Contig-U12068-1
Contig ID Contig-U12068-1
Contig update 2002.12.18
Contig sequence
>Contig-U12068-1 (Contig-U12068-1Q) /CSM_Contig/Contig-U12068-1Q.Seq.d
AAAAGAAGAAAAGAATTATTAGATAGATTTAATAATGATGACGATAGTAA
TAATGATAATTATAATGATAATGATGAATCTTCATTCAAAAAACCTGAAA
AACATTATAGACAGATAAAATCAACACCAATTCGTTCAAATGATTATGAA
AGAAATTCTTCTTCTTCTTCTTCATCATCATATGATAGACGAGATGATAG
GAGCAGTAATAGAGATGATTATAGAAGAGATGATAGAAGTAGTAATAGAG
ATGATTATAGAAGAGATGATAGAAGTGGTAGTAGTAATAGGAGAGATGAT
TATAGAAGGGATGATAAAAGTAGTAGTAGTAGTAGTAATAGGGATGATTA
TAGAAGGGATGATAGAAGTAGCAATAGAGAAGATTATAAAAGAGATGACA
GAAGTTCATCATATAGGAGAGGTGAGGATTTTAATAAAAACTCTGAAACT
CCACAAAGAAGATATAATGATCAAACACCATCAAGAGATTCAAATAGAGA
TCCATCATATAAAAGGGACGATAGAAGTATAAATAGAAATGATTATAGAA
AAGGTGATATCGATAGAGGTGGTGGTGATAATAGACCTTTTGATACACCT
CAAAGAAATAGAGATAATGATCAAACACCAAGTAGATATAATCAACANNN
NNNNNN----------NNNNNNNNNNATTGGATTTTGATTTTATGGATCC
ACCACCACAAGATAATATTTTGAATTCAATGTATCAACTTTGGGTATTGG
GAGCATTGGATGATCAAGGTCAAATCACACCATTGGGTAAGAGAATGTCG
GAATTTCCATTGGATCCACCACTATCGAAAATGGTTATAGTTGCAGAGCA
ATTGGGGTGTGGTCAAGATATAGTTACAATCGTTAGTATGTTATCAATGC
CATCAGTTTTCTATAGACCTAAAGGTGCTGAAGAAGAGAGTGATGCCTCA
AGAGAGAAATTCTTTGTTCCAGAATCCGATCATCTAACATTGTTACATGT
TTATCAACAATGGAAAATCAACAACTATAGCTCACAATGGTGTGCTGAAC
ATTATATTCACATTAAAGCAATGAGAAAAGTTAGAGAGGTTCGTGGTCAA
CTCTTGGATATTATGGTACAACATGATATGAAGGTTGAATCATGTGGTTC
AAATTGGGATATCATTAGAAAGGCTATCACTTCTTCTTACTTTCATCATT
CTGCAAAGATTAAAGGTATTGGTGAATATGTAAACATGAGAAATGGTATG
CCATGTTTCCTTCATCCAACAAGTGCACTCTATGGTCTTGGTTATGCTCC
CGACTATATTGTCTACCATGAATTAGTTATGACCTCAAAAGAATATATGC
AAATTGTAACCGCTGTTGACCCAAATTGGTTAGCNAAAGGGTCCAAGTTT
TTCTCAATCAAAAAATCATAAAAG

Gap gap included
Contig length 1414
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 3869587
End point 3868188
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 2
Link to clone list U12068
List of clone(s)

est1=SHD805F,1,647
est2=SHD805Z,648,1396
Translated Amino Acid sequence
KRRKELLDRFNNDDDSNNDNYNDNDESSFKKPEKHYRQIKSTPIRSNDYERNSSSSSSSS
YDRRDDRSSNRDDYRRDDRSSNRDDYRRDDRSGSSNRRDDYRRDDKSSSSSSNRDDYRRD
DRSSNREDYKRDDRSSSYRRGEDFNKNSETPQRRYNDQTPSRDSNRDPSYKRDDRSINRN
DYRKGDIDRGGGDNRPFDTPQRNRDNDQTPSRYNQXXX---

---XXXLDFDFMDPPPQDNILNSMYQLWVLGALDDQGQITPLGKRMSEFPLDPPLSKMVI
VAEQLGCGQDIVTIVSMLSMPSVFYRPKGAEEESDASREKFFVPESDHLTLLHVYQQWKI
NNYSSQWCAEHYIHIKAMRKVREVRGQLLDIMVQHDMKVESCGSNWDIIRKAITSSYFHH
SAKIKGIGEYVNMRNGMPCFLHPTSALYGLGYAPDYIVYHELVMTSKEYMQIVTAVDPNW
LAKGSKFFSIKKS*k


Translated Amino Acid sequence (All Frames)
Frame A:
KRRKELLDRFNNDDDSNNDNYNDNDESSFKKPEKHYRQIKSTPIRSNDYERNSSSSSSSS
YDRRDDRSSNRDDYRRDDRSSNRDDYRRDDRSGSSNRRDDYRRDDKSSSSSSNRDDYRRD
DRSSNREDYKRDDRSSSYRRGEDFNKNSETPQRRYNDQTPSRDSNRDPSYKRDDRSINRN
DYRKGDIDRGGGDNRPFDTPQRNRDNDQTPSRYNQXXX---

---xxxxwililwihhhkiif*iqcinfgywehwmikvkshhwvrecrnfhwihhyrkwl
*lqsnwgvvki*lqslvcyqchqfsidlkvlkkrvmpqernslfqnpii*hcymfinngk
sttiahngvlniiftlkq*eklerfvvnswilwynmi*rlnhvvqigislerlsllltfi
ilqrlkvlvnm*t*emvchvsfiqqvhsmvlvmlptilstmn*l*pqknickl*plltqi
g*xkgpsfsqsknhk

Frame B:
keekny*idlimmtivimiiimimmnlhsknlkniidr*nqhqfvqmimkeilllllhhh
midemigaviemiieemievviemiieemievvvvigemiiegmikvvvvvvigmiiegm
ievaiekiikemtevhhigevriliktlklhkedimikhhqeiqieihhikgtiev*iem
iiekvisievvviidllihlkeieimikhqvdiinxxx---

---xxxigf*fygstttr*yfefnvstlgigsig*srsnhtig*envgisigsttiengy
scraigvwsrysynr*yvinaisfl*t*rc*rre*clkreilcsrirssnivtclstmen
qql*ltmvc*tlysh*sneks*rgswstlgyygtt*yeg*imwfklgyh*kgyhffllss
fckd*ryw*ickhekwyamfpssnkctlwswlcsrlyclp*isydlkriyancnrc*pkl
vsxrvqvflnqkiik

Frame C:
kkkriir*i****r*****l*****ifiqkt*ktl*tdkintnsfk*l*kkffffffiii
**tr**eq**r*l*kr**k***r*l*kr**kw****er*l*kg**k*******g*l*kg*
*k*q*rrl*kr*qkfii*er*gf**kl*nstkki**sntikrfk*rsii*kgr*kyk*k*
l*kr*yr*rww***tf*ytskk*r**sntk*i*stxxx---

---XXXLDFDFMDPPPQDNILNSMYQLWVLGALDDQGQITPLGKRMSEFPLDPPLSKMVI
VAEQLGCGQDIVTIVSMLSMPSVFYRPKGAEEESDASREKFFVPESDHLTLLHVYQQWKI
NNYSSQWCAEHYIHIKAMRKVREVRGQLLDIMVQHDMKVESCGSNWDIIRKAITSSYFHH
SAKIKGIGEYVNMRNGMPCFLHPTSALYGLGYAPDYIVYHELVMTSKEYMQIVTAVDPNW
LAKGSKFFSIKKS*k

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U12068-1 (Contig-U12068-1Q)
/CSM_Contig/Contig-U12068-1Q.Seq.d
(1424 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U12068-1 (Contig-U12068-1Q) /CSM_Contig/Conti... 1477 0.0
Contig-U12260-1 (Contig-U12260-1Q) /CSM_Contig/Conti... 48 3e-05
Contig-U11812-1 (Contig-U11812-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U08887-1 (Contig-U08887-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U06862-1 (Contig-U06862-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U03836-1 (Contig-U03836-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U11141-1 (Contig-U11141-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U09374-1 (Contig-U09374-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U06360-1 (Contig-U06360-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U13880-1 (Contig-U13880-1Q) /CSM_Contig/Conti... 40 0.006

>Contig-U12068-1 (Contig-U12068-1Q) /CSM_Contig/Contig-U12068-1Q.Seq.d
Length = 1424

Score = 1477 bits (745), Expect = 0.0
Identities = 748/748 (100%)
Strand = Plus / Plus


Query: 677 attggattttgattttatggatccaccaccacaagataatattttgaattcaatgtatca 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 attggattttgattttatggatccaccaccacaagataatattttgaattcaatgtatca 736


Query: 737 actttgggtattgggagcattggatgatcaaggtcaaatcacaccattgggtaagagaat 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 actttgggtattgggagcattggatgatcaaggtcaaatcacaccattgggtaagagaat 796


Query: 797 gtcggaatttccattggatccaccactatcgaaaatggttatagttgcagagcaattggg 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 gtcggaatttccattggatccaccactatcgaaaatggttatagttgcagagcaattggg 856


Query: 857 gtgtggtcaagatatagttacaatcgttagtatgttatcaatgccatcagttttctatag 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 gtgtggtcaagatatagttacaatcgttagtatgttatcaatgccatcagttttctatag 916


Query: 917 acctaaaggtgctgaagaagagagtgatgcctcaagagagaaattctttgttccagaatc 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 acctaaaggtgctgaagaagagagtgatgcctcaagagagaaattctttgttccagaatc 976


Query: 977 cgatcatctaacattgttacatgtttatcaacaatggaaaatcaacaactatagctcaca 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 cgatcatctaacattgttacatgtttatcaacaatggaaaatcaacaactatagctcaca 1036


Query: 1037 atggtgtgctgaacattatattcacattaaagcaatgagaaaagttagagaggttcgtgg 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 atggtgtgctgaacattatattcacattaaagcaatgagaaaagttagagaggttcgtgg 1096


Query: 1097 tcaactcttggatattatggtacaacatgatatgaaggttgaatcatgtggttcaaattg 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 tcaactcttggatattatggtacaacatgatatgaaggttgaatcatgtggttcaaattg 1156


Query: 1157 ggatatcattagaaaggctatcacttcttcttactttcatcattctgcaaagattaaagg 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1157 ggatatcattagaaaggctatcacttcttcttactttcatcattctgcaaagattaaagg 1216


Query: 1217 tattggtgaatatgtaaacatgagaaatggtatgccatgtttccttcatccaacaagtgc 1276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1217 tattggtgaatatgtaaacatgagaaatggtatgccatgtttccttcatccaacaagtgc 1276


