-65
CP000010_2065(CP000010|pid:none) Burkholderia mallei ATCC 23344 ... 252 4e-65
CP000094_112(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, c... 252 4e-65
AF440524_24(AF440524|pid:none) Pseudomonas aeruginosa strain SG1... 252 4e-65
BX571965_2912(BX571965|pid:none) Burkholderia pseudomallei strai... 252 4e-65
CP000151_606(CP000151|pid:none) Burkholderia sp. 383 chromosome ... 252 4e-65
CP001052_664(CP001052|pid:none) Burkholderia phytofirmans PsJN c... 252 4e-65
CP000949_5042(CP000949|pid:none) Pseudomonas putida W619, comple... 252 4e-65
CP000713_629(CP000713|pid:none) Psychrobacter sp. PRwf-1, comple... 252 4e-65
CP001013_426(CP001013|pid:none) Leptothrix cholodnii SP-6, compl... 252 4e-65
AE016853_5331(AE016853|pid:none) Pseudomonas syringae pv. tomato... 252 6e-65
CP000927_888(CP000927|pid:none) Caulobacter sp. K31, complete ge... 252 6e-65
CP000680_4405(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 252 6e-65
CP000248_1836(CP000248|pid:none) Novosphingobium aromaticivorans... 252 6e-65
CP000058_4865(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 251 7e-65
CP001157_178(CP001157|pid:none) Azotobacter vinelandii DJ, compl... 251 7e-65
AE016958_3572(AE016958|pid:none) Mycobacterium avium subsp. para... 251 7e-65
CP000082_557(CP000082|pid:none) Psychrobacter arcticus 273-4, co... 251 1e-64
CR628337_913(CR628337|pid:none) Legionella pneumophila str. Lens... 251 1e-64
CP000713_631(CP000713|pid:none) Psychrobacter sp. PRwf-1, comple... 251 1e-64
CP000356_1369(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 251 1e-64
CP000781_1935(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 250 2e-64
CP000323_544(CP000323|pid:none) Psychrobacter cryohalolentis K5,... 250 2e-64
CP000092_156(CP000092|pid:none) Ralstonia eutropha JMP134 megapl... 250 2e-64
CP000086_1248(CP000086|pid:none) Burkholderia thailandensis E264... 250 2e-64
CP000270_455(CP000270|pid:none) Burkholderia xenovorans LB400 ch... 250 2e-64
BX640430_207(BX640430|pid:none) Bordetella parapertussis strain ... 250 2e-64
AE017354_856(AE017354|pid:none) Legionella pneumophila subsp. pn... 250 2e-64
CP000675_966(CP000675|pid:none) Legionella pneumophila str. Corb... 249 3e-64
CP001349_202(CP001349|pid:none) Methylobacterium nodulans ORS 20... 249 3e-64
AP009380_1120(AP009380|pid:none) Porphyromonas gingivalis ATCC 3... 249 3e-64
CT971583_1629(CT971583|pid:none) Synechococcus WH7803 complete g... 249 4e-64
AM236080_4138(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 249 4e-64
EU333169_17(EU333169|pid:none) Uncultured bacterium pTW3 hypothe... 249 4e-64
CP000926_171(CP000926|pid:none) Pseudomonas putida GB-1, complet... 249 5e-64
CP000390_2775(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 249 5e-64
CP001392_3240(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 248 6e-64
CP000555_3562(CP000555|pid:none) Methylibium petroleiphilum PM1,... 248 6e-64
CP000249_2909(CP000249|pid:none) Frankia sp. CcI3, complete geno... 248 6e-64
CP000655_1788(CP000655|pid:none) Polynucleobacter necessarius su... 248 8e-64
CP001503_575(CP001503|pid:none) Burkholderia glumae BGR1 chromos... 248 1e-63
AE017197_816(AE017197|pid:none) Rickettsia typhi str. Wilmington... 248 1e-63
