| Contig-U12038-1 |
| Contig ID |
Contig-U12038-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1242 |
| Chromosome number (1..6, M) |
3 |
| Chromosome length |
6358359 |
| Start point |
5444656 |
| End point |
5445884 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
2 |
| Number of EST |
4 |
| Link to clone list |
U12038 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.28 |
| Homology vs DNA |
Query= Contig-U12038-1 (Contig-U12038-1Q) /CSM_Contig/Contig-U12038-1Q.Seq.d
(1252 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ393590) Dictyostelium discoideum cDNA clone:dds31j23, 5' ... 1172 0.0 1
(BJ392383) Dictyostelium discoideum cDNA clone:dds27o09, 5' ... 1005 0.0 2
(BJ405490) Dictyostelium discoideum cDNA clone:dds31j23, 3' ... 545 0.0 2
(BJ404127) Dictyostelium discoideum cDNA clone:dds27o09, 3' ... 442 0.0 2
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 38 2e-06 22
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 36 1e-05 22
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 38 6e-05 20
(AX344558) Sequence 9 from Patent WO0200932. 36 1e-04 12
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 42 1e-04 11
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 34 0.001 21
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 36 0.001 14
(AE017243) Mycoplasma hyopneumoniae J, complete genome. 36 0.002 18
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 36 0.002 13
(AM422018) Candidatus Phytoplasma australiense complete genome. 36 0.002 21
(CP000728) Clostridium botulinum F str. Langeland, complete ... 36 0.003 20
(BJ338006) Dictyostelium discoideum cDNA clone:dda59c20, 5' ... 44 0.003 2
(AX392735) Sequence 25 from Patent WO0212526. 36 0.003 8
(AR707082) Sequence 25 from patent US 6933145. 36 0.003 8
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 34 0.005 19
(DW248180) pOP-EON00464_EST_C_1_pSK_SK EON (Oil Palm Embryoi... 54 0.013 1
(EY410093) pOP-EO07491_EST_C_1_pSK_SK EO (Oil Palm Embryoid)... 54 0.013 1
(CP000939) Clostridium botulinum B1 str. Okra, complete genome. 36 0.015 19
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 34 0.024 10
(AF538053) Monosiga brevicollis mitochondrion, complete genome. 36 0.025 9
(CP000727) Clostridium botulinum A str. Hall, complete genome. 36 0.025 21
(AL445563) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 30 0.029 18
(AC116921) Dictyostelium discoideum chromosome 2 map 4624505... 42 0.046 5
(AG225729) Lotus japonicus DNA, clone:LjB12n15_f. 40 0.047 2
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 36 0.073 21
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi... 34 0.077 17
(CP000726) Clostridium botulinum A str. ATCC 19397, complete... 36 0.084 20
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet... 40 0.084 18
(AE016821) Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 34 0.094 6
(AE017308) Mycoplasma mobile 163K complete genome. 32 0.12 19
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 46 0.15 22
(CP000552) Prochlorococcus marinus str. MIT 9515, complete g... 34 0.17 18
(CO276925) EK122417.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr... 40 0.17 2
(CU466275) Zebrafish DNA sequence from clone DKEY-156G19 in ... 40 0.19 5
(BX950217) Zebrafish DNA sequence from clone DKEY-192L17 in ... 50 0.20 1
(CT027709) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.20 1
(FH753366) OSB_1159005xo20f1.ab1 OSB_1159 Nicotiana tabacum ... 50 0.20 1
(BE167062) CM2-HT0502-170200-091-f03 HT0502 Homo sapiens cDN... 50 0.20 1
(BE167058) CM2-HT0502-170200-091-d06 HT0502 Homo sapiens cDN... 50 0.20 1
(BE167014) CM2-HT0502-140200-088-d08 HT0502 Homo sapiens cDN... 50 0.20 1
(CU468230) Acinetobacter baumannii str. SDF, complete genome. 50 0.20 1
(CU459141) Acinetobacter baumannii str. AYE, complete genome. 50 0.20 1
(CP000863) Acinetobacter baumannii ACICU, complete genome. 50 0.20 1