Query: 1277 actctatggtcttggttatgctcccgactatattgtctaccatgaattagttatgacctc 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1277 actctatggtcttggttatgctcccgactatattgtctaccatgaattagttatgacctc 1336


Query: 1337 aaaagaatatatgcaaattgtaaccgctgttgacccaaattggttagcnaaagggtccaa 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1337 aaaagaatatatgcaaattgtaaccgctgttgacccaaattggttagcnaaagggtccaa 1396


Query: 1397 gtttttctcaatcaaaaaatcataaaag 1424
||||||||||||||||||||||||||||
Sbjct: 1397 gtttttctcaatcaaaaaatcataaaag 1424


Score = 615 bits (310), Expect = e-176
Identities = 310/310 (100%)
Strand = Plus / Plus


Query: 338 atagggatgattatagaagggatgatagaagtagcaatagagaagattataaaagagatg 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 atagggatgattatagaagggatgatagaagtagcaatagagaagattataaaagagatg 397


Query: 398 acagaagttcatcatataggagaggtgaggattttaataaaaactctgaaactccacaaa 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 acagaagttcatcatataggagaggtgaggattttaataaaaactctgaaactccacaaa 457


Query: 458 gaagatataatgatcaaacaccatcaagagattcaaatagagatccatcatataaaaggg 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gaagatataatgatcaaacaccatcaagagattcaaatagagatccatcatataaaaggg 517


Query: 518 acgatagaagtataaatagaaatgattatagaaaaggtgatatcgatagaggtggtggtg 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 acgatagaagtataaatagaaatgattatagaaaaggtgatatcgatagaggtggtggtg 577


Query: 578 ataatagaccttttgatacacctcaaagaaatagagataatgatcaaacaccaagtagat 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ataatagaccttttgatacacctcaaagaaatagagataatgatcaaacaccaagtagat 637


Query: 638 ataatcaaca 647
||||||||||
Sbjct: 638 ataatcaaca 647


Score = 307 bits (155), Expect = 2e-83
Identities = 155/155 (100%)
Strand = Plus / Plus


Query: 1 aaaagaagaaaagaattattagatagatttaataatgatgacgatagtaataatgataat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaagaagaaaagaattattagatagatttaataatgatgacgatagtaataatgataat 60


Query: 61 tataatgataatgatgaatcttcattcaaaaaacctgaaaaacattatagacagataaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tataatgataatgatgaatcttcattcaaaaaacctgaaaaacattatagacagataaaa 120


Query: 121 tcaacaccaattcgttcaaatgattatgaaagaaa 155
|||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaacaccaattcgttcaaatgattatgaaagaaa 155


Score = 287 bits (145), Expect = 2e-77
Identities = 145/145 (100%)
Strand = Plus / Plus


Query: 174 atcatcatatgatagacgagatgataggagcagtaatagagatgattatagaagagatga 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 atcatcatatgatagacgagatgataggagcagtaatagagatgattatagaagagatga 233


Query: 234 tagaagtagtaatagagatgattatagaagagatgatagaagtggtagtagtaataggag 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 tagaagtagtaatagagatgattatagaagagatgatagaagtggtagtagtaataggag 293


Query: 294 agatgattatagaagggatgataaa 318
|||||||||||||||||||||||||
Sbjct: 294 agatgattatagaagggatgataaa 318


Score = 113 bits (57), Expect = 5e-25
Identities = 123/144 (85%), Gaps = 12/144 (8%)
Strand = Plus / Plus


Query: 185 atagacgagatgataggagcagtaatagagatgattatagaagagatgatagaagt---- 240
||||| |||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 221 atagaagagatgatagaagtagtaatagagatgattatagaagagatgatagaagtggta 280


Query: 241 --agtaatag---agatgattatagaagagatgatagaagtggtagtagtaatag---ga 292
|||||||| ||||||||||||||| ||||||| |||| ||||||||| ||| |
Sbjct: 281 gtagtaataggagagatgattatagaagggatgataaaagtagtagtagtagtagtaata 340


Query: 293 gagatgattatagaagggatgata 316
| ||||||||||||||||||||||
Sbjct: 341 gggatgattatagaagggatgata 364


Score = 95.6 bits (48), Expect = 1e-19
Identities = 66/72 (91%)
Strand = Plus / Plus


Query: 205 agtaatagagatgattatagaagagatgatagaagtagtaatagagatgattatagaaga 264
|||||||| |||||||||||||| |||||||||||||| |||||||| ||||||| ||||
Sbjct: 334 agtaatagggatgattatagaagggatgatagaagtagcaatagagaagattataaaaga 393


Query: 265 gatgatagaagt 276
||||| ||||||
Sbjct: 394 gatgacagaagt 405


Score = 87.7 bits (44), Expect = 3e-17
Identities = 62/68 (91%)
Strand = Plus / Plus


Query: 338 atagggatgattatagaagggatgatagaagtagcaatagagaagattataaaagagatg 397
|||| |||||||||||||| |||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 209 atagagatgattatagaagagatgatagaagtagtaatagagatgattatagaagagatg 268


Query: 398 acagaagt 405
| ||||||
Sbjct: 269 atagaagt 276


Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus


Query: 238 agtagtaatagagatgattatagaagagatgatagaagt 276
||||||||||| |||||||||||||| ||||||||||||
Sbjct: 331 agtagtaatagggatgattatagaagggatgatagaagt 369


Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus


Query: 343 gatgattatagaagggatgatagaagtag 371
|||||||||||||||||||||| ||||||
Sbjct: 295 gatgattatagaagggatgataaaagtag 323


Score = 40.1 bits (20), Expect = 0.006
Identities = 35/40 (87%)
Strand = Plus / Plus


Query: 520 gatagaagtataaatagaaatgattatagaaaaggtgata 559
|||||||||| |||||| |||||||||||| || |||||
Sbjct: 232 gatagaagtagtaatagagatgattatagaagagatgata 271


Score = 40.1 bits (20), Expect = 0.006
Identities = 35/40 (87%)
Strand = Plus / Plus


Query: 232 gatagaagtagtaatagagatgattatagaagagatgata 271
|||||||||| |||||| |||||||||||| || |||||
Sbjct: 520 gatagaagtataaatagaaatgattatagaaaaggtgata 559


Score = 32.2 bits (16), Expect = 1.6
Identities = 25/28 (89%)
Strand = Plus / Plus


Query: 532 aatagaaatgattatagaaaaggtgata 559
|||||| |||||||||||| || |||||
Sbjct: 208 aatagagatgattatagaagagatgata 235


Score = 32.2 bits (16), Expect = 1.6
Identities = 25/28 (89%)
Strand = Plus / Plus


Query: 208 aatagagatgattatagaagagatgata 235
|||||| |||||||||||| || |||||
Sbjct: 532 aatagaaatgattatagaaaaggtgata 559


>Contig-U12260-1 (Contig-U12260-1Q) /CSM_Contig/Contig-U12260-1Q.Seq.d
Length = 1262

Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus


Query: 50 ataatgataattataatgataatgatga 77
||||||||||| ||||||||||||||||
Sbjct: 765 ataatgataatgataatgataatgatga 792


Score = 40.1 bits (20), Expect = 0.006
Identities = 23/24 (95%)
Strand = Plus / Plus


Query: 52 aatgataattataatgataatgat 75
||||||||| ||||||||||||||
Sbjct: 761 aatgataatgataatgataatgat 784


Score = 32.2 bits (16), Expect = 1.6
Identities = 25/28 (89%)
Strand = Plus / Plus


Query: 48 taataatgataattataatgataatgat 75
||||||| | ||| ||||||||||||||
Sbjct: 751 taataataaaaatgataatgataatgat 778


Score = 30.2 bits (15), Expect = 6.2
Identities = 24/27 (88%)
Strand = Plus / Plus


Query: 49 aataatgataattataatgataatgat 75
|||||| ||||| | ||||||||||||
Sbjct: 746 aataataataataaaaatgataatgat 772


>Contig-U11812-1 (Contig-U11812-1Q) /CSM_Contig/Contig-U11812-1Q.Seq.d
Length = 1354

Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus


Query: 48 taataatgataattataatgataatgatgaa 78
|||||||||| || |||||||||||||||||
Sbjct: 756 taataatgatgatgataatgataatgatgaa 786


Score = 32.2 bits (16), Expect = 1.6
Identities = 25/28 (89%)
Strand = Plus / Plus


Query: 30 taataatgatgacgatagtaataatgat 57
|||||||||||| |||| | ||||||||
Sbjct: 756 taataatgatgatgataatgataatgat 783


Score = 32.2 bits (16), Expect = 1.6
Identities = 25/28 (89%)
Strand = Plus / Plus


Query: 48 taataatgataattataatgataatgat 75
||||||| ||||| || |||||||||||
Sbjct: 750 taataataataatgatgatgataatgat 777


