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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U12006-1
Contig ID Contig-U12006-1
Contig update 2002.12.18
Contig sequence 
>Contig-U12006-1 (Contig-U12006-1Q) /CSM_Contig/Contig-U12006-1Q.Seq.d
ATTAAACACATACACACACTACATCCAGAGTAAAATTTTTTTTTTATTCT
TTTTTATTTTCTATTCCATTTTTATTACAAAACAAAAAAAAAAAAACCAA
AAAAATTTTTTTTGGTTTNANTTAAAATTTTGGCAAAANTAAANTAAACC
AAACCAAACCAAATTTTAAAAAACCAAAATTAAAAANTAATTTTTTTAAA
AAAAAAAAAAAANTAAANNAAA----------ATTTTTTAATTTCCTTTT
TTCTAATTTTTTTTTTATTTTTTTTATTTTTTTCAATATATAACCCTTAT
ACCATTAATATATATAATATTACACAAAAAAAGTAGAACCAAATAAAATT
AAAAGAAATCTTAAAAATATTAAAAGAAATGGAATCAACAGCATCAACAA
GCGATAGTGCATCCGCCATAACCACTGGTTTAAGTGAAGTAGACATTAAT
CAACAATCTCCACCAATTATACTTAAAGAGGGTGAGATTTTTGACCCATT
AAAAAATTTAAATGAAAAACAATTAGAAGCATTCAAAGAGATTAAATCAA
ATTTCTCAGATTTAACTGATCCAACTGATATTGCATTTTGTACAGATATG
TGTTTTTTAAGATATTTAAGAGCTAGAAATTATATTGTTTCAAAATCTGA
AAAAATGTTAAGAGACACATTAGAATGGAGAAAGAAATTTAGACCACAAG
ATATCCAATTAGGTGGTGATATTAGAGAAATTGGTTCAGCTGGTTGTGTT
TATGTAAATAAAAGAGACAAAAAAGGAAGACCAATCATTTTTGCAGTTCC
AAGAAATGATACACTCAAAAATGTACCAAGTGAACTCAAATTTAAAAATT
TAGTTTATTGGTTAGAACAAGGTTTCAGTCGTATGGATGAACCAAAAGGT
ATTGAACAATTTTGTTTCATTGTCGATTATAAAGATTTCGGTAGTGGTAA
TATGGATATGAAAACAAATTTAGAAGCTATGCACTTTTTATTAGATCATT
GTCCAGAAAGAATGGGTCAATCTTTATTCCTTGATCCACCAGCACTCTTT
TGGTTTGCATGGAAAATTATTTCACCATTTTTAAATGAAGTTACACTTTC
AAAAGTTAGATTTATAAATAGTAAAAAAGTTGATGGAAAAAGAACTTTTG
CAGAATTATTAGAATATGTTGATATTGAAAATTTGGAACAAAATTTAGGT
GGTAATTTAGATTATAATTACAATATCGATGAATACTTGAAAGAAAATCC
AGATCCAATCGTAGATACTCCACCAATCACTTTTTCAACTGAAACAGATT
CAAAAAAACAAAAGAAAGAAAAGAAAAAAGAAGAAAAAGAAAAGAAAAAA
GAAGAAAAAGAAAAGAAAAAAGAAGAAAAAGAAGAGAAAAAGAAAGAAAA
AGAAGAGAAAAAGAAATTAAAGAAAGAAGCATCTTTTACTAAACAACAAG
AAAATGCTGATGAAGTTGATTAAATTTAATTTAATTTTTGTTACACCTTT
TTTAAAAAAACATTG
Gap gap included
Contig length 1505
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 3804105
End point 3805613
Strand (PLUS/MINUS) PLUS
Number of clones 12
Number of EST 15
Link to clone list U12006
List of clone(s) 

est1=SFJ296F,1,207
est2=VFI826F,21,222
est3=VFJ893F,223,683
est4=VHN757E,278,1302
est5=CFF888Z,512,1114
est6=SFK667Z,545,1147
est7=SFL124Z,561,1120
est8=SFF835Z,642,1090
est9=SFJ279Z,644,1046
est10=VFI826Z,644,1128
est11=SFJ296Z,646,1009
est12=VSK346E,714,1510
est13=VFJ364Z,776,1506
est14=VFD892Z,823,1317
est15=VFJ893Z,823,1448
Translated Amino Acid sequence 
*ththttsrvkfffysflfsipfllqnkkkktkkiffgxx*NFGKXKXNQTKPNFKKPKL
KXNFFKKKKKXXX---

---FLISFFLIFFLFFLFFSIYNPYTINIYNITQKK*nqiklkeilkilkemestastsd
sasaittglsevdinqqsppiilkegeifdplknlnekqleafkeiksnfsdltdptdia
fctdmcflrylrarnyivsksekmlrdtlewrkkfrpqdiqlggdireigsagcvyvnkr
dkkgrpiifavprndtlknvpselkfknlvywleqgfsrmdepkgieqfcfivdykdfgs
gnmdmktnleamhflldhcpermgqslfldppalfwfawkiispflnevtlskvrfinsk
kvdgkrtfaelleyvdienleqnlggnldynynideylkenpdpivdtppitfstetdsk
kqkkekkkeekekkkeekekkkeekeekkkekeekkklkkeasftkqqenadevd*i*fn
fcytffkktl
Translated Amino Acid sequence (All Frames) 
Frame A:
ikhihtlhpe*nfffilfyflfhfyyktkkkkpkkfflvxxkilakxx*tkpnqilknqn
*kxiflkkkkx*xk---

---if*fpff*fffyffyffqyitlipliyiilhkksrtk*n*kks*ky*kkwnqqhqqa
ivhpp*plv*vk*tlinnlhqlylkrvrflth*ki*mknn*khskrlnqisqi*liqlil
hfvqicvf*di*eleiilfqnlkkc*eth*ngernldhkisn*vvileklvqlvvfm*ik
etkkedqsflqfqemihskmyqvnsnlki*fig*nkvsvvwmnqkvlnnfvslsiikisv
vviwi*kqi*klctfy*iivqkewvnlyslihqhsfglhgklfhhf*mklhfqkldl*iv
kklmekellqny*nmlilkiwnki*vvi*iiitismnt*kkiqiqs*ilhqslfqlkqiq
knkrkkrkkkkkkrkkkkkkrkkkkkkrkrkkkkrkrn*rkkhlllnnkkmlmklikfnl
ifvtpflkkh

Frame B:
lntythyiqskifflfffifysifitkqkkknqknffwfxlkfwqx*xkpnqtkf*ktki
kx*ff*kkkkxkx---

---ffnflfsnfffiffiffni*plyh*yi*yytkkvepnkikrnlknikrnginsinkr
*cirhnhwfk*srh*stistnyt*rg*df*pikkfk*ktirsiqrd*ikflrfn*sn*yc
ilyryvffkifks*klycfki*knvkrhirmekei*ttrypirw*y*rnwfswlclck*k
rqkrktnhfcsskk*ytqkctk*tqi*kfsllvrtrfqsyg*tkry*tilfhcrl*rfr*
w*ygyenkfrsyalfirslsrkngsifip*ststllvcmenyftifk*sytfks*iyk**
ks*wkknfcriiric*y*kfgtkfrw*frl*lqyr*ilerksrsnrrystnhffn*nrfk
ktkerkekrrkrkekrrkrkekrrkrrekerkrrekeikersify*ttrkc**s*lnli*
fllhlf*kni

Frame C:
*ththttsrvkfffysflfsipfllqnkkkktkkiffgxx*NFGKXKXNQTKPNFKKPKL
KXNFFKKKKKXXX---