AM743169_809(AM743169|pid:none) Stenotrophomonas maltophilia K27... 248 1e-63
CP000316_4462(CP000316|pid:none) Polaromonas sp. JS666, complete... 247 1e-63
CP001635_393(CP001635|pid:none) Variovorax paradoxus S110 chromo... 247 2e-63
CP001010_1271(CP001010|pid:none) Polynucleobacter necessarius su... 247 2e-63
CP001191_3330(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 246 3e-63
CP000884_337(CP000884|pid:none) Delftia acidovorans SPH-1, compl... 245 5e-63
CP000529_3767(CP000529|pid:none) Polaromonas naphthalenivorans C... 245 5e-63
AM408590_191(AM408590|pid:none) Mycobacterium bovis BCG Pasteur ... 245 5e-63
CP001032_4559(CP001032|pid:none) Opitutus terrae PB90-1, complet... 245 7e-63
CP000699_1176(CP000699|pid:none) Sphingomonas wittichii RW1, com... 245 7e-63
CP000943_2960(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 244 9e-63
CP000084_572(CP000084|pid:none) Candidatus Pelagibacter ubique H... 244 9e-63
CP001074_3829(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 244 1e-62
CP001013_424(CP001013|pid:none) Leptothrix cholodnii SP-6, compl... 244 1e-62
CU914166_852(CU914166|pid:none) Ralstonia solanacearum strain IP... 244 1e-62
CP001298_2856(CP001298|pid:none) Methylobacterium chloromethanic... 244 1e-62
CP000697_2125(CP000697|pid:none) Acidiphilium cryptum JF-5, comp... 244 2e-62
CP000450_1155(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 244 2e-62
CP001614_790(CP001614|pid:none) Teredinibacter turnerae T7901, c... 244 2e-62
CP000697_2127(CP000697|pid:none) Acidiphilium cryptum JF-5, comp... 244 2e-62
AM236080_4136(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 243 3e-62
CP000133_3562(CP000133|pid:none) Rhizobium etli CFN 42, complete... 243 3e-62
BX294154_268(BX294154|pid:none) Rhodopirellula baltica SH 1 comp... 243 3e-62
CP001001_2755(CP001001|pid:none) Methylobacterium radiotolerans ... 243 3e-62
CP001111_700(CP001111|pid:none) Stenotrophomonas maltophilia R55... 243 3e-62
CP001281_1593(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 242 5e-62
CP000628_2939(CP000628|pid:none) Agrobacterium radiobacter K84 c... 241 1e-61
CP000356_962(CP000356|pid:none) Sphingopyxis alaskensis RB2256, ... 241 1e-61
CP000542_4652(CP000542|pid:none) Verminephrobacter eiseniae EF01... 240 2e-61
CP000774_2051(CP000774|pid:none) Parvibaculum lavamentivorans DS... 240 2e-61
AD3550(AD3550) NAD(P) transhydrogenase (AB-specific) (EC 1.6.1.2... 240 2e-61
CP000675_964(CP000675|pid:none) Legionella pneumophila str. Corb... 239 4e-61
AP008231_69(AP008231|pid:none) Synechococcus elongatus PCC 6301 ... 239 4e-61
CP000758_1371(CP000758|pid:none) Ochrobactrum anthropi ATCC 4918... 239 5e-61
(P0C188) RecName: Full=NAD(P) transhydrogenase subunit beta; ... 238 6e-61
AL954747_862(AL954747|pid:none) Nitrosomonas europaea ATCC 19718... 238 8e-61
AM039952_951(AM039952|pid:none) Xanthomonas campestris pv. vesic... 238 8e-61
L08393_1(L08393|pid:none) Eimeria tenella transhydrogenase mRNA,... 238 8e-61
CR628336_940(CR628336|pid:none) Legionella pneumophila str. Pari... 238 1e-60
AM778939_76(AM778939|pid:none) Microcystis aeruginosa PCC 7806 g... 238 1e-60
CR555306_2550(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 237 1e-60
