Contig-U11992-1
Contig ID Contig-U11992-1
Contig update 2002.12.18
Contig sequence
>Contig-U11992-1 (Contig-U11992-1Q) /CSM_Contig/Contig-U11992-1Q.Seq.d
AATATTTTAAATAAATGAAAATATGGGAAGATTTGGAGCAGTGAGTTATA
GACAAGTTAAACAATCTGAAGCAGATACTATTGAGATAGATTCATTAAAA
AATGGAGACATTGAAAAATACAATGAAGAGAATGATAAAATATCAAGGAT
ACCATTAGCACAACTATCGATAAATAAAATCAATGGTATAAAAAGTTCAG
TCATTGAGGAGTTATCTTTGAAAAGGCCATCCTATTTTATGGCAACGAAA
ATGATAAAATCATTACTTCCCTATTACTGGAAAAAGAATCCTTTTAAATT
TCGAATCATTTTATGTGTATCTATTATTTTCTTTTCAAAATTGATAAATT
TAAGTGTACCTTTAATATTTAAAAATATAATTAATACACTACCAGAAAAA
GTAGAATGGCATTTATTGATTTTATATGGTGTCCTTTTTTTAATTCAAAA
AAGTATTTGGGATATTCGTGATCTTTTGTTTCAAGATGTAAATGATAGTG
CAACAAAACAAATAAATTTAGAAACTTTTGATCATTTACATAGATTGTCA
TTATCATACCATTTAAATAAGAGA----------AACGAGTTTAAGATCA
ATAATTGGAGTTGTTCCACAAGAAACAGTTCTCTTTAATGATACTGTGGC
CTATAATATTGGCTTTGGTAACAGAGAGGCAAACGATGATCAATTGATTG
ATGCTTCTCGTCGTGCTCAAATATTGTCCTTTATTGAATCATCTCCTGAT
GGCTTCAGAACTGTGGTAGGCGAAANAGGTTTAAGATTGAGTGGTGGTGA
AAAACAAAGGGTTTCAATTGCTAGAGCTTTATTAAAAGATCCNCCAATTT
TAATTTTAGATGAAGCATCTAGTTCTTTAGACACCTTTACAGAGAGAAAA
ATCCAACAAGCAATCAATGAAGTATCAAAAGGTAGAACAACATTGGTCAT
AGCTCATAGGCTCTCCNCAATAATTCATTGTGATGAAATTTTGGTTTTGA
AGGGTGGTCATATAGTAGAGCGAGGGAGTCACTCTTATCTATTGGATTTT
AATGGTGACTATGCCCATCTGTGGAATCAACAACAGCTATCAGCCAGTGA
TCTCCAATACACACCAAATCAAGATACCTTTGAGTAATAAAAGTGTATTT
TTATTATTATAATAACNCATTGAATCNTTTTCTAAAAAATTTTTAAAAAA
TTTTCATTTCGATGTTTTTTTTTTTAATAAAA

Gap gap included
Contig length 1222
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 11911
End point 10686
Strand (PLUS/MINUS) MINUS
Number of clones 3
Number of EST 4
Link to clone list U11992
List of clone(s)

est1=SFG201F,1,505
est2=AHP185F,4,574
est3=VHH327F,4,483
est4=SFG201Z,575,1223
Translated Amino Acid sequence
if*INENMGRFGAVSYRQVKQSEADTIEIDSLKNGDIEKYNEENDKISRIPLAQLSINKI
NGIKSSVIEELSLKRPSYFMATKMIKSLLPYYWKKNPFKFRIILCVSIIFFSKLINLSVP
LIFKNIINTLPEKVEWHLLILYGVLFLIQKSIWDIRDLLFQDVNDSATKQINLETFDHLH
RLSLSYHLNKR---

---TSLRSIIGVVPQETVLFNDTVAYNIGFGNREANDDQLIDASRRAQILSFIESSPDGF
RTVVGEXGLRLSGGEKQRVSIARALLKDPPILILDEASSSLDTFTERKIQQAINEVSKGR
TTLVIAHRLSXIIHCDEILVLKGGHIVERGSHSYLLDFNGDYAHLWNQQQLSASDLQYTP
NQDTFE**kcifiiiith*ixf*kifkkfsfrcfff**


Translated Amino Acid sequence (All Frames)
Frame A:
nilnk*kygkiwssel*ts*ti*sryy*drfikkwrh*kiq*re**nikdtisttidk*n
qwykkfsh*gvifekailfygnendkiitslllekesf*isnhfmciyyflfkidkfkct
fni*kyn*yttrksrmafidfiwcpffnskkylgys*sfvsrck**cnktnkfrnf*sft
*iviiipfk*e---

---nefkinnwscstrnssl**ycgl*ywlw*qrgkr*sid*cfsscsnivly*iis*wl
qncgrrxrfkieww*ktkgfnc*sfikrsxnfnfr*si*ffrhlyreknptsnq*sikr*
nnighss*alxnnsl**nfgfegwsysraresllsigf*w*lcpsvesttaisq*spiht
ksryl*vikvyfyyynnxlnxflknf*kifismffflik

Frame B:
if*INENMGRFGAVSYRQVKQSEADTIEIDSLKNGDIEKYNEENDKISRIPLAQLSINKI
NGIKSSVIEELSLKRPSYFMATKMIKSLLPYYWKKNPFKFRIILCVSIIFFSKLINLSVP
LIFKNIINTLPEKVEWHLLILYGVLFLIQKSIWDIRDLLFQDVNDSATKQINLETFDHLH
RLSLSYHLNKR---

---TSLRSIIGVVPQETVLFNDTVAYNIGFGNREANDDQLIDASRRAQILSFIESSPDGF
RTVVGEXGLRLSGGEKQRVSIARALLKDPPILILDEASSSLDTFTERKIQQAINEVSKGR
TTLVIAHRLSXIIHCDEILVLKGGHIVERGSHSYLLDFNGDYAHLWNQQQLSASDLQYTP
NQDTFE**kcifiiiith*ixf*kifkkfsfrcfff**

Frame C:
yfk*mkiwedleq*vidklnnlkqillr*ih*kmetlkntmkrmikyqgyh*hnyr*iks
mv*kvqslrsyl*kghpilwqrk**nhyfpitgkrillnfesfyvyllfsfqn**i*vyl
*ylki*lihyqkk*ngiy*fymvsff*fkkvfgifvifcfkm*mivqqnk*i*klliiyi
dchyhti*ir---

---rv*dq*lelfhkkqfslmilwpiilalvterqtmin*lmllvvlkycpllnhllmas
elw*akxv*d*vvvknkgfqllely*kixqf*f*mkhlvl*tplqreksnkqsmkyqkve
qhws*ligspq*fivmkfwf*rvvi**segvtliywilmvtmpicginnsyqpvisnthq
ikiplsnksvflll**xiesfskkflknfhfdvfffnk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11992-1 (Contig-U11992-1Q)
/CSM_Contig/Contig-U11992-1Q.Seq.d
(1232 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11992-1 (Contig-U11992-1Q) /CSM_Contig/Conti... 2214 0.0
Contig-U10981-1 (Contig-U10981-1Q) /CSM_Contig/Conti... 46 9e-05
Contig-U12059-1 (Contig-U12059-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U11054-1 (Contig-U11054-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U08120-1 (Contig-U08120-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U11143-1 (Contig-U11143-1Q) /CSM_Contig/Conti... 38 0.022
Contig-U00939-1 (Contig-U00939-1Q) /CSM_Contig/Conti... 38 0.022
Contig-U14661-1 (Contig-U14661-1Q) /CSM_Contig/Conti... 36 0.087
Contig-U12558-1 (Contig-U12558-1Q) /CSM_Contig/Conti... 36 0.087
Contig-U12074-1 (Contig-U12074-1Q) /CSM_Contig/Conti... 36 0.087

>Contig-U11992-1 (Contig-U11992-1Q) /CSM_Contig/Contig-U11992-1Q.Seq.d
Length = 1232

Score = 2214 bits (1117), Expect = 0.0
Identities = 1176/1183 (99%)
Strand = Plus / Plus


Query: 1 aatattttaaataaatgaaaatatgggaagatttggagcagtgagttatagacaagttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatattttaaataaatgaaaatatgggaagatttggagcagtgagttatagacaagttaa 60


Query: 61 acaatctgaagcagatactattgagatagattcattaaaaaatggagacattgaaaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acaatctgaagcagatactattgagatagattcattaaaaaatggagacattgaaaaata 120


Query: 121 caatgaagagaatgataaaatatcaaggataccattagcacaactatcgataaataaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caatgaagagaatgataaaatatcaaggataccattagcacaactatcgataaataaaat 180


Query: 181 caatggtataaaaagttcagtcattgaggagttatctttgaaaaggccatcctattttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caatggtataaaaagttcagtcattgaggagttatctttgaaaaggccatcctattttat 240


Query: 241 ggcaacgaaaatgataaaatcattacttccctattactggaaaaagaatccttttaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggcaacgaaaatgataaaatcattacttccctattactggaaaaagaatccttttaaatt 300


Query: 301 tcgaatcattttatgtgtatctattattttcttttcaaaattgataaatttaagtgtacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcgaatcattttatgtgtatctattattttcttttcaaaattgataaatttaagtgtacc 360


Query: 361 tttaatatttaaaaatataattaatacactaccagaaaaagtagaatggcatttattgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttaatatttaaaaatataattaatacactaccagaaaaagtagaatggcatttattgat 420


Query: 421 tttatatggtgtccnnnnnnnaattcaaaaaagtatttgggatattcgtgatcttttgtt 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttatatggtgtcctttttttaattcaaaaaagtatttgggatattcgtgatcttttgtt 480