---FLISFFLIFFLFFLFFSIYNPYTINIYNITQKK*nqiklkeilkilkemestastsd
sasaittglsevdinqqsppiilkegeifdplknlnekqleafkeiksnfsdltdptdia
fctdmcflrylrarnyivsksekmlrdtlewrkkfrpqdiqlggdireigsagcvyvnkr
dkkgrpiifavprndtlknvpselkfknlvywleqgfsrmdepkgieqfcfivdykdfgs
gnmdmktnleamhflldhcpermgqslfldppalfwfawkiispflnevtlskvrfinsk
kvdgkrtfaelleyvdienleqnlggnldynynideylkenpdpivdtppitfstetdsk
kqkkekkkeekekkkeekekkkeekeekkkekeekkklkkeasftkqqenadevd*i*fn
fcytffkktl
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U12006-1 (Contig-U12006-1Q)
/CSM_Contig/Contig-U12006-1Q.Seq.d
         (1515 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U12006-1 (Contig-U12006-1Q) /CSM_Contig/Conti...  1836  0.0
Contig-U12497-1 (Contig-U12497-1Q) /CSM_Contig/Conti...    38  0.027
Contig-U10621-1 (Contig-U10621-1Q) /CSM_Contig/Conti...    38  0.027
Contig-U08330-1 (Contig-U08330-1Q) /CSM_Contig/Conti...    38  0.027
Contig-U02757-1 (Contig-U02757-1Q) /CSM_Contig/Conti...    38  0.027
Contig-U02153-1 (Contig-U02153-1Q) /CSM_Contig/Conti...    38  0.027
Contig-U14828-1 (Contig-U14828-1Q) /CSM_Contig/Conti...    36  0.11
Contig-U14530-1 (Contig-U14530-1Q) /CSM_Contig/Conti...    36  0.11
Contig-U13872-1 (Contig-U13872-1Q) /CSM_Contig/Conti...    36  0.11
Contig-U06837-1 (Contig-U06837-1Q) /CSM_Contig/Conti...    36  0.11

>Contig-U12006-1 (Contig-U12006-1Q) /CSM_Contig/Contig-U12006-1Q.Seq.d
          Length = 1515

 Score = 1836 bits (926), Expect = 0.0
 Identities = 926/926 (100%)
 Strand = Plus / Plus

                                                                        
Query: 376  gaaatggaatcaacagcatcaacaagcgatagtgcatccgccataaccactggtttaagt 435
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376  gaaatggaatcaacagcatcaacaagcgatagtgcatccgccataaccactggtttaagt 435

                                                                        
Query: 436  gaagtagacattaatcaacaatctccaccaattatacttaaagagggtgagatttttgac 495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436  gaagtagacattaatcaacaatctccaccaattatacttaaagagggtgagatttttgac 495

                                                                        
Query: 496  ccattaaaaaatttaaatgaaaaacaattagaagcattcaaagagattaaatcaaatttc 555
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496  ccattaaaaaatttaaatgaaaaacaattagaagcattcaaagagattaaatcaaatttc 555

                                                                        
Query: 556  tcagatttaactgatccaactgatattgcattttgtacagatatgtgttttttaagatat 615
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556  tcagatttaactgatccaactgatattgcattttgtacagatatgtgttttttaagatat 615

                                                                        
Query: 616  ttaagagctagaaattatattgtttcaaaatctgaaaaaatgttaagagacacattagaa 675
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616  ttaagagctagaaattatattgtttcaaaatctgaaaaaatgttaagagacacattagaa 675

                                                                        
Query: 676  tggagaaagaaatttagaccacaagatatccaattaggtggtgatattagagaaattggt 735
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676  tggagaaagaaatttagaccacaagatatccaattaggtggtgatattagagaaattggt 735

                                                                        
Query: 736  tcagctggttgtgtttatgtaaataaaagagacaaaaaaggaagaccaatcatttttgca 795
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736  tcagctggttgtgtttatgtaaataaaagagacaaaaaaggaagaccaatcatttttgca 795

                                                                        
Query: 796  gttccaagaaatgatacactcaaaaatgtaccaagtgaactcaaatttaaaaatttagtt 855
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796  gttccaagaaatgatacactcaaaaatgtaccaagtgaactcaaatttaaaaatttagtt 855

                                                                        
Query: 856  tattggttagaacaaggtttcagtcgtatggatgaaccaaaaggtattgaacaattttgt 915
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856  tattggttagaacaaggtttcagtcgtatggatgaaccaaaaggtattgaacaattttgt 915

                                                                        
Query: 916  ttcattgtcgattataaagatttcggtagtggtaatatggatatgaaaacaaatttagaa 975
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916  ttcattgtcgattataaagatttcggtagtggtaatatggatatgaaaacaaatttagaa 975

                                                                        
Query: 976  gctatgcactttttattagatcattgtccagaaagaatgggtcaatctttattccttgat 1035
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976  gctatgcactttttattagatcattgtccagaaagaatgggtcaatctttattccttgat 1035

                                                                        
Query: 1036 ccaccagcactcttttggtttgcatggaaaattatttcaccatttttaaatgaagttaca 1095
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1036 ccaccagcactcttttggtttgcatggaaaattatttcaccatttttaaatgaagttaca 1095

                                                                        
Query: 1096 ctttcaaaagttagatttataaatagtaaaaaagttgatggaaaaagaacttttgcagaa 1155
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1096 ctttcaaaagttagatttataaatagtaaaaaagttgatggaaaaagaacttttgcagaa 1155

                                                                        
Query: 1156 ttattagaatatgttgatattgaaaatttggaacaaaatttaggtggtaatttagattat 1215
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1156 ttattagaatatgttgatattgaaaatttggaacaaaatttaggtggtaatttagattat 1215

                                                                        
Query: 1216 aattacaatatcgatgaatacttgaaagaaaatccagatccaatcgtagatactccacca 1275
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1216 aattacaatatcgatgaatacttgaaagaaaatccagatccaatcgtagatactccacca 1275

                                      
Query: 1276 atcactttttcaactgaaacagattc 1301
            ||||||||||||||||||||||||||
Sbjct: 1276 atcactttttcaactgaaacagattc 1301


 Score =  147 bits (74), Expect = 4e-35
 Identities = 74/74 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1430 catcttttactaaacaacaagaaaatgctgatgaagttgattaaatttaatttaattttt 1489
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1430 catcttttactaaacaacaagaaaatgctgatgaagttgattaaatttaatttaattttt 1489

                          
Query: 1490 gttacacctttttt 1503
            ||||||||||||||
Sbjct: 1490 gttacacctttttt 1503


 Score = 81.8 bits (41), Expect = 2e-15
 Identities = 41/41 (100%)
 Strand = Plus / Plus

                                                    
Query: 284 caatatataacccttataccattaatatatataatattaca 324
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 caatatataacccttataccattaatatatataatattaca 324


 Score = 69.9 bits (35), Expect = 8e-12
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                             
Query: 1  attaaacacatacacacactacatccagagtaaaa 35
          |||||||||||||||||||||||||||||||||||
Sbjct: 1  attaaacacatacacacactacatccagagtaaaa 35


 Score = 36.2 bits (18), Expect = 0.11
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                            
Query: 61 ctattccatttttattac 78
          ||||||||||||||||||
Sbjct: 61 ctattccatttttattac 78


>Contig-U12497-1 (Contig-U12497-1Q) /CSM_Contig/Contig-U12497-1Q.Seq.d
          Length = 1143

 Score = 38.2 bits (19), Expect = 0.027
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 510 aaatgaaaaacaattagaa 528
           |||||||||||||||||||
Sbjct: 897 aaatgaaaaacaattagaa 915


>Contig-U10621-1 (Contig-U10621-1Q) /CSM_Contig/Contig-U10621-1Q.Seq.d
          Length = 728

 Score = 38.2 bits (19), Expect = 0.027
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 1214 ataattacaatatcgatgaatac 1236
            |||||||||||| ||||||||||
Sbjct: 632  ataattacaataccgatgaatac 610