(CP000521) Acinetobacter baumannii ATCC 17978, complete genome. 50 0.20 1
(AC024991) Homo sapiens chromosome 3 clone RP11-177B6 map 3,... 38 0.21 6
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g... 36 0.22 20
(EF568108) Glossina pallidipes salivary gland hypertrophy vi... 38 0.25 11
(CZ990734) 207957 Tomato MboI BAC Library Solanum lycopersic... 40 0.27 2
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2... 36 0.30 12
(AX347136) Sequence 2207 from Patent WO0200928. 36 0.31 5
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 34 0.39 18
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 36 0.40 17
(EU004203) Saccharomyces cerevisiae YJM789 mitochondrion, co... 34 0.40 11
(Z97348) Plasmodium falciparum MAL3P1. 38 0.41 8
(AE017245) Mycoplasma synoviae 53, complete genome. 32 0.43 19
(AC116922) Dictyostelium discoideum chromosome 2 map 6061442... 32 0.45 8
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 32 0.45 18
(BX248583) Blochmannia floridanus complete genome. 40 0.49 16
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome. 32 0.49 13
(AC216676) Populus trichocarpa clone POP046-B08, complete se... 34 0.54 8
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 32 0.56 14
(CU571154) M.truncatula DNA sequence from clone MTH2-59O16 o... 36 0.60 8
(AE014838) Plasmodium falciparum 3D7 chromosome 11 section 3... 34 0.64 12
(CN515191) 3184.1 Tuber Skin Solanum tuberosum cDNA clone 31... 42 0.64 2
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8... 34 0.65 11
(ES745715) BGBV-aad75h02.b1 Snail_EST_pSMART Biomphalaria gl... 42 0.68 2
(AC177000) Strongylocentrotus purpuratus clone R3-1039N22, W... 48 0.68 7
(AC174288) Medicago truncatula clone mth2-33d1, WORKING DRAF... 34 0.74 5
(AX346066) Sequence 1137 from Patent WO0200928. 36 0.74 4
(AC093830) Homo sapiens BAC clone RP11-401G24 from 4, comple... 48 0.81 1
(AC200924) Strongylocentrotus purpuratus clone R3-1016I01, W... 48 0.81 1
(AC197331) Zea mays chromosome 8 clone ZMMBBb-497M7; ZMMBBb0... 48 0.81 1
(AC177438) Strongylocentrotus purpuratus clone R3-1030P10, W... 48 0.81 1
(AC021433) Homo sapiens chromosome 4 clone RP11-688K17 map 4... 48 0.81 1
(AC015996) Homo sapiens clone RP11-14A9, LOW-PASS SEQUENCE S... 48 0.81 1
(EI919326) VUH2-58K23TV VUUBBa (VUH2) Vigna unguiculata geno... 48 0.81 1
(CG205083) PUIJG24TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 48 0.81 1
(CG205081) PUIJG24TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 48 0.81 1
(CJ468995) Macaca fascicularis mRNA, clone: QnpA-18963, 5' e... 48 0.81 1
(CJ454413) Macaca fascicularis mRNA, clone: QflA-20152, 5' e... 48 0.81 1
(CJ450089) Macaca fascicularis mRNA, clone: QflA-15633, 5' e... 48 0.81 1
(CJ436356) Macaca fascicularis mRNA, clone: QccE-13462, 5' e... 48 0.81 1
(AM432498) Vitis vinifera, whole genome shotgun sequence, co... 46 0.85 5
(DN941826) 3184.2 Tuber Skin Solanum tuberosum cDNA clone 31... 42 0.91 2
(AL590309) Human DNA sequence *** SEQUENCING CANCELLED *** f... 40 0.92 6
(AC126077) Rattus norvegicus clone CH230-142H21, *** SEQUENC... 36 0.98 9
(CP000551) Prochlorococcus marinus str. AS9601, complete gen... 38 0.99 20
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 36 1.0 18
(DX558063) GH_MBb0081P19f GH_MBb Gossypium hirsutum genomic ... 40 1.1 3
(AF537106) Plasmodiophora brassicae H78 fragment unknown mit... 38 1.1 3
(AX344564) Sequence 15 from Patent WO0200932. 44 1.2 12
(BX901911) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 1.2 9
(CR382399) Plasmodium falciparum chromosome 6, complete sequ... 34 1.2 14
(AJ011856) Saccharomyces cerevisiae complete mitochondrial g... 32 1.2 9
(AC008595) Homo sapiens chromosome 16 clone CTA-420A11, WORK... 34 1.3 9
(CU633902) Zebrafish DNA sequence from clone CH1073-93E12 in... 38 1.3 4
>(BJ393590) Dictyostelium discoideum cDNA clone:dds31j23, 5' end,
single read.