AM910994_529(AM910994|pid:none) Plasmodium knowlesi strain H chr... 237 2e-60
CR628337_911(CR628337|pid:none) Legionella pneumophila str. Lens... 237 2e-60
CP000248_1834(CP000248|pid:none) Novosphingobium aromaticivorans... 236 2e-60
CP000863_573(CP000863|pid:none) Acinetobacter baumannii ACICU, c... 236 3e-60
CP001172_2934(CP001172|pid:none) Acinetobacter baumannii AB307-0... 236 3e-60
CP000282_956(CP000282|pid:none) Saccharophagus degradans 2-40, c... 236 3e-60
CP000323_542(CP000323|pid:none) Psychrobacter cryohalolentis K5,... 236 4e-60
AE006914_104(AE006914|pid:none) Rickettsia conorii str. Malish 7... 235 6e-60
CP001612_87(CP001612|pid:none) Rickettsia africae ESF-5, complet... 235 6e-60
BA000039_694(BA000039|pid:none) Thermosynechococcus elongatus BP... 235 6e-60
CP001291_4162(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 235 7e-60
CP000053_59(CP000053|pid:none) Rickettsia felis URRWXCal2, compl... 234 9e-60
CP000157_467(CP000157|pid:none) Erythrobacter litoralis HTCC2594... 234 9e-60
CP000454_4060(CP000454|pid:none) Arthrobacter sp. FB24, complete... 234 1e-59
CP000849_25(CP000849|pid:none) Rickettsia bellii OSU 85-389, com... 234 2e-59
CP000087_24(CP000087|pid:none) Rickettsia bellii RML369-C, compl... 234 2e-59
CP001287_2785(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 234 2e-59
CP000636_142(CP000636|pid:none) Agrobacterium vitis S4 plasmid p... 234 2e-59
AE013598_3564(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 232 5e-59
CP000806_840(CP000806|pid:none) Cyanothece sp. ATCC 51142 circul... 232 6e-59
CP000683_68(CP000683|pid:none) Rickettsia massiliae MTU5, comple... 231 8e-59
AM420293_5647(AM420293|pid:none) Saccharopolyspora erythraea NRR... 231 8e-59
AP008229_3435(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M... 230 2e-58
CP000951_969(CP000951|pid:none) Synechococcus sp. PCC 7002, comp... 229 3e-58
BX294154_266(BX294154|pid:none) Rhodopirellula baltica SH 1 comp... 229 4e-58
AJ235270_72(AJ235270|pid:none) Rickettsia prowazekii strain Madr... 228 7e-58
CP000393_4136(CP000393|pid:none) Trichodesmium erythraeum IMS101... 227 1e-57
CP001103_3866(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 227 2e-57
CP001339_264(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, c... 225 7e-57
AE010300_335(AE010300|pid:none) Leptospira interrogans serovar l... 224 1e-56
AM889285_341(AM889285|pid:none) Gluconacetobacter diazotrophicus... 223 3e-56
BX548174_1325(BX548174|pid:none) Prochlorococcus marinus MED4 co... 223 4e-56
CP001032_4557(CP001032|pid:none) Opitutus terrae PB90-1, complet... 223 4e-56
DQ366718_43(DQ366718|pid:none) Uncultured Prochlorococcus marinu... 221 8e-56
DQ366717_54(DQ366717|pid:none) Uncultured Prochlorococcus marinu... 221 8e-56
CP000576_1336(CP000576|pid:none) Prochlorococcus marinus str. MI... 221 8e-56
CP000552_1309(CP000552|pid:none) Prochlorococcus marinus str. MI... 221 1e-55
CP000769_2952(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 221 1e-55
CP001504_1874(CP001504|pid:none) Burkholderia glumae BGR1 chromo... 221 1e-55
CP000777_175(CP000777|pid:none) Leptospira biflexa serovar Patoc... 220 2e-55
CP000100_1608(CP000100|pid:none) Synechococcus elongatus PCC 794... 219 3e-55