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 19,283
Number of Sequences: 6905
Number of extensions: 19283
Number of successful extensions: 2406
Number of sequences better than 10.0: 309
length of query: 1515
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1499
effective length of database: 5,564,391
effective search space: 8341022109
effective search space used: 8341022109
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.28
Homology vs DNA 
Query= Contig-U12006-1 (Contig-U12006-1Q) /CSM_Contig/Contig-U12006-1Q.Seq.d
         (1515 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(U82515) Dictyostelium discoideum random slug cDNA5 protein ...  1796   0.0    1
(BJ401225) Dictyostelium discoideum cDNA clone:dds22e18, 3' ...  1185   0.0    1
(BJ372521) Dictyostelium discoideum cDNA clone:ddc12p22, 3' ...  1185   0.0    1
(BJ445118) Dictyostelium discoideum cDNA clone:ddv58b15, 3' ...  1154   0.0    2
(BJ432762) Dictyostelium discoideum cDNA clone:ddv19p15, 3' ...   963   0.0    4
(BJ401426) Dictyostelium discoideum cDNA clone:dds23o05, 3' ...   888   0.0    2
(BJ426291) Dictyostelium discoideum cDNA clone:ddv58b15, 5' ...   817   0.0    4
(BJ432295) Dictyostelium discoideum cDNA clone:ddv18d08, 3' ...   954   0.0    1
(BJ433133) Dictyostelium discoideum cDNA clone:ddv20j24, 3' ...   934   0.0    2
(BJ430803) Dictyostelium discoideum cDNA clone:ddv8h24, 3' e...   934   0.0    1
(AU271041) Dictyostelium discoideum vegetative cDNA clone:VS...   932   0.0    1
(AU271042) Dictyostelium discoideum vegetative cDNA clone:VS...   777   0.0    4
(BJ398399) Dictyostelium discoideum cDNA clone:dds12f10, 3' ...   886   0.0    1
(BJ401946) Dictyostelium discoideum cDNA clone:dds19m20, 3' ...   795   0.0    1
(BJ401959) Dictyostelium discoideum cDNA clone:dds19o24, 3' ...   722   0.0    1
(BJ414930) Dictyostelium discoideum cDNA clone:ddv20j24, 5' ...   615   0.0    2
(BJ389755) Dictyostelium discoideum cDNA clone:dds19o24, 5' ...    70   3e-07  1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    36   0.002  16
(AC133862) Medicago truncatula clone mth2-30d7, complete seq...    54   0.016  1
(AC124957) Medicago truncatula clone mth2-15k14, complete se...    54   0.016  1
(AC221865) Bos taurus clone CH240-380A8, WORKING DRAFT SEQUE...    54   0.016  1
(AM455031) Vitis vinifera contig VV78X072688.11, whole genom...    38   0.024  5
(AL032647) Caenorhabditis elegans YAC Y57A10B.                     40   0.040  3
(EK174761) 1095458093056 Global-Ocean-Sampling_GS-31-01-01-1...    52   0.063  1
(EJ115172) 1092343281233 Global-Ocean-Sampling_GS-27-01-01-1...    52   0.063  1
(AL514925) human full-length cDNA 3-PRIME end of clone CL0BB...    52   0.063  1
(BU589125) AGENCOURT_8909909 NIH_MGC_141 Homo sapiens cDNA c...    52   0.063  1
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875...    34   0.065  11
(AY242996) Antheraea pernyi mitochondrion, complete genome.        40   0.090  3
(AC116919) Dictyostelium discoideum chromosome 2 map complem...    38   0.14   7
(U41995) Caenorhabditis elegans cosmid E02C12, complete sequ...    36   0.23   6
(AC186676) Medicago truncatula chromosome 7 BAC clone mte1-3...    50   0.25   1
(EK382873) 1095469468926 Global-Ocean-Sampling_GS-31-01-01-1...    50   0.25   1
(DH436192) Macropus eugenii DNA with T7 primer, fosmid clone...    50   0.25   1
(T25477) PTHI265 HTCDL1 Homo sapiens cDNA 5'/3' similar to E...    50   0.25   1
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome.         40   0.25   19
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720...    32   0.26   13
(EJ266225) 1095351013299 Global-Ocean-Sampling_GS-27-01-01-1...    42   0.34   2
(CT961053) Zebrafish DNA sequence from clone CH73-88E19 in l...    44   0.36   4
(EK097926) 1092962050848 Global-Ocean-Sampling_GS-31-01-01-1...    40   0.38   2
(BX664745) Zebrafish DNA sequence from clone DKEY-242A8 in l...    36   0.42   10
(BX571978) Zebrafish DNA sequence from clone CH211-156B2 in ...    40   0.43   7
(AX344560) Sequence 11 from Patent WO0200932.                      42   0.47   14
(AX344551) Sequence 2 from Patent WO0200932.                       32   0.47   14
(AC115606) Dictyostelium discoideum chromosome 2 map 159760-...    36   0.48   6
(AE015927) Clostridium tetani E88, complete genome.                40   0.56   17
(DD010735) Diagnosis of known genetic Parameters within the ...    42   0.60   17
(AM456404) Vitis vinifera contig VV78X031831.8, whole genome...    40   0.62   3
(ED414042) AUAC-aan16c04.b1 Ascaris suum whole genome shotgu...    36   0.70   2
(ED056201) AUAC-aaz62a04.g1 Ascaris suum whole genome shotgu...    36   0.70   2
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g...    32   0.76   11
(AC129715) Medicago truncatula clone mth2-36p23, complete se...    34   0.80   8
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl...    36   0.83   14
(AC115581) Dictyostelium discoideum chromosome 2 map complem...    34   0.87   7
(AL844509) Plasmodium falciparum chromosome 13.                    38   0.87   11
(AE014834) Plasmodium falciparum 3D7 chromosome 10 section 6...    36   0.94   10
(BX537310) Zebrafish DNA sequence from clone CH211-138N17 in...    48   0.98   1
(AM451669) Vitis vinifera contig VV78X093984.17, whole genom...    48   0.98   1
(AL929351) Plasmodium falciparum strain 3D7, chromosome 5, s...    48   0.98   1
(AC177498) Strongylocentrotus purpuratus clone R3-1027M18, W...    48   0.98   1
(EK381939) 1095469465086 Global-Ocean-Sampling_GS-31-01-01-1...    48   0.98   1
(AM864500) Crassostrea gigas EST, 5' end sequence, clone cdn...    48   0.98   1
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8...    34   1.1    11
(AL928740) Zebrafish DNA sequence from clone CH211-129O13.         46   1.2    8
(AP003637) Mus musculus genomic DNA, chromosome 16q clone:RP...    32   1.2    13
(EJ129792) 1092343424441 Global-Ocean-Sampling_GS-27-01-01-1...    44   1.4    2
(AC027576) Homo sapiens chromosome 4 clone RP11-162M10 map 4...    38   1.7    3
(AC013837) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    34   1.7    5
(AC006746) Caenorhabditis elegans clone Y39A3, *** SEQUENCIN...    36   1.8    9
(DN495171) N023E01.5pR Populus bark cDNA library Populus tre...    38   1.9    3
(AW151602) xf66e03.x1 NCI_CGAP_Gas4 Homo sapiens cDNA clone ...    32   2.2    3
(AL357932) Human DNA sequence from clone RP11-435N12 on chro...    36   2.3    11
(ET109883) QM0AAC18AC02FM1 CCH3 Citrus clementina genomic cl...    34   2.4    3
(AC021286) Homo sapiens clone RP11-21H22, WORKING DRAFT SEQU...    38   2.4    6
(EU004203) Saccharomyces cerevisiae YJM789 mitochondrion, co...    38   2.6    4
(EK510238) 1095515473957 Global-Ocean-Sampling_GS-32-01-01-1...    34   2.6    2
(ET718987) CHO_OF118xc12f1.ab1 CHO_OF Nicotiana tabacum geno...    36   2.6    2
(DH226816) Oryzias latipes Fosmid clone:GOLWFno558_a23, forw...    36   2.6    2
(FH405227) CHO_OF4840xe13f1.ab1 CHO_OF4 Nicotiana tabacum ge...    36   2.6    2
(AM459270) Vitis vinifera contig VV78X221776.6, whole genome...    42   2.9    3
(EB446034) KR2B.110D02F.051229T7 KR2B Nicotiana tabacum cDNA...    38   3.0    2
(CP001056) Clostridium botulinum B str. Eklund 17B, complete...    36   3.1    18
(ER364999) 1093018978124 Global-Ocean-Sampling_GS-34-01-01-1...    44   3.4    2
(AC102569) Mus musculus chromosome 12, clone RP23-226F7, com...    36   3.5    9
(CC740454) ZMMBBb0107E01.f ZMMBBb Zea mays subsp. mays genom...    44   3.6    2
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ...    34   3.7    12
(CP000678) Methanobrevibacter smithii ATCC 35061, complete g...    34   3.8    24
(AM180355) Clostridium difficile 630 complete genome.              36   3.8    20
(BV323847) S236P68RH2.T0 AlaskanMalamute Canis familiaris ST...    46   3.9    1
(AL671896) Mouse DNA sequence from clone RP23-354F16 on chro...    46   3.9    1
(AC153375) Mus musculus 6 BAC RP23-353E9 (Roswell Park Cance...    46   3.9    1
(AC144509) Mus musculus BAC clone RP23-394G5 from chromosome...    46   3.9    1
(AC125046) Mus musculus BAC clone RP23-349O22 from 6, comple...    46   3.9    1
(AC108949) Mus musculus BAC clone RP23-451K2 from 6, complet...    46   3.9    1
(AM481248) Vitis vinifera contig VV78X061216.6, whole genome...    46   3.9    1
(AM440961) Vitis vinifera contig VV78X037392.6, whole genome...    46   3.9    1
(AC209531) Medicago truncatula chromosome 2 BAC clone mth2-1...    46   3.9    1
(AC150204) Medicago truncatula chromosome 8 clone mth2-69i3,...    46   3.9    1
(AC144592) Medicago truncatula chromosome 8 clone mth2-23m13...    46   3.9    1
(CQ707874) Sequence 52800 from Patent WO02070737.                  46   3.9    1