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,192
Number of Sequences: 6905
Number of extensions: 16192
Number of successful extensions: 2417
Number of sequences better than 10.0: 441
length of query: 1424
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1408
effective length of database: 5,564,391
effective search space: 7834662528
effective search space used: 7834662528
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.29
Homology vs DNA
Query= Contig-U12068-1 (Contig-U12068-1Q) /CSM_Contig/Contig-U12068-1Q.Seq.d
(1424 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ405265) Dictyostelium discoideum cDNA clone:dds31j02, 3' ... 1477 0.0 1
(AF012942) Dictyostelium discoideum HelD (helD) gene, partia... 1403 0.0 2
(BJ393377) Dictyostelium discoideum cDNA clone:dds31j02, 5' ... 615 0.0 5
(EX379938) GQ03301.B7_I15 GQ033 - Terminal leader (Normalize... 74 9e-14 3
(EW746054) sb_005_07H17_m13reverselong Onychiurus arcticus c... 72 2e-13 3
(BX682241) Pinus pinaster xylem EST, clone 114A03 similar to... 90 3e-13 1
(CD080779) MA3-9999U-M314-H04-U.B MA3-0001 Schistosoma manso... 60 2e-12 4
(DR485639) WS02818.C21_O01 SS-IB-A-FL-13 Picea sitchensis cD... 82 7e-11 1
(EX440985) GQ04101.B7_M01 GQ041 - Shoot tip - Dormant (Norma... 82 7e-11 1
(AF120269) Caenorhabditis elegans sex determination protein ... 54 1e-10 4
(FF562214) MUSRI57TF MUSR Musa acuminata cDNA 5', mRNA seque... 46 8e-10 3
(AK073417) Oryza sativa Japonica Group cDNA clone:J033041J24... 58 1e-09 3
(CB662096) OSJNEd05M15.f OSJNEd Oryza sativa Japonica Group ... 58 2e-09 2
(EL428559) CHCM7824.b1_P11.ab1 CHC(LMS) Texas blueweed Helia... 58 3e-09 3
(FE246106) CAPG9244.fwd CAPG Naegleria gruberi amoeba stage ... 44 3e-09 3
(AP009632) Lotus japonicus genomic DNA, chromosome 3, clone:... 70 1e-08 4
(CD137017) MG1-0046U-A266-G09-U.B MG1-0046 Schistosoma manso... 60 1e-08 3
(Z29560) Caenorhabditis elegans Cosmid K03H1. 54 4e-08 5
(FF477914) G613P6183RC5.T0 Acorn worm blastula/gastrula pCMV... 62 8e-08 2
(AW719858) LjNEST11b4r Lotus japonicus nodule library 5 and ... 70 3e-07 1
(CB330738) SpEST699 Sweetpotato cDNA library Ipomoea batatas... 56 4e-07 3
(AP003809) Oryza sativa Japonica Group genomic DNA, chromoso... 58 5e-07 5
(DT554390) EST1065030 GH_TMO Gossypium hirsutum cDNA, mRNA s... 52 6e-07 2
(EX927698) ll04d07.g7 Cycas ovule - normalized (NYBG) Cycas ... 68 1e-06 1
(AP003815) Oryza sativa Japonica Group genomic DNA, chromoso... 58 2e-06 5
(AP004335) Oryza sativa Japonica Group genomic DNA, chromoso... 58 3e-06 4
(EA696411) Sequence 75290 from patent US 7365185. 58 3e-06 5
(CT802934) Paramecium tetraurelia 5-PRIME EST from clone LK0... 42 7e-06 4
(DT935724) BAAC-PNP1281P17.g1 C.remanei EST SB146 Caenorhabd... 38 8e-06 4
(DV175378) CV04002X1H07.f1 CV04-normalized library Cirsium a... 42 2e-05 3
(BQ579922) ACB13-jm11.c01 onion bulb meristem library Allium... 56 2e-05 2
(DT585577) ltu01-29ms1-e11 Ltu01 Liriodendron tulipifera cDN... 62 2e-05 2
(DY888274) CeleSEQ5091 Cunninghamella elegans pBluescript (E... 38 4e-05 3
(CK240610) rx11c10.y1 Meloidogyne paranaensis egg SMART pGEM... 48 5e-05 3
(DY262933) IC0AAA10BE02RM1 CitNFL Citrus clementina cDNA 5',... 62 6e-05 1
(CD078511) MA3-9999U-L239-B09-U.G MA3-0001 Schistosoma manso... 60 8e-05 2
(AC229682) Solanum lycopersicum chromosome 12 clone LE_HBa-7... 60 2e-04 1
(AC229681) Solanum lycopersicum chromosome 12 clone LE_HBa-6... 60 2e-04 1
(AC229679) Solanum lycopersicum chromosome 12 clone LE_HBa-5... 60 2e-04 1
(DV124000) CV03038A1B09.f1 CV03-normalized library Euphorbia... 60 2e-04 1
(BI993566) 01507 leafy spurge Lambda HybriZAP 2.1 two-hybrid... 60 2e-04 1
(DY605244) IMMUNEF045825I9 POSSUM_01-C-POSSUM-IMMUNE-2KB Tri... 42 5e-04 2
(CU357897) Aphanomyces euteiches cDNA. 42 9e-04 2
(CU355934) Aphanomyces euteiches cDNA. 42 9e-04 2
(AP008213) Oryza sativa (japonica cultivar-group) genomic DN... 58 0.001 1
(AQ509462) nbxb0096G22f CUGI Rice BAC Library Oryza sativa J... 58 0.001 1
(FG986794) GLLBY83TF JCVI-SOY1 Glycine max cDNA 5', mRNA seq... 58 0.001 1
(AW781300) sk68a12.y1 Gm-c1016 Glycine max cDNA clone GENOME... 58 0.001 1
(FC585600) CAXP3194.rev CAXP Lottia gigantea from head, foot... 56 0.001 2
(CB282897) BT1165 Blomia tropicalis cDNA library Blomia trop... 38 0.002 3
(CK240609) rx11c09.y1 Meloidogyne paranaensis egg SMART pGEM... 48 0.002 3
(FE683842) Pv014A_M13F_A06.ab1 Phaseolus vulgaris cv Early g... 42 0.003 3
(BJ133101) Caenorhabditis elegans cDNA clone:yk1073e02 : 3' ... 36 0.003 3
(BJ813134) Caenorhabditis elegans cDNA clone:yk1475f07 : 3' ... 36 0.004 3
(EA380724) Sequence 29547 from patent US 7314974. 36 0.004 3
(EG661732) RCLE436TP Castor bean cDNA library from leaves, 1... 56 0.004 1
(DV954449) SB03029A2G06.f1 Normalized subtracted Keck-Tagu L... 56 0.004 1
(CK310688) SB02006B2C06.f1 normalized Keck-Tagu Library SB02... 56 0.004 1
(CK310625) SB02006B1F09.f1 normalized Keck-Tagu Library SB02... 56 0.004 1
(CK234959) SB010014000F09 JUWNL1 Normalized Zebra Finch Juve... 56 0.004 1
(BM139987) Gm-R2-7H Soybean root reverse subtractive cDNA Li... 56 0.004 1
(FE714478) SB03060A2C09.f1 Normalized subtracted Keck-Tagu L... 56 0.004 1
(BJ132638) Caenorhabditis elegans cDNA clone:yk1068c04 : 3' ... 36 0.004 3
(EC304066) OVARYF089471D3 POSSUM_01-POSSUM-C-OVARY-2KB Trich... 42 0.005 2
(EC305714) OVARYF088534J5 POSSUM_01-POSSUM-C-OVARY-2KB Trich... 42 0.006 2
(EC360334) IMMUNEF088889K5 POSSUM_01-C-POSSUM-IMMUNE-2KB Tri... 42 0.006 2
(EC360517) IMMUNEF088902M2 POSSUM_01-C-POSSUM-IMMUNE-2KB Tri... 42 0.007 2
(CF279975) 14ETL--06-H16.b1 Rice etiolated leaf plasmid cDNA... 44 0.013 2
(CI270883) Oryza sativa Japonica Group cDNA, clone: 074-M140... 44 0.013 2
(CI139799) Oryza sativa Japonica Group cDNA, clone: 027-M106... 44 0.013 2
(CI138373) Oryza sativa Japonica Group cDNA, clone: 027-M070... 44 0.013 2
(CD074702) MA3-0001U-M314-H04-U.B MA3-0001 Schistosoma manso... 52 0.015 2
(AK248124) Dugesia japonica mRNA for DEAD box protein, parti... 38 0.022 3
(EL566050) Physarum01147 Physarum polycephalum starvation st... 38 0.045 3
(DY526908) BAAC-PNP1298C21.g2 C.remanei EST SB146 Caenorhabd... 38 0.045 3
(DT934480) BAAC-PNP1278C16.g1 C.remanei EST SB146 Caenorhabd... 38 0.047 2
(DV149667) CV03080B1D02.f1 CV03-normalized library Euphorbia... 52 0.059 1
(CO538639) tah74b12.y1 Hydra EST UCI 5 Hydra magnipapillata ... 52 0.059 1
(AM047972) Schistosoma mansoni lung schistosomulum EST, clon... 52 0.059 1
(BJ855691) Marchantia polymorpha cDNA clone:lwa4m11, 5' end. 52 0.059 1
(EX691554) SC_AW107951d03 AW1 Schistosoma mansoni cDNA clone... 52 0.059 1
(EX511819) RR_EG1108A51e03.esd.z EG1 Schistosoma mansoni cDN... 52 0.059 1
(EL578891) Physarum07000 Physarum polycephalum starvation st... 38 0.061 3
(ES826888) UFL_368_41 Cotton fiber 0-10 day post anthesis Go... 42 0.11 2
(ET164010) CP02-S2-000-123-H09-CL.G WGS1 Moniliophthora pern... 42 0.13 3
(ET164009) CP02-S2-000-123-H09-CL.F WGS1 Moniliophthora pern... 42 0.13 3
(BW286058) Ciona intestinalis cDNA, clone:cigd029n12, 5' end... 42 0.13 3
(BW285144) Ciona intestinalis cDNA, clone:cigd027a12, 5' end... 42 0.14 3
(BG133918) EST466810 tomato crown gall Solanum lycopersicum ... 38 0.15 2
(AW650032) EST328486 tomato germinating seedlings, TAMU Sola... 38 0.17 2
(CD072980) MA3-0001U-L239-B09-U.B MA3-0001 Schistosoma manso... 48 0.17 2
(BJ155561) Caenorhabditis elegans cDNA clone:yk1343f10 : 3' ... 36 0.18 2
(BJ127195) Caenorhabditis elegans cDNA clone:yk1343f10 : 5' ... 36 0.18 2
(BG649761) RHIZ2_83_C09.b1_A003 Rhizome2 (RHIZ2) Sorghum pro... 46 0.19 2
(BP187495) Dugesia japonica cDNA, clone: 00354_HN, expressed... 38 0.19 2
(AV916017) Hordeum vulgare subsp. vulgare cv.Haruna Nijo cDN... 46 0.22 2
(BU989268) HF21E06r HF Hordeum vulgare subsp. vulgare cDNA c... 46 0.22 2
(EH695956) CCIM7765.b1_I21.ab1 CCI(LMS) chicory Cichorium in... 50 0.23 1
(DR030161) bda020210A06.ab1_016 Antrodia cinnamomea cDNA Lib... 50 0.23 1
(FC585601) CAXP3194.fwd CAXP Lottia gigantea from head, foot... 50 0.23 1

>(BJ405265) Dictyostelium discoideum cDNA clone:dds31j02, 3' end,
single read.
Length = 749

Score = 1477 bits (745), Expect = 0.0
Identities = 748/748 (100%)
Strand = Plus / Minus


Query: 677 attggattttgattttatggatccaccaccacaagataatattttgaattcaatgtatca 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 attggattttgattttatggatccaccaccacaagataatattttgaattcaatgtatca 690


Query: 737 actttgggtattgggagcattggatgatcaaggtcaaatcacaccattgggtaagagaat 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 actttgggtattgggagcattggatgatcaaggtcaaatcacaccattgggtaagagaat 630


Query: 797 gtcggaatttccattggatccaccactatcgaaaatggttatagttgcagagcaattggg 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gtcggaatttccattggatccaccactatcgaaaatggttatagttgcagagcaattggg 570


Query: 857 gtgtggtcaagatatagttacaatcgttagtatgttatcaatgccatcagttttctatag 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gtgtggtcaagatatagttacaatcgttagtatgttatcaatgccatcagttttctatag 510