Query: 481 tcaagatgtaaatgatagtgcaacaaaacaaataaatttagaaacttttgatcatttaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcaagatgtaaatgatagtgcaacaaaacaaataaatttagaaacttttgatcatttaca 540


Query: 541 tagattgtcattatcataccatttaaataagagannnnnnnnnnaacgagtttaagatca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tagattgtcattatcataccatttaaataagagannnnnnnnnnaacgagtttaagatca 600


Query: 601 ataattggagttgttccacaagaaacagttctctttaatgatactgtggcctataatatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ataattggagttgttccacaagaaacagttctctttaatgatactgtggcctataatatt 660


Query: 661 ggctttggtaacagagaggcaaacgatgatcaattgattgatgcttctcgtcgtgctcaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggctttggtaacagagaggcaaacgatgatcaattgattgatgcttctcgtcgtgctcaa 720


Query: 721 atattgtcctttattgaatcatctcctgatggcttcagaactgtggtaggcgaaanaggt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atattgtcctttattgaatcatctcctgatggcttcagaactgtggtaggcgaaanaggt 780


Query: 781 ttaagattgagtggtggtgaaaaacaaagggtttcaattgctagagctttattaaaagat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ttaagattgagtggtggtgaaaaacaaagggtttcaattgctagagctttattaaaagat 840


Query: 841 ccnccaattttaattttagatgaagcatctagttctttagacacctttacagagagaaaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ccnccaattttaattttagatgaagcatctagttctttagacacctttacagagagaaaa 900


Query: 901 atccaacaagcaatcaatgaagtatcaaaaggtagaacaacattggtcatagctcatagg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 atccaacaagcaatcaatgaagtatcaaaaggtagaacaacattggtcatagctcatagg 960


Query: 961 ctctccncaataattcattgtgatgaaattttggttttgaagggtggtcatatagtagag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ctctccncaataattcattgtgatgaaattttggttttgaagggtggtcatatagtagag 1020


Query: 1021 cgagggagtcactcttatctattggattttaatggtgactatgcccatctgtggaatcaa 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 cgagggagtcactcttatctattggattttaatggtgactatgcccatctgtggaatcaa 1080


Query: 1081 caacagctatcagccagtgatctccaatacacaccaaatcaagatacctttgagtaataa 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 caacagctatcagccagtgatctccaatacacaccaaatcaagatacctttgagtaataa 1140


Query: 1141 aagtgtatttttattattataataacncattgaatcnttttct 1183
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aagtgtatttttattattataataacncattgaatcnttttct 1183


>Contig-U10981-1 (Contig-U10981-1Q) /CSM_Contig/Contig-U10981-1Q.Seq.d
Length = 1510

Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus


Query: 796 ggtgaaaaacaaagggtttcaattgct 822
|||||||||||||| ||||||||||||
Sbjct: 1105 ggtgaaaaacaaagagtttcaattgct 1131


>Contig-U12059-1 (Contig-U12059-1Q) /CSM_Contig/Contig-U12059-1Q.Seq.d
Length = 1689

Score = 40.1 bits (20), Expect = 0.006
Identities = 20/20 (100%)
Strand = Plus / Minus


Query: 1146 tatttttattattataataa 1165
||||||||||||||||||||
Sbjct: 107 tatttttattattataataa 88


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 22,203
Number of Sequences: 6905
Number of extensions: 22203
Number of successful extensions: 3096
Number of sequences better than 10.0: 455
length of query: 1232
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1216
effective length of database: 5,564,391
effective search space: 6766299456
effective search space used: 6766299456
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.28
Homology vs DNA
Query= Contig-U11992-1 (Contig-U11992-1Q) /CSM_Contig/Contig-U11992-1Q.Seq.d
(1232 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ400380) Dictyostelium discoideum cDNA clone:dds13a02, 3' ... 1150 0.0 1
(BJ338522) Dictyostelium discoideum cDNA clone:dda61i21, 5' ... 854 0.0 2
(BJ391285) Dictyostelium discoideum cDNA clone:dds13a02, 5' ... 860 0.0 2
(BJ422239) Dictyostelium discoideum cDNA clone:ddv45f07, 5' ... 854 0.0 2
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 60 3e-10 2
(EJ778469) 1093011477543 Global-Ocean-Sampling_GS-30-02-01-1... 78 9e-10 1
(EJ082790) 1095460062991 Global-Ocean-Sampling_GS-26-01-01-1... 78 9e-10 1
(EJ957132) 1093018978299 Global-Ocean-Sampling_GS-30-02-01-1... 72 5e-08 1
(EJ950524) 1093018942011 Global-Ocean-Sampling_GS-30-02-01-1... 72 5e-08 1
(EJ844287) 1093017847382 Global-Ocean-Sampling_GS-30-02-01-1... 58 1e-06 2
(EJ655946) 1092955006434 Global-Ocean-Sampling_GS-30-02-01-1... 58 1e-06 2
(EJ664705) 1092955037229 Global-Ocean-Sampling_GS-30-02-01-1... 58 1e-06 2
(EJ746152) 1092962061701 Global-Ocean-Sampling_GS-30-02-01-1... 58 1e-06 2
(EJ772154) 1092970403832 Global-Ocean-Sampling_GS-30-02-01-1... 58 1e-06 2
(EJ843680) 1093017844690 Global-Ocean-Sampling_GS-30-02-01-1... 58 1e-06 2
(EJ819478) 1093017531107 Global-Ocean-Sampling_GS-30-02-01-1... 56 4e-06 2
(EJ818872) 1093017528611 Global-Ocean-Sampling_GS-30-02-01-1... 56 4e-06 2
(EJ955087) 1093018967916 Global-Ocean-Sampling_GS-30-02-01-1... 64 1e-05 1
(EJ854257) 1093017908725 Global-Ocean-Sampling_GS-30-02-01-1... 64 1e-05 1
(CU468230) Acinetobacter baumannii str. SDF, complete genome. 64 1e-05 1
(AM180355) Clostridium difficile 630 complete genome. 56 3e-05 18
(EJ539817) 1092955355862 Global-Ocean-Sampling_GS-29-01-01-1... 52 5e-05 2
(EJ584031) 1092961002035 Global-Ocean-Sampling_GS-29-01-01-1... 52 5e-05 2
(EJ775354) 1092991602454 Global-Ocean-Sampling_GS-30-02-01-1... 60 7e-05 2
(EJ761106) 1092963132049 Global-Ocean-Sampling_GS-30-02-01-1... 60 7e-05 2
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 42 2e-04 2
(EJ700685) 1092956033929 Global-Ocean-Sampling_GS-30-02-01-1... 60 2e-04 1
(EJ978126) 1093022134228 Global-Ocean-Sampling_GS-30-02-01-1... 58 8e-04 1
(EJ209026) 1092345394299 Global-Ocean-Sampling_GS-27-01-01-1... 58 8e-04 1
(CP000524) Bartonella bacilliformis KC583, complete genome. 58 8e-04 1
(CP000393) Trichodesmium erythraeum IMS101, complete genome. 58 8e-04 1
(AE015927) Clostridium tetani E88, complete genome. 58 8e-04 1
(EJ734972) 1092961095765 Global-Ocean-Sampling_GS-30-02-01-1... 40 0.003 2
(EJ736301) 1092961164049 Global-Ocean-Sampling_GS-30-02-01-1... 40 0.003 2
(AR320024) Sequence 2574 from patent US 6562958. 56 0.003 1
(EK229245) 1095460172723 Global-Ocean-Sampling_GS-31-01-01-1... 56 0.003 1
(EK039496) 1092959502706 Global-Ocean-Sampling_GS-31-01-01-1... 56 0.003 1
(EJ972020) 1093022089101 Global-Ocean-Sampling_GS-30-02-01-1... 56 0.003 1
(EJ893878) 1093018457617 Global-Ocean-Sampling_GS-30-02-01-1... 56 0.003 1
(EJ805868) 1093017459221 Global-Ocean-Sampling_GS-30-02-01-1... 56 0.003 1
(FK919648) EST_lsal_evj_959265 lsalevj mixed_tissue_mixed_st... 56 0.003 1
(FK919647) EST_lsal_evj_946209 lsalevj mixed_tissue_mixed_st... 56 0.003 1
(EX480767) EST_lsal_evj_790981 lsalevj mixed_tissue_mixed_st... 56 0.003 1
(EX480766) EST_lsal_evj_790597 lsalevj mixed_tissue_mixed_st... 56 0.003 1
(CU459141) Acinetobacter baumannii str. AYE, complete genome. 56 0.003 1
(CP000863) Acinetobacter baumannii ACICU, complete genome. 56 0.003 1
(CP000848) Rickettsia rickettsii str. 'Sheila Smith', comple... 56 0.003 1
(CP000766) Rickettsia rickettsii str. Iowa, complete genome. 56 0.003 1
(CP000683) Rickettsia massiliae MTU5, complete genome. 56 0.003 1
(CP000521) Acinetobacter baumannii ATCC 17978, complete genome. 56 0.003 1
(AE008615) Rickettsia conorii str. Malish 7, section 47 of 1... 56 0.003 1
(CP000728) Clostridium botulinum F str. Langeland, complete ... 46 0.013 16
(ER623045) 1093017474241 Global-Ocean-Sampling_GS-36-01-01-2... 54 0.013 1
(ER614788) 1093016343044 Global-Ocean-Sampling_GS-36-01-01-2... 54 0.013 1
(EK309798) 1095462393087 Global-Ocean-Sampling_GS-31-01-01-1... 54 0.013 1
(EK301382) 1095462365762 Global-Ocean-Sampling_GS-31-01-01-1... 54 0.013 1
(EJ964311) 1093022029934 Global-Ocean-Sampling_GS-30-02-01-1... 54 0.013 1
(EJ958525) 1093018985737 Global-Ocean-Sampling_GS-30-02-01-1... 54 0.013 1
(EJ919068) 1093018590717 Global-Ocean-Sampling_GS-30-02-01-1... 54 0.013 1
(EJ785132) 1093017310400 Global-Ocean-Sampling_GS-30-02-01-1... 54 0.013 1
(EJ785049) 1093017306362 Global-Ocean-Sampling_GS-30-02-01-1... 54 0.013 1
(EJ632543) 1092964807288 Global-Ocean-Sampling_GS-29-01-01-1... 54 0.013 1
(EJ625863) 1092963164594 Global-Ocean-Sampling_GS-29-01-01-1... 54 0.013 1
(EJ604483) 1092961220414 Global-Ocean-Sampling_GS-29-01-01-1... 54 0.013 1
(EJ447165) 1093015343263 Global-Ocean-Sampling_GS-28-01-01-1... 54 0.013 1
(EJ269338) 1095353000508 Global-Ocean-Sampling_GS-27-01-01-1... 54 0.013 1
(EJ045539) 1095454116042 Global-Ocean-Sampling_GS-26-01-01-1... 54 0.013 1
(CX578729) TTE00025003 Amplicon Express - Conjugative Form T... 54 0.013 1
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet... 54 0.013 1
(CP000409) Rickettsia canadensis str. McKiel, complete genome. 54 0.013 1
(CP000312) Clostridium perfringens SM101, complete genome. 54 0.013 1
(CP000246) Clostridium perfringens ATCC 13124, complete genome. 54 0.013 1
(EK002168) 1093025620739 Global-Ocean-Sampling_GS-30-02-01-1... 46 0.017 2
(DX572975) Phaseolus-Bat-7_01_P15.F Phaseolus-Bat-7 Phaseolu... 36 0.017 3
(AL445564) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 48 0.021 11
(AF466308) Dictyostelium discoideum ABC transporter AbcB5 (a... 46 0.022 2
(EK123234) 1092966000155 Global-Ocean-Sampling_GS-31-01-01-1... 42 0.041 2
(DD121958) STAPHYLOCOCCUS AUREUS PROTEINS AND NUCLEIC ACIDS. 52 0.051 1
(CS712689) Sequence 5229 from Patent EP1829892. 52 0.051 1
(AX622266) Sequence 5229 from Patent WO02094868. 52 0.051 1
(AR536531) Sequence 1093 from patent US 6737248. 52 0.051 1
(AR354975) Sequence 1093 from patent US 6593114. 52 0.051 1
(AC135873) Rattus norvegicus clone CH230-317O9, *** SEQUENCI... 52 0.051 1
(AC122580) Rattus norvegicus clone CH230-29H2, *** SEQUENCIN... 52 0.051 1
(EJ989891) 1093023039800 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.051 1
(EJ944883) 1093018908212 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.051 1
(EJ265224) 1095351006488 Global-Ocean-Sampling_GS-27-01-01-1... 52 0.051 1
(EJ054728) 1095456020479 Global-Ocean-Sampling_GS-26-01-01-1... 52 0.051 1
(ED182210) AUAC-aag24h09.b1 Ascaris suum whole genome shotgu... 52 0.051 1
(DR952471) EST1144010 Aquilegia cDNA library Aquilegia formo... 52 0.051 1
(CP000736) Staphylococcus aureus subsp. aureus JH1, complete... 52 0.051 1
(CP000730) Staphylococcus aureus subsp. aureus USA300_TCH151... 52 0.051 1
(CP000703) Staphylococcus aureus subsp. aureus JH9, complete... 52 0.051 1
(CP000410) Streptococcus pneumoniae D39, complete genome. 52 0.051 1
(CP000255) Staphylococcus aureus subsp. aureus USA300_FPR375... 52 0.051 1
(CP000253) Staphylococcus aureus subsp. aureus NCTC 8325, co... 52 0.051 1
(CP000046) Staphylococcus aureus subsp. aureus COL, complete... 52 0.051 1
(BX571857) Staphylococcus aureus strain MSSA476, complete ge... 52 0.051 1
(BX571856) Staphylococcus aureus subsp. aureus strain MRSA25... 52 0.051 1
(BA000033) Staphylococcus aureus subsp. aureus MW2 DNA, comp... 52 0.051 1