AM286690_1327(AM286690|pid:none) Alcanivorax borkumensis SK2, co... 219 4e-55
AE013598_3559(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 218 7e-55
AP008229_3430(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M... 218 7e-55
CP000251_2999(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 218 9e-55
CP000097_680(CP000097|pid:none) Synechococcus sp. CC9902, comple... 217 2e-54
AP008231_67(AP008231|pid:none) Synechococcus elongatus PCC 6301 ... 217 2e-54
EU333168_32(EU333168|pid:none) Uncultured bacterium pTW2 RplA (r... 217 2e-54
CP001111_705(CP001111|pid:none) Stenotrophomonas maltophilia R55... 217 2e-54
CP000282_1274(CP000282|pid:none) Saccharophagus degradans 2-40, ... 215 6e-54
CT978603_358(CT978603|pid:none) Synechococcus sp. RCC307 genomic... 215 6e-54
CP000388_3623(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 215 6e-54
EU333169_12(EU333169|pid:none) Uncultured bacterium pTW3 hypothe... 214 1e-53
CP000473_3330(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 214 1e-53
CP000472_809(CP000472|pid:none) Shewanella piezotolerans WP3, co... 214 1e-53
AM039952_955(AM039952|pid:none) Xanthomonas campestris pv. vesic... 214 1e-53
DQ362127_1(DQ362127|pid:none) Shigella flexneri strain 580 PntB ... 214 1e-53
AM743169_814(AM743169|pid:none) Stenotrophomonas maltophilia K27... 214 1e-53
CU458896_4543(CU458896|pid:none) Mycobacterium abscessus chromos... 214 2e-53
DQ362164_1(DQ362164|pid:none) Shigella boydii strain G1226 PntB ... 214 2e-53
AE008923_920(AE008923|pid:none) Xanthomonas axonopodis pv. citri... 213 2e-53
CP000159_2151(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 213 2e-53
CP000083_3916(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 213 2e-53
CP000606_661(CP000606|pid:none) Shewanella loihica PV-4, complet... 213 3e-53
AP006618_1022(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 213 3e-53
AP008957_3997(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 213 3e-53
CP000453_2750(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-... 213 3e-53
CP000851_648(CP000851|pid:none) Shewanella pealeana ATCC 700345,... 212 7e-53
CP000431_1558(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 212 7e-53
AP008226_208(AP008226|pid:none) Thermus thermophilus HB8 genomic... 211 1e-52
AE017221_1772(AE017221|pid:none) Thermus thermophilus HB27, comp... 211 1e-52
CP000553_1587(CP000553|pid:none) Prochlorococcus marinus str. NA... 210 2e-52
DQ362153_1(DQ362153|pid:none) Shigella boydii strain G1214 PntB ... 210 2e-52
CP000479_4954(CP000479|pid:none) Mycobacterium avium 104, comple... 210 2e-52
AP011115_1284(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 210 2e-52
AP009256_725(AP009256|pid:none) Bifidobacterium adolescentis ATC... 209 3e-52
CR555306_2552(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 209 4e-52
CP000854_375(CP000854|pid:none) Mycobacterium marinum M, complet... 209 6e-52
BX548175_1517(BX548175|pid:none) Prochlorococcus marinus MIT9313... 208 7e-52
CP000554_857(CP000554|pid:none) Prochlorococcus marinus str. MIT... 207 1e-51
CP001095_1522(CP001095|pid:none) Bifidobacterium longum subsp. i... 207 2e-51
CP001213_1395(CP001213|pid:none) Bifidobacterium animalis subsp.... 206 4e-51