Query: 917 acctaaaggtgctgaagaagagagtgatgcctcaagagagaaattctttgttccagaatc 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 acctaaaggtgctgaagaagagagtgatgcctcaagagagaaattctttgttccagaatc 450


Query: 977 cgatcatctaacattgttacatgtttatcaacaatggaaaatcaacaactatagctcaca 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cgatcatctaacattgttacatgtttatcaacaatggaaaatcaacaactatagctcaca 390


Query: 1037 atggtgtgctgaacattatattcacattaaagcaatgagaaaagttagagaggttcgtgg 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 atggtgtgctgaacattatattcacattaaagcaatgagaaaagttagagaggttcgtgg 330


Query: 1097 tcaactcttggatattatggtacaacatgatatgaaggttgaatcatgtggttcaaattg 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tcaactcttggatattatggtacaacatgatatgaaggttgaatcatgtggttcaaattg 270


Query: 1157 ggatatcattagaaaggctatcacttcttcttactttcatcattctgcaaagattaaagg 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ggatatcattagaaaggctatcacttcttcttactttcatcattctgcaaagattaaagg 210


Query: 1217 tattggtgaatatgtaaacatgagaaatggtatgccatgtttccttcatccaacaagtgc 1276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tattggtgaatatgtaaacatgagaaatggtatgccatgtttccttcatccaacaagtgc 150


Query: 1277 actctatggtcttggttatgctcccgactatattgtctaccatgaattagttatgacctc 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 actctatggtcttggttatgctcccgactatattgtctaccatgaattagttatgacctc 90


Query: 1337 aaaagaatatatgcaaattgtaaccgctgttgacccaaattggttagcnaaagggtccaa 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 aaaagaatatatgcaaattgtaaccgctgttgacccaaattggttagcnaaagggtccaa 30


Query: 1397 gtttttctcaatcaaaaaatcataaaag 1424
||||||||||||||||||||||||||||
Sbjct: 29 gtttttctcaatcaaaaaatcataaaag 2

