Contig-U11954-1
Contig ID Contig-U11954-1
Contig update 2002.12.18
Contig sequence
>Contig-U11954-1 (Contig-U11954-1Q) /CSM_Contig/Contig-U11954-1Q.Seq.d
GTACAAGCTTTTTTTTTTTTTTTTTTTTTTTTTATTTTAAAANCAATTAA
AAATTATTTNTTNAATTAATTAAATAAACTTTTTTTTTTTNGNNTTTTTT
GTTNATGTTNANGTTTTTTTTTTTTTNTAAAAAAAANNNNNNNNN-----
-----TAAGTTGTGTTGAAACTTTACTTTACTTTACTCGTCTAAAAGGTG
TCCCACCAGAAAGAGAAATTCAATCAGTTGAAAGTATTCTTAAAGAAGTT
AACCTCTTTGAAGTTAAAGAAAGATTAGTTAAAGAATTAAGTGGTGGTAT
GAAAAGAAGATTATCATTTGCTGTTGCAATGACTGGTGATTCTTCAATTA
TTTTCCTTGATGAACCAAGCACAGGTATTTCTTCTGAATTGAGAAGGGAT
TTATGGCGTACAATTAATGACTTAAAAAAGAATAGATCAATTATTTTAAC
AACACATTCAATGGAAGAAGCTGATGTTTTATCAAGTCGTATTGCAATTA
TTTCACAAGGTAAATTACAATGTATTGGTACACAAAATCATTTGAAAGCT
AAATTTGGTGATGGTTATTCAGTTAGAATTAATGTTGAAGAACCATATAT
TAATACTCATAATCCAACAGAATTAATTACAAAATTCTCACCACAAGCAG
TTCTTACCGAATCATTTGATGGTAGTTATAATTATCGTTTCCCAAAGAAT
ACAGTTATTTCTGACTTGTATCAATATTTGGTTTCTCATAAATATGATCA
TCATTTACAAGAATGGAGTTTTAGTCAAACAAGTTTAGAAGATGTTTTCC
TTAAAATTTCTGCAAATGATGATACAATTAATTAATAAAAAAAAAAAAAC
ATAAACATAAACAAAAAAAAACAAAAAAAAAAAAGTTAATTAAATTAATT
AAATAAATAATTTTAAATTGTATTAAAAATAAAAAAAAAAAAAAAAAAAA
AAAAAGTT

Gap gap included
Contig length 948
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 1080639
End point 1079776
Strand (PLUS/MINUS) MINUS
Number of clones 4
Number of EST 4
Link to clone list U11954
List of clone(s)

est1=FC-IC1237F,1,136
est2=VHJ168Z,137,655
est3=VSC891Z,416,916
est4=FC-IC1237Z,511,944
Translated Amino Acid sequence
vqaffffffffilkxiknyxxn*LNKLFFFXXFCXCXXFFFFXKKXXX---

---SCVETLLYFTRLKGVPPEREIQSVESILKEVNLFEVKERLVKELSGGMKRRLSFAVA
MTGDSSIIFLDEPSTGISSELRRDLWRTINDLKKNRSIILTTHSMEEADVLSSRIAIISQ
GKLQCIGTQNHLKAKFGDGYSVRINVEEPYINTHNPTELITKFSPQAVLTESFDGSYNYR
FPKNTVISDLYQYLVSHKYDHHLQEWSFSQTSLEDVFLKISANDDTIN**kkknininkk
kqkkks*ln*lnk*f*ivlkikkkkkkkkv


Translated Amino Acid sequence (All Frames)
Frame A:
vqaffffffffilkxiknyxxn*LNKLFFFXXFCXCXXFFFFXKKXXX---

---*vvlklyftllv*kvshqkekfnqlkvflkkltslklkkd*lkn*vvv*kedyhlll
q*lvilqlfslmnqaqvflln*egiygvqlmt*kridqlf*qhiqwkklmfyqvvlqlfh
kvnynvlvhkii*klnlvmviqlelmlknhililiiqqn*lqnshhkqflpnhlmvviii
vsqriqlfltciniwflinmiiiykngvlvkqv*kmfslkflqmmiqlinkkkkt*t*tk
knkkkkvn*in*innfkly*k*kkkkkkkk

Frame B:
yklffffffflf*xqlkiixxin*infffxxffvxvxvfffx*kkxxx---

---klc*nftllysskrcptrkrnsis*kys*rs*pl*s*rkis*rikwwyekkiiiccc
ndw*ffnyfp**tkhryff*iekgfmayn**lkke*inyfnntfngrs*cfiksycnyft
r*itmywytksfes*iw*wlfs*n*c*rtiy*ys*snrinykilttsssyrii*w*l*ls
fpkeysyf*lvsifgfs*i*ssftrmef*snkfrrcfp*nfck**yn*likkkkhkhkqk
ktkkkkliklik*iilnciknkkkkkkkks