>(U82515) Dictyostelium discoideum random slug cDNA5 protein (rsc5)
            mRNA, complete cds.
          Length = 1281

 Score = 1796 bits (906), Expect = 0.0
 Identities = 906/906 (100%)
 Strand = Plus / Plus


Query: 381  ggaatcaacagcatcaacaagcgatagtgcatccgccataaccactggtttaagtgaagt 440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111  ggaatcaacagcatcaacaagcgatagtgcatccgccataaccactggtttaagtgaagt 170


Query: 441  agacattaatcaacaatctccaccaattatacttaaagagggtgagatttttgacccatt 500
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171  agacattaatcaacaatctccaccaattatacttaaagagggtgagatttttgacccatt 230


Query: 501  aaaaaatttaaatgaaaaacaattagaagcattcaaagagattaaatcaaatttctcaga 560
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231  aaaaaatttaaatgaaaaacaattagaagcattcaaagagattaaatcaaatttctcaga 290


Query: 561  tttaactgatccaactgatattgcattttgtacagatatgtgttttttaagatatttaag 620
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291  tttaactgatccaactgatattgcattttgtacagatatgtgttttttaagatatttaag 350


Query: 621  agctagaaattatattgtttcaaaatctgaaaaaatgttaagagacacattagaatggag 680
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351  agctagaaattatattgtttcaaaatctgaaaaaatgttaagagacacattagaatggag 410


Query: 681  aaagaaatttagaccacaagatatccaattaggtggtgatattagagaaattggttcagc 740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411  aaagaaatttagaccacaagatatccaattaggtggtgatattagagaaattggttcagc 470


Query: 741  tggttgtgtttatgtaaataaaagagacaaaaaaggaagaccaatcatttttgcagttcc 800
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471  tggttgtgtttatgtaaataaaagagacaaaaaaggaagaccaatcatttttgcagttcc 530


Query: 801  aagaaatgatacactcaaaaatgtaccaagtgaactcaaatttaaaaatttagtttattg 860
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531  aagaaatgatacactcaaaaatgtaccaagtgaactcaaatttaaaaatttagtttattg 590


Query: 861  gttagaacaaggtttcagtcgtatggatgaaccaaaaggtattgaacaattttgtttcat 920
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591  gttagaacaaggtttcagtcgtatggatgaaccaaaaggtattgaacaattttgtttcat 650


Query: 921  tgtcgattataaagatttcggtagtggtaatatggatatgaaaacaaatttagaagctat 980
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651  tgtcgattataaagatttcggtagtggtaatatggatatgaaaacaaatttagaagctat 710


Query: 981  gcactttttattagatcattgtccagaaagaatgggtcaatctttattccttgatccacc 1040
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711  gcactttttattagatcattgtccagaaagaatgggtcaatctttattccttgatccacc 770


Query: 1041 agcactcttttggtttgcatggaaaattatttcaccatttttaaatgaagttacactttc 1100
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771  agcactcttttggtttgcatggaaaattatttcaccatttttaaatgaagttacactttc 830


Query: 1101 aaaagttagatttataaatagtaaaaaagttgatggaaaaagaacttttgcagaattatt 1160
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831  aaaagttagatttataaatagtaaaaaagttgatggaaaaagaacttttgcagaattatt 890


Query: 1161 agaatatgttgatattgaaaatttggaacaaaatttaggtggtaatttagattataatta 1220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891  agaatatgttgatattgaaaatttggaacaaaatttaggtggtaatttagattataatta 950


Query: 1221 caatatcgatgaatacttgaaagaaaatccagatccaatcgtagatactccaccaatcac 1280
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951  caatatcgatgaatacttgaaagaaaatccagatccaatcgtagatactccaccaatcac 1010