>(BJ400380) Dictyostelium discoideum cDNA clone:dds13a02, 3' end,
single read.
Length = 649

Score = 1150 bits (580), Expect = 0.0
Identities = 592/592 (100%)
Strand = Plus / Minus


Query: 585 aacgagtttaagatcaataattggagttgttccacaagaaacagttctctttaatgatac 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 aacgagtttaagatcaataattggagttgttccacaagaaacagttctctttaatgatac 590


Query: 645 tgtggcctataatattggctttggtaacagagaggcaaacgatgatcaattgattgatgc 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 tgtggcctataatattggctttggtaacagagaggcaaacgatgatcaattgattgatgc 530


Query: 705 ttctcgtcgtgctcaaatattgtcctttattgaatcatctcctgatggcttcagaactgt 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ttctcgtcgtgctcaaatattgtcctttattgaatcatctcctgatggcttcagaactgt 470


Query: 765 ggtaggcgaaanaggtttaagattgagtggtggtgaaaaacaaagggtttcaattgctag 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ggtaggcgaaanaggtttaagattgagtggtggtgaaaaacaaagggtttcaattgctag 410


Query: 825 agctttattaaaagatccnccaattttaattttagatgaagcatctagttctttagacac 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 agctttattaaaagatccnccaattttaattttagatgaagcatctagttctttagacac 350


Query: 885 ctttacagagagaaaaatccaacaagcaatcaatgaagtatcaaaaggtagaacaacatt 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ctttacagagagaaaaatccaacaagcaatcaatgaagtatcaaaaggtagaacaacatt 290


Query: 945 ggtcatagctcataggctctccncaataattcattgtgatgaaattttggttttgaaggg 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ggtcatagctcataggctctccncaataattcattgtgatgaaattttggttttgaaggg 230


Query: 1005 tggtcatatagtagagcgagggagtcactcttatctattggattttaatggtgactatgc 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tggtcatatagtagagcgagggagtcactcttatctattggattttaatggtgactatgc 170


Query: 1065 ccatctgtggaatcaacaacagctatcagccagtgatctccaatacacaccaaatcaaga 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 ccatctgtggaatcaacaacagctatcagccagtgatctccaatacacaccaaatcaaga 110


Query: 1125 tacctttgagtaataaaagtgtatttttattattataataacncattgaatc 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 tacctttgagtaataaaagtgtatttttattattataataacncattgaatc 58

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,602,524,796
Number of extensions: 105010695
Number of successful extensions: 9387174
Number of sequences better than 10.0: 389
Length of query: 1232
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1208
Effective length of database: 97,308,875,965
Effective search space: 117549122165720
Effective search space used: 117549122165720
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 1
Homology vs Protein
Query= Contig-U11992-1 (Contig-U11992-1Q) /CSM_Contig/Contig-U11992-1Q.Seq.d
(1232 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