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,363,145,527
Number of extensions: 78380107
Number of successful extensions: 5877556
Number of sequences better than 10.0: 239
Length of query: 1424
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1400
Effective length of database: 97,308,875,965
Effective search space: 136232426351000
Effective search space used: 136232426351000
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 2
Homology vs Protein
Query= Contig-U12068-1 (Contig-U12068-1Q) /CSM_Contig/Contig-U12068-1Q.Seq.d
(1424 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AF012942_1(AF012942|pid:none) Dictyostelium discoideum HelD (hel... 469 e-130
AM430065_1(AM430065|pid:none) Vitis vinifera contig VV78X096065.... 343 9e-93
AJ719786_1(AJ719786|pid:none) Gallus gallus mRNA for hypothetica... 343 1e-92
AK297269_1(AK297269|pid:none) Homo sapiens cDNA FLJ50987 complet... 342 3e-92
D86977_1(D86977|pid:none) Homo sapiens mRNA for KIAA0224 gene, p... 342 3e-92
AK297791_1(AK297791|pid:none) Homo sapiens cDNA FLJ50999 complet... 342 3e-92
AK301074_1(AK301074|pid:none) Homo sapiens cDNA FLJ51112 complet... 342 3e-92
AK172917_1(AK172917|pid:none) Mus musculus premature mRNA for mK... 342 3e-92
(Q92620) RecName: Full=Pre-mRNA-splicing factor ATP-dependent RN... 342 3e-92
AK293776_1(AK293776|pid:none) Homo sapiens cDNA FLJ55900 complet... 342 3e-92
CR860788_1(CR860788|pid:none) Pongo abelii mRNA; cDNA DKFZp459M2... 342 3e-92
AK291634_1(AK291634|pid:none) Homo sapiens cDNA FLJ76871 complet... 342 3e-92
(Q17R09) RecName: Full=Pre-mRNA-splicing factor ATP-dependent RN... 340 7e-92
FN357480_24(FN357480|pid:none) Schistosoma mansoni genome sequen... 337 5e-91
AE017345_252(AE017345|pid:none) Cryptococcus neoformans var. neo... 335 2e-90
CP000588_323(CP000588|pid:none) Ostreococcus lucimarinus CCE9901... 335 2e-90
(P34498) RecName: Full=Probable pre-mRNA-splicing factor ATP-dep... 334 4e-90
AP003815_2(AP003815|pid:none) Oryza sativa Japonica Group genomi... 334 5e-90
CR954208_319(CR954208|pid:none) Ostreococcus tauri strain OTTH05... 329 2e-88
CP001575_558(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 328 3e-88
AF305070_1(AF305070|pid:none) Chlamydomonas reinhardtii DEAH-box... 325 2e-87
CU633867_86(CU633867|pid:none) Podospora anserina genomic DNA ch... 323 9e-87
AM270404_15(AM270404|pid:none) Aspergillus niger contig An18c012... 317 9e-85
AP007155_837(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 312 2e-83
(Q9P774) RecName: Full=Pre-mRNA-splicing factor ATP-dependent RN... 305 3e-81
AL109846_1(AL109846|pid:none) S.pombe chromosome II cosmid c17G9... 305 3e-81
CR382128_342(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 280 9e-74
AL844509_626(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 265 3e-69
(P15938) RecName: Full=Pre-mRNA-splicing factor ATP-dependent RN... 265 4e-69
AM910993_64(AM910993|pid:none) Plasmodium knowlesi strain H chro... 261 4e-68
CR382121_327(CR382121|pid:none) Kluyveromyces lactis strain NRRL... 260 8e-68
CU928173_497(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 254 5e-66
FN392319_981(FN392319|pid:none) Pichia pastoris GS115 chromosome... 242 2e-62
CR380953_91(CR380953|pid:none) Candida glabrata strain CBS138 ch... 239 2e-61
CR940352_364(CR940352|pid:none) Theileria annulata strain Ankara... 233 1e-59
AP008208_1045(AP008208|pid:none) Oryza sativa (japonica cultivar... 230 8e-59
AK222021_1(AK222021|pid:none) Arabidopsis thaliana mRNA for ATP-... 226 2e-57
X97970_1(X97970|pid:none) A.thaliana mRNA for RNA helicase. &X9... 226 2e-57
(Q54F05) RecName: Full=ATP-dependent RNA helicase dhx8; ... 222 3e-56
CP000584_215(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 221 5e-56
(A2A4P0) RecName: Full=ATP-dependent RNA helicase DHX8; ... 217 7e-55
BC022656_1(BC022656|pid:none) Mus musculus DEAH (Asp-Glu-Ala-His... 217 7e-55
(Q14562) RecName: Full=ATP-dependent RNA helicase DHX8; ... 217 7e-55
AK142226_1(AK142226|pid:none) Mus musculus 13 days embryo heart ... 217 7e-55
CR861244_1(CR861244|pid:none) Pongo abelii mRNA; cDNA DKFZp459H0... 217 7e-55
BC044586_1(BC044586|pid:none) Homo sapiens DEAH (Asp-Glu-Ala-His... 217 1e-54
(Q09530) RecName: Full=Probable pre-mRNA-splicing factor ATP-dep... 216 2e-54
CR382136_599(CR382136|pid:none) Debaryomyces hansenii strain CBS... 214 5e-54
(O42643) RecName: Full=Pre-mRNA-splicing factor ATP-dependent RN... 208 3e-52
AP007175_389(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 208 4e-52
AE013599_1916(AE013599|pid:none) Drosophila melanogaster chromos... 207 8e-52
AY118656_1(AY118656|pid:none) Drosophila melanogaster SD07467 fu... 207 8e-52
AM270320_87(AM270320|pid:none) Aspergillus niger contig An14c013... 206 2e-51
CU928170_570(CU928170|pid:none) Kluyveromyces thermotolerans str... 206 2e-51
AE017344_83(AE017344|pid:none) Cryptococcus neoformans var. neof... 204 5e-51
CR382128_435(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 201 4e-50
FM992692_494(FM992692|pid:none) Candida dubliniensis CD36 chromo... 199 3e-49
FM992695_225(FM992695|pid:none) Candida dubliniensis CD36 chromo... 198 5e-49
AM910988_146(AM910988|pid:none) Plasmodium knowlesi strain H chr... 196 1e-48
AB001601_1(AB001601|pid:none) Homo sapiens DBP2 mRNA for ATP-dep... 196 2e-48
BC009147_1(BC009147|pid:none) Mus musculus DEAH (Asp-Glu-Ala-His... 196 2e-48
AK010431_1(AK010431|pid:none) Mus musculus ES cells cDNA, RIKEN ... 196 2e-48
AF119860_1(AF119860|pid:none) Homo sapiens PRO2014 mRNA, complet... 195 3e-48
DQ895906_1(DQ895906|pid:none) Synthetic construct Homo sapiens c... 195 3e-48
AL662798_5(AL662798|pid:none) Human DNA sequence from clone XXba... 195 3e-48
BX538350_83(BX538350|pid:none) Cryptosporidium parvum chromosome... 195 3e-48
AB113356_4(AB113356|pid:none) Sus scrofa 433 kb genomic segment,... 195 4e-48
AC005314_29(AC005314|pid:none) Arabidopsis thaliana chromosome 2... 195 4e-48
CR954204_228(CR954204|pid:none) Ostreococcus tauri strain OTTH05... 194 5e-48
A71434(A71434) probable RNA helicase - Arabidopsis thaliana &AL... 194 5e-48
BC045393_1(BC045393|pid:none) Danio rerio DEAH (Asp-Glu-Ala-His)... 193 1e-47
AP008214_825(AP008214|pid:none) Oryza sativa (japonica cultivar-... 192 2e-47
(Q54MH3) RecName: Full=Putative pre-mRNA-splicing factor ATP-dep... 192 3e-47
BC159087_1(BC159087|pid:none) Xenopus tropicalis DEAH (Asp-Glu-A... 191 4e-47
AK226760_1(AK226760|pid:none) Arabidopsis thaliana mRNA for puta... 191 7e-47
AE014134_3148(AE014134|pid:none) Drosophila melanogaster chromos... 190 1e-46
AC007767_27(AC007767|pid:none) Sequence of BAC F5D14 from Arabid... 189 2e-46
AY074318_1(AY074318|pid:none) Arabidopsis thaliana putative RNA ... 189 2e-46
AE016814_206(AE016814|pid:none) Ashbya gossypii (= Eremothecium ... 189 3e-46
CR382122_476(CR382122|pid:none) Kluyveromyces lactis strain NRRL... 187 8e-46
AK228850_1(AK228850|pid:none) Arabidopsis thaliana mRNA for puta... 187 1e-45
AM432240_1(AM432240|pid:none) Vitis vinifera contig VV78X180258.... 187 1e-45
AC105773_6(AC105773|pid:none) Oryza sativa (japonica cultivar-gr... 186 2e-45
(O45244) RecName: Full=Probable pre-mRNA-splicing factor ATP-dep... 185 3e-45
AP005866_14(AP005866|pid:none) Oryza sativa Japonica Group genom... 181 8e-44
AK303319_1(AK303319|pid:none) Homo sapiens cDNA FLJ56523 complet... 179 2e-43
AM920428_523(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 175 4e-42
AP007171_786(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 175 4e-42
FN317738_1(FN317738|pid:none) Schistosoma japonicum isolate Anhu... 174 5e-42
AC153352_12(AC153352|pid:none) Medicago truncatula clone mth2-10... 170 1e-40
BT034008_1(BT034008|pid:none) Zea mays full-length cDNA clone ZM... 170 1e-40
CP000600_38(CP000600|pid:none) Ostreococcus lucimarinus CCE9901 ... 169 2e-40
CR382130_407(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 169 2e-40
AL162507_1(AL162507|pid:none) Arabidopsis thaliana DNA chromosom... 168 4e-40
(O22899) RecName: Full=Probable pre-mRNA-splicing factor ATP-dep... 168 5e-40
EU961300_1(EU961300|pid:none) Zea mays clone 234415 pre-mRNA-spl... 167 1e-39
CT005263_107(CT005263|pid:none) Leishmania major strain Friedlin... 165 3e-39
AM502242_76(AM502242|pid:none) Leishmania infantum chromosome 24. 164 6e-39
BC161345_1(BC161345|pid:none) Xenopus tropicalis DHX33 protein, ... 164 1e-38
CR380952_292(CR380952|pid:none) Candida glabrata strain CBS138 c... 162 2e-38
CT005272_292(CT005272|pid:none) Leishmania major strain Friedlin... 161 6e-38
AM494961_111(AM494961|pid:none) Leishmania braziliensis chromoso... 161 6e-38
CR382122_18(CR382122|pid:none) Kluyveromyces lactis strain NRRL ... 160 8e-38
(O42945) RecName: Full=Probable pre-mRNA-splicing factor ATP-dep... 160 1e-37
(Q54NJ4) RecName: Full=Putative pre-mRNA-splicing factor ATP-dep... 159 2e-37
(P53131) RecName: Full=Pre-mRNA-splicing factor ATP-dependent RN... 159 2e-37
AM502254_119(AM502254|pid:none) Leishmania infantum chromosome 36. 159 2e-37
FM992690_393(FM992690|pid:none) Candida dubliniensis CD36 chromo... 159 2e-37
AK101456_1(AK101456|pid:none) Oryza sativa Japonica Group cDNA c... 158 5e-37
AK295760_1(AK295760|pid:none) Homo sapiens cDNA FLJ56443 complet... 158 5e-37
CR936655_1(CR936655|pid:none) Homo sapiens mRNA; cDNA DKFZp762F2... 157 7e-37
BC030017_1(BC030017|pid:none) Homo sapiens DEAH (Asp-Glu-Ala-His... 157 9e-37
AK295074_1(AK295074|pid:none) Homo sapiens cDNA FLJ59512 complet... 157 9e-37
(Q9H6R0) RecName: Full=Putative ATP-dependent RNA helicase DHX33... 157 9e-37
CU928180_263(CU928180|pid:none) Kluyveromyces thermotolerans str... 157 9e-37
CR954201_307(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 156 2e-36
(Q5RBD4) RecName: Full=Probable ATP-dependent RNA helicase DHX35... 155 3e-36
AB001636_1(AB001636|pid:none) Homo sapiens mRNA for ATP-dependen... 155 3e-36
(Q80VY9) RecName: Full=Putative ATP-dependent RNA helicase DHX33... 155 3e-36
AL596136_11(AL596136|pid:none) Mouse DNA sequence from clone RP2... 155 3e-36
AP007159_580(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 155 3e-36
AK303506_1(AK303506|pid:none) Homo sapiens cDNA FLJ55635 complet... 155 3e-36
CR936847_6(CR936847|pid:none) Mouse DNA sequence from clone DN-3... 155 3e-36
(Q5RAZ4) RecName: Full=Putative pre-mRNA-splicing factor ATP-dep... 155 3e-36
AK168835_1(AK168835|pid:none) Mus musculus 16 days embryo kidney... 155 3e-36
AL391146_2(AL391146|pid:none) Arabidopsis thaliana DNA chromosom... 155 4e-36
AK303396_1(AK303396|pid:none) Homo sapiens cDNA FLJ58559 complet... 154 8e-36
CR382133_387(CR382133|pid:none) Debaryomyces hansenii strain CBS... 154 8e-36
(Q9H5Z1) RecName: Full=Probable ATP-dependent RNA helicase DHX35... 154 8e-36
(Q20875) RecName: Full=Putative pre-mRNA-splicing factor ATP-dep... 154 8e-36
AK296793_1(AK296793|pid:none) Homo sapiens cDNA FLJ59566 complet... 154 1e-35
AM920436_670(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 154 1e-35
FN392319_1389(FN392319|pid:none) Pichia pastoris GS115 chromosom... 153 1e-35
CT573103_6(CT573103|pid:none) Zebrafish DNA sequence from clone ... 152 3e-35
AK035177_1(AK035177|pid:none) Mus musculus 12 days embryo embryo... 152 4e-35
AK026412_1(AK026412|pid:none) Homo sapiens cDNA: FLJ22759 fis, c... 151 5e-35
AE017342_163(AE017342|pid:none) Cryptococcus neoformans var. neo... 150 1e-34
BC121956_1(BC121956|pid:none) Xenopus tropicalis DEAH (Asp-Glu-A... 150 1e-34
AL844508_175(AL844508|pid:none) Plasmodium falciparum 3D7 chromo... 149 2e-34
T46568(T46568;T39926) ATP-dependent RNA helicase cdc28 [similari... 148 4e-34
U13644_7(U13644|pid:none) Caenorhabditis elegans cosmid F56D2, c... 148 4e-34
FN392321_510(FN392321|pid:none) Pichia pastoris GS115 chromosome... 147 7e-34
FM992690_144(FM992690|pid:none) Candida dubliniensis CD36 chromo... 146 2e-33
CP000496_448(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 146 2e-33
AM910989_149(AM910989|pid:none) Plasmodium knowlesi strain H chr... 144 6e-33
AM434544_1(AM434544|pid:none) Vitis vinifera contig VV78X073090.... 144 6e-33
EU956567_1(EU956567|pid:none) Zea mays clone 1566793 ATP-depende... 143 1e-32
CR940347_595(CR940347|pid:none) Theileria annulata strain Ankara... 141 5e-32
AL355930_10(AL355930|pid:none) Neurospora crassa DNA linkage gro... 140 1e-31
CP000591_240(CP000591|pid:none) Ostreococcus lucimarinus CCE9901... 137 1e-30
(Q9BKQ8) RecName: Full=Probable ATP-dependent RNA helicase DHX35... 137 1e-30
AE014134_813(AE014134|pid:none) Drosophila melanogaster chromoso... 135 3e-30
(Q5XH12) RecName: Full=Putative pre-mRNA-splicing factor ATP-dep... 134 8e-30
AL135748_1(AL135748|pid:none) S.pombe chromosome II cosmid c874. 133 2e-29
CR940348_671(CR940348|pid:none) Theileria annulata strain Ankara... 132 4e-29
AE014134_1854(AE014134|pid:none) Drosophila melanogaster chromos... 131 5e-29
CU638744_138(CU638744|pid:none) Podospora anserina genomic DNA c... 128 4e-28
AM920431_236(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 128 4e-28
CP000081_118(CP000081|pid:none) Leishmania major chromosome 35, ... 128 6e-28
FN357349_17(FN357349|pid:none) Schistosoma mansoni genome sequen... 124 8e-27
AM494971_112(AM494971|pid:none) Leishmania braziliensis chromoso... 124 1e-26