Length = 591
Score = 1172 bits (591), Expect = 0.0
Identities = 591/591 (100%)
Strand = Plus / Plus
Query: 30 aggtatacatacaaatggaagtttaggtagtagtgttggtaataaatttagtaaattatt 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggtatacatacaaatggaagtttaggtagtagtgttggtaataaatttagtaaattatt 60
Query: 90 tggtatgggtagtaaacaaccaccatcatatcaaataccacaacccactacaccaccaat 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggtatgggtagtaaacaaccaccatcatatcaaataccacaacccactacaccaccaat 120
Query: 150 ggaaaagagaaaggataatttaaccgattgtttattagaacaattgttaaaagaagttaa 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggaaaagagaaaggataatttaaccgattgtttattagaacaattgttaaaagaagttaa 180
Query: 210 tttcaaaaaattaacaccacctcaagaaaagtatttattggattttttgaaaacaagtaa 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttcaaaaaattaacaccacctcaagaaaagtatttattggattttttgaaaacaagtaa 240
Query: 270 agaacttagatttgtatcattaaagggtgcgtcaacaataaaatatcaattttttaaatc 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaacttagatttgtatcattaaagggtgcgtcaacaataaaatatcaattttttaaatc 300
Query: 330 atttataattagagcgatcgttcgtatggatttatcagatagtagtattgattcagtttc 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atttataattagagcgatcgttcgtatggatttatcagatagtagtattgattcagtttc 360
Query: 390 acaagttggtttattaggaactacttcctcacctatagtaatgcactcattaactagact 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acaagttggtttattaggaactacttcctcacctatagtaatgcactcattaactagact 420
Query: 450 tcgtcttgatagatgttcatgtttatacatgataaaactaaatgctgatgcattaaaaga 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcgtcttgatagatgttcatgtttatacatgataaaactaaatgctgatgcattaaaaga 480
Query: 510 attaagttgtactgattgtccaatgttaaaaatcattgaattaaatacaccaaatttaga 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 attaagttgtactgattgtccaatgttaaaaatcattgaattaaatacaccaaatttaga 540
Query: 570 gattataaatttagaaaatggttcaatcattgattcaaaattttgggataa 620
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gattataaatttagaaaatggttcaatcattgattcaaaattttgggataa 591
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,628,494,975
Number of extensions: 108384187
Number of successful extensions: 8931386
Number of sequences better than 10.0: 289
Length of query: 1252
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1228
Effective length of database: 97,308,875,965
Effective search space: 119495299685020
Effective search space used: 119495299685020
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 1 |
| Homology vs Protein |
Query= Contig-U12038-1 (Contig-U12038-1Q) /CSM_Contig/Contig-U12038-1Q.Seq.d
(1252 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC115604_12(AC115604|pid:none) Dictyostelium discoideum chromoso... 77 2e-12
CP001102_1320(CP001102|pid:none) Candidatus Amoebophilus asiatic... 60 1e-07
AY649751_1(AY649751|pid:none) Wolbachia pipientis strain wAu ank... 58 8e-07
AC114265_1(AC114265|pid:none) Dictyostelium discoideum chromosom... 54 2e-05
(Q6AWW5) RecName: Full=Ankyrin repeat-containing protein At5g026... 49 3e-04
AL162971_21(AL162971|pid:none) Arabidopsis thaliana DNA chromoso... 49 3e-04
AK226242_1(AK226242|pid:none) Arabidopsis thaliana mRNA for anky... 49 3e-04
AE017196_489(AE017196|pid:none) Wolbachia endosymbiont of Drosop... 48 8e-04
AM999887_409(AM999887|pid:none) Wolbachia endosymbiont of Culex ... 47 0.001
AM999887_291(AM999887|pid:none) Wolbachia endosymbiont of Culex ... 47 0.001
CR628337_736(CR628337|pid:none) Legionella pneumophila str. Lens... 46 0.002
(Q5UR87) RecName: Full=Putative ankyrin repeat protein R634; &A... 46 0.002
BC154709_1(BC154709|pid:none) Xenopus tropicalis hypothetical pr... 46 0.003
BC070767_1(BC070767|pid:none) Xenopus laevis hypothetical protei... 46 0.003
CP000675_789(CP000675|pid:none) Legionella pneumophila str. Corb... 45 0.004
(Q9J516) RecName: Full=Putative ankyrin repeat protein FPV219; ... 45 0.004