CP000133_1396(CP000133|pid:none) Rhizobium etli CFN 42, complete... 216 1e-54
AM236080_1542(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 216 1e-54
CP001191_1014(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 214 4e-54
CP001074_1461(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 214 4e-54
CP000524_458(CP000524|pid:none) Bartonella bacilliformis KC583, ... 211 3e-53
CP001029_5179(CP001029|pid:none) Methylobacterium populi BJ001, ... 210 1e-52
CP000628_1217(CP000628|pid:none) Agrobacterium radiobacter K84 c... 209 2e-52
CP001562_531(CP001562|pid:none) Bartonella grahamii as4aup, comp... 209 2e-52
CP001510_4825(CP001510|pid:none) Methylobacterium extorquens AM1... 208 3e-52
CP001298_5000(CP001298|pid:none) Methylobacterium chloromethanic... 208 3e-52
AE007869_1046(AE007869|pid:none) Agrobacterium tumefaciens str. ... 207 5e-52
CP000116_1273(CP000116|pid:none) Thiobacillus denitrificans ATCC... 207 6e-52
CP000738_718(CP000738|pid:none) Sinorhizobium medicae WSM419, co... 206 1e-51
AE008917_1491(AE008917|pid:none) Brucella melitensis 16M chromos... 206 1e-51
AE014291_427(AE014291|pid:none) Brucella suis 1330 chromosome I,... 206 1e-51
CP001196_2474(CP001196|pid:none) Oligotropha carboxidovorans OM5... 205 2e-51
CP000390_967(CP000390|pid:none) Mesorhizobium sp. BNC1, complete... 204 7e-51
AP009384_1507(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 204 7e-51
CP001349_1434(CP001349|pid:none) Methylobacterium nodulans ORS 2... 203 9e-51
AE017223_436(AE017223|pid:none) Brucella abortus biovar 1 str. 9... 202 2e-50
CP000633_1085(CP000633|pid:none) Agrobacterium vitis S4 chromoso... 202 2e-50
CP000781_4147(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 202 2e-50
CP001280_137(CP001280|pid:none) Methylocella silvestris BL2, com... 202 2e-50
CP001016_1874(CP001016|pid:none) Beijerinckia indica subsp. indi... 201 3e-50
CP000250_3352(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 201 4e-50
CP001339_1663(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, ... 200 8e-50
BA000012_6160(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 200 8e-50
CP000758_554(CP000758|pid:none) Ochrobactrum anthropi ATCC 49188... 200 1e-49
CP000283_2069(CP000283|pid:none) Rhodopseudomonas palustris BisB... 199 1e-49
CP000453_386(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-1... 199 1e-49
CP001503_2917(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 198 3e-49
AE016825_2184(AE016825|pid:none) Chromobacterium violaceum ATCC ... 197 5e-49
CP000570_685(CP000570|pid:none) Burkholderia pseudomallei 668 ch... 197 5e-49
CP000124_857(CP000124|pid:none) Burkholderia pseudomallei 1710b ... 197 5e-49
AE017197_189(AE017197|pid:none) Rickettsia typhi str. Wilmington... 197 6e-49
CP000683_198(CP000683|pid:none) Rickettsia massiliae MTU5, compl... 197 6e-49
CP000720_2923(CP000720|pid:none) Yersinia pseudotuberculosis IP ... 197 8e-49
AE017042_1092(AE017042|pid:none) Yersinia pestis biovar Microtus... 197 8e-49
BA000040_3795(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 196 1e-48
CP000319_1412(CP000319|pid:none) Nitrobacter hamburgensis X14, c... 196 1e-48
CP000087_1092(CP000087|pid:none) Rickettsia bellii RML369-C, com... 196 1e-48
CP000352_391(CP000352|pid:none) Ralstonia metallidurans CH34, co... 196 2e-48
CP000053_1057(CP000053|pid:none) Rickettsia felis URRWXCal2, com... 196 2e-48
CP000158_1226(CP000158|pid:none) Hyphomonas neptunium ATCC 15444... 195 3e-48
CP000267_3437(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 194 4e-48
CP000103_680(CP000103|pid:none) Nitrosospira multiformis ATCC 25... 194 4e-48
CP000091_925(CP000091|pid:none) Ralstonia eutropha JMP134 chromo... 194 5e-48
AM260479_464(AM260479|pid:none) Ralstonia eutropha H16 chromosom... 194 5e-48
CP000151_2852(CP000151|pid:none) Burkholderia sp. 383 chromosome... 194 7e-48
CP000655_1880(CP000655|pid:none) Polynucleobacter necessarius su... 194 7e-48
AM747720_892(AM747720|pid:none) Burkholderia cenocepacia J2315 c... 193 9e-48
AP009385_2621(AP009385|pid:none) Burkholderia multivorans ATCC 1... 193 9e-48
BX640446_157(BX640446|pid:none) Bordetella bronchiseptica strain... 193 1e-47
CP000090_452(CP000090|pid:none) Ralstonia eutropha JMP134 chromo... 192 2e-47
CP000269_277(CP000269|pid:none) Janthinobacterium sp. Marseille,... 192 2e-47
CP001052_643(CP001052|pid:none) Burkholderia phytofirmans PsJN c... 192 2e-47
CP000958_2720(CP000958|pid:none) Burkholderia cenocepacia MC0-3 ... 192 2e-47
CP000378_2087(CP000378|pid:none) Burkholderia cenocepacia AU 105... 192 2e-47
BX640427_333(BX640427|pid:none) Bordetella parapertussis strain ... 192 3e-47
CU234118_4450(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 191 4e-47
CP000514_9(CP000514|pid:none) Marinobacter aquaeolei VT8, comple... 191 4e-47
(Q5B1Q2) RecName: Full=Iron-sulfur clusters transporter atm1, mi... 191 4e-47
CP000494_3292(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 191 4e-47
CU861906_471(CU861906|pid:none) Ralstonia solanacearum strain Mo... 191 5e-47
AY705372_3(AY705372|pid:none) Comamonas testosteroni strain BR60... 191 5e-47
CP001068_345(CP001068|pid:none) Ralstonia pickettii 12J chromoso... 191 6e-47
CP000616_231(CP000616|pid:none) Burkholderia vietnamiensis G4 ch... 190 8e-47
CP000960_17(CP000960|pid:none) Burkholderia cenocepacia MC0-3 ch... 190 8e-47
CP001154_1404(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 190 1e-46
CP000460_572(CP000460|pid:none) Burkholderia cenocepacia HI2424 ... 190 1e-46
CP000378_1378(CP000378|pid:none) Burkholderia cenocepacia AU 105... 190 1e-46
CP000377_980(CP000377|pid:none) Silicibacter sp. TM1040, complet... 189 2e-46
CP000577_1343(CP000577|pid:none) Rhodobacter sphaeroides ATCC 17... 189 2e-46
CP000394_612(CP000394|pid:none) Granulibacter bethesdensis CGDNI... 189 2e-46
CP000362_1657(CP000362|pid:none) Roseobacter denitrificans OCh 1... 189 2e-46
CU633749_404(CU633749|pid:none) Cupriavidus taiwanensis str. LMG... 189 2e-46
CP000143_1282(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c... 188 3e-46
CP001027_874(CP001027|pid:none) Burkholderia ambifaria MC40-6 ch... 188 3e-46
CP001069_1086(CP001069|pid:none) Ralstonia pickettii 12J chromos... 188 3e-46
CP000510_2464(CP000510|pid:none) Psychromonas ingrahamii 37, com... 188 3e-46
CP000529_3430(CP000529|pid:none) Polaromonas naphthalenivorans C... 188 4e-46
CP000544_150(CP000544|pid:none) Halorhodospira halophila SL1, co... 187 5e-46
CR954201_53(CR954201|pid:none) Ostreococcus tauri strain OTTH059... 187 5e-46
CR555306_3928(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 187 5e-46
CP001013_4004(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 187 5e-46
CP001392_572(CP001392|pid:none) Diaphorobacter sp. TPSY, complet... 187 5e-46
CP000661_1847(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17... 187 7e-46
CP000539_593(CP000539|pid:none) Acidovorax sp. JS42, complete ge... 187 7e-46
CP000571_3159(CP000571|pid:none) Burkholderia pseudomallei 668 c... 187 9e-46
CP000573_3030(CP000573|pid:none) Burkholderia pseudomallei 1106a... 187 9e-46
AM270183_21(AM270183|pid:none) Aspergillus niger contig An08c028... 187 9e-46
CP000011_1908(CP000011|pid:none) Burkholderia mallei ATCC 23344 ... 187 9e-46
AM286415_2877(AM286415|pid:none) Yersinia enterocolitica subsp. ... 187 9e-46
CP000525_993(CP000525|pid:none) Burkholderia mallei SAVP1 chromo... 187 9e-46
(Q4WLN7) RecName: Full=Iron-sulfur clusters transporter atm1, mi... 186 1e-45
CP000555_439(CP000555|pid:none) Methylibium petroleiphilum PM1, ... 186 2e-45
CP000547_2244(CP000547|pid:none) Burkholderia mallei NCTC 10247 ... 185 3e-45
CP001103_2176(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 185 3e-45
CP000155_502(CP000155|pid:none) Hahella chejuensis KCTC 2396, co... 184 4e-45
CP001635_813(CP001635|pid:none) Variovorax paradoxus S110 chromo... 184 4e-45
CP001281_769(CP001281|pid:none) Thauera sp. MZ1T, complete genome. 184 4e-45
AY327516_1(AY327516|pid:none) Chlamydomonas reinhardtii ATP-bind... 184 6e-45
AM910994_583(AM910994|pid:none) Plasmodium knowlesi strain H chr... 183 1e-44
AM270139_10(AM270139|pid:none) Aspergillus niger contig An07c022... 182 2e-44
AF497513_1(AF497513|pid:none) Caenorhabditis elegans heavy metal... 182 2e-44
CP000512_4002(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 182 2e-44
FN357697_16(FN357697|pid:none) Schistosoma mansoni genome sequen... 181 5e-44
AX244149_1(AX244149|pid:none) Sequence 1 from Patent WO0166732. 181 6e-44
BC043423_1(BC043423|pid:none) Homo sapiens ATP-binding cassette,... 181 6e-44
AK057026_1(AK057026|pid:none) Homo sapiens cDNA FLJ32464 fis, cl... 181 6e-44
AF308472_1(AF308472|pid:none) Homo sapiens ATP-binding cassette ... 181 6e-44
AK172812_1(AK172812|pid:none) Homo sapiens cDNA FLJ23973 fis, cl... 181 6e-44
AF070598_1(AF070598|pid:none) Homo sapiens clone 24410 ABC trans... 181 6e-44
AM920437_179(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 180 8e-44
AJ272202_1(AJ272202|pid:none) Arabidopsis thaliana mRNA for mito... 180 8e-44
AK151165_1(AK151165|pid:none) Mus musculus bone marrow macrophag... 180 8e-44
CP001614_3419(CP001614|pid:none) Teredinibacter turnerae T7901, ... 180 8e-44
Z97208_1(Z97208|pid:none) S.pombe chromosome I cosmid c15A10. 180 8e-44
AB019228_14(AB019228|pid:none) Arabidopsis thaliana genomic DNA,... 180 8e-44
CP000821_937(CP000821|pid:none) Shewanella sediminis HAW-EB3, co... 180 8e-44
(O70595) RecName: Full=ATP-binding cassette sub-family B member ... 180 8e-44
AE017354_2022(AE017354|pid:none) Legionella pneumophila subsp. p... 180 1e-43
BA000004_3891(BA000004|pid:none) Bacillus halodurans C-125 DNA, ... 179 1e-43
AX088016_1(AX088016|pid:none) Sequence 1 from Patent WO0114547. ... 179 1e-43
BC140637_1(BC140637|pid:none) Bos taurus ATP-binding cassette, s... 179 1e-43