Query: 1281 tttttc 1286
            ||||||
Sbjct: 1011 tttttc 1016

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,583,089,148
Number of extensions: 101188678
Number of successful extensions: 10115428
Number of sequences better than 10.0: 386
Length of query: 1515
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1491
Effective length of database: 97,308,875,965
Effective search space: 145087534063815
Effective search space used: 145087534063815
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7. 1
Homology vs Protein 
Query= Contig-U12006-1 (Contig-U12006-1Q) /CSM_Contig/Contig-U12006-1Q.Seq.d
         (1515 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q55CU8) RecName: Full=Random slug protein 5; AltName: Full=CRAL...   613   e-174
U82515_1(U82515|pid:none) Dictyostelium discoideum random slug c...   593   e-168
AC002983_1(AC002983|pid:none) Arabidopsis thaliana BAC T3F12 fro...   139   3e-31
DQ294263_1(DQ294263|pid:none) Solanum tuberosum clone 130H05 tra...   137   8e-31
AC073942_9(AC073942|pid:none) Sequence of BAC F16L1 from Arabido...   130   1e-28
AK317186_1(AK317186|pid:none) Arabidopsis thaliana AT1G22180 mRN...   129   4e-28
CS560332_1(CS560332|pid:none) Sequence 919 from Patent WO2006032...   127   8e-28
BT052212_1(BT052212|pid:none) Medicago truncatula clone MTYF9_FA...   127   1e-27
EU961303_1(EU961303|pid:none) Zea mays clone 234429 hypothetical...   124   9e-27
AP001080_6(AP001080|pid:none) Oryza sativa Japonica Group genomi...   119   2e-25
AC147964_22(AC147964|pid:none) Medicago truncatula clone mth2-5i...   119   2e-25
BT066776_1(BT066776|pid:none) Zea mays full-length cDNA clone ZM...   119   3e-25
AK117699_1(AK117699|pid:none) Arabidopsis thaliana At4g36640 mRN...   118   5e-25
AL161589_41(AL161589|pid:none) Arabidopsis thaliana DNA chromoso...   118   5e-25
EF086712_1(EF086712|pid:none) Picea sitchensis clone WS02744_N15...   118   7e-25
EF082181_1(EF082181|pid:none) Picea sitchensis clone WS0296_G07 ...   117   1e-24
AC137997_10(AC137997|pid:none) Oryza sativa chromosome 3 BAC OJ1...   115   4e-24
BT069222_1(BT069222|pid:none) Zea mays full-length cDNA clone ZM...   114   7e-24
AC145330_12(AC145330|pid:none) Medicago truncatula clone mth2-17...   114   7e-24
BT042771_1(BT042771|pid:none) Zea mays full-length cDNA clone ZM...   114   9e-24
BT052780_1(BT052780|pid:none) Medicago truncatula clone MTYFH_FI...   114   9e-24
CP000584_242(CP000584|pid:none) Ostreococcus lucimarinus CCE9901...   113   2e-23
(Q9UU99) RecName: Full=CRAL-TRIO domain-containing protein C23B6...   110   2e-22
CP001330_285(CP001330|pid:none) Micromonas sp. RCC299 chromosome...   105   3e-21
AP003262_19(AP003262|pid:none) Oryza sativa Japonica Group genom...   102   5e-20
AC009273_1(AC009273|pid:none) Sequence of BAC T1N6 from Arabidop...   101   8e-20
U88068_1(U88068|pid:none) Oryza sativa sec14 like protein mRNA, ...   100   1e-19
AE016819_894(AE016819|pid:none) Ashbya gossypii (= Eremothecium ...    99   3e-19
AF024652_1(AF024652|pid:none) Glycine max polyphosphoinositide b...    96   3e-18
FN357508_6(FN357508|pid:none) Schistosoma mansoni genome sequenc...    95   8e-18
AM456511_6(AM456511|pid:none) Vitis vinifera contig VV78X130314....    94   1e-17
AY814656_1(AY814656|pid:none) Schistosoma japonicum SJCHGC05717 ...    94   1e-17
BX538350_41(BX538350|pid:none) Cryptosporidium parvum chromosome...    94   1e-17
AM270326_14(AM270326|pid:none) Aspergillus niger contig An14c019...    94   2e-17
BT063722_1(BT063722|pid:none) Zea mays full-length cDNA clone ZM...    94   2e-17
EU966267_1(EU966267|pid:none) Zea mays clone 292994 phosphatidyl...    94   2e-17
AC096688_9(AC096688|pid:none) Oryza sativa chromosome 3 BAC OSJN...    92   4e-17
CR382127_265(CR382127|pid:none) Yarrowia lipolytica strain CLIB1...    92   4e-17
(P53860) RecName: Full=Phosphatidylinositol transfer protein PDR...    92   5e-17
EU970270_1(EU970270|pid:none) Zea mays clone 342912 transporter-...    92   5e-17
AM473362_1(AM473362|pid:none) Vitis vinifera contig VV78X199843....    92   7e-17
AK317365_1(AK317365|pid:none) Arabidopsis thaliana AT4G36640 mRN...    91   1e-16
AY080700_1(AY080700|pid:none) Arabidopsis thaliana putative poly...    91   1e-16
EU966771_1(EU966771|pid:none) Zea mays clone 297267 polyphosphoi...    90   2e-16
AP007166_361(AP007166|pid:none) Aspergillus oryzae RIB40 genomic...    90   2e-16
AC137613_5(AC137613|pid:none) Oryza sativa (japonica cultivar-gr...    89   4e-16
CR382139_166(CR382139|pid:none) Debaryomyces hansenii strain CBS...    89   6e-16
AE016815_13(AE016815|pid:none) Ashbya gossypii (= Eremothecium g...    88   7e-16
EU963581_1(EU963581|pid:none) Zea mays clone 264277 transporter-...    86   3e-15
AB102904_1(AB102904|pid:none) Solanum melongena 5E08 mRNA for hy...    84   1e-14
CP000501_287(CP000501|pid:none) Pichia stipitis CBS 6054 chromos...    84   2e-14
CU928178_662(CU928178|pid:none) Zygosaccharomyces rouxii strain ...    83   2e-14
AY589690_1(AY589690|pid:none) Hevea brasiliensis putative phosph...    83   2e-14
FN392321_861(FN392321|pid:none) Pichia pastoris GS115 chromosome...    82   7e-14
FM992688_352(FM992688|pid:none) Candida dubliniensis CD36 chromo...    82   7e-14
AY035162_1(AY035162|pid:none) Arabidopsis thaliana unknown prote...    82   7e-14
AL161514_13(AL161514|pid:none) Arabidopsis thaliana DNA chromoso...    81   9e-14
(Q9M0R2) RecName: Full=Patellin-5;  &AK229180_1(AK229180|pid:none)     81   9e-14
CR382137_523(CR382137|pid:none) Debaryomyces hansenii strain CBS...    80   2e-13
AY510102_3(AY510102|pid:none) Melampsora lini AvrL567 avirulence...    80   2e-13
AK317770_1(AK317770|pid:none) Arabidopsis thaliana AT1G75170 mRN...    80   3e-13
CR382125_231(CR382125|pid:none) Kluyveromyces lactis strain NRRL...    79   3e-13
CR380956_344(CR380956|pid:none) Candida glabrata strain CBS138 c...    79   4e-13
FN392321_668(FN392321|pid:none) Pichia pastoris GS115 chromosome...    79   4e-13
CR380956_448(CR380956|pid:none) Candida glabrata strain CBS138 c...    78   7e-13
BT066580_1(BT066580|pid:none) Zea mays full-length cDNA clone ZM...    77   1e-12
CU640366_673(CU640366|pid:none) Podospora anserina genomic DNA c...    77   2e-12
AP008209_756(AP008209|pid:none) Oryza sativa (japonica cultivar-...    77   2e-12
CR940348_180(CR940348|pid:none) Theileria annulata strain Ankara...    76   4e-12
AL670005_1(AL670005|pid:none) Neurospora crassa DNA linkage grou...    76   4e-12
AM494971_349(AM494971|pid:none) Leishmania braziliensis chromoso...    76   4e-12
(Q10138) RecName: Full=CRAL-TRIO domain-containing protein C3H8....    75   5e-12
CR380956_314(CR380956|pid:none) Candida glabrata strain CBS138 c...    75   5e-12
A37766(A37766)SEC14 protein - yeast (Kluyveromyces marxianus var...    75   6e-12
CU928168_586(CU928168|pid:none) Kluyveromyces thermotolerans str...    75   6e-12
CR940353_498(CR940353|pid:none) Theileria annulata strain Ankara...    75   6e-12
CU928179_148(CU928179|pid:none) Zygosaccharomyces rouxii strain ...    74   1e-11
BT052862_1(BT052862|pid:none) Medicago truncatula clone MTYFL_FM...    74   2e-11
AM478536_1(AM478536|pid:none) Vitis vinifera contig VV78X135118....    74   2e-11
BT045370_1(BT045370|pid:none) Salmo salar clone ssal-rgf-519-226...    73   2e-11
(Q10137) RecName: Full=Sec14 cytosolic factor; AltName: Full=Pho...    72   4e-11
AE014296_1096(AE014296|pid:none) Drosophila melanogaster chromos...    72   4e-11
AM910991_253(AM910991|pid:none) Plasmodium knowlesi strain H chr...    72   4e-11
AM434142_1(AM434142|pid:none) Vitis vinifera contig VV78X177908....    72   7e-11
AB022215_14(AB022215|pid:none) Arabidopsis thaliana genomic DNA,...    71   1e-10
AK010480_1(AK010480|pid:none) Mus musculus ES cells cDNA, RIKEN ...    71   1e-10
BC085670_1(BC085670|pid:none) Danio rerio motile sperm domain co...    70   2e-10