AJ581527_211(AJ581527|pid:none) Fowlpox virus (isolate HP-438[Mu... 45 0.004
(Q4UMH6) RecName: Full=Putative ankyrin repeat protein RF_0381; ... 45 0.004
BT088796_1(BT088796|pid:none) Drosophila melanogaster RE03629 fu... 45 0.005
AY094999_1(AY094999|pid:none) Drosophila melanogaster GH01626 fu... 45 0.005
AE014296_1384(AE014296|pid:none) Drosophila melanogaster chromos... 45 0.005
AE014296_1383(AE014296|pid:none) Drosophila melanogaster chromos... 45 0.005
AE014296_1379(AE014296|pid:none) Drosophila melanogaster chromos... 45 0.005
AE014296_1377(AE014296|pid:none) Drosophila melanogaster chromos... 45 0.005
AE014296_1376(AE014296|pid:none) Drosophila melanogaster chromos... 45 0.005
AB478516_64(AB478516|pid:none) Wolbachia endosymbiont of Cadra c... 45 0.007
CP000777_1161(CP000777|pid:none) Leptospira biflexa serovar Pato... 44 0.012
AM999887_1278(AM999887|pid:none) Wolbachia endosymbiont of Culex... 44 0.012
FN357396_13(FN357396|pid:none) Schistosoma mansoni genome sequen... 43 0.027
AE017196_130(AE017196|pid:none) Wolbachia endosymbiont of Drosop... 43 0.027
CP001230_365(CP001230|pid:none) Persephonella marina EX-H1, comp... 43 0.027
AY318871_301(AY318871|pid:none) Canarypox virus strain ATCC VR-1... 42 0.035
(Q5F478) RecName: Full=Serine/threonine-protein phosphatase 6 re... 42 0.060
BC157918_1(BC157918|pid:none) Mus musculus ankyrin repeat domain... 41 0.079
AM999887_1376(AM999887|pid:none) Wolbachia endosymbiont of Culex... 41 0.079
(Q502K3) RecName: Full=Serine/threonine-protein phosphatase 6 re... 41 0.079
AM999887_637(AM999887|pid:none) Wolbachia endosymbiont of Culex ... 41 0.079
(B2RXR6) RecName: Full=Serine/threonine-protein phosphatase 6 re... 41 0.079
AM455078_1(AM455078|pid:none) Vitis vinifera contig VV78X174257.... 41 0.079
AY318871_229(AY318871|pid:none) Canarypox virus strain ATCC VR-1... 41 0.079
(Q5UQ36) RecName: Full=Putative ankyrin repeat protein R810; &A... 41 0.079
AK038343_1(AK038343|pid:none) Mus musculus 16 days neonate thymu... 41 0.079
BC063622_1(BC063622|pid:none) Homo sapiens ankyrin repeat domain... 41 0.10
CP000348_779(CP000348|pid:none) Leptospira borgpetersenii serova... 41 0.10
AK301209_1(AK301209|pid:none) Homo sapiens cDNA FLJ57209 complet... 41 0.10
AK097086_1(AK097086|pid:none) Homo sapiens cDNA FLJ39767 fis, cl... 41 0.10
(O90760) RecName: Full=Putative ankyrin repeat protein FPV031; ... 41 0.10
FN357453_3(FN357453|pid:none) Schistosoma mansoni genome sequenc... 41 0.10
AL662834_23(AL662834|pid:none) Human DNA sequence from clone XXb... 40 0.13
CR759784_7(CR759784|pid:none) Human DNA sequence from clone DAMC... 40 0.13
BC020970_1(BC020970|pid:none) Homo sapiens euchromatic histone-l... 40 0.13
BX005460_5(BX005460|pid:none) Human DNA sequence from clone DASS... 40 0.13
EF085840_1(EF085840|pid:none) Picea sitchensis clone WS0282_D22 ... 40 0.13
CU928174_634(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 40 0.13
AL773527_16(AL773527|pid:none) Pig DNA sequence from clone PigI-... 40 0.13
AK302904_1(AK302904|pid:none) Homo sapiens cDNA FLJ61730 complet... 40 0.13
BT077135_1(BT077135|pid:none) Caligus rogercresseyi clone crog-e... 40 0.13
CR759784_5(CR759784|pid:none) Human DNA sequence from clone DAMC... 40 0.13
EU709015_1(EU709015|pid:none) Sus scrofa euchromatic histone-lys... 40 0.13
BT076299_1(BT076299|pid:none) Caligus rogercresseyi clone crog-e... 40 0.13
AC108884_28(AC108884|pid:none) Oryza sativa (japonica cultivar-g... 40 0.13
CR759784_6(CR759784|pid:none) Human DNA sequence from clone DAMC... 40 0.13
S30385(S30385) G9a protein - human &X69838_1(X69838|pid:none) 40 0.13
AL662834_25(AL662834|pid:none) Human DNA sequence from clone XXb... 40 0.13
AL773527_14(AL773527|pid:none) Pig DNA sequence from clone PigI-... 40 0.13
EU219914_1(EU219914|pid:none) Sus scrofa euchromatic histone-lys... 40 0.13