AP007154_29(AP007154|pid:none) Aspergillus oryzae RIB40 genomic ... 179 2e-43
AE017348_132(AE017348|pid:none) Cryptococcus neoformans var. neo... 179 2e-43
CP000472_3927(CP000472|pid:none) Shewanella piezotolerans WP3, c... 179 2e-43
AF287698_1(AF287698|pid:none) Arabidopsis thaliana half-molecule... 179 2e-43
(Q2HIE9) RecName: Full=Iron-sulfur clusters transporter ATM1, mi... 179 2e-43
CP000851_837(CP000851|pid:none) Shewanella pealeana ATCC 700345,... 179 2e-43
AP007159_577(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 177 5e-43
T18376(T18376) multidrug resistance protein 2 - malaria parasite... 177 9e-43
L13381_1(L13381|pid:none) Plasmodium falciparum HB3\W2 transport... 177 9e-43
AE014187_453(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 177 9e-43
CP000931_893(CP000931|pid:none) Shewanella halifaxensis HAW-EB4,... 177 9e-43
AL031546_9(AL031546|pid:none) S.pombe chromosome III cosmid c737. 176 1e-42
(Q02592) RecName: Full=Heavy metal tolerance protein; Flags: Pre... 176 1e-42
AP009153_639(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DNA... 176 1e-42
CP000581_53(CP000581|pid:none) Ostreococcus lucimarinus CCE9901 ... 176 2e-42
AE017354_1790(AE017354|pid:none) Legionella pneumophila subsp. p... 176 2e-42
CP000934_141(CP000934|pid:none) Cellvibrio japonicus Ueda107, co... 176 2e-42
(Q2LVL0) RecName: Full=Lipid A export ATP-binding/permease prote... 176 2e-42
CP000759_577(CP000759|pid:none) Ochrobactrum anthropi ATCC 49188... 175 3e-42
AM849034_122(AM849034|pid:none) Clavibacter michiganensis subsp.... 174 4e-42
CR940348_225(CR940348|pid:none) Theileria annulata strain Ankara... 174 4e-42
(Q4HVU7) RecName: Full=Iron-sulfur clusters transporter ATM1, mi... 174 4e-42
AP007163_54(AP007163|pid:none) Aspergillus oryzae RIB40 genomic ... 174 4e-42
AM286415_1668(AM286415|pid:none) Yersinia enterocolitica subsp. ... 174 6e-42
CP000503_703(CP000503|pid:none) Shewanella sp. W3-18-1, complete... 174 6e-42
AM993099_3(AM993099|pid:none) Pseudomonas aeruginosa transposon ... 174 8e-42
CP001087_1807(CP001087|pid:none) Desulfobacterium autotrophicum ... 173 1e-41
(Q5WVN2) RecName: Full=Lipid A export ATP-binding/permease prote... 173 1e-41
CP000447_627(CP000447|pid:none) Shewanella frigidimarina NCIMB 4... 173 1e-41
AE016822_230(AE016822|pid:none) Leifsonia xyli subsp. xyli str. ... 173 1e-41
CP000087_282(CP000087|pid:none) Rickettsia bellii RML369-C, comp... 173 1e-41
CP000939_339(CP000939|pid:none) Clostridium botulinum B1 str. Ok... 173 1e-41
CP000849_1184(CP000849|pid:none) Rickettsia bellii OSU 85-389, c... 173 1e-41
AE015929_1550(AE015929|pid:none) Staphylococcus epidermidis ATCC... 172 2e-41
BX950851_2393(BX950851|pid:none) Erwinia carotovora subsp. atros... 172 2e-41
CP000726_306(CP000726|pid:none) Clostridium botulinum A str. ATC... 172 2e-41
CP000593_77(CP000593|pid:none) Ostreococcus lucimarinus CCE9901 ... 172 3e-41
CP001083_313(CP001083|pid:none) Clostridium botulinum Ba4 str. 6... 172 3e-41
CP000507_655(CP000507|pid:none) Shewanella amazonensis SB2B, com... 172 3e-41
CP001577_24(CP001577|pid:none) Micromonas sp. RCC299 chromosome ... 171 4e-41
(Q6AJW3) RecName: Full=Lipid A export ATP-binding/permease prote... 171 4e-41
CP000444_594(CP000444|pid:none) Shewanella sp. MR-7, complete ge... 171 4e-41
CP001326_19(CP001326|pid:none) Micromonas sp. RCC299 chromosome ... 171 5e-41
CR628336_1588(CR628336|pid:none) Legionella pneumophila str. Par... 171 5e-41
(Q0A4U4) RecName: Full=Lipid A export ATP-binding/permease prote... 171 5e-41
AE014296_320(AE014296|pid:none) Drosophila melanogaster chromoso... 171 5e-41
AF466305_1(AF466305|pid:none) Dictyostelium discoideum ABC trans... 171 6e-41
CR628336_1243(CR628336|pid:none) Legionella pneumophila str. Par... 171 6e-41
CP000667_2174(CP000667|pid:none) Salinispora tropica CNB-440, co... 171 6e-41
(Q2FFM9) RecName: Full=Putative multidrug export ATP-binding/per... 171 6e-41
BA000028_1405(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 171 6e-41
CP000490_1348(CP000490|pid:none) Paracoccus denitrificans PD1222... 171 6e-41
CP000629_1148(CP000629|pid:none) Agrobacterium radiobacter K84 c... 171 6e-41
AL009126_900(AL009126|pid:none) Bacillus subtilis subsp. subtili... 170 8e-41
CP001252_3579(CP001252|pid:none) Shewanella baltica OS223, compl... 170 8e-41
AE017354_1252(AE017354|pid:none) Legionella pneumophila subsp. p... 170 8e-41
CP000675_1362(CP000675|pid:none) Legionella pneumophila str. Cor... 170 8e-41
(P71082) RecName: Full=Putative multidrug export ATP-binding/per... 170 8e-41
CP000591_292(CP000591|pid:none) Ostreococcus lucimarinus CCE9901... 170 1e-40
CP000248_2618(CP000248|pid:none) Novosphingobium aromaticivorans... 170 1e-40
CP000446_3340(CP000446|pid:none) Shewanella sp. MR-4, complete g... 170 1e-40
AE017354_1587(AE017354|pid:none) Legionella pneumophila subsp. p... 170 1e-40
(Q7RX59) RecName: Full=Iron-sulfur clusters transporter atm-1, m... 169 1e-40
CP001365_78(CP001365|pid:none) Halorubrum lacusprofundi ATCC 492... 169 1e-40
(Q47JR8) RecName: Full=Lipid A export ATP-binding/permease prote... 169 2e-40
(Q7NZU6) RecName: Full=Lipid A export ATP-binding/permease prote... 169 2e-40
AP009484_1691(AP009484|pid:none) Macrococcus caseolyticus JCSC54... 169 2e-40
AP006841_229(AP006841|pid:none) Bacteroides fragilis YCH46 DNA, ... 169 2e-40
CP000606_852(CP000606|pid:none) Shewanella loihica PV-4, complet... 169 2e-40
CR628337_1418(CR628337|pid:none) Legionella pneumophila str. Len... 169 2e-40
AJ878596_1(AJ878596|pid:none) Rhizopus stolonifer abc1 gene for ... 169 2e-40
BA000030_1570(BA000030|pid:none) Streptomyces avermitilis MA-468... 169 2e-40
AP006716_1095(AP006716|pid:none) Staphylococcus haemolyticus JCS... 169 2e-40
AM295250_1429(AM295250|pid:none) Staphylococcus carnosus subsp. ... 169 2e-40
AM902716_3121(AM902716|pid:none) Bordetella petrii strain DSM 12... 168 3e-40
CU459003_3874(CU459003|pid:none) Magnetospirillum gryphiswaldens... 168 3e-40
CP001336_1785(CP001336|pid:none) Desulfitobacterium hafniense DC... 168 3e-40
AP006627_1493(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 168 3e-40
AM747720_2404(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 168 3e-40
(Q2YU20) RecName: Full=Putative multidrug export ATP-binding/per... 168 3e-40
CP000555_2045(CP000555|pid:none) Methylibium petroleiphilum PM1,... 168 4e-40
AJ965256_1354(AJ965256|pid:none) Dehalococcoides sp. CBDB1 compl... 168 4e-40
CP001275_1489(CP001275|pid:none) Thermomicrobium roseum DSM 5159... 168 4e-40
CP001322_1783(CP001322|pid:none) Desulfatibacillum alkenivorans ... 168 4e-40
CP000908_4768(CP000908|pid:none) Methylobacterium extorquens PA1... 167 5e-40
CP000142_1364(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 167 5e-40
AP008230_1210(AP008230|pid:none) Desulfitobacterium hafniense Y5... 167 5e-40
CP000514_1717(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 167 5e-40
CP000951_1478(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 167 5e-40
AF1879(AF1879) ATP-binding protein of ABC transporter alr0583 [i... 167 5e-40
CP000901_1528(CP000901|pid:none) Yersinia pestis Angola, complet... 167 7e-40
CP000720_2354(CP000720|pid:none) Yersinia pseudotuberculosis IP ... 167 7e-40
CP000117_325(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 167 7e-40
CP001581_324(CP001581|pid:none) Clostridium botulinum A2 str. Ky... 167 7e-40
CP001078_2220(CP001078|pid:none) Clostridium botulinum E3 str. A... 167 7e-40
CU633438_243(CU633438|pid:none) Podospora anserina genomic DNA c... 167 7e-40
CP000813_802(CP000813|pid:none) Bacillus pumilus SAFR-032, compl... 167 7e-40
CP000613_1038(CP000613|pid:none) Rhodospirillum centenum SW, com... 167 7e-40
AP008230_3573(AP008230|pid:none) Desulfitobacterium hafniense Y5... 167 9e-40
CP000764_429(CP000764|pid:none) Bacillus cereus subsp. cytotoxis... 167 9e-40
CP001154_2931(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 167 9e-40
CP000254_184(CP000254|pid:none) Methanospirillum hungatei JF-1, ... 167 9e-40
CP001581_1352(CP001581|pid:none) Clostridium botulinum A2 str. K... 167 9e-40
CP001056_2462(CP001056|pid:none) Clostridium botulinum B str. Ek... 167 9e-40
CP001083_1276(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 166 1e-39
A97099(A97099) ABC-type multidrug/protein/lipid transport system... 166 1e-39
DQ097235_1(DQ097235|pid:none) Toxoplasma gondii ATP-binding cass... 166 1e-39
AE016877_4937(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 166 1e-39
CP000939_1304(CP000939|pid:none) Clostridium botulinum B1 str. O... 166 2e-39
AE016879_5011(AE016879|pid:none) Bacillus anthracis str. Ames, c... 166 2e-39
CP001348_3252(CP001348|pid:none) Clostridium cellulolyticum H10,... 166 2e-39
AE017355_4809(AE017355|pid:none) Bacillus thuringiensis serovar ... 166 2e-39
CP000962_1361(CP000962|pid:none) Clostridium botulinum A3 str. L... 166 2e-39
CP001186_5159(CP001186|pid:none) Bacillus cereus G9842, complete... 166 2e-39
AE004437_102(AE004437|pid:none) Halobacterium sp. NRC-1, complet... 166 2e-39
BA000039_961(BA000039|pid:none) Thermosynechococcus elongatus BP... 166 2e-39
(Q9C7F2) RecName: Full=Multidrug resistance protein 12; AltName:... 166 2e-39
(Q2KYS6) RecName: Full=Lipid A export ATP-binding/permease prote... 166 2e-39
CP000943_2878(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 165 3e-39
CP000721_1035(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 165 3e-39
(Q3SFZ6) RecName: Full=Lipid A export ATP-binding/permease prote... 165 3e-39
CP000679_1061(CP000679|pid:none) Caldicellulosiruptor saccharoly... 165 3e-39
BX511082_1(BX511082|pid:none) Zebrafish DNA sequence from clone ... 165 3e-39
CP000713_1380(CP000713|pid:none) Psychrobacter sp. PRwf-1, compl... 165 3e-39
CR936257_3(CR936257|pid:none) Natronomonas pharaonis DSM 2160 co... 165 3e-39