Frame C:
tsffffffffyfkxn*klfxxlik*tfffxxflxmxxffffxkkxxx---

---SCVETLLYFTRLKGVPPEREIQSVESILKEVNLFEVKERLVKELSGGMKRRLSFAVA
MTGDSSIIFLDEPSTGISSELRRDLWRTINDLKKNRSIILTTHSMEEADVLSSRIAIISQ
GKLQCIGTQNHLKAKFGDGYSVRINVEEPYINTHNPTELITKFSPQAVLTESFDGSYNYR
FPKNTVISDLYQYLVSHKYDHHLQEWSFSQTSLEDVFLKISANDDTIN**kkknininkk
kqkkks*ln*lnk*f*ivlkikkkkkkkkv

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11954-1 (Contig-U11954-1Q)
/CSM_Contig/Contig-U11954-1Q.Seq.d
(958 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11954-1 (Contig-U11954-1Q) /CSM_Contig/Conti... 1350 0.0
Contig-U13902-1 (Contig-U13902-1Q) /CSM_Contig/Conti... 46 7e-05
Contig-U14578-1 (Contig-U14578-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U12757-1 (Contig-U12757-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U10938-1 (Contig-U10938-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U14443-1 (Contig-U14443-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U14350-1 (Contig-U14350-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U14306-1 (Contig-U14306-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U11898-1 (Contig-U11898-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U11251-1 (Contig-U11251-1Q) /CSM_Contig/Conti... 40 0.004

>Contig-U11954-1 (Contig-U11954-1Q) /CSM_Contig/Contig-U11954-1Q.Seq.d
Length = 958

Score = 1350 bits (681), Expect = 0.0
Identities = 681/681 (100%)
Strand = Plus / Plus


Query: 156 taagttgtgttgaaactttactttactttactcgtctaaaaggtgtcccaccagaaagag 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 taagttgtgttgaaactttactttactttactcgtctaaaaggtgtcccaccagaaagag 215


Query: 216 aaattcaatcagttgaaagtattcttaaagaagttaacctctttgaagttaaagaaagat 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 aaattcaatcagttgaaagtattcttaaagaagttaacctctttgaagttaaagaaagat 275


Query: 276 tagttaaagaattaagtggtggtatgaaaagaagattatcatttgctgttgcaatgactg 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tagttaaagaattaagtggtggtatgaaaagaagattatcatttgctgttgcaatgactg 335


Query: 336 gtgattcttcaattattttccttgatgaaccaagcacaggtatttcttctgaattgagaa 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gtgattcttcaattattttccttgatgaaccaagcacaggtatttcttctgaattgagaa 395


Query: 396 gggatttatggcgtacaattaatgacttaaaaaagaatagatcaattattttaacaacac 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gggatttatggcgtacaattaatgacttaaaaaagaatagatcaattattttaacaacac 455


Query: 456 attcaatggaagaagctgatgttttatcaagtcgtattgcaattatttcacaaggtaaat 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 attcaatggaagaagctgatgttttatcaagtcgtattgcaattatttcacaaggtaaat 515


Query: 516 tacaatgtattggtacacaaaatcatttgaaagctaaatttggtgatggttattcagtta 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tacaatgtattggtacacaaaatcatttgaaagctaaatttggtgatggttattcagtta 575


Query: 576 gaattaatgttgaagaaccatatattaatactcataatccaacagaattaattacaaaat 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gaattaatgttgaagaaccatatattaatactcataatccaacagaattaattacaaaat 635


Query: 636 tctcaccacaagcagttcttaccgaatcatttgatggtagttataattatcgtttcccaa 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tctcaccacaagcagttcttaccgaatcatttgatggtagttataattatcgtttcccaa 695


Query: 696 agaatacagttatttctgacttgtatcaatatttggtttctcataaatatgatcatcatt 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 agaatacagttatttctgacttgtatcaatatttggtttctcataaatatgatcatcatt 755


Query: 756 tacaagaatggagttttagtcaaacaagtttagaagatgttttccttaaaatttctgcaa 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 tacaagaatggagttttagtcaaacaagtttagaagatgttttccttaaaatttctgcaa 815


Query: 816 atgatgatacaattaattaat 836
|||||||||||||||||||||
Sbjct: 816 atgatgatacaattaattaat 836


Score = 79.8 bits (40), Expect = 5e-15
Identities = 40/40 (100%)
Strand = Plus / Plus


Query: 885 gttaattaaattaattaaataaataattttaaattgtatt 924
||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 gttaattaaattaattaaataaataattttaaattgtatt 924


Score = 73.8 bits (37), Expect = 3e-13
Identities = 46/46 (100%)
Strand = Plus / Plus


Query: 34 attttaaaancaattaaaaattatttnttnaattaattaaataaac 79
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 attttaaaancaattaaaaattatttnttnaattaattaaataaac 79


Score = 36.2 bits (18), Expect = 0.068
Identities = 25/28 (89%)
Strand = Plus / Minus


Query: 893 aattaattaaataaataattttaaattg 920
|||||||| || |||||||||| |||||
Sbjct: 71 aattaattnaanaaataatttttaattg 44


Score = 30.2 bits (15), Expect = 4.2
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 893 aattaattaaataaa 907
|||||||||||||||
Sbjct: 64 aattaattaaataaa 78