AP007151_1392(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 123 1e-26
AK315430_1(AK315430|pid:none) Homo sapiens cDNA, FLJ96486, highl... 123 1e-26
AK024869_1(AK024869|pid:none) Homo sapiens cDNA: FLJ21216 fis, c... 122 4e-26
AM502253_128(AM502253|pid:none) Leishmania infantum chromosome 35. 122 4e-26
AL162051_1(AL162051|pid:none) Homo sapiens mRNA; cDNA DKFZp434F1... 122 4e-26
BC006911_1(BC006911|pid:none) Mus musculus DEAH (Asp-Glu-Ala-His... 121 5e-26
AK172504_1(AK172504|pid:none) Mus musculus activated spleen cDNA... 121 5e-26
AK033624_1(AK033624|pid:none) Mus musculus adult male cecum cDNA... 121 5e-26
AC079280_17(AC079280|pid:none) Arabidopsis thaliana chromosome 1... 120 1e-25
DQ158858_63(DQ158858|pid:none) Bigelowiella natans nucleomorph c... 120 1e-25
AM270157_54(AM270157|pid:none) Aspergillus niger contig An08c002... 120 2e-25
AM448189_2(AM448189|pid:none) Vitis vinifera contig VV78X242969.... 120 2e-25
BX284751_25(BX284751|pid:none) Neurospora crassa DNA linkage gro... 119 2e-25
AE017341_693(AE017341|pid:none) Cryptococcus neoformans var. neo... 119 2e-25
(O17438) RecName: Full=Putative pre-mRNA-splicing factor ATP-dep... 119 3e-25
BC037925_1(BC037925|pid:none) Homo sapiens DEAH (Asp-Glu-Ala-His... 119 4e-25
AE014188_302(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 117 1e-24
AK001751_1(AK001751|pid:none) Homo sapiens cDNA FLJ10889 fis, cl... 117 1e-24
AM910996_481(AM910996|pid:none) Plasmodium knowlesi strain H chr... 116 2e-24
BC100343_1(BC100343|pid:none) Mus musculus DEAH (Asp-Glu-Ala-His... 116 2e-24
AK091334_1(AK091334|pid:none) Homo sapiens cDNA FLJ34015 fis, cl... 115 5e-24
AK299151_1(AK299151|pid:none) Homo sapiens cDNA FLJ58252 complet... 113 2e-23
AL832510_1(AL832510|pid:none) Homo sapiens mRNA; cDNA DKFZp667A1... 113 2e-23
(Q5R864) RecName: Full=Probable ATP-dependent RNA helicase DHX40... 113 2e-23
BC149802_1(BC149802|pid:none) Bos taurus DEAH (Asp-Glu-Ala-His) ... 112 3e-23
(Q5XI69) RecName: Full=Probable ATP-dependent RNA helicase DHX40... 112 3e-23
CR380955_237(CR380955|pid:none) Candida glabrata strain CBS138 c... 112 3e-23
AK075991_1(AK075991|pid:none) Mus musculus 10 days embryo whole ... 112 3e-23
AF461690_1(AF461690|pid:none) Homo sapiens DEAD-box containing h... 112 3e-23
CR954205_415(CR954205|pid:none) Ostreococcus tauri strain OTTH05... 111 7e-23
AF319521_1(AF319521|pid:none) Homo sapiens ARG147 mRNA, complete... 110 1e-22
AC069471_2(AC069471|pid:none) Arabidopsis thaliana chromosome 1 ... 109 2e-22
AC132211_3(AC132211|pid:none) Caenorhabditis elegans cosmid Y108... 109 3e-22
AY813717_1(AY813717|pid:none) Schistosoma japonicum SJCHGC06976 ... 108 4e-22
CP000585_401(CP000585|pid:none) Ostreococcus lucimarinus CCE9901... 108 6e-22
CR382126_268(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 106 2e-21
AY581809_1(AY581809|pid:none) Trypanosoma brucei RNA helicase Pr... 106 2e-21
AC079933_28(AC079933|pid:none) Trypanosoma brucei chromosome 4 c... 106 2e-21
AE016817_687(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 105 4e-21
AL590450_86(AL590450|pid:none) chromosome XI of strain GB-M1 of ... 104 7e-21
(P20095) RecName: Full=Pre-mRNA-splicing factor ATP-dependent RN... 103 2e-20
BC047577_1(BC047577|pid:none) Homo sapiens DEAH (Asp-Glu-Ala-His... 102 3e-20
AK149869_1(AK149869|pid:none) Mus musculus bone marrow macrophag... 102 4e-20
CR855735_1(CR855735|pid:none) Xenopus tropicalis finished cDNA, ... 102 4e-20
AM920431_1089(AM920431|pid:none) Penicillium chrysogenum Wiscons... 99 3e-19
AY811438_1(AY811438|pid:none) Schistosoma japonicum SJCHGC03421 ... 99 4e-19
CR954201_268(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 99 4e-19
CP000444_2120(CP000444|pid:none) Shewanella sp. MR-7, complete g... 98 8e-19
CP000469_1883(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 97 1e-18
CP000103_1387(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 97 1e-18
CP000510_1069(CP000510|pid:none) Psychromonas ingrahamii 37, com... 97 1e-18
AL590451_15(AL590451|pid:none) chromosome IX of strain GB-M1 of ... 97 1e-18
AE016795_2174(AE016795|pid:none) Vibrio vulnificus CMCP6 chromos... 97 1e-18
EU952195_1(EU952195|pid:none) Zea mays clone 1219554 unknown mRNA. 96 2e-18
AK025713_1(AK025713|pid:none) Homo sapiens cDNA: FLJ22060 fis, c... 96 3e-18
AP007171_653(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 96 4e-18
CP000270_2903(CP000270|pid:none) Burkholderia xenovorans LB400 c... 95 5e-18
EF103588_2(EF103588|pid:none) Nosema bombycis Sec61gamma (Sec61g... 95 5e-18
CP000446_1831(CP000446|pid:none) Shewanella sp. MR-4, complete g... 95 5e-18
CP000572_2665(CP000572|pid:none) Burkholderia pseudomallei 1106a... 95 7e-18
FM954972_1677(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 95 7e-18
CP001408_2784(CP001408|pid:none) Burkholderia pseudomallei MSHR3... 95 7e-18
(Q3ZBE0) RecName: Full=ATP-dependent RNA helicase DQX1; ... 94 9e-18
CP000124_2738(CP000124|pid:none) Burkholderia pseudomallei 1710b... 94 1e-17
CP000570_2612(CP000570|pid:none) Burkholderia pseudomallei 668 c... 94 1e-17
AE017282_1399(AE017282|pid:none) Methylococcus capsulatus str. B... 94 1e-17
CP000591_190(CP000591|pid:none) Ostreococcus lucimarinus CCE9901... 94 2e-17
CP000086_1809(CP000086|pid:none) Burkholderia thailandensis E264... 93 2e-17
CU928165_243(CU928165|pid:none) Kluyveromyces thermotolerans str... 93 2e-17
CP000753_1903(CP000753|pid:none) Shewanella baltica OS185, compl... 93 2e-17
DQ158856_23(DQ158856|pid:none) Bigelowiella natans nucleomorph c... 92 4e-17
CP000388_2155(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 92 5e-17
AP009493_3884(AP009493|pid:none) Streptomyces griseus subsp. gri... 92 5e-17
BC075018_1(BC075018|pid:none) Homo sapiens DEAQ box RNA-dependen... 92 6e-17
(Q8TE96) RecName: Full=ATP-dependent RNA helicase DQX1; ... 92 6e-17
AK074337_1(AK074337|pid:none) Homo sapiens cDNA FLJ23757 fis, cl... 92 6e-17
CP000563_1876(CP000563|pid:none) Shewanella baltica OS155, compl... 92 6e-17
CP000614_2208(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 91 8e-17
FN357690_11(FN357690|pid:none) Schistosoma mansoni genome sequen... 91 8e-17
CP000116_2008(CP000116|pid:none) Thiobacillus denitrificans ATCC... 91 1e-16
CP000544_1360(CP000544|pid:none) Halorhodospira halophila SL1, c... 91 1e-16
AM181176_4443(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 91 1e-16
CP000926_4027(CP000926|pid:none) Pseudomonas putida GB-1, comple... 91 1e-16
AE004091_3297(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 90 2e-16
CP001154_2264(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 90 2e-16
CR382128_462(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 90 2e-16
AP009385_2095(AP009385|pid:none) Burkholderia multivorans ATCC 1... 89 3e-16
CR555306_2313(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 89 3e-16
CP000712_1327(CP000712|pid:none) Pseudomonas putida F1, complete... 89 3e-16
CP001139_1540(CP001139|pid:none) Vibrio fischeri MJ11 chromosome... 89 4e-16
AM747720_2226(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 89 4e-16
CP000020_1510(CP000020|pid:none) Vibrio fischeri ES114 chromosom... 89 4e-16
L15328_1(L15328|pid:none) Saccharomyces cerevisiae RNA helicase ... 89 4e-16
AM260479_2286(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 89 5e-16
CU928161_1455(CU928161|pid:none) Escherichia coli S88 chromosome... 89 5e-16
CP000243_1603(CP000243|pid:none) Escherichia coli UTI89, complet... 89 5e-16
FM180568_1551(FM180568|pid:none) Escherichia coli 0127:H6 E2348/... 89 5e-16
CP000380_434(CP000380|pid:none) Burkholderia cenocepacia AU 1054... 89 5e-16
CU928162_1540(CU928162|pid:none) Escherichia coli ED1a chromosom... 89 5e-16
CP000266_1668(CP000266|pid:none) Shigella flexneri 5 str. 8401, ... 88 7e-16
CP001063_1400(CP001063|pid:none) Shigella boydii CDC 3083-94, co... 88 7e-16
EU901360_1(EU901360|pid:none) Escherichia coli strain 493/89 ATP... 88 7e-16
CP000946_2194(CP000946|pid:none) Escherichia coli ATCC 8739, com... 88 7e-16
CU928164_1710(CU928164|pid:none) Escherichia coli IAI39 chromoso... 88 7e-16
CP000450_1293(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 88 7e-16
CP001281_3497(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 88 7e-16
CP001025_2043(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 88 7e-16
AE005174_2066(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 88 7e-16
CP000038_1625(CP000038|pid:none) Shigella sonnei Ss046, complete... 88 7e-16
CP000970_1696(CP000970|pid:none) Escherichia coli SMS-3-5, compl... 88 7e-16
CU928163_1637(CU928163|pid:none) Escherichia coli UMN026 chromos... 88 7e-16
AL954747_833(AL954747|pid:none) Nitrosomonas europaea ATCC 19718... 88 9e-16
CP000749_2495(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 87 1e-15
CP000802_1424(CP000802|pid:none) Escherichia coli HS, complete g... 87 1e-15
BA000031_1453(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22... 87 1e-15
(Q924H9) RecName: Full=ATP-dependent RNA helicase DQX1; ... 87 1e-15
FM178379_1700(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ... 87 1e-15
AE016853_3996(AE016853|pid:none) Pseudomonas syringae pv. tomato... 87 1e-15
CP000859_980(CP000859|pid:none) Desulfococcus oleovorans Hxd3, c... 87 1e-15
CP000076_1506(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 87 2e-15
CU928176_385(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 87 2e-15
BX936398_2239(BX936398|pid:none) Yersinia pseudotuberculosis IP3... 87 2e-15
CU928158_1517(CU928158|pid:none) Escherichia fergusonii ATCC 354... 87 2e-15
CP000088_2310(CP000088|pid:none) Thermobifida fusca YX, complete... 87 2e-15
AC0283(AC0283) ATP-dependent helicase [imported] - Yersinia pest... 87 2e-15
CP000058_1372(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 86 3e-15
CP000284_1209(CP000284|pid:none) Methylobacillus flagellatus KT,... 86 3e-15
CP001503_2371(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 86 3e-15
CP000075_3830(CP000075|pid:none) Pseudomonas syringae pv. syring... 86 3e-15
AM494957_176(AM494957|pid:none) Leishmania braziliensis chromoso... 86 3e-15
FJ392609_9(FJ392609|pid:none) Streptomyces pactum strain ATCC 27... 86 3e-15
AM746676_6395(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 86 3e-15
CP001339_248(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, c... 86 4e-15
(Q8VHK9) RecName: Full=Probable ATP-dependent RNA helicase DHX36... 85 6e-15
AP009240_1496(AP009240|pid:none) Escherichia coli SE11 DNA, comp... 85 6e-15
AK013031_1(AK013031|pid:none) Mus musculus 10, 11 days embryo wh... 85 6e-15
CT573326_3676(CT573326|pid:none) Pseudomonas entomophila str. L4... 85 6e-15
CP000880_1291(CP000880|pid:none) Salmonella enterica subsp. ariz... 85 7e-15
CP000026_1157(CP000026|pid:none) Salmonella enterica subsp. ente... 85 7e-15
CP001144_1552(CP001144|pid:none) Salmonella enterica subsp. ente... 85 7e-15
AL023803_6(AL023803|pid:none) Human DNA sequence from clone RP4-... 85 7e-15
CP001127_1658(CP001127|pid:none) Salmonella enterica subsp. ente... 85 7e-15
CP001120_1712(CP001120|pid:none) Salmonella enterica subsp. ente... 85 7e-15
AE014613_1443(AE014613|pid:none) Salmonella enterica subsp. ente... 85 7e-15
AE006468_1595(AE006468|pid:none) Salmonella enterica subsp. ente... 85 7e-15
AM933172_1400(AM933172|pid:none) Salmonella enterica subsp. ente... 85 7e-15
AC145165_16(AC145165|pid:none) Medicago truncatula clone mth2-4j... 84 1e-14
CP001113_1661(CP001113|pid:none) Salmonella enterica subsp. ente... 84 1e-14
CP000789_2402(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 84 1e-14
CP000282_1107(CP000282|pid:none) Saccharophagus degradans 2-40, ... 84 1e-14
CP001091_387(CP001091|pid:none) Actinobacillus pleuropneumoniae ... 84 1e-14
CU914168_1596(CU914168|pid:none) Ralstonia solanacearum strain I... 84 1e-14
CP000090_2047(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 84 1e-14
CU695238_84(CU695238|pid:none) Ralstonia solanacearum strain Mol... 84 1e-14
CP001324_782(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 84 2e-14
CP000822_1395(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 84 2e-14
CP000947_1435(CP000947|pid:none) Haemophilus somnus 2336, comple... 84 2e-14
CP000269_1180(CP000269|pid:none) Janthinobacterium sp. Marseille... 84 2e-14
BX571866_92(BX571866|pid:none) Photorhabdus luminescens subsp. l... 83 2e-14
AJ577134_1(AJ577134|pid:none) Homo sapiens mRNA for putative DEx... 83 3e-14
AB040921_1(AB040921|pid:none) Homo sapiens mRNA for KIAA1488 pro... 83 3e-14
CP001331_177(CP001331|pid:none) Micromonas sp. RCC299 chromosome... 83 3e-14
CP000582_489(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 83 3e-14
AC006837_9(AC006837|pid:none) Arabidopsis thaliana chromosome 2 ... 83 3e-14
AE017340_1363(AE017340|pid:none) Idiomarina loihiensis L2TR, com... 83 3e-14
AM494972_99(AM494972|pid:none) Leishmania braziliensis chromosom... 83 3e-14
CP000580_5526(CP000580|pid:none) Mycobacterium sp. JLS, complete... 83 3e-14
AK314435_1(AK314435|pid:none) Homo sapiens cDNA, FLJ95232, highl... 83 3e-14
A84421(A84421)probable ATP-dependent RNA helicase A [imported] -... 83 3e-14