CP001001_1277(CP001001|pid:none) Methylobacterium radiotolerans ... 165 3e-39
D87789(D87789)protein C34G6.4 [imported] - Caenorhabditis elegans 165 3e-39
AE017226_2247(AE017226|pid:none) Treponema denticola ATCC 35405,... 165 3e-39
B97569(B97569)ABC transporter (ATP-binding protein) (AP001520) [... 165 4e-39
CP000438_5311(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 165 4e-39
CP000269_535(CP000269|pid:none) Janthinobacterium sp. Marseille,... 165 4e-39
CP001298_2154(CP001298|pid:none) Methylobacterium chloromethanic... 165 4e-39
AC2790(AC2790) hypothetical protein Atu1738 [imported] - Agrobac... 165 4e-39
AM398681_1107(AM398681|pid:none) Flavobacterium psychrophilum JI... 165 4e-39
AY596297_1665(AY596297|pid:none) Haloarcula marismortui ATCC 430... 165 4e-39
BA000028_900(BA000028|pid:none) Oceanobacillus iheyensis HTE831 ... 165 4e-39
CP000254_182(CP000254|pid:none) Methanospirillum hungatei JF-1, ... 164 5e-39
CP000613_1789(CP000613|pid:none) Rhodospirillum centenum SW, com... 164 5e-39
AP007255_4090(AP007255|pid:none) Magnetospirillum magneticum AMB... 164 5e-39
BA000038_687(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, chr... 164 5e-39
CP000124_1344(CP000124|pid:none) Burkholderia pseudomallei 1710b... 164 6e-39
(Q8EDF0) RecName: Full=Lipid A export ATP-binding/permease prote... 164 6e-39
BA000004_1125(BA000004|pid:none) Bacillus halodurans C-125 DNA, ... 164 6e-39
CP001102_322(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 164 6e-39
CP000111_1197(CP000111|pid:none) Prochlorococcus marinus str. MI... 164 6e-39
CP001019_1021(CP001019|pid:none) Coxiella burnetii CbuG_Q212, co... 164 6e-39
CP001020_649(CP001020|pid:none) Coxiella burnetii CbuK_Q154, com... 164 6e-39
CP000010_1646(CP000010|pid:none) Burkholderia mallei ATCC 23344 ... 164 6e-39
CP000729_24(CP000729|pid:none) Clostridium botulinum F str. Lang... 164 6e-39
CP000002_3912(CP000002|pid:none) Bacillus licheniformis ATCC 145... 164 8e-39
CP000962_485(CP000962|pid:none) Clostridium botulinum A3 str. Lo... 164 8e-39
CP000312_2206(CP000312|pid:none) Clostridium perfringens SM101, ... 164 8e-39
AE017333_3921(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 164 8e-39
CP001151_159(CP001151|pid:none) Rhodobacter sphaeroides KD131 ch... 164 8e-39
BC155341_1(BC155341|pid:none) Danio rerio ATP-binding cassette, ... 164 8e-39
BA000016_2296(BA000016|pid:none) Clostridium perfringens str. 13... 164 8e-39
CP001638_444(CP001638|pid:none) Geobacillus sp. WCH70, complete ... 163 1e-38
CP000144_107(CP000144|pid:none) Rhodobacter sphaeroides 2.4.1 ch... 163 1e-38
CP000312_297(CP000312|pid:none) Clostridium perfringens SM101, c... 163 1e-38
CP000822_2101(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 163 1e-38
(Q2SZW0) RecName: Full=Lipid A export ATP-binding/permease prote... 163 1e-38
(Q5QU36) RecName: Full=Lipid A export ATP-binding/permease prote... 163 1e-38
CP001029_1921(CP001029|pid:none) Methylobacterium populi BJ001, ... 163 1e-38
CP000817_298(CP000817|pid:none) Lysinibacillus sphaericus C3-41,... 163 1e-38
AP008934_927(AP008934|pid:none) Staphylococcus saprophyticus sub... 163 1e-38
(Q0HHH4) RecName: Full=Lipid A export ATP-binding/permease prote... 163 1e-38
CP000903_441(CP000903|pid:none) Bacillus weihenstephanensis KBAB... 163 1e-38
(Q7W9N7) RecName: Full=Lipid A export ATP-binding/permease prote... 163 1e-38
CP000672_457(CP000672|pid:none) Haemophilus influenzae PittGG, c... 163 1e-38
BA000032_792(BA000032|pid:none) Vibrio parahaemolyticus RIMD 221... 163 1e-38
CP001124_835(CP001124|pid:none) Geobacter bemidjiensis Bem, comp... 163 1e-38
CP000806_1711(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 163 1e-38
(Q7VWD8) RecName: Full=Lipid A export ATP-binding/permease prote... 163 1e-38
AE017333_1552(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 163 1e-38
CP000685_2799(CP000685|pid:none) Flavobacterium johnsoniae UW101... 162 2e-38
AE016796_172(AE016796|pid:none) Vibrio vulnificus CMCP6 chromoso... 162 2e-38
(Q83LP0) RecName: Full=Lipid A export ATP-binding/permease prote... 162 2e-38
CU207366_1042(CU207366|pid:none) Gramella forsetii KT0803 comple... 162 2e-38
CP001157_1157(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 162 2e-38
(Q60AA3) RecName: Full=Lipid A export ATP-binding/permease prote... 162 2e-38
(Q3Z3K7) RecName: Full=Lipid A export ATP-binding/permease prote... 162 2e-38
CP000820_1635(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 162 2e-38
AE017354_2194(AE017354|pid:none) Legionella pneumophila subsp. p... 162 2e-38
CP001186_442(CP001186|pid:none) Bacillus cereus G9842, complete ... 162 2e-38
CP000662_619(CP000662|pid:none) Rhodobacter sphaeroides ATCC 170... 162 2e-38
AP009153_2582(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 162 2e-38
FM954972_1469(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 162 2e-38
BT066367_1(BT066367|pid:none) Zea mays full-length cDNA clone ZM... 162 2e-38
CP000939_1060(CP000939|pid:none) Clostridium botulinum B1 str. O... 162 2e-38
CP001107_97(CP001107|pid:none) Eubacterium rectale ATCC 33656, c... 162 2e-38
AM746676_2654(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 162 2e-38
CP000828_4176(CP000828|pid:none) Acaryochloris marina MBIC11017,... 162 2e-38
CP000880_1904(CP000880|pid:none) Salmonella enterica subsp. ariz... 162 2e-38
CP001102_251(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 162 2e-38
(P63359) RecName: Full=Lipid A export ATP-binding/permease prote... 162 2e-38
CP000783_2367(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 162 2e-38
CP000469_2566(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 162 2e-38
BT034203_1(BT034203|pid:none) Zea mays full-length cDNA clone ZM... 162 2e-38
CP000875_680(CP000875|pid:none) Herpetosiphon aurantiacus ATCC 2... 162 2e-38
CP000675_2323(CP000675|pid:none) Legionella pneumophila str. Cor... 162 2e-38
CP000133_2336(CP000133|pid:none) Rhizobium etli CFN 42, complete... 162 2e-38
AP006618_5628(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 162 3e-38
AY458636_24(AY458636|pid:none) Uncultured marine bacterium 439 c... 162 3e-38
FM180568_907(FM180568|pid:none) Escherichia coli 0127:H6 E2348/6... 162 3e-38
BA000040_5932(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 162 3e-38
CP001390_2080(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 162 3e-38
(Q0VQP5) RecName: Full=Lipid A export ATP-binding/permease prote... 162 3e-38
CP001252_2619(CP001252|pid:none) Shewanella baltica OS223, compl... 161 4e-38
CP000964_3552(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 161 4e-38
(Q2J0F4) RecName: Full=Beta-(1-- &2)glucan export ATP- &CP000250... 161 4e-38
(Q20Z38) RecName: Full=Beta-(1-- &2)glucan export ATP- &CP000301... 161 4e-38
CP000686_41(CP000686|pid:none) Roseiflexus sp. RS-1, complete ge... 161 4e-38
AE016879_491(AE016879|pid:none) Bacillus anthracis str. Ames, co... 161 4e-38
CP000127_92(CP000127|pid:none) Nitrosococcus oceani ATCC 19707, ... 161 4e-38
CP000563_1657(CP000563|pid:none) Shewanella baltica OS155, compl... 161 4e-38
(Q5RKI8) RecName: Full=ATP-binding cassette sub-family B member ... 161 4e-38
CP000828_5581(CP000828|pid:none) Acaryochloris marina MBIC11017,... 161 5e-38
CP000667_3023(CP000667|pid:none) Salinispora tropica CNB-440, co... 161 5e-38
CP000653_1423(CP000653|pid:none) Enterobacter sp. 638, complete ... 161 5e-38
(Q6D437) RecName: Full=Lipid A export ATP-binding/permease prote... 161 5e-38
AM412317_1051(AM412317|pid:none) Clostridium botulinum A str. AT... 161 5e-38
CP000140_2354(CP000140|pid:none) Parabacteroides distasonis ATCC... 161 5e-38
(Q5PGH0) RecName: Full=Lipid A export ATP-binding/permease prote... 161 5e-38
CP001146_1472(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 161 5e-38
CP000568_2952(CP000568|pid:none) Clostridium thermocellum ATCC 2... 161 5e-38
DQ094190_1(DQ094190|pid:none) Toxoplasma gondii ATP-binding cass... 161 5e-38
CP001291_4322(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 161 5e-38
CP000853_2638(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 161 5e-38
BX950851_2532(BX950851|pid:none) Erwinia carotovora subsp. atros... 161 5e-38
AD2074(AD2074) ATP-binding protein of ABC transporter all2146 [i... 161 5e-38
AE017197_197(AE017197|pid:none) Rickettsia typhi str. Wilmington... 161 5e-38
CP000781_1910(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 161 5e-38
AF490975_1(AF490975|pid:none) Caenorhabditis elegans ABC7 protei... 161 5e-38
AP009552_5909(AP009552|pid:none) Microcystis aeruginosa NIES-843... 161 5e-38
AK076315_1(AK076315|pid:none) Mus musculus 10 days neonate skin ... 160 7e-38
CP000728_1041(CP000728|pid:none) Clostridium botulinum F str. La... 160 7e-38
CP000934_507(CP000934|pid:none) Cellvibrio japonicus Ueda107, co... 160 7e-38
(Q1QX69) RecName: Full=Lipid A export ATP-binding/permease prote... 160 7e-38
(Q21WN9) RecName: Full=Lipid A export ATP-binding/permease prote... 160 7e-38
BT059176_1(BT059176|pid:none) Salmo salar clone ssal-rgf-530-254... 160 7e-38
CP000909_2821(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 160 7e-38
CP001052_1217(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 160 7e-38
(Q7N6C6) RecName: Full=Lipid A export ATP-binding/permease prote... 160 7e-38
AF216497_1(AF216497|pid:none) Gossypium hirsutum P-glycoprotein ... 160 7e-38
CP000117_3001(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 160 7e-38
CP000557_469(CP000557|pid:none) Geobacillus thermodenitrificans ... 160 9e-38
CP000769_3201(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 160 9e-38
CP000679_2116(CP000679|pid:none) Caldicellulosiruptor saccharoly... 160 9e-38
CP000485_434(CP000485|pid:none) Bacillus thuringiensis str. Al H... 160 9e-38
CP000100_2107(CP000100|pid:none) Synechococcus elongatus PCC 794... 160 9e-38