(Q9CWP6) RecName: Full=Motile sperm domain-containing protein 2;       70   2e-10
AK031405_1(AK031405|pid:none) Mus musculus 13 days embryo male t...    70   2e-10
BT034417_1(BT034417|pid:none) Zea mays full-length cDNA clone ZM...    70   3e-10
BC081354_1(BC081354|pid:none) Xenopus tropicalis mospd2 protein,...    70   3e-10
CP000081_352(CP000081|pid:none) Leishmania major chromosome 35, ...    70   3e-10
(O43304) RecName: Full=SEC14-like protein 5;  &AB383878_1(AB3838...    69   5e-10
AM468012_5(AM468012|pid:none) Vitis vinifera contig VV78X019711....    69   5e-10
CR382129_654(CR382129|pid:none) Yarrowia lipolytica strain CLIB1...    69   5e-10
AB007880_1(AB007880|pid:none) Homo sapiens KIAA0420 mRNA, comple...    69   5e-10
FN392322_593(FN392322|pid:none) Pichia pastoris GS115 chromosome...    69   6e-10
L20972_1(L20972|pid:none) Yarrowia lipolytica phosphatidylinosit...    68   8e-10
CR382129_199(CR382129|pid:none) Yarrowia lipolytica strain CLIB1...    68   1e-09
BT036725_1(BT036725|pid:none) Zea mays full-length cDNA clone ZM...    67   1e-09
AC130600_5(AC130600|pid:none) Oryza sativa (japonica cultivar-gr...    67   2e-09
FM992692_49(FM992692|pid:none) Candida dubliniensis CD36 chromos...    67   2e-09
AE014296_572(AE014296|pid:none) Drosophila melanogaster chromoso...    67   2e-09
AM920427_1560(AM920427|pid:none) Penicillium chrysogenum Wiscons...    67   2e-09
(Q29JQ0) RecName: Full=Protein real-time;                              67   2e-09
S57923(S57923;S72193)SEC14 protein - yeast (Candida albicans)          67   2e-09
EU975210_1(EU975210|pid:none) Zea mays clone 484466 CRAL/TRIO do...    67   2e-09
AY048199_1(AY048199|pid:none) Arabidopsis thaliana At1g72160/T9N...    66   3e-09
AM463399_5(AM463399|pid:none) Vitis vinifera contig VV78X025471....    66   3e-09
AC140722_2(AC140722|pid:none) Medicago truncatula clone mth2-14e...    66   3e-09
AE014186_268(AE014186|pid:none) Plasmodium falciparum 3D7 chromo...    66   3e-09
CR382133_199(CR382133|pid:none) Debaryomyces hansenii strain CBS...    66   4e-09
AF366901_1(AF366901|pid:none) Lotus japonicus phosphatidylinosit...    65   5e-09
(Q9UUC2) RecName: Full=CRAL-TRIO domain-containing protein C365....    65   5e-09
CR548612_329(CR548612|pid:none) Paramecium tetraurelia macronucl...    65   5e-09
AM502253_363(AM502253|pid:none) Leishmania infantum chromosome 35.     65   5e-09
AK073077_1(AK073077|pid:none) Oryza sativa Japonica Group cDNA c...    65   9e-09
CR954204_259(CR954204|pid:none) Ostreococcus tauri strain OTTH05...    65   9e-09
(Q0V9N0) RecName: Full=SEC14-like protein 5;  &BC121463_1(BC1214...    65   9e-09
AM920431_638(AM920431|pid:none) Penicillium chrysogenum Wisconsi...    64   1e-08
AM269993_6(AM269993|pid:none) Aspergillus niger contig An01c0470...    64   1e-08
AB236749_1(AB236749|pid:none) Trifolium pratense RNA for putativ...    64   1e-08
AC125480_15(AC125480|pid:none) Medicago truncatula clone mth2-8c...    64   2e-08
BT063301_1(BT063301|pid:none) Zea mays full-length cDNA clone ZM...    64   2e-08
(P33324) RecName: Full=CRAL-TRIO domain-containing protein YKL09...    64   2e-08
(P53844) RecName: Full=Phosphatidylinositol transfer protein PDR...    64   2e-08
BC129611_1(BC129611|pid:none) Xenopus laevis hypothetical protei...    64   2e-08
AC007212_4(AC007212|pid:none) Arabidopsis thaliana chromosome 2 ...    63   2e-08
CR382124_862(CR382124|pid:none) Kluyveromyces lactis strain NRRL...    63   2e-08
FJ502061_1(FJ502061|pid:none) Aristichthys nobilis clone A166 mo...    63   2e-08
AP009565_7(AP009565|pid:none) Lotus japonicus genomic DNA, chrom...    63   2e-08
AM270115_50(AM270115|pid:none) Aspergillus niger contig An06c009...    63   2e-08
DQ251455_1(DQ251455|pid:none) Cucurbita pepo patellin 1 (PATL1) ...    63   2e-08
AM270365_19(AM270365|pid:none) Aspergillus niger contig An16c013...    63   3e-08
AM989981_9(AM989981|pid:none) Zygosaccharomyces rouxii strain CB...    63   3e-08
AB267828_1(AB267828|pid:none) Ipomoea nil In32 mRNA for SEC14 cy...    63   3e-08
AK093075_1(AK093075|pid:none) Homo sapiens cDNA FLJ35756 fis, cl...    62   4e-08
BC082398_1(BC082398|pid:none) Xenopus laevis MGC81931 protein, m...    62   4e-08
AL050351_8(AL050351|pid:none) Arabidopsis thaliana DNA chromosom...    62   7e-08
AP005192_15(AP005192|pid:none) Oryza sativa Japonica Group genom...    62   7e-08
FB900304_1(FB900304|pid:none) Sequence 119577 from Patent WO2008...    61   9e-08
AC140722_3(AC140722|pid:none) Medicago truncatula clone mth2-14e...    60   2e-07
FB900256_1(FB900256|pid:none) Sequence 119529 from Patent WO2008...    60   2e-07
EF678229_1(EF678229|pid:none) Picea sitchensis clone WS0285_N16 ...    60   2e-07
AL023094_16(AL023094|pid:none) Arabidopsis thaliana DNA chromoso...    60   2e-07
(Q9VMD6) RecName: Full=Protein real-time;  &AE014134_1141(AE0141...    60   2e-07
CU928170_107(CU928170|pid:none) Kluyveromyces thermotolerans str...    60   2e-07
EU962184_1(EU962184|pid:none) Zea mays clone 240809 patellin-5 m...    60   3e-07
AC121244_13(AC121244|pid:none) Medicago truncatula clone mth2-31...    60   3e-07
CU928168_244(CU928168|pid:none) Kluyveromyces thermotolerans str...    59   4e-07
CU633865_82(CU633865|pid:none) Podospora anserina genomic DNA ch...    59   4e-07
AF487977_1(AF487977|pid:none) Bos taurus tocopherol-associated p...    59   5e-07
(P58875) RecName: Full=SEC14-like protein 2; AltName: Full=Alpha...    59   5e-07
FB910613_1(FB910613|pid:none) Sequence 129886 from Patent WO2008...    59   5e-07
(Q99J08) RecName: Full=SEC14-like protein 2; AltName: Full=Alpha...    59   6e-07
AP007167_442(AP007167|pid:none) Aspergillus oryzae RIB40 genomic...    59   6e-07
BC143077_1(BC143077|pid:none) Synthetic construct Homo sapiens c...    59   6e-07
CU633872_232(CU633872|pid:none) Podospora anserina genomic DNA c...    58   8e-07
BX908789_19(BX908789|pid:none) Neurospora crassa DNA linkage gro...    58   8e-07
AB173616_1(AB173616|pid:none) Macaca fascicularis brain cDNA clo...    58   1e-06
AK118252_1(AK118252|pid:none) Arabidopsis thaliana At1g14820 mRN...    58   1e-06
AP008208_1167(AP008208|pid:none) Oryza sativa (japonica cultivar...    57   1e-06
AC118285_12(AC118285|pid:none) Oryza sativa (japonica cultivar-g...    57   1e-06
FB910591_1(FB910591|pid:none) Sequence 129864 from Patent WO2008...    57   1e-06
CR857519_1(CR857519|pid:none) Pongo abelii mRNA; cDNA DKFZp459B2...    57   1e-06
BC162038_1(BC162038|pid:none) Rattus norvegicus SEC14-like 3 (S....    57   1e-06
AP004151_12(AP004151|pid:none) Oryza sativa Japonica Group genom...    57   1e-06
(Q9Z1J8) RecName: Full=SEC14-like protein 3; AltName: Full=45 kD...    57   1e-06
AK100898_1(AK100898|pid:none) Oryza sativa Japonica Group cDNA c...    57   1e-06
AM270128_11(AM270128|pid:none) Aspergillus niger contig An07c010...    57   2e-06
AB168180_1(AB168180|pid:none) Macaca fascicularis testis cDNA cl...    57   2e-06
AB208811_1(AB208811|pid:none) Homo sapiens mRNA for Hypothetical...    57   2e-06
BT054791_1(BT054791|pid:none) Zea mays full-length cDNA clone ZM...    57   2e-06
BC101004_1(BC101004|pid:none) Homo sapiens SEC14-like 3 (S. cere...    57   2e-06
AK293206_1(AK293206|pid:none) Homo sapiens cDNA FLJ59456 complet...    57   2e-06
BX537448_1(BX537448|pid:none) Homo sapiens mRNA; cDNA DKFZp686C0...    57   2e-06
(Q9UDX4) RecName: Full=SEC14-like protein 3; AltName: Full=Tocop...    57   2e-06
AC134927_4(AC134927|pid:none) Oryza sativa (japonica cultivar-gr...    57   2e-06
AK172947_1(AK172947|pid:none) Mus musculus mRNA for mKIAA4251 pr...    56   3e-06
BT086595_1(BT086595|pid:none) Zea mays full-length cDNA clone ZM...    56   3e-06
AL627205_5(AL627205|pid:none) Mouse DNA sequence from clone RP23...    56   3e-06
BC151509_1(BC151509|pid:none) Bos taurus SEC14-like 1 (S. cerevi...    56   3e-06