Score = 30.2 bits (15), Expect = 4.2
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 64 aattaattaaataaa 78
|||||||||||||||
Sbjct: 893 aattaattaaataaa 907


>Contig-U13902-1 (Contig-U13902-1Q) /CSM_Contig/Contig-U13902-1Q.Seq.d
Length = 2177

Score = 46.1 bits (23), Expect = 7e-05
Identities = 26/27 (96%)
Strand = Plus / Plus


Query: 886 ttaattaaattaattaaataaataatt 912
|||||||||| ||||||||||||||||
Sbjct: 2090 ttaattaaataaattaaataaataatt 2116


Score = 32.2 bits (16), Expect = 1.1
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 893 aattaattaaataaat 908
||||||||||||||||
Sbjct: 2088 aattaattaaataaat 2103


Score = 30.2 bits (15), Expect = 4.2
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 64 aattaattaaataaa 78
|||||||||||||||
Sbjct: 2088 aattaattaaataaa 2102


Score = 30.2 bits (15), Expect = 4.2
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 892 aaattaattaaataaataa 910
||||||||||| |||||||
Sbjct: 2083 aaattaattaattaaataa 2101


>Contig-U14578-1 (Contig-U14578-1Q) /CSM_Contig/Contig-U14578-1Q.Seq.d
Length = 395

Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus


Query: 893 aattaattaaataaataattttaaa 917
|||||||||||||| ||||||||||
Sbjct: 74 aattaattaaataattaattttaaa 98