AM398681_815(AM398681|pid:none) Flavobacterium psychrophilum JIP... 160 9e-38
CR378679_159(CR378679|pid:none) Photobacterium profundum SS9 chr... 160 9e-38
EU480943_1(EU480943|pid:none) Caenorhabditis remanei strain SB14... 160 9e-38
CP001321_1863(CP001321|pid:none) Haemophilus parasuis SH0165, co... 160 9e-38
AE017194_5250(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 160 9e-38
EU874252_5(EU874252|pid:none) Uncultured soil bacterium clone B1... 160 9e-38
Z70265_3(Z70265|pid:none) Caenorhabditis elegans Cosmid C05A9, c... 160 9e-38
AJ535071_1(AJ535071|pid:none) Oryza sativa (japonica cultivar-gr... 160 9e-38
FB905832_1(FB905832|pid:none) Sequence 125105 from Patent WO2008... 160 9e-38
EU480932_1(EU480932|pid:none) Caenorhabditis remanei strain PB21... 160 1e-37
FM242711_832(FM242711|pid:none) Listeria monocytogenes Clip81459... 160 1e-37
AM420293_3417(AM420293|pid:none) Saccharopolyspora erythraea NRR... 160 1e-37
(Q142P6) RecName: Full=Lipid A export ATP-binding/permease prote... 160 1e-37
CP000962_1111(CP000962|pid:none) Clostridium botulinum A3 str. L... 160 1e-37
CP000961_1802(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 160 1e-37
EU480928_1(EU480928|pid:none) Caenorhabditis remanei strain PB20... 160 1e-37
AE008692_1790(AE008692|pid:none) Zymomonas mobilis subsp. mobili... 160 1e-37
BX897699_1448(BX897699|pid:none) Bartonella henselae strain Hous... 160 1e-37
(Q704E8) RecName: Full=ATP-binding cassette sub-family B member ... 160 1e-37
CP000269_3554(CP000269|pid:none) Janthinobacterium sp. Marseille... 160 1e-37
CP000450_1610(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 160 1e-37
BA000045_4135(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 160 1e-37
CP000251_2609(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 160 1e-37
CP000009_103(CP000009|pid:none) Gluconobacter oxydans 621H, comp... 160 1e-37
BX908798_1333(BX908798|pid:none) Parachlamydia-related symbiont ... 159 1e-37
CP000544_1226(CP000544|pid:none) Halorhodospira halophila SL1, c... 159 1e-37
CU468135_2139(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 159 1e-37
DQ257435_2(DQ257435|pid:none) Uncultured organism HF10_3D09, com... 159 1e-37
AP008231_1422(AP008231|pid:none) Synechococcus elongatus PCC 630... 159 1e-37
CU234118_6215(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 159 1e-37
(Q07QX6) RecName: Full=Beta-(1-- &2)glucan export ATP- &CP000463... 159 1e-37
BX548175_1416(BX548175|pid:none) Prochlorococcus marinus MIT9313... 159 1e-37
(Q13BH6) RecName: Full=Beta-(1-- &2)glucan export ATP- &CP000283... 159 1e-37
CP001175_1766(CP001175|pid:none) Listeria monocytogenes HCC23, c... 159 1e-37
CP001110_979(CP001110|pid:none) Pelodictyon phaeoclathratiforme ... 159 2e-37
AY892381_1(AY892381|pid:none) Synthetic construct Homo sapiens c... 159 2e-37
CP000408_2035(CP000408|pid:none) Streptococcus suis 98HAH33, com... 159 2e-37
(O75027) RecName: Full=ATP-binding cassette sub-family B member ... 159 2e-37
CP000490_185(CP000490|pid:none) Paracoccus denitrificans PD1222 ... 159 2e-37
AK001418_1(AK001418|pid:none) Homo sapiens cDNA FLJ10556 fis, cl... 159 2e-37
AJ009799_1(AJ009799|pid:none) Gallus gallus mRNA for ABC transpo... 159 2e-37
AP009484_1599(AP009484|pid:none) Macrococcus caseolyticus JCSC54... 159 2e-37
CP000083_269(CP000083|pid:none) Colwellia psychrerythraea 34H, c... 159 2e-37
AB005289_1(AB005289|pid:none) Homo sapiens mRNA for ABC transpor... 159 2e-37
EU016568_18(EU016568|pid:none) Uncultured marine microorganism H... 159 2e-37
AF078777_1(AF078777|pid:none) Homo sapiens ABC transporter (ATM1... 159 2e-37
CP000524_159(CP000524|pid:none) Bartonella bacilliformis KC583, ... 159 2e-37
EU480938_1(EU480938|pid:none) Caenorhabditis remanei strain PB24... 159 2e-37
(B2GUP8) RecName: Full=ATP-binding cassette sub-family B member ... 159 2e-37
CP000407_2028(CP000407|pid:none) Streptococcus suis 05ZYH33, com... 159 2e-37
AP009049_730(AP009049|pid:none) Clostridium kluyveri NBRC 12016 ... 159 2e-37
AF386507_2(AF386507|pid:none) Streptomyces lavendulae complestat... 159 2e-37
CP000450_2378(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 159 2e-37
CP001349_4375(CP001349|pid:none) Methylobacterium nodulans ORS 2... 159 3e-37
CP001091_839(CP001091|pid:none) Actinobacillus pleuropneumoniae ... 159 3e-37
CP001191_1987(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 159 3e-37
EF093796_1(EF093796|pid:none) Lepeophtheirus salmonis P-glycopro... 159 3e-37
AC141435_11(AC141435|pid:none) Medicago truncatula clone mth2-21... 159 3e-37
CP001337_1041(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 159 3e-37
CP000474_990(CP000474|pid:none) Arthrobacter aurescens TC1, comp... 159 3e-37
CP000850_3165(CP000850|pid:none) Salinispora arenicola CNS-205, ... 159 3e-37
AE017226_422(AE017226|pid:none) Treponema denticola ATCC 35405, ... 159 3e-37
CP001089_761(CP001089|pid:none) Geobacter lovleyi SZ, complete g... 159 3e-37
BX572605_283(BX572605|pid:none) Rhodopseudomonas palustris CGA00... 159 3e-37
EU480941_1(EU480941|pid:none) Caenorhabditis remanei strain PB27... 159 3e-37
BX004814_1(BX004814|pid:none) Zebrafish DNA sequence from clone ... 159 3e-37
CP001281_3634(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 159 3e-37
AF083642_1(AF083642|pid:none) Onchocerca volvulus P-glycoprotein... 158 3e-37
BX842650_53(BX842650|pid:none) Bdellovibrio bacteriovorus comple... 158 3e-37
CP000449_588(CP000449|pid:none) Maricaulis maris MCS10, complete... 158 3e-37
CP000379_1290(CP000379|pid:none) Burkholderia cenocepacia AU 105... 158 3e-37
AY884214_1(AY884214|pid:none) Onchocerca volvulus P-glycoprotein... 158 3e-37
AP006840_2724(AP006840|pid:none) Symbiobacterium thermophilum IA... 158 3e-37
CP000360_1511(CP000360|pid:none) Acidobacteria bacterium Ellin34... 158 3e-37
CP001032_1512(CP001032|pid:none) Opitutus terrae PB90-1, complet... 158 3e-37
EU480929_1(EU480929|pid:none) Caenorhabditis remanei strain PB21... 158 3e-37
AL646052_1808(AL646052|pid:none) Ralstonia solanacearum GMI1000 ... 158 3e-37
(Q5KBN9) RecName: Full=Iron-sulfur clusters transporter ATM1, mi... 158 3e-37
CP000820_5465(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 158 3e-37
CP000806_2666(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 158 3e-37
EU371992_4(EU371992|pid:none) Paenibacillus polymyxa PmxA, PmxB,... 158 3e-37
CP000312_1053(CP000312|pid:none) Clostridium perfringens SM101, ... 158 4e-37
CP001391_483(CP001391|pid:none) Wolbachia sp. wRi, complete geno... 158 4e-37
CP000853_226(CP000853|pid:none) Alkaliphilus oremlandii OhILAs, ... 158 4e-37
CP001489_933(CP001489|pid:none) Brucella melitensis ATCC 23457 c... 158 4e-37
AL663052_1(AL663052|pid:none) Mouse DNA sequence from clone RP23... 158 4e-37
BA000043_1335(BA000043|pid:none) Geobacillus kaustophilus HTA426... 158 4e-37
AE014292_1007(AE014292|pid:none) Brucella suis 1330 chromosome I... 158 4e-37
AJ235270_204(AJ235270|pid:none) Rickettsia prowazekii strain Mad... 158 4e-37
EU480934_1(EU480934|pid:none) Caenorhabditis remanei strain PB24... 158 4e-37
CP000724_4485(CP000724|pid:none) Alkaliphilus metalliredigens QY... 158 4e-37
AE017224_916(AE017224|pid:none) Brucella abortus biovar 1 str. 9... 158 4e-37
CP000909_1668(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 158 4e-37
CP000569_768(CP000569|pid:none) Actinobacillus pleuropneumoniae ... 158 4e-37
AE017196_548(AE017196|pid:none) Wolbachia endosymbiont of Drosop... 158 4e-37
T21266(T21266) hypothetical protein F22E10.1 - Caenorhabditis el... 158 4e-37
BA000038_1612(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, ch... 158 4e-37
CP000912_964(CP000912|pid:none) Brucella suis ATCC 23445 chromos... 158 4e-37
CP000709_871(CP000709|pid:none) Brucella ovis ATCC 25840 chromos... 158 4e-37
CP001615_2403(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 158 4e-37
FP236842_2269(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 157 6e-37
CP001129_212(CP001129|pid:none) Streptococcus equi subsp. zooepi... 157 6e-37
(Q61102) RecName: Full=ATP-binding cassette sub-family B member ... 157 6e-37
(Q5RFQ9) RecName: Full=ATP-binding cassette sub-family B member ... 157 6e-37
AP006627_3958(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 157 6e-37
(P44407) RecName: Full=Lipid A export ATP-binding/permease prote... 157 6e-37
AP008230_3478(AP008230|pid:none) Desulfitobacterium hafniense Y5... 157 6e-37
FM204884_1765(FM204884|pid:none) Streptococcus equi subsp. zooep... 157 6e-37
AM236080_2693(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 157 6e-37
(Q1QH37) RecName: Full=Beta-(1-- &2)glucan export ATP- &CP000319... 157 6e-37
FM204883_278(FM204883|pid:none) Streptococcus equi subsp. equi 4... 157 6e-37
(Q14JW6) RecName: Full=Lipid A export ATP-binding/permease prote... 157 7e-37
AF004835_4(AF004835|pid:none) Brevibacillus brevis tyrocidine bi... 157 7e-37
BA000045_321(BA000045|pid:none) Gloeobacter violaceus PCC 7421 D... 157 7e-37
AP009384_2757(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 157 7e-37
EU480957_1(EU480957|pid:none) Caenorhabditis remanei strain PB27... 157 7e-37
CP001612_228(CP001612|pid:none) Rickettsia africae ESF-5, comple... 157 7e-37
AM747721_1210(AM747721|pid:none) Burkholderia cenocepacia J2315 ... 157 7e-37
AF466307_1(AF466307|pid:none) Dictyostelium discoideum ABC trans... 157 7e-37
CP000959_254(CP000959|pid:none) Burkholderia cenocepacia MC0-3 c... 157 7e-37
CP000750_4454(CP000750|pid:none) Kineococcus radiotolerans SRS30... 157 7e-37
CP001287_2296(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 157 7e-37
T21267(T21267)hypothetical protein F22E10.2 - Caenorhabditis ele... 157 7e-37
CP000766_313(CP000766|pid:none) Rickettsia rickettsii str. Iowa,... 157 7e-37
CP000608_151(CP000608|pid:none) Francisella tularensis subsp. tu... 157 7e-37