FB900264_1(FB900264|pid:none) Sequence 119537 from Patent WO2008...    56   4e-06
AM393464_1(AM393464|pid:none) Synthetic construct Homo sapiens c...    56   4e-06
BC069641_1(BC069641|pid:none) Homo sapiens SEC14-like 3 (S. cere...    56   4e-06
AK314390_1(AK314390|pid:none) Homo sapiens cDNA, FLJ95164, highl...    56   4e-06
BT042333_1(BT042333|pid:none) Zea mays full-length cDNA clone ZM...    56   4e-06
AY037182_1(AY037182|pid:none) Arabidopsis thaliana AT4g39170/T22...    56   4e-06
S28303(S28303)hypothetical protein T23G5.2 - Caenorhabditis eleg...    55   5e-06
BT054564_1(BT054564|pid:none) Zea mays full-length cDNA clone ZM...    55   7e-06
CU928174_505(CU928174|pid:none) Zygosaccharomyces rouxii strain ...    55   9e-06
AK070235_1(AK070235|pid:none) Oryza sativa Japonica Group cDNA c...    55   9e-06
FB900312_1(FB900312|pid:none) Sequence 119585 from Patent WO2008...    55   9e-06
AB033012_1(AB033012|pid:none) Homo sapiens mRNA for KIAA1186 pro...    55   9e-06
(O76054) RecName: Full=SEC14-like protein 2; AltName: Full=Alpha...    55   9e-06
BC058915_1(BC058915|pid:none) Homo sapiens SEC14-like 2 (S. cere...    55   9e-06
JC7708(JC7708)tocopherol associated protein - human                    54   1e-05
(Q92503) RecName: Full=SEC14-like protein 1;  &D67029_1(D67029|p...    54   2e-05
AB008265_2(AB008265|pid:none) Arabidopsis thaliana genomic DNA, ...    54   2e-05
BC163195_1(BC163195|pid:none) Danio rerio hypothetical LOC566865...    53   3e-05
CP001325_516(CP001325|pid:none) Micromonas sp. RCC299 chromosome...    53   3e-05
AC007047_11(AC007047|pid:none) Arabidopsis thaliana chromosome 2...    53   3e-05
U32305_16(U32305|pid:none) Caenorhabditis elegans cosmid B0336, ...    52   4e-05
AP004553_10(AP004553|pid:none) Oryza sativa Japonica Group genom...    52   4e-05
FB910581_1(FB910581|pid:none) Sequence 129854 from Patent WO2008...    52   6e-05
BC134901_1(BC134901|pid:none) Danio rerio hypothetical LOC566865...    52   6e-05
AC183494_14(AC183494|pid:none) Brassica oleracea Contig C, compl...    52   8e-05
AC137003_6(AC137003|pid:none) Oryza sativa (japonica cultivar-gr...    51   1e-04
AB025628_10(AB025628|pid:none) Arabidopsis thaliana genomic DNA,...    51   1e-04
FB910585_1(FB910585|pid:none) Sequence 129858 from Patent WO2008...    51   1e-04
AC121244_18(AC121244|pid:none) Medicago truncatula clone mth2-31...    51   1e-04
BC139912_1(BC139912|pid:none) Homo sapiens SEC14-like 4 (S. cere...    50   2e-04
AK319076_1(AK319076|pid:none) Arabidopsis thaliana AT1G22530 mRN...    50   2e-04
FN357313_7(FN357313|pid:none) Schistosoma mansoni genome sequenc...    50   2e-04
(Q9Z275) RecName: Full=Retinaldehyde-binding protein 1; AltName:...    49   4e-04
AM440904_2(AM440904|pid:none) Vitis vinifera contig VV78X119347....    49   4e-04
FB910575_1(FB910575|pid:none) Sequence 129848 from Patent WO2008...    49   5e-04
AP003245_2(AP003245|pid:none) Oryza sativa Japonica Group genomi...    49   5e-04
FB910589_1(FB910589|pid:none) Sequence 129862 from Patent WO2008...    48   8e-04
AK061499_1(AK061499|pid:none) Oryza sativa Japonica Group cDNA c...    48   8e-04
EU964706_1(EU964706|pid:none) Zea mays clone 280990 hypothetical...    48   8e-04
AM920436_1692(AM920436|pid:none) Penicillium chrysogenum Wiscons...    48   0.001
AK068100_1(AK068100|pid:none) Oryza sativa Japonica Group cDNA c...    48   0.001
(Q8R0F9) RecName: Full=SEC14-like protein 4;  &AL807395_7(AL8073...    48   0.001
(P12271) RecName: Full=Retinaldehyde-binding protein 1; AltName:...    48   0.001
CP001331_271(CP001331|pid:none) Micromonas sp. RCC299 chromosome...    47   0.001
A31955(A31955;A30052) cellular retinaldehyde-binding protein - b...    47   0.002
CR954220_89(CR954220|pid:none) Ostreococcus tauri strain OTTH059...    46   0.003
AP005641_13(AP005641|pid:none) Oryza sativa Japonica Group genom...    45   0.005
U32305_17(U32305|pid:none) Caenorhabditis elegans cosmid B0336, ...    45   0.007
(Q56WK6) RecName: Full=Patellin-1;  &AC067754_3(AC067754|pid:non...    45   0.009
BC120194_1(BC120194|pid:none) Bos taurus SEC14-like 4 (S. cerevi...    45   0.009
(Q9HDZ5) RecName: Full=CRAL-TRIO domain-containing protein C589....    44   0.012
EU344788_1(EU344788|pid:none) Euprymna scolopes light organ reti...    44   0.020
AK156572_1(AK156572|pid:none) Mus musculus activated spleen cDNA...    44   0.020
AM435647_1(AM435647|pid:none) Vitis vinifera contig VV78X002580....    44   0.020
EU344787_1(EU344787|pid:none) Euprymna scolopes eye retinal-bind...    43   0.035
CP000585_72(CP000585|pid:none) Ostreococcus lucimarinus CCE9901 ...    43   0.035
AC074282_23(AC074282|pid:none) Oryza sativa (japonica cultivar-g...    42   0.046
AK117291_1(AK117291|pid:none) Arabidopsis thaliana At4g39180 mRN...    42   0.046
AK039893_1(AK039893|pid:none) Mus musculus 0 day neonate thymus ...    41   0.10
AC149032_3(AC149032|pid:none) Medicago truncatula chromosome 2 c...    41   0.13
DQ440170_1(DQ440170|pid:none) Aedes aegypti clone AET-12150 phos...    41   0.13
BT054189_1(BT054189|pid:none) Zea mays full-length cDNA clone ZM...    40   0.17
CU928176_88(CU928176|pid:none) Zygosaccharomyces rouxii strain C...    40   0.17
(Q6CXS7) RecName: Full=Phosphatidylinositol transfer protein SFH...    40   0.23
EU967800_1(EU967800|pid:none) Zea mays clone 306221 unknown mRNA.      40   0.23
AF390101_1(AF390101|pid:none) Aedes aegypti strain MOYO-R CRALBP...    40   0.30
AC005106_2(AC005106|pid:none) Genomic sequence for Arabidopsis t...    40   0.30
AY064089_1(AY064089|pid:none) Aedes aegypti clone rBPcRc6 cellul...    40   0.30
AF329893_1(AF329893|pid:none) Aedes aegypti CRALBP (CRALBP) mRNA...    40   0.30
EU960734_1(EU960734|pid:none) Zea mays clone 228070 unknown mRNA.      40   0.30
AC000098_1(AC000098|pid:none) Arabidopsis thaliana chromosome 1 ...    40   0.30
AM435647_2(AM435647|pid:none) Vitis vinifera contig VV78X002580....    39   0.39
AM910993_229(AM910993|pid:none) Plasmodium knowlesi strain H chr...    39   0.39
CS300706_1(CS300706|pid:none) Sequence 214 from Patent EP1661986.      39   0.50
(A7EXH9) RecName: Full=Phosphatidylinositol transfer protein sfh...    39   0.50
(Q8IUQ0) RecName: Full=Retinaldehyde-binding protein 1-like prot...    39   0.50
(Q5RCA6) RecName: Full=Retinaldehyde-binding protein 1-like prot...    39   0.66
(Q9D4C9) RecName: Full=Retinaldehyde-binding protein 1-like prot...    39   0.66
AK084350_1(AK084350|pid:none) Mus musculus 12 days embryo eyebal...    39   0.66
CP001574_384(CP001574|pid:none) Micromonas sp. RCC299 chromosome...    38   0.86
EF083657_1(EF083657|pid:none) Picea sitchensis clone WS0286_I09 ...    38   0.86
FB910573_1(FB910573|pid:none) Sequence 129846 from Patent WO2008...    38   1.1
AB060190_1(AB060190|pid:none) Macaca fascicularis brain cDNA clo...    38   1.1
AB170306_1(AB170306|pid:none) Macaca fascicularis brain cDNA clo...    38   1.1
(A6S3N2) RecName: Full=Phosphatidylinositol transfer protein sfh...    37   1.5
U79284_1(U79284|pid:none) Human SEC14L mRNA, partial cds.              37   1.5
(Q5SYC1) RecName: Full=Retinaldehyde-binding protein 1-like prot...    37   1.9
CR940353_820(CR940353|pid:none) Theileria annulata strain Ankara...    37   2.5
AY811478_1(AY811478|pid:none) Schistosoma japonicum SJCHGC07579 ...    37   2.5
AM454774_1(AM454774|pid:none) Vitis vinifera contig VV78X253466....    37   2.5
CP001330_557(CP001330|pid:none) Micromonas sp. RCC299 chromosome...    36   4.3
CU928170_225(CU928170|pid:none) Kluyveromyces thermotolerans str...    35   9.5
(Q1DSY1) RecName: Full=Phosphatidylinositol transfer protein SFH...    35   9.5
AC137669_1(AC137669|pid:none) Medicago truncatula clone mth2-27m...    35   9.5
AC002328_11(AC002328|pid:none) Genomic sequence for Arabidopsis ...    35   9.5
AM910989_179(AM910989|pid:none) Plasmodium knowlesi strain H chr...    35   9.5