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 17,907
Number of Sequences: 6905
Number of extensions: 17907
Number of successful extensions: 2108
Number of sequences better than 10.0: 324
length of query: 958
length of database: 5,674,871
effective HSP length: 16
effective length of query: 942
effective length of database: 5,564,391
effective search space: 5241656322
effective search space used: 5241656322
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.27
Homology vs DNA
Query= Contig-U11954-1 (Contig-U11954-1Q) /CSM_Contig/Contig-U11954-1Q.Seq.d
(958 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ442344) Dictyostelium discoideum cDNA clone:ddv49g17, 3' ... 1029 0.0 1
(AF465311) Dictyostelium discoideum ABC transporter ABCA.9 (... 747 0.0 3
(AU262866) Dictyostelium discoideum vegetative cDNA clone:VS... 789 0.0 1
(AU272311) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 601 e-167 1
(AF465309) Dictyostelium discoideum ABC transporter ABCA.7 (... 137 2e-97 6
(BJ409405) Dictyostelium discoideum cDNA clone:dds41f16, 3' ... 82 8e-59 5
(AU272310) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 74 1e-08 1
(AZ670468) ENTKR59TF Entamoeba histolytica Sheared DNA Entam... 48 1e-08 3
(BH149783) ENTQE71TR Entamoeba histolytica Sheared DNA Entam... 48 1e-08 3
(AZ668512) ENTJF31TF Entamoeba histolytica Sheared DNA Entam... 48 1e-08 3
(EL359450) CCEM4248.b1_O05.ab1 CCE(LMS) endive Cichorium end... 66 3e-06 1
(AF465308) Dictyostelium discoideum ABC transporter ABCA.6 (... 64 1e-05 1
(EV827169) TT1EP06TH Tetrahymena thermophila SB210 cDNA libr... 62 4e-05 1
(AF465304) Dictyostelium discoideum ABC transporter ABCA.2 (... 48 1e-04 3
(AM770414) Zostera marina EST, 5'-end sequence, meristematic... 38 2e-04 3
(EL388889) CFFM26160.b1_O11.ab1 CFF(LMS) safflower Carthamus... 58 6e-04 1
(DV682621) CGN-22591 Seed of Middle Development Stage Coffea... 56 0.003 1
(AU285449) Zinnia elegans cDNA, clone:Z394, primer:M13 forwa... 56 0.003 1
(FF564304) TT1BA68TH Tetrahymena thermophila SB210 cDNA libr... 50 0.003 2
(EG963526) AU_Ich_020D_G07 Whole organism normalized cDNA li... 54 0.010 1
(DY683805) TTEAP09THB Tetrahymena thermophila EST library, c... 54 0.010 1
(DV556395) DC05033G05 Panax ginseng cDNA library Panax ginse... 54 0.010 1
(CX592008) TTE00018015 Amplicon Express - Conjugative Form T... 54 0.010 1
(CJ771622) Ipomoea nil cDNA clone:jmsf43f10, 3' end. 54 0.010 1
(CJ757116) Ipomoea nil cDNA clone:jmsf14f12, 3' end. 54 0.010 1
(CJ757015) Ipomoea nil cDNA clone:jmsf14a16, 3' end. 54 0.010 1
(BJ558572) Ipomoea nil cDNA clone:jm26a07, 5' end, single read. 54 0.010 1
(EJ897049) 1093018472386 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.010 2
(EJ780640) 1093017248510 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.011 2
(AZ674894) ENTMI88TF Entamoeba histolytica Sheared DNA Entam... 48 0.011 2
(EJ277687) 1095366032758 Global-Ocean-Sampling_GS-27-01-01-1... 50 0.011 2
(EJ375046) 1092963738211 Global-Ocean-Sampling_GS-28-01-01-1... 50 0.011 2
(ER621371) 1093017417382 Global-Ocean-Sampling_GS-36-01-01-2... 36 0.021 3
(AZ546658) ENTED21TRB Entamoeba histolytica Sheared DNA Enta... 44 0.025 3
(CO498221) G.h.fbr-sw07611 G.h.fbr-sw Gossypium hirsutum cDN... 50 0.037 2
(AF465310) Dictyostelium discoideum ABC transporter ABCA.8 (... 52 0.039 1
(AC219218) Solanum lycopersicum chromosome 6 clone C06SLe008... 52 0.039 1
(AC219215) Solanum lycopersicum chromosome 6 clone C06HBa018... 52 0.039 1
(FH978287) CHO_OF6823xh18r1.ab1 CHO_OF6 Nicotiana tabacum ge... 52 0.039 1
(BJ407967) Dictyostelium discoideum cDNA clone:dds44b07, 3' ... 52 0.039 1
(BG140588) EST481030 wild tomato pollen Solanum pennellii cD... 52 0.039 1
(BG139457) EST479899 wild tomato pollen Solanum pennellii cD... 52 0.039 1
(FC368177) CAYY5714.fwd CAYY Physcomitrella patens subsp. pa... 44 0.13 2
(FC391044) CAYZ18330.fwd CAYZ Physcomitrella patens subsp. p... 44 0.13 2
(FC337995) CAYY1769.fwd CAYY Physcomitrella patens subsp. pa... 44 0.13 2
(FC327845) CAYY1135.fwd CAYY Physcomitrella patens subsp. pa... 44 0.14 2