>CP000133_1396(CP000133|pid:none) Rhizobium etli CFN 42, complete
genome.
Length = 625

Score = 216 bits (551), Expect = 1e-54
Identities = 110/166 (66%), Positives = 135/166 (81%)
Frame = +1

Query: 589 SLRSIIGVVPQETVLFNDTVAYNIGFGNREANDDQLIDASRRAQILSFIESSPDGFRTVV 768
SLRS+IG+VPQ+TVLFNDTVAYNI +G A+DD++ A+ AQI FIE P+GF T V
Sbjct: 432 SLRSLIGMVPQDTVLFNDTVAYNIRYGRTSASDDEIYAAAEVAQIAHFIEMLPEGFETKV 491

Query: 769 GEXGLRLSGGEKQRVSIARALLKDPPILILDEASSSLDTFTERKIQQAINEVSKGRTTLV 948
GE GL+LSGGEKQRV+IAR +LK PPILILDEA+S+LDT TER+IQ A++ VSK RTTLV
Sbjct: 492 GERGLKLSGGEKQRVAIARTVLKAPPILILDEATSALDTTTEREIQTALDVVSKNRTTLV 551

Query: 949 IAHRLSXIIHCDEILVLKGGHIVERGSHSYLLDFNGDYAHLWNQQQ 1086
IAHRLS +I DEI+VLK G I ERG+H+ LL+ NG YA +WN+Q+
Sbjct: 552 IAHRLSTVIGADEIIVLKSGEIAERGTHAALLERNGLYASMWNRQR 597

Score = 60.5 bits (145), Expect = 1e-07
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Frame = +2

Query: 260 SLLPYYWK--KNPFKFRIILCVSIIFFSKLINLSVPLIFKNIINTLPEKVEWH------- 412
+L PY W + K R+I + SK + L VP FK + L +++
Sbjct: 18 NLWPYMWPAGRTDLKMRVIWASVFLLVSKFVLLLVPYFFKWSTDALNGRMDLAGAVPPLL 77

Query: 413 -----LLILYGVLFLIQKSIWDIRDLLFQDVNDSATKQINLETFDHLHRLSLSYHLNKR 574
L+I Y V LIQ + +RD LF V A +Q+ +TF H+H LSL +HL ++
Sbjct: 78 AGAIALVIAYNVTRLIQLGLNQLRDALFASVGQHAVRQLAYKTFVHMHELSLRFHLERK 136

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,897,049,050
Number of extensions: 37196774
Number of successful extensions: 144810
Number of sequences better than 10.0: 30756
Number of HSP's gapped: 140664
Number of HSP's successfully gapped: 34707
Length of query: 410
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 279
Effective length of database: 627,191,635
Effective search space: 174986466165
Effective search space used: 174986466165
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.68 gvh: 0.45 alm: 0.27 top: 0.40 tms: 0.07 mit: 0.33 mip: 0.04
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.05 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 1.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

24.0 %: mitochondrial
24.0 %: endoplasmic reticulum
20.0 %: cytoplasmic
16.0 %: nuclear
8.0 %: Golgi
4.0 %: plasma membrane
4.0 %: vesicles of secretory system

>> prediction for Contig-U11992-1 is mit

VS (DIR, S) 0
VH (FL, L) 1
VF (FL, S) 0
AH (FL, L) 1
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0