AP008216_526(AP008216|pid:none) Oryza sativa (japonica cultivar-... 40 0.13
CP001102_794(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 40 0.13
AP008981_298(AP008981|pid:none) Orientia tsutsugamushi str. Iked... 40 0.18
AK145855_1(AK145855|pid:none) Mus musculus 13 days pregnant adul... 40 0.18
DQ084250_17(DQ084250|pid:none) Uncultured bacterium BAC10-10, co... 40 0.18
CR382135_537(CR382135|pid:none) Debaryomyces hansenii strain CBS... 40 0.18
(Q5UQX8) RecName: Full=Putative ankyrin repeat protein R880; &A... 40 0.18
CP000890_1538(CP000890|pid:none) Coxiella burnetii RSA 331, comp... 40 0.18
AY318871_295(AY318871|pid:none) Canarypox virus strain ATCC VR-1... 40 0.18
AC084406_2(AC084406|pid:none) Oryza sativa chromosome 3 BAC OSJN... 40 0.18
AB384179_1(AB384179|pid:none) Synthetic construct DNA, clone: pF... 40 0.23
AY354204_1(AY354204|pid:none) Homo sapiens retinoic acid induced... 40 0.23
AF155135_1(AF155135|pid:none) Homo sapiens novel retinal pigment... 40 0.23
CP000903_1989(CP000903|pid:none) Bacillus weihenstephanensis KBA... 40 0.23
CP001391_1057(CP001391|pid:none) Wolbachia sp. wRi, complete gen... 40 0.23
AY317139_1(AY317139|pid:none) Homo sapiens RAI14 isoform mRNA, c... 40 0.23
(Q5UPG5) RecName: Full=Putative ankyrin repeat protein L93; &AY... 39 0.30
(Q9CWU2) RecName: Full=Probable palmitoyltransferase ZDHHC13; ... 39 0.30
U21734_1(U21734|pid:none) Caenorhabditis elegans ankyrin-related... 39 0.30
AB385222_1(AB385222|pid:none) Synthetic construct DNA, clone: pF... 39 0.30
AK126888_1(AK126888|pid:none) Homo sapiens cDNA FLJ44940 fis, cl... 39 0.30
X56958_1(X56958|pid:none) Homo sapiens mRNA for ankyrin, Brank-2... 39 0.30
AK299767_1(AK299767|pid:none) Homo sapiens cDNA FLJ55887 partial... 39 0.30
AB002377_1(AB002377|pid:none) Homo sapiens mRNA for KIAA0379 pro... 39 0.30
AK295813_1(AK295813|pid:none) Homo sapiens cDNA FLJ54784 complet... 39 0.30
BC106948_1(BC106948|pid:none) Homo sapiens ankyrin repeat domain... 39 0.30
BX537758_1(BX537758|pid:none) Homo sapiens mRNA; cDNA DKFZp686H0... 39 0.30
U39847_1(U39847|pid:none) Caenorhabditis elegans AO13 ankyrin, A... 39 0.30
AB173935_1(AB173935|pid:none) Macaca fascicularis brain cDNA clo... 39 0.30
(Q8C8R3) RecName: Full=Ankyrin-2; AltName: Full=Brain ankyrin; 39 0.30
CP000487_1009(CP000487|pid:none) Campylobacter fetus subsp. fetu... 39 0.30
AK293770_1(AK293770|pid:none) Homo sapiens cDNA FLJ58725 complet... 39 0.30
AB364505_1(AB364505|pid:none) Sus scrofa RAI14 mRNA for retinoic... 39 0.30
U50071_2(U50071|pid:none) Caenorhabditis elegans cosmid B0350, c... 39 0.30
T15347(T15347;T15346;T15344;T15345;A57282;B57282;C57282) ankyrin... 39 0.30
(Q5UPB6) RecName: Full=Putative ankyrin repeat protein L45; &AY... 39 0.30
BX842650_292(BX842650|pid:none) Bdellovibrio bacteriovorus compl... 39 0.30
CP000675_2194(CP000675|pid:none) Legionella pneumophila str. Cor... 39 0.30
(O15084) RecName: Full=Serine/threonine-protein phosphatase 6 re... 39 0.30
U50071_4(U50071|pid:none) Caenorhabditis elegans cosmid B0350, c... 39 0.30
AM997270_1(AM997270|pid:none) Synthetic construct for CD4-specif... 39 0.39
AB005249_8(AB005249|pid:none) Arabidopsis thaliana genomic DNA, ... 39 0.39
(Q5UP39) RecName: Full=Putative ankyrin repeat protein R873; &A... 39 0.39
AL133421_4(AL133421|pid:none) Arabidopsis thaliana DNA chromosom... 39 0.39
(Q5UPD9) RecName: Full=Putative ankyrin repeat protein L66; &AY... 39 0.39
BT076099_1(BT076099|pid:none) Caligus rogercresseyi clone crog-e... 39 0.39
CP001291_2104(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 39 0.39
(Q8IUH4) RecName: Full=Probable palmitoyltransferase ZDHHC13; ... 39 0.51
AK001714_1(AK001714|pid:none) Homo sapiens cDNA FLJ10852 fis, cl... 39 0.51
AY318871_40(AY318871|pid:none) Canarypox virus strain ATCC VR-11... 39 0.51