>CP000828_4238(CP000828|pid:none) Acaryochloris marina MBIC11017,
complete genome.
Length = 538

Score = 427 bits (1097), Expect = e-117
Identities = 217/379 (57%), Positives = 276/379 (72%), Gaps = 1/379 (0%)
Frame = +2

Query: 1355 PFEQLTIGIPTEVYQNEKRVSMTPENXXXXXXXXXXXXXXXXAGKGAKFSDAKYIEAGAK 1534
P L IGIP EV+ E+RV+ TP+ AG GA FSD Y +AG +
Sbjct: 17 PKTGLKIGIPKEVFPGERRVAATPDTAKTLQKMGFEVLVESKAGAGATFSDQVYQQAGCQ 76

Query: 1535 ITT-AANLFKKTDILLKVRGPQFNTNLGKHEVEMMKEGATVISFLSPAQNAETLKLLSQK 1711
+ L++ DI+LKVR PQ + L +HE E++ EG T+ISF+ PAQN + LK L+++
Sbjct: 77 VVADTTQLWETADIILKVRAPQMHPTLNRHEAELLNEGKTLISFIWPAQNEDLLKQLAEQ 136

Query: 1712 KANAIAVDCIPRISRAQVFDGLSSMANIAGYKAVMEASNYFGRFFGGAITAAGRVQPAKV 1891
KAN +A+D IPRISRAQ D LSSMANIAGY+AV+E++N FGRFF G ITAAG+V PAKV
Sbjct: 137 KANVLAMDAIPRISRAQKMDALSSMANIAGYRAVVESANNFGRFFTGQITAAGKVPPAKV 196

Query: 1892 LVIGAGVAGLSAIGTAKNIGAIVRAFDTRSVTKEQVESLGGEFLEVKIKESGEGSGGYAK 2071
LVIGAGVAGL+AIG A+ +GA+VR+FDTR V KEQV+S+G EFLE++ +E G G+GGYAK
Sbjct: 197 LVIGAGVAGLAAIGAARGLGAVVRSFDTRPVVKEQVQSMGAEFLELEFEEDGTGAGGYAK 256

Query: 2072 HMSKEYIEAEMALFERQCKEVDIVITTALIPGVPAPKLITKQMVDQMKPGSVIVDLAAET 2251
MS E+I AEM LF +Q +EVDI+ITTALIPG AP LITK MV+ MK GSV+VD+AAE
Sbjct: 257 TMSPEFIAAEMELFAQQAEEVDIIITTALIPGKKAPLLITKDMVESMKEGSVVVDMAAEQ 316

Query: 2252 GGNCELTKPGEAYNYNGVSIIGFTDLPSKMATQSSTLYSNNIAKFLLSLGNDKDGFKLDF 2431
GGNCE+T+P E Y ++GV+I+G TDLPS+MA QSS LY NN+ L +G +D +K+DF
Sbjct: 317 GGNCEVTRPNEVYQHHGVTIVGLTDLPSRMANQSSQLYGNNLCHLLKDMGGAED-YKIDF 375

Query: 2432 TDEVHRGSTVTYNGTLIWP 2488
DEV RG+TV G + WP
Sbjct: 376 EDEVVRGATVLQEGKITWP 394

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 3,612,860,457
Number of extensions: 69703084
Number of successful extensions: 197197
Number of sequences better than 10.0: 869
Number of HSP's gapped: 195215
Number of HSP's successfully gapped: 915
Length of query: 888
Length of database: 1,051,180,864
Length adjustment: 138
Effective length of query: 750
Effective length of database: 604,535,722
Effective search space: 453401791500
Effective search space used: 453401791500
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.78 gvh: 0.36 alm: 0.30 top: 0.53 tms: 0.07 mit: 0.41 mip: 0.10
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.05 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 1.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

24.0 %: mitochondrial
24.0 %: endoplasmic reticulum
20.0 %: cytoplasmic
12.0 %: nuclear
8.0 %: Golgi
8.0 %: plasma membrane
4.0 %: vesicles of secretory system

>> prediction for Contig-U12088-1 is mit

VS (DIR, S) 0
VH (FL, L) 19
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 1
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0