(FC351839) CAYY27291.fwd CAYY Physcomitrella patens subsp. p... 44 0.14 2
(FC353254) CAYY28153.fwd CAYY Physcomitrella patens subsp. p... 44 0.14 2
(FC437352) CBAX1179.fwd CBAX Physcomitrella patens subsp. pa... 44 0.14 2
(FC358853) CAYY31498.fwd CAYY Physcomitrella patens subsp. p... 44 0.14 2
(FC353212) CAYY2813.fwd CAYY Physcomitrella patens subsp. pa... 44 0.14 2
(FC355591) CAYY29506.fwd CAYY Physcomitrella patens subsp. p... 44 0.14 2
(FC371214) CAYY7418.fwd CAYY Physcomitrella patens subsp. pa... 44 0.14 2
(FC393723) CAYZ19762.fwd CAYZ Physcomitrella patens subsp. p... 44 0.14 2
(FC370760) CAYY7158.fwd CAYY Physcomitrella patens subsp. pa... 44 0.14 2
(FC364042) CAYY35133.fwd CAYY Physcomitrella patens subsp. p... 44 0.14 2
(FC351956) CAYY27354.fwd CAYY Physcomitrella patens subsp. p... 44 0.14 2
(FC340014) CAYY20096.fwd CAYY Physcomitrella patens subsp. p... 44 0.14 2
(FC371022) CAYY7304.fwd CAYY Physcomitrella patens subsp. pa... 44 0.15 2
(FC350387) CAYY26406.fwd CAYY Physcomitrella patens subsp. p... 44 0.15 2
(BT005456) Arabidopsis thaliana clone U20889 putative ABC tr... 50 0.16 1
(BT004197) Arabidopsis thaliana clone RAFL16-03-E07 (R20889)... 50 0.16 1
(AL049746) Arabidopsis thaliana DNA chromosome 3, BAC clone ... 50 0.16 1
(AX651944) Sequence 825 from Patent WO03000898. 50 0.16 1
(ES817796) UFL_310_55 Cotton fiber 0-10 day post anthesis Go... 50 0.16 1
(EL397634) CFFM8929.b1_B01.ab1 CFF(LMS) safflower Carthamus ... 50 0.16 1
(EH766308) CNSM12619.b1_F12.ab1 CNS(LMS) yellow starthistle ... 50 0.16 1
(AV553362) Arabidopsis thaliana cDNA clone:RZ60g05R, 5' end. 50 0.16 1
(EV840195) TT1EE84TH Tetrahymena thermophila SB210 cDNA libr... 50 0.16 1
(EJ053075) 1095456010371 Global-Ocean-Sampling_GS-26-01-01-1... 42 0.30 3
(BE029790) kp34h02.y1 TBN95TM-SSFH Strongyloides stercoralis... 40 0.34 2
(ER307573) 1092343765802 Global-Ocean-Sampling_GS-34-01-01-1... 42 0.35 3
(BH208265) Sm1-59N18.TR Sm1 Schistosoma mansoni genomic clon... 38 0.45 2
(ER528101) 1093015724589 Global-Ocean-Sampling_GS-35-01-01-1... 38 0.57 2
(FH695601) CHO_OF5128xl19r1.ab1 CHO_OF5 Nicotiana tabacum ge... 48 0.62 1
(FH113207) CHO_OF3040xj04f1.ab1 CHO_OF3 Nicotiana tabacum ge... 48 0.62 1
(FH113088) CHO_OF3040xj03f1.ab1 CHO_OF3 Nicotiana tabacum ge... 48 0.62 1
(ET765952) CHO_OF863xe02r1.ab1 CHO_OF Nicotiana tabacum geno... 48 0.62 1
(DV144727) CV03137A2F05.f1 CV03-normalized library Euphorbia... 48 0.62 1
(BM064871) KS01072C08 KS01 Capsicum annuum cDNA, mRNA sequence. 48 0.62 1
(AW038363) EST280046 tomato mixed elicitor, BTI Solanum lyco... 48 0.62 1
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 34 1.7 15
(EJ751792) 1092963040865 Global-Ocean-Sampling_GS-30-02-01-1... 44 1.9 2
(EJ729061) 1092960016121 Global-Ocean-Sampling_GS-30-02-01-1... 42 1.9 2
(EJ781596) 1093017258890 Global-Ocean-Sampling_GS-30-02-01-1... 40 2.0 2
(EJ810496) 1093017486412 Global-Ocean-Sampling_GS-30-02-01-1... 40 2.1 2
(BH136772) ENTOM03TF Entamoeba histolytica Sheared DNA Entam... 40 2.1 2
(EJ376363) 1092963743827 Global-Ocean-Sampling_GS-28-01-01-1... 42 2.3 2
(EJ718714) 1092959438308 Global-Ocean-Sampling_GS-30-02-01-1... 42 2.3 2
(EJ427535) 1093015235435 Global-Ocean-Sampling_GS-28-01-01-1... 42 2.3 2
(AY099665) Arabidopsis thaliana ABC-type transport protein-l... 46 2.4 1
(AM465676) Vitis vinifera contig VV78X130429.17, whole genom... 46 2.4 1
(AC097538) Rattus norvegicus clone CH230-9D15, WORKING DRAFT... 46 2.4 1
(CU041220) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.4 1
(FH981873) CHO_OF6830xk18f1.ab1 CHO_OF6 Nicotiana tabacum ge... 46 2.4 1
(FH590529) CHO_OF4908xh17r1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 2.4 1
(FH566834) CHO_OF4877xf11f1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 2.4 1
(FH263647) CHO_OF4131xa14r1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 2.4 1
(FH236540) CHO_OF3432xb13r1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 2.4 1
(ET991516) CHO_OF770xk05r1.ab1 CHO_OF Nicotiana tabacum geno... 46 2.4 1