AK291348_1(AK291348|pid:none) Homo sapiens cDNA FLJ77545 complet... 39 0.51
AB097014_1(AB097014|pid:none) Homo sapiens mRNA for putative NFk... 39 0.51
CP000743_1233(CP000743|pid:none) Methanococcus aeolicus Nankai-3... 39 0.51
(Q5NVB9) RecName: Full=Probable palmitoyltransferase ZDHHC13; ... 39 0.51
CP000284_1029(CP000284|pid:none) Methylobacillus flagellatus KT,... 39 0.51
AP009179_2277(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic ... 38 0.67
BC083261_1(BC083261|pid:none) Danio rerio ankyrin 2, neuronal, m... 38 0.67
AB478516_58(AB478516|pid:none) Wolbachia endosymbiont of Cadra c... 38 0.67
AY318871_314(AY318871|pid:none) Canarypox virus strain ATCC VR-1... 38 0.67
AY195853_1(AY195853|pid:none) Synthetic construct ankyrin repeat... 38 0.67
(Q9J5H7) RecName: Full=Putative ankyrin repeat protein FPV024; ... 38 0.87
(Q505D1) RecName: Full=Serine/threonine-protein phosphatase 6 re... 38 0.87
AM494475_1172(AM494475|pid:none) Orientia tsutsugamushi Boryong ... 38 0.87
CP000492_1253(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 38 0.87
AJ581527_23(AJ581527|pid:none) Fowlpox virus (isolate HP-438[Mun... 38 0.87
CP000896_840(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 37 1.1
CP001102_1191(CP001102|pid:none) Candidatus Amoebophilus asiatic... 37 1.1
BT066757_1(BT066757|pid:none) Zea mays full-length cDNA clone ZM... 37 1.1
(Q5UQZ7) RecName: Full=Putative ankyrin repeat protein R901; &A... 37 1.1
CP001357_1989(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 37 1.1
(A6NK59) RecName: Full=Ankyrin repeat and SOCS box-containing pr... 37 1.1
AP008211_750(AP008211|pid:none) Oryza sativa (japonica cultivar-... 37 1.1
AY886529_1(AY886529|pid:none) Rattus norvegicus membrane-associa... 37 1.1
AF071527_8(AF071527|pid:none) Arabidopsis thaliana BAC F9H3, fro... 37 1.5
AE009951_764(AE009951|pid:none) Fusobacterium nucleatum subsp. n... 37 1.5
AP004130_1(AP004130|pid:none) Oryza sativa Japonica Group genomi... 37 1.5
FJ446580_4(FJ446580|pid:none) Arabidopsis thaliana disease resis... 37 1.5
AM397079_1(AM397079|pid:none) Wolbachia endosymbiont of Culex pi... 37 1.5
U65916_1(U65916|pid:none) Rattus norvegicus ankyrin mRNA, membra... 37 1.5
CP000859_2891(CP000859|pid:none) Desulfococcus oleovorans Hxd3, ... 37 1.5
AY326424_1(AY326424|pid:none) Synthetic construct ankyrin repeat... 37 1.5
CP001357_2153(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 37 1.5
AM494475_476(AM494475|pid:none) Orientia tsutsugamushi Boryong c... 37 1.9
AM999887_217(AM999887|pid:none) Wolbachia endosymbiont of Culex ... 37 1.9
AY649750_1(AY649750|pid:none) Wolbachia pipientis strain wAu ank... 37 1.9
CP000393_832(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 37 1.9
CR628336_2062(CR628336|pid:none) Legionella pneumophila str. Par... 37 1.9
AM494475_1753(AM494475|pid:none) Orientia tsutsugamushi Boryong ... 37 1.9
AJ721120_1(AJ721120|pid:none) Gallus gallus mRNA for hypothetica... 36 2.5
AC144343_14(AC144343|pid:none) Medicago truncatula clone mth2-12... 36 2.5
BX537917_1(BX537917|pid:none) Homo sapiens mRNA; cDNA DKFZp686P1... 36 2.5
AP000386_5(AP000386|pid:none) Arabidopsis thaliana genomic DNA, ... 36 2.5
(Q60J38) RecName: Full=Ankyrin repeat and KH domain-containing p... 36 2.5
A55575(A55575) ankyrin 3, long splice form - human &U13616_1(U1... 36 2.5
CP001102_362(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 36 2.5
AB036666_28(AB036666|pid:none) Wolbachia phage WO DNA, prophage ... 36 2.5
CR382128_834(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 36 3.3
DQ644021_1(DQ644021|pid:none) Macaca mulatta cell-line FrhK4 RNa... 36 3.3
EF694539_1(EF694539|pid:none) Brachyspira pilosicoli strain 95/1... 36 3.3
CP000821_4150(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 36 3.3
(Q9SMY8) RecName: Full=F-box/LRR-repeat protein 15; 36 3.3