CP000462_2159(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 82 4e-14
CP001635_2682(CP001635|pid:none) Variovorax paradoxus S110 chrom... 82 4e-14
AC073555_17(AC073555|pid:none) Arabidopsis thaliana chromosome 1... 82 5e-14
CP000746_1135(CP000746|pid:none) Actinobacillus succinogenes 130... 82 5e-14
AP006725_2240(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 82 5e-14
CP000934_2305(CP000934|pid:none) Cellvibrio japonicus Ueda107, c... 82 6e-14
AM286415_1988(AM286415|pid:none) Yersinia enterocolitica subsp. ... 82 6e-14
CP000478_2933(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 82 6e-14
FN392321_686(FN392321|pid:none) Pichia pastoris GS115 chromosome... 82 6e-14
CR940347_1057(CR940347|pid:none) Theileria annulata strain Ankar... 82 6e-14
BX842628_3(BX842628|pid:none) Neurospora crassa DNA linkage grou... 82 6e-14
CP000569_361(CP000569|pid:none) Actinobacillus pleuropneumoniae ... 82 6e-14
CU207211_1010(CU207211|pid:none) Herminiimonas arsenicoxydans ch... 81 8e-14
CU928181_40(CU928181|pid:none) Zygosaccharomyces rouxii strain C... 81 8e-14
AM487368_1(AM487368|pid:none) Vitis vinifera contig VV78X074410.... 81 1e-13
CP000656_1050(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 81 1e-13
AE016825_1516(AE016825|pid:none) Chromobacterium violaceum ATCC ... 81 1e-13
BA000030_4135(BA000030|pid:none) Streptomyces avermitilis MA-468... 81 1e-13
CU458896_53(CU458896|pid:none) Mycobacterium abscessus chromosom... 81 1e-13
CP000583_466(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 80 1e-13
AE017341_354(AE017341|pid:none) Cryptococcus neoformans var. neo... 80 2e-13
AP008232_1491(AP008232|pid:none) Sodalis glossinidius str. 'mors... 79 3e-13
AL844507_204(AL844507|pid:none) Plasmodium falciparum 3D7 chromo... 79 4e-13
DQ158857_87(DQ158857|pid:none) Bigelowiella natans nucleomorph c... 79 4e-13
(P45018) RecName: Full=ATP-dependent RNA helicase hrpA homolog; ... 79 4e-13
CP000431_6727(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 79 5e-13
AC069145_1(AC069145|pid:none) Oryza sativa chromosome 10 BAC OSJ... 79 5e-13
AC026815_21(AC026815|pid:none) Oryza sativa chromosome 10 BAC OS... 79 5e-13
CP000057_1079(CP000057|pid:none) Haemophilus influenzae 86-028NP... 78 7e-13
AL592222_9(AL592222|pid:none) Mouse DNA sequence from clone RP23... 78 7e-13
FM211048_45(FM211048|pid:none) Photorhabdus asymbiotica subsp. a... 78 7e-13
BX248358_55(BX248358|pid:none) Corynebacterium diphtheriae gravi... 78 7e-13
CP000653_1934(CP000653|pid:none) Enterobacter sp. 638, complete ... 78 9e-13
CP000285_1457(CP000285|pid:none) Chromohalobacter salexigens DSM... 78 9e-13
AE014187_718(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 78 9e-13
CU468135_1671(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 77 1e-12
AP008957_2779(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 77 1e-12
CP000499_68(CP000499|pid:none) Pichia stipitis CBS 6054 chromoso... 77 1e-12
D42105_2(D42105|pid:none) Escherichia coli genes for hypothetica... 77 1e-12
CP000471_1862(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 77 2e-12
CP000479_2623(CP000479|pid:none) Mycobacterium avium 104, comple... 77 2e-12
CP000961_2658(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 77 2e-12
AY036974_1(AY036974|pid:none) Homo sapiens nucleic acid helicase... 77 2e-12
AE016958_1684(AE016958|pid:none) Mycobacterium avium subsp. para... 77 2e-12
AL079292_1(AL079292|pid:none) Homo sapiens mRNA full length inse... 77 2e-12
CP000826_2586(CP000826|pid:none) Serratia proteamaculans 568, co... 77 2e-12
BC056219_1(BC056219|pid:none) Homo sapiens DEAH (Asp-Glu-Ala-His... 77 2e-12
(Q7Z478) RecName: Full=ATP-dependent RNA helicase DHX29; ... 77 2e-12
AL939118_250(AL939118|pid:none) Streptomyces coelicolor A3(2) co... 76 3e-12
AP011115_6777(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 76 3e-12
CP000453_1614(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-... 76 3e-12
(Q8IY37) RecName: Full=Probable ATP-dependent RNA helicase DHX37... 76 3e-12
CR382129_83(CR382129|pid:none) Yarrowia lipolytica strain CLIB12... 76 3e-12
CP000671_1179(CP000671|pid:none) Haemophilus influenzae PittEE, ... 76 3e-12
BC002575_1(BC002575|pid:none) Homo sapiens DEAH (Asp-Glu-Ala-His... 75 4e-12
CR543861_1924(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 75 4e-12
AM920436_192(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 75 6e-12
CR380952_263(CR380952|pid:none) Candida glabrata strain CBS138 c... 75 6e-12
CP001322_3863(CP001322|pid:none) Desulfatibacillum alkenivorans ... 75 6e-12
CP001600_1856(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 75 8e-12
AC007017_17(AC007017|pid:none) Arabidopsis thaliana chromosome 2... 75 8e-12
AK221966_1(AK221966|pid:none) Arabidopsis thaliana mRNA for ATP-... 75 8e-12
CP001574_93(CP001574|pid:none) Micromonas sp. RCC299 chromosome ... 74 1e-11
AM502254_176(AM502254|pid:none) Leishmania infantum chromosome 36. 74 1e-11
AM711867_2447(AM711867|pid:none) Clavibacter michiganensis subsp... 74 2e-11
AE016817_540(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 74 2e-11
CR382137_908(CR382137|pid:none) Debaryomyces hansenii strain CBS... 74 2e-11
CP000910_1390(CP000910|pid:none) Renibacterium salmoninarum ATCC... 74 2e-11
CP001050_1988(CP001050|pid:none) Neisseria gonorrhoeae NCCP11945... 73 2e-11
AP007161_155(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 73 2e-11
CP001618_227(CP001618|pid:none) Beutenbergia cavernae DSM 12333,... 73 2e-11
AE004969_1086(AE004969|pid:none) Neisseria gonorrhoeae FA 1090, ... 73 2e-11
AP008209_2630(AP008209|pid:none) Oryza sativa (japonica cultivar... 73 2e-11
CP000586_273(CP000586|pid:none) Ostreococcus lucimarinus CCE9901... 73 2e-11
CR931997_1104(CR931997|pid:none) Corynebacterium jeikeium K411 c... 73 2e-11
CP000381_173(CP000381|pid:none) Neisseria meningitidis 053442, c... 73 3e-11
AM421808_1819(AM421808|pid:none) Neisseria meningitidis serogrou... 73 3e-11
A81960(A81960) probable DNA helicase NMA0430 [imported] - Neisse... 73 3e-11
CP000937_1244(CP000937|pid:none) Francisella philomiragia subsp.... 72 4e-11
AC116305_7(AC116305|pid:none) Dictyostelium discoideum chromosom... 72 4e-11
AL021710_12(AL021710|pid:none) Arabidopsis thaliana DNA chromoso... 72 4e-11
CP000680_1501(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 72 5e-11
(Q6PGC1) RecName: Full=ATP-dependent RNA helicase Dhx29; ... 72 5e-11
AP009044_1790(AP009044|pid:none) Corynebacterium glutamicum R DN... 72 6e-11
CP000820_1276(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 71 8e-11
AE002098_1924(AE002098|pid:none) Neisseria meningitidis MC58, co... 71 8e-11
CU468230_1417(CU468230|pid:none) Acinetobacter baumannii str. SD... 71 8e-11
CU633454_75(CU633454|pid:none) Podospora anserina genomic DNA ch... 71 8e-11
CP000521_1287(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 71 1e-10
AE008922_2898(AE008922|pid:none) Xanthomonas campestris pv. camp... 71 1e-10
CP000249_3407(CP000249|pid:none) Frankia sp. CcI3, complete geno... 70 1e-10
CP000851_2421(CP000851|pid:none) Shewanella pealeana ATCC 700345... 70 1e-10
AM920689_1226(AM920689|pid:none) Xanthomonas campestris pv. camp... 70 1e-10
AL670009_33(AL670009|pid:none) Neurospora crassa DNA linkage gro... 70 1e-10
CP001601_1468(CP001601|pid:none) Corynebacterium aurimucosum ATC... 70 1e-10
BC166336_1(BC166336|pid:none) Xenopus tropicalis cDNA clone MGC:... 70 1e-10
CP001182_1305(CP001182|pid:none) Acinetobacter baumannii AB0057,... 70 1e-10
CP000480_6377(CP000480|pid:none) Mycobacterium smegmatis str. MC... 70 2e-10
AM420293_6021(AM420293|pid:none) Saccharopolyspora erythraea NRR... 70 2e-10
AE013598_1706(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 70 2e-10
AM039952_3253(AM039952|pid:none) Xanthomonas campestris pv. vesi... 70 2e-10
AP009152_954(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, c... 69 3e-10
AL935288_7(AL935288|pid:none) Zebrafish DNA sequence from clone ... 69 4e-10
U97014_3(U97014|pid:none) Caenorhabditis elegans cosmid T05E8, c... 69 4e-10
AP004380_19(AP004380|pid:none) Oryza sativa Japonica Group genom... 69 4e-10
AM743169_3484(AM743169|pid:none) Stenotrophomonas maltophilia K2... 69 5e-10
CP000513_591(CP000513|pid:none) Dichelobacter nodosus VCS1703A, ... 68 7e-10
AE009442_583(AE009442|pid:none) Xylella fastidiosa Temecula1, co... 68 9e-10
CP001011_635(CP001011|pid:none) Xylella fastidiosa M23, complete... 68 9e-10
AM458223_2(AM458223|pid:none) Vitis vinifera contig VV78X119505.... 67 1e-09
AK064890_1(AK064890|pid:none) Oryza sativa Japonica Group cDNA c... 67 1e-09
CP001071_794(CP001071|pid:none) Akkermansia muciniphila ATCC BAA... 67 1e-09
BC166221_1(BC166221|pid:none) Xenopus tropicalis hypothetical pr... 67 1e-09
BC066091_1(BC066091|pid:none) Mus musculus DEAH (Asp-Glu-Ala-Asp... 67 2e-09
(Q6P5D3) RecName: Full=Putative ATP-dependent RNA helicase DHX57... 67 2e-09
BX294140_62(BX294140|pid:none) Rhodopirellula baltica SH 1 compl... 67 2e-09
BC026474_1(BC026474|pid:none) Mus musculus DEAH (Asp-Glu-Ala-Asp... 67 2e-09
AF283512_1(AF283512|pid:none) Homo sapiens putative DEAH-box RNA... 66 3e-09
AC018693_2(AC018693|pid:none) Homo sapiens BAC clone RP11-555N21... 66 3e-09
BC065278_1(BC065278|pid:none) Homo sapiens DEAH (Asp-Glu-Ala-Asp... 66 3e-09
BC131534_1(BC131534|pid:none) Homo sapiens DEAH (Asp-Glu-Ala-Asp... 66 3e-09
AL353995_28(AL353995|pid:none) Arabidopsis thaliana DNA chromoso... 66 3e-09
AK226258_1(AK226258|pid:none) Arabidopsis thaliana mRNA for RNA ... 66 3e-09
(Q6P158) RecName: Full=Putative ATP-dependent RNA helicase DHX57... 66 3e-09
BC053623_1(BC053623|pid:none) Homo sapiens DEAH (Asp-Glu-Ala-Asp... 66 3e-09
U10245_1(U10245|pid:none) Arabidopsis thaliana Col-O putative RN... 66 3e-09
CR954218_173(CR954218|pid:none) Ostreococcus tauri strain OTTH05... 66 4e-09
AM270349_6(AM270349|pid:none) Aspergillus niger contig An15c0220... 66 4e-09
CP000509_3642(CP000509|pid:none) Nocardioides sp. JS614, complet... 66 4e-09
AC146875_19(AC146875|pid:none) Brassica rapa clone BAC KBrH117M1... 66 4e-09
CP001324_311(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 65 6e-09
CP001628_739(CP001628|pid:none) Micrococcus luteus NCTC 2665, co... 65 8e-09
AL080237_4(AL080237|pid:none) Arabidopsis thaliana DNA chromosom... 65 8e-09
AE014134_3381(AE014134|pid:none) Drosophila melanogaster chromos... 64 1e-08
CP001328_7(CP001328|pid:none) Micromonas sp. RCC299 chromosome 7... 64 1e-08
CU640366_342(CU640366|pid:none) Podospora anserina genomic DNA c... 64 1e-08
BX640428_73(BX640428|pid:none) Bordetella parapertussis strain 1... 63 2e-08
AL590449_67(AL590449|pid:none) chromosome X of strain GB-M1 of E... 63 2e-08
CT573213_5492(CT573213|pid:none) Frankia alni str. ACN14A chromo... 63 2e-08
AE017226_1642(AE017226|pid:none) Treponema denticola ATCC 35405,... 63 2e-08
BC137285_1(BC137285|pid:none) Homo sapiens YTH domain containing... 62 4e-08
(Q9H6S0) RecName: Full=YTH domain-containing protein 2; &AK0255... 62 5e-08
CP000082_1049(CP000082|pid:none) Psychrobacter arcticus 273-4, c... 62 5e-08
BC080856_1(BC080856|pid:none) Mus musculus DEAH (Asp-Glu-Ala-His... 61 9e-08
(Q9DBV3) RecName: Full=Probable ATP-dependent RNA helicase DHX34... 61 9e-08
CP001013_2216(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 61 9e-08
AK004733_1(AK004733|pid:none) Mus musculus adult male lung cDNA,... 61 9e-08
AK129062_1(AK129062|pid:none) Mus musculus mRNA for mKIAA0134 pr... 61 9e-08
CP000884_4532(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 61 9e-08
CP001392_1518(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 61 1e-07
AE016819_455(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 61 1e-07
CP000539_2219(CP000539|pid:none) Acidovorax sp. JS42, complete g... 61 1e-07
CP001614_954(CP001614|pid:none) Teredinibacter turnerae T7901, c... 61 1e-07
AP007164_103(AP007164|pid:none) Aspergillus oryzae RIB40 genomic... 60 1e-07
BC098802_1(BC098802|pid:none) Rattus norvegicus DEAH (Asp-Glu-Al... 60 1e-07
(Q22307) RecName: Full=Probable ATP-dependent RNA helicase A; ... 60 2e-07
EF554693_1(EF554693|pid:none) Bombyx mori MLE protein mRNA, comp... 59 3e-07
FN357831_8(FN357831|pid:none) Schistosoma mansoni genome sequenc... 59 3e-07
AF228511_1(AF228511|pid:none) Trypanosoma cruzi putative DEAH-bo... 59 3e-07
AE017342_538(AE017342|pid:none) Cryptococcus neoformans var. neo... 59 4e-07
AE000520_521(AE000520|pid:none) Treponema pallidum subsp. pallid... 59 4e-07
AM270335_7(AM270335|pid:none) Aspergillus niger contig An15c0080... 59 4e-07
BX571812_2(BX571812|pid:none) Zebrafish DNA sequence from clone ... 59 4e-07
AC080131_36(AC080131|pid:none) Trypanosoma brucei chromosome 4 c... 59 4e-07
AM920428_490(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 59 4e-07
(Q68FK8) RecName: Full=ATP-dependent RNA helicase A-like protein... 59 6e-07
CP000512_2511(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 59 6e-07
AM502252_113(AM502252|pid:none) Leishmania infantum chromosome 34. 59 6e-07
CP001341_2328(CP001341|pid:none) Arthrobacter chlorophenolicus A... 59 6e-07
FN357690_10(FN357690|pid:none) Schistosoma mansoni genome sequen... 59 6e-07

>AF012942_1(AF012942|pid:none) Dictyostelium discoideum HelD (helD)
gene, partial cds.
Length = 502

Score = 469 bits (1206), Expect = e-130
Identities = 226/226 (100%), Positives = 226/226 (100%)
Frame = +3

Query: 708 QDNILNSMYQLWVLGALDDQGQITPLGKRMSEFPLDPPLSKMVIVAEQLGCGQDIVTIVS 887
QDNILNSMYQLWVLGALDDQGQITPLGKRMSEFPLDPPLSKMVIVAEQLGCGQDIVTIVS
Sbjct: 160 QDNILNSMYQLWVLGALDDQGQITPLGKRMSEFPLDPPLSKMVIVAEQLGCGQDIVTIVS 219

Query: 888 MLSMPSVFYRPKGAEEESDASREKFFVPESDHLTLLHVYQQWKINNYSSQWCAEHYIHIK 1067
MLSMPSVFYRPKGAEEESDASREKFFVPESDHLTLLHVYQQWKINNYSSQWCAEHYIHIK
Sbjct: 220 MLSMPSVFYRPKGAEEESDASREKFFVPESDHLTLLHVYQQWKINNYSSQWCAEHYIHIK 279

Query: 1068 AMRKVREVRGQLLDIMVQHDMKVESCGSNWDIIRKAITSSYFHHSAKIKGIGEYVNMRNG 1247
AMRKVREVRGQLLDIMVQHDMKVESCGSNWDIIRKAITSSYFHHSAKIKGIGEYVNMRNG
Sbjct: 280 AMRKVREVRGQLLDIMVQHDMKVESCGSNWDIIRKAITSSYFHHSAKIKGIGEYVNMRNG 339

Query: 1248 MPCFLHPTSALYGLGYAPDYIVYHELVMTSKEYMQIVTAVDPNWLA 1385
MPCFLHPTSALYGLGYAPDYIVYHELVMTSKEYMQIVTAVDPNWLA
Sbjct: 340 MPCFLHPTSALYGLGYAPDYIVYHELVMTSKEYMQIVTAVDPNWLA 385

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,780,130,095
Number of extensions: 37640115
Number of successful extensions: 81217
Number of sequences better than 10.0: 696
Number of HSP's gapped: 79437
Number of HSP's successfully gapped: 719
Length of query: 474
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 342
Effective length of database: 623,955,076
Effective search space: 213392635992
Effective search space used: 213392635992
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.36 gvh: 0.19 alm: 0.39 top: 0.53 tms: 0.00 mit: 0.28 mip: 0.02
nuc: 0.23 erl: 0.00 erm: 0.80 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

64.0 %: nuclear
20.0 %: cytoplasmic
12.0 %: mitochondrial
4.0 %: peroxisomal

>> prediction for Contig-U12068-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 1
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0