>(BJ442344) Dictyostelium discoideum cDNA clone:ddv49g17, 3' end,
single read.
Length = 519

Score = 1029 bits (519), Expect = 0.0
Identities = 519/519 (100%)
Strand = Plus / Minus


Query: 156 taagttgtgttgaaactttactttactttactcgtctaaaaggtgtcccaccagaaagag 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 taagttgtgttgaaactttactttactttactcgtctaaaaggtgtcccaccagaaagag 460


Query: 216 aaattcaatcagttgaaagtattcttaaagaagttaacctctttgaagttaaagaaagat 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aaattcaatcagttgaaagtattcttaaagaagttaacctctttgaagttaaagaaagat 400


Query: 276 tagttaaagaattaagtggtggtatgaaaagaagattatcatttgctgttgcaatgactg 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tagttaaagaattaagtggtggtatgaaaagaagattatcatttgctgttgcaatgactg 340


Query: 336 gtgattcttcaattattttccttgatgaaccaagcacaggtatttcttctgaattgagaa 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gtgattcttcaattattttccttgatgaaccaagcacaggtatttcttctgaattgagaa 280


Query: 396 gggatttatggcgtacaattaatgacttaaaaaagaatagatcaattattttaacaacac 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gggatttatggcgtacaattaatgacttaaaaaagaatagatcaattattttaacaacac 220


Query: 456 attcaatggaagaagctgatgttttatcaagtcgtattgcaattatttcacaaggtaaat 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 attcaatggaagaagctgatgttttatcaagtcgtattgcaattatttcacaaggtaaat 160


Query: 516 tacaatgtattggtacacaaaatcatttgaaagctaaatttggtgatggttattcagtta 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 tacaatgtattggtacacaaaatcatttgaaagctaaatttggtgatggttattcagtta 100


Query: 576 gaattaatgttgaagaaccatatattaatactcataatccaacagaattaattacaaaat 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 gaattaatgttgaagaaccatatattaatactcataatccaacagaattaattacaaaat 40


Query: 636 tctcaccacaagcagttcttaccgaatcatttgatggta 674
|||||||||||||||||||||||||||||||||||||||
Sbjct: 39 tctcaccacaagcagttcttaccgaatcatttgatggta 1

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 984,111,745
Number of extensions: 59495566
Number of successful extensions: 4497012
Number of sequences better than 10.0: 272
Length of query: 958
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 934
Effective length of database: 97,308,875,965
Effective search space: 90886490151310
Effective search space used: 90886490151310
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 1
Homology vs Protein
Query= Contig-U11954-1 (Contig-U11954-1Q) /CSM_Contig/Contig-U11954-1Q.Seq.d
(958 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54DT1) RecName: Full=ABC transporter A family member 9; AltNam... 443 e-123
AF465311_1(AF465311|pid:none) Dictyostelium discoideum ABC trans... 443 e-123
(Q8T6J0) RecName: Full=ABC transporter A family member 7; AltNam... 344 2e-93
AP003977_23(AP003977|pid:none) Oryza sativa Japonica Group genom... 158 3e-37
AP008208_692(AP008208|pid:none) Oryza sativa (japonica cultivar-... 158 3e-37
AP003904_1(AP003904|pid:none) Oryza sativa Japonica Group genomi... 156 1e-36
AP008214_993(AP008214|pid:none) Oryza sativa (japonica cultivar-... 156 1e-36
AM502229_126(AM502229|pid:none) Leishmania infantum chromosome 11. 155 2e-36
AF230978_1(AF230978|pid:none) Trypanosoma cruzi ABCA1 transporte... 154 4e-36
(Q9STT5) RecName: Full=Probable ABC2 homolog 6; 152 1e-35
AL049746_11(AL049746|pid:none) Arabidopsis thaliana DNA chromoso... 152 1e-35
AK065426_1(AK065426|pid:none) Oryza sativa Japonica Group cDNA c... 150 5e-35
CT005250_126(CT005250|pid:none) Leishmania major strain Friedlin... 150 8e-35
AM494948_102(AM494948|pid:none) Leishmania braziliensis chromoso... 150 8e-35
(Q9STT6) RecName: Full=Putative ABC2 homolog 5; &AL049746_10(AL... 149 1e-34
(Q1PEH6) RecName: Full=ABC2 homolog 2; 149 2e-34
AC146548_19(AC146548|pid:none) Medicago truncatula clone mth2-2p... 147 5e-34
AC146548_25(AC146548|pid:none) Medicago truncatula clone mth2-2p... 147 5e-34
(Q9FLT8) RecName: Full=Putative ABC2 homolog 16; &AB010069_1(AB... 147 5e-34
AC146548_21(AC146548|pid:none) Medicago truncatula clone mth2-2p... 146 1e-33
(Q9FLT4) RecName: Full=ABC2 homolog 14; &AB010069_5(AB010069|pi... 146 1e-33
BC043937_1(BC043937|pid:none) Mus musculus ATP-binding cassette,... 145 2e-33
(Q8T5Z7) RecName: Full=ABC transporter A family member 1; AltNam... 144 3e-33
BT070844_1(BT070844|pid:none) Picea sitchensis clone WS02756_K03... 144 3e-33
AY243471_1(AY243471|pid:none) Mus musculus ATP-binding cassette ... 144 3e-33
CP000078_31(CP000078|pid:none) Leishmania major strain Friedlin ... 143 1e-32
BC142602_1(BC142602|pid:none) Danio rerio zgc:163009, mRNA (cDNA... 142 1e-32
AK101910_1(AK101910|pid:none) Oryza sativa Japonica Group cDNA c... 142 2e-32
AY208182_1(AY208182|pid:none) Rattus norvegicus ATP-binding cass... 142 2e-32
CP000079_98(CP000079|pid:none) Leishmania major strain Friedlin ... 142 2e-32
AF287263_1(AF287263|pid:none) Mus musculus ATP-binding cassette ... 141 3e-32
AB384391_1(AB384391|pid:none) Synthetic construct DNA, clone: pF... 141 4e-32
(Q99758) RecName: Full=ATP-binding cassette sub-family A member ... 141 4e-32
A59188(A59188) ATP-binding cassette transporter ABC3 - human &U... 141 4e-32
AF362377_1(AF362377|pid:none) Gallus gallus ATP-binding cassette... 140 5e-32
AM502245_55(AM502245|pid:none) Leishmania infantum chromosome 27. 140 6e-32
AY033486_1(AY033486|pid:none) Homo sapiens ATP-binding cassette ... 140 8e-32
(Q86UK0) RecName: Full=ATP-binding cassette sub-family A member ... 140 8e-32
AK123578_1(AK123578|pid:none) Homo sapiens cDNA FLJ41584 fis, cl... 140 8e-32
BC156327_1(BC156327|pid:none) Synthetic construct Homo sapiens c... 140 8e-32
AM494939_35(AM494939|pid:none) Leishmania braziliensis chromosom... 140 8e-32
AF418105_1(AF418105|pid:none) Homo sapiens ATP-binding cassette ... 140 8e-32
AY219711_1(AY219711|pid:none) Homo sapiens ABCA12 transporter su... 140 8e-32
AY243470_1(AY243470|pid:none) Mus musculus ATP-binding cassette ... 139 1e-31
U90126_1(U90126|pid:none) Bos taurus ABC transporter mRNA, compl... 139 1e-31
AY028897_1(AY028897|pid:none) Homo sapiens ATP-binding cassette ... 139 1e-31
AY427777_1(AY427777|pid:none) Canis familiaris isolate AS22 ABCA... 139 1e-31
AK292592_1(AK292592|pid:none) Homo sapiens cDNA FLJ77193 partial... 139 1e-31
AY427778_1(AY427778|pid:none) Canis familiaris isolate AS23 ABCA... 139 1e-31
U01058_1(U01058|pid:none) Entamoeba histolytica HM-1:IHSS ABC-fa... 139 1e-31
BC158063_1(BC158063|pid:none) Mus musculus ATP-binding cassette,... 139 1e-31
DQ059505_1(DQ059505|pid:none) Bos taurus ATP-binding cassette su... 139 1e-31
CT005250_128(CT005250|pid:none) Leishmania major strain Friedlin... 139 1e-31
BC042663_1(BC042663|pid:none) Mus musculus ATP-binding cassette,... 139 1e-31
(P41233) RecName: Full=ATP-binding cassette sub-family A member ... 138 2e-31
AK129274_1(AK129274|pid:none) Mus musculus mRNA for mKIAA1062 pr... 138 2e-31
AM502229_128(AM502229|pid:none) Leishmania infantum chromosome 11. 138 2e-31
A54774(A54774) ATP binding cassette transporter ABC1 - mouse &X... 138 2e-31
(P41234) RecName: Full=ATP-binding cassette sub-family A member ... 138 2e-31
X75927_1(X75927|pid:none) Mus musculus mRNA for ABC transporter ... 138 2e-31
(Q9FLT5) RecName: Full=ABC2 homolog 11; &AB010069_4(AB010069|pi... 138 2e-31
AL732557_15(AL732557|pid:none) Mouse DNA sequence from clone RP2... 138 2e-31
U88667_1(U88667|pid:none) Human ATP binding cassette transporter... 138 3e-31
AK304286_1(AK304286|pid:none) Homo sapiens cDNA FLJ50363 complet... 138 3e-31
BC130280_1(BC130280|pid:none) Homo sapiens ATP-binding cassette,... 138 3e-31
AB445477_1(AB445477|pid:none) Homo sapiens ABCA1 mRNA for ATP-bi... 137 4e-31
(Q8K448) RecName: Full=ATP-binding cassette sub-family A member ... 137 4e-31
AB112584_1(AB112584|pid:none) Mus musculus mRNA for ATP-binding ... 137 4e-31
AF285167_1(AF285167|pid:none) Homo sapiens ATP-binding cassette ... 137 4e-31
BC146856_1(BC146856|pid:none) Homo sapiens ATP-binding cassette,... 137 4e-31
AB055982_1(AB055982|pid:none) Homo sapiens mRNA for ABCA1, compl... 137 4e-31
(Q9ESR9) RecName: Full=ATP-binding cassette sub-family A member ... 137 4e-31
AX883265_1(AX883265|pid:none) Sequence 18170 from Patent EP10746... 137 4e-31
AB067475_1(AB067475|pid:none) Homo sapiens mRNA for KIAA1888 pro... 137 7e-31
AF327705_1(AF327705|pid:none) Homo sapiens ABC transporter ABCA2... 137 7e-31
AB028985_1(AB028985|pid:none) Homo sapiens mRNA for KIAA1062 pro... 137 7e-31
(Q8T6J1) RecName: Full=ABC transporter A family member 6; AltNam... 137 7e-31
AB177854_1(AB177854|pid:none) Homo sapiens mRNA for KIAA1062 spl... 137 7e-31
(Q9BZC7) RecName: Full=ATP-binding cassette sub-family A member ... 137 7e-31
AK047188_1(AK047188|pid:none) Mus musculus 10 days neonate cereb... 136 9e-31
FN357442_20(FN357442|pid:none) Schistosoma mansoni genome sequen... 136 9e-31
AF491842_1(AF491842|pid:none) Mus musculus ATP-binding cassette ... 136 9e-31
AJ550165_1(AJ550165|pid:none) Rattus norvegicus mRNA for ATP-bin... 136 9e-31
AB210040_1(AB210040|pid:none) Homo sapiens mRNA for ABCA4 varian... 136 9e-31
AF001945_1(AF001945|pid:none) Homo sapiens rim ABC transporter (... 136 9e-31
AC146548_28(AC146548|pid:none) Medicago truncatula clone mth2-2p... 136 9e-31
AL671964_2(AL671964|pid:none) Mouse DNA sequence from clone RP23... 136 9e-31
AK296896_1(AK296896|pid:none) Homo sapiens cDNA FLJ51966 complet... 136 9e-31
AX088337_1(AX088337|pid:none) Sequence 1 from Patent WO0114414. ... 136 1e-30
BX842685_2(BX842685|pid:none) Zebrafish DNA sequence from clone ... 136 1e-30
AK301764_1(AK301764|pid:none) Homo sapiens cDNA FLJ51129 complet... 136 1e-30
AK097344_1(AK097344|pid:none) Homo sapiens cDNA FLJ40025 fis, cl... 135 2e-30
AF311102_1(AF311102|pid:none) Homo sapiens ABC transporter ABCA7... 135 2e-30
AK056533_1(AK056533|pid:none) Homo sapiens cDNA FLJ31971 fis, cl... 135 2e-30
AM494964_105(AM494964|pid:none) Leishmania braziliensis chromoso... 135 2e-30
AM494948_96(AM494948|pid:none) Leishmania braziliensis chromosom... 135 2e-30
AY509741_1(AY509741|pid:none) Xenopus tropicalis retinal-specifi... 134 4e-30
AF328787_1(AF328787|pid:none) Homo sapiens ABC transporter membe... 134 4e-30
AX320362_1(AX320362|pid:none) Sequence 1 from Patent WO0187978. ... 134 4e-30
(Q555Z5) RecName: Full=ABC transporter A family member 4; AltNam... 134 5e-30
AF465306_1(AF465306|pid:none) Dictyostelium discoideum ABC trans... 134 5e-30
BC150708_1(BC150708|pid:none) Mus musculus ATP-binding cassette,... 134 5e-30
AY429516_1(AY429516|pid:none) Xenopus laevis retinal ABCA4 trans... 134 5e-30
BC008755_1(BC008755|pid:none) Homo sapiens ATP-binding cassette,... 132 1e-29
AK295489_1(AK295489|pid:none) Homo sapiens cDNA FLJ61118 complet... 132 1e-29
AE014134_2482(AE014134|pid:none) Drosophila melanogaster chromos... 132 1e-29
AE014134_2483(AE014134|pid:none) Drosophila melanogaster chromos... 132 1e-29
AL162060_1(AL162060|pid:none) Homo sapiens mRNA; cDNA DKFZp547P1... 132 1e-29
AB196699_1(AB196699|pid:none) Rattus norvegicus ABCA17 mRNA for ... 132 2e-29
AY247065_1(AY247065|pid:none) Homo sapiens ATP-binding cassette ... 132 2e-29
AX657703_1(AX657703|pid:none) Sequence 3 from Patent WO02103015. 132 2e-29
CT005250_124(CT005250|pid:none) Leishmania major strain Friedlin... 132 2e-29
(Q8WWZ4) RecName: Full=ATP-binding cassette sub-family A member ... 132 2e-29
CT005250_123(CT005250|pid:none) Leishmania major strain Friedlin... 132 2e-29
AK097296_1(AK097296|pid:none) Homo sapiens cDNA FLJ39977 fis, cl... 131 3e-29
AE014298_3224(AE014298|pid:none) Drosophila melanogaster chromos... 131 3e-29
AL603792_4(AL603792|pid:none) Mouse DNA sequence from clone RP23... 131 3e-29
AF498362_1(AF498362|pid:none) Mus musculus ATP-binding cassette ... 131 3e-29
AY028898_1(AY028898|pid:none) Homo sapiens ATP-binding cassette ... 131 3e-29
AL807245_1(AL807245|pid:none) Mouse DNA sequence from clone RP23... 131 3e-29
BC026496_1(BC026496|pid:none) Mus musculus ATP-binding cassette,... 131 3e-29
AE014296_3124(AE014296|pid:none) Drosophila melanogaster chromos... 131 3e-29
AK173034_1(AK173034|pid:none) Mus musculus mRNA for mKIAA0822 pr... 131 3e-29
AK031843_1(AK031843|pid:none) Mus musculus adult male medulla ob... 131 3e-29
AC072062_1(AC072062|pid:none) Homo sapiens BAC clone RP11-548N17... 131 4e-29
BC169142_1(BC169142|pid:none) Xenopus tropicalis ATP-binding cas... 130 5e-29
BC154873_1(BC154873|pid:none) Xenopus tropicalis ATP-binding cas... 130 5e-29
AM502229_121(AM502229|pid:none) Leishmania infantum chromosome 11. 130 5e-29
AM502229_123(AM502229|pid:none) Leishmania infantum chromosome 11. 130 7e-29
CR954218_146(CR954218|pid:none) Ostreococcus tauri strain OTTH05... 130 9e-29
AK125487_1(AK125487|pid:none) Homo sapiens cDNA FLJ43498 fis, cl... 130 9e-29
(Q8K449) RecName: Full=ATP-binding cassette sub-family A member ... 129 1e-28
AL603792_3(AL603792|pid:none) Mouse DNA sequence from clone RP23... 129 1e-28
AL049746_6(AL049746|pid:none) Arabidopsis thaliana DNA chromosom... 129 1e-28
AM494948_101(AM494948|pid:none) Leishmania braziliensis chromoso... 129 2e-28
AY160971_1(AY160971|pid:none) Mus musculus ATP-binding cassette ... 129 2e-28
BC051320_1(BC051320|pid:none) Homo sapiens ATP-binding cassette,... 129 2e-28
AB255881_1(AB255881|pid:none) Mus musculus abca8a mRNA for ABC t... 129 2e-28
AB255882_1(AB255882|pid:none) Mus musculus abca8a mRNA for ABC t... 129 2e-28
AK298508_1(AK298508|pid:none) Homo sapiens cDNA FLJ51271 complet... 129 2e-28
AM494948_100(AM494948|pid:none) Leishmania braziliensis chromoso... 128 3e-28
AP003904_2(AP003904|pid:none) Oryza sativa Japonica Group genomi... 128 3e-28
DQ146416_1(DQ146416|pid:none) Sarcoptes