AE014185_100(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 36 3.3
CP000849_1219(CP000849|pid:none) Rickettsia bellii OSU 85-389, c... 36 3.3
AP007154_471(AP007154|pid:none) Aspergillus oryzae RIB40 genomic... 36 3.3
(Q5UNU1) RecName: Full=Putative ankyrin repeat protein L675; &A... 36 3.3
BC045958_1(BC045958|pid:none) Danio rerio ankyrin repeat and SOC... 36 3.3
AL035525_14(AL035525|pid:none) Arabidopsis thaliana DNA chromoso... 36 3.3
CP000393_848(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 36 3.3
AB036665_1(AB036665|pid:none) Wolbachia phage WO DNA, ISW1 inser... 36 3.3
(Q1RK13) RecName: Full=Putative ankyrin repeat protein RBE_0220;... 36 3.3
AM920437_1577(AM920437|pid:none) Penicillium chrysogenum Wiscons... 36 3.3
CR382136_292(CR382136|pid:none) Debaryomyces hansenii strain CBS... 35 4.3
AK098479_1(AK098479|pid:none) Homo sapiens cDNA FLJ25613 fis, cl... 35 4.3
AP008981_1453(AP008981|pid:none) Orientia tsutsugamushi str. Ike... 35 4.3
AK125379_1(AK125379|pid:none) Homo sapiens cDNA FLJ43389 fis, cl... 35 4.3
(Q5UQI7) RecName: Full=Putative ankyrin repeat protein R838; &A... 35 4.3
CP001102_210(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 35 4.3
AX817257_1(AX817257|pid:none) Sequence 5 from Patent WO02081517. 35 4.3
AM999887_461(AM999887|pid:none) Wolbachia endosymbiont of Culex ... 35 4.3
CP000239_2535(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 35 4.3
AP008981_1730(AP008981|pid:none) Orientia tsutsugamushi str. Ike... 35 4.3
AB190990_1(AB190990|pid:none) Homo sapiens ANKRD33 mRNA for anky... 35 4.3
AP008981_153(AP008981|pid:none) Orientia tsutsugamushi str. Iked... 35 4.3
AM920436_1891(AM920436|pid:none) Penicillium chrysogenum Wiscons... 35 4.3
(Q1RHT6) RecName: Full=Putative ankyrin repeat protein RBE_0997;... 35 4.3
AY318871_296(AY318871|pid:none) Canarypox virus strain ATCC VR-1... 35 5.6
AB020746_10(AB020746|pid:none) Arabidopsis thaliana genomic DNA,... 35 5.6
(Q9Z2F6) RecName: Full=B-cell lymphoma 3-encoded protein homolog... 35 5.6
(P17221) RecName: Full=Sex-determining protein fem-1; AltName: F... 35 5.6
AX970442_1(AX970442|pid:none) Sequence 1245 from Patent EP1104808. 35 5.6
T27499(T27499)hypothetical protein ZC15.7 - Caenorhabditis elegans 35 5.6
AK228948_1(AK228948|pid:none) Arabidopsis thaliana mRNA for hypo... 35 5.6
AM920431_779(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 35 5.6
(Q5UPE3) RecName: Full=Putative ankyrin repeat protein L62; &AY... 35 5.6
AE017125_126(AE017125|pid:none) Helicobacter hepaticus ATCC 5144... 35 5.6
AK100041_1(AK100041|pid:none) Oryza sativa Japonica Group cDNA c... 35 5.6
AF360342_1(AF360342|pid:none) Arabidopsis thaliana putative rubi... 35 5.6
BC108626_1(BC108626|pid:none) Xenopus laevis ankyrin repeat doma... 35 5.6
AE010300_1331(AE010300|pid:none) Leptospira interrogans serovar ... 35 5.6
AY266681_1(AY266681|pid:none) Canis familiaris heart myotrophin ... 35 5.6
AK002620_1(AK002620|pid:none) Mus musculus adult male kidney cDN... 35 5.6
(P62774) RecName: Full=Myotrophin; AltName: Full=Protein V-1; Al... 35 5.6
AP008981_1032(AP008981|pid:none) Orientia tsutsugamushi str. Ike... 35 5.6
DQ000582_1(DQ000582|pid:none) Synthetic construct clone PSF:1104... 35 5.6
CP000111_1203(CP000111|pid:none) Prochlorococcus marinus str. MI... 35 5.6
DQ645956_1(DQ645956|pid:none) Caenorhabditis elegans molting pro... 35 5.6
AY085374_1(AY085374|pid:none) Arabidopsis thaliana clone 148454 ... 35 5.6
AK141233_1(AK141233|pid:none) Mus musculus ES cells cDNA, RIKEN ... 35 7.4
Z70686_3(Z70686|pid:none) Caenorhabditis elegans Cosmid R10H10, ... 35 7.4
AF063866_10(AF063866|pid:none) Melanoplus sanguinipes entomopoxv... 35 7.4
Z70310_9(Z70310|pid:none) Caenorhabditis elegans Cosmid R11A8, c... 35 7.4
AP008981_602(AP008981|pid:none) Orientia tsutsugamushi str. Iked... 35 7.4