>(Q55CU8) RecName: Full=Random slug protein 5; AltName: Full=CRAL-TRIO
            domain-containing protein 5;
          Length = 364

 Score =  613 bits (1580), Expect = e-174
 Identities = 306/348 (87%), Positives = 306/348 (87%)
 Frame = +1

Query: 427  GLSEVDINQQSPPIILKEGEIFDPLKNLNEKQLEAFKEIKSNFSDLTDPTDIAFCTDMCF 606
            GLSEVDINQQSPPIILKEGEIFDPLKNLNEKQLEAFKEIKSNFSDLTDPTDIAFCTDMCF
Sbjct: 17   GLSEVDINQQSPPIILKEGEIFDPLKNLNEKQLEAFKEIKSNFSDLTDPTDIAFCTDMCF 76

Query: 607  LRYLRARNYIVSKSEKMLRDTLEWRKKFRPQDIQLGGDIREIGSAGCVYVNKRDKKGRPI 786
            LRYLRARNYIVSKSEKMLRDTLEWRKKFRPQDIQLGGDIREIGSAGCVYVNKRDKKGRPI
Sbjct: 77   LRYLRARNYIVSKSEKMLRDTLEWRKKFRPQDIQLGGDIREIGSAGCVYVNKRDKKGRPI 136

Query: 787  IFAVPRNDTLKNVPSELKFKNLVYWLEQGFSRMDEPKGIEQFCFIVDYKDFGSGNMDMKT 966
            IFAVPRNDTLKNVPSELKFKNLVYWLEQGFSRMDEPKGIEQFCFIVDYKDFGSGNMDMKT
Sbjct: 137  IFAVPRNDTLKNVPSELKFKNLVYWLEQGFSRMDEPKGIEQFCFIVDYKDFGSGNMDMKT 196

Query: 967  NLEAMHFLLDHCPERMGQSLFLDPPALFWFAWKIISPFLNEVTLSKVRFINSKKVDGKRT 1146
            NLEAMHFLLDHCPERMGQSLFLDPPALFWFAWKIISPFLNEVTLSKVRFINSKKVDGKRT
Sbjct: 197  NLEAMHFLLDHCPERMGQSLFLDPPALFWFAWKIISPFLNEVTLSKVRFINSKKVDGKRT 256

Query: 1147 FAELLEYVDIENLEQNLGGNLDYNYNIDEYLKENPDPIVDTPPITFSTETDSXXXXXXXX 1326
            FAELLEYVDIENLEQNLGGNLDYNYNIDEYLKENPDPIVDTPPITFSTETDS
Sbjct: 257  FAELLEYVDIENLEQNLGGNLDYNYNIDEYLKENPDPIVDTPPITFSTETDSKKQKKEKK 316

Query: 1327 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFTKQQENADEVD 1470
                                              ASFTKQQENADEVD
Sbjct: 317  KEEKEKKKEEKEKKKEEKEEKKKEKEEKKKLKKEASFTKQQENADEVD 364

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,670,986,710
Number of extensions: 29059600
Number of successful extensions: 86480
Number of sequences better than 10.0: 278
Number of HSP's gapped: 86233
Number of HSP's successfully gapped: 282
Length of query: 505
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 372
Effective length of database: 620,718,517
Effective search space: 230907288324
Effective search space used: 230907288324
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.49  gvh: 0.58  alm: 0.15  top: 0.07  tms: 0.07  mit: 0.39  mip: 0.00
 nuc: 0.33  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 24.0 %: mitochondrial
	 20.0 %: nuclear
	 16.0 %: cytoplasmic
	 16.0 %: Golgi
	  8.0 %: vacuolar
	  8.0 %: endoplasmic reticulum
	  4.0 %: extracellular, including cell wall
	  4.0 %: peroxisomal

>> prediction for Contig-U12006-1 is mit
VS (DIR, S) 1
VH (FL, L) 1
VF (FL, S) 4
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 5
CH (FL, L) 0
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0