FN357714_16(FN357714|pid:none) Schistosoma mansoni genome sequen... 35 7.4
EF467993_1(EF467993|pid:none) Macaca mulatta clone 1 ribonucleas... 35 7.4
CP001391_569(CP001391|pid:none) Wolbachia sp. wRi, complete geno... 35 7.4
CP000086_2119(CP000086|pid:none) Burkholderia thailandensis E264... 35 7.4
AL662834_27(AL662834|pid:none) Human DNA sequence from clone XXb... 35 7.4
CP001391_88(CP001391|pid:none) Wolbachia sp. wRi, complete genome. 35 7.4
AE014187_220(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 35 7.4
AM397075_1(AM397075|pid:none) Wolbachia endosymbiont of Culex pi... 35 7.4
(Q9WV06) RecName: Full=Ankyrin repeat domain-containing protein ... 35 7.4
CP000570_2257(CP000570|pid:none) Burkholderia pseudomallei 668 c... 34 9.6
BC098394_1(BC098394|pid:none) Homo sapiens tankyrase, TRF1-inter... 34 9.6
AK302534_1(AK302534|pid:none) Homo sapiens cDNA FLJ50918 complet... 34 9.6
(Q8VD46) RecName: Full=Ankyrin repeat, SAM and basic leucine zip... 34 9.6
U44916_1(U44916|pid:none) Trichomonas vaginalis unidentified gen... 34 9.6
CP000568_2264(CP000568|pid:none) Clostridium thermocellum ATCC 2... 34 9.6
AK048860_1(AK048860|pid:none) Mus musculus 0 day neonate cerebel... 34 9.6
AM910990_101(AM910990|pid:none) Plasmodium knowlesi strain H chr... 34 9.6
FM992688_1211(FM992688|pid:none) Candida dubliniensis CD36 chrom... 34 9.6
CR954217_44(CR954217|pid:none) Ostreococcus tauri strain OTTH059... 34 9.6
(Q5UPU4) RecName: Full=Putative ankyrin repeat protein R267; &A... 34 9.6
(Q9D2J7) RecName: Full=Ankyrin repeat domain-containing protein ... 34 9.6
BC057370_1(BC057370|pid:none) Mus musculus tankyrase, TRF1-inter... 34 9.6
(Q5AL27) RecName: Full=Palmitoyltransferase AKR1; EC=2.... 34 9.6
(Q5UQJ2) RecName: Full=Putative ankyrin repeat protein R863; &A... 34 9.6
CP001037_81(CP001037|pid:none) Nostoc punctiforme PCC 73102, com... 34 9.6
AM236080_2952(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 34 9.6
(Q54BA2) RecName: Full=Ankyrin repeat, bromo and BTB domain-cont... 34 9.6
CP000685_1182(CP000685|pid:none) Flavobacterium johnsoniae UW101... 34 9.6
(P0C9M1) RecName: Full=Protein MGF 360-2L; &(P0C9R9) RecName: Fu 34 9.6
AY142108_1(AY142108|pid:none) Gallus gallus tankyrase 1 mRNA, co... 34 9.6
AP008981_1118(AP008981|pid:none) Orientia tsutsugamushi str. Ike... 34 9.6
AF082556_1(AF082556|pid:none) Homo sapiens TRF1-interacting anky... 34 9.6
AK118494_1(AK118494|pid:none) Arabidopsis thaliana At4g19150 mRN... 34 9.6
>AC115604_12(AC115604|pid:none) Dictyostelium discoideum chromosome 2
map 4354771-4414991 strain AX4, complete sequence.
Length = 1849
Score = 76.6 bits (187), Expect = 2e-12
Identities = 53/165 (32%), Positives = 88/165 (53%)
Frame = +1
Query: 163 DNLTDCLLEQLLKEVNFKKLTPPQEKYLLDFLKTSKELRFVSLKGASTIKYQFFKSFIIR 342
D+++D L + LK+ +F LT Q + + LK S+ + + +K +K + FK F +
Sbjct: 1262 DSISDLDLTEFLKKTSFDNLTKVQSNKIFETLK-SRSINIIHIKNCEYLKLRIFKHFNLE 1320
Query: 343 AIVRMDLSDSSIDSVSQVGLLGTTSSPIVMHSLTRLRLDRCSCLYMIKLNADALKELSCT 522
+ +DLS + + GL ++ + + SL L + C L +KL AD L+ L +
Sbjct: 1321 KLTEIDLSGCTKLKCIRNGL----NTTLTLASLKILIVRNCIKLMDLKLKADNLETLIAS 1376
Query: 523 DCPMLKIIELNTPNLEIINLENGSIIDSKFWDNLTKQTNLIKLNI 657
DC LK E+N+PNL+I+NL N SI + ++ L K L L+I
Sbjct: 1377 DCFKLKEFEVNSPNLKILNL-NSSINNPLIFNCLNKYKKLTFLDI 1420
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,554,602,205
Number of extensions: 25626322
Number of successful extensions: 71495
Number of sequences better than 10.0: 251
Number of HSP's gapped: 71221
Number of HSP's successfully gapped: 300
Length of query: 417
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 286
Effective length of database: 627,191,635
Effective search space: 179376807610
Effective search space used: 179376807610
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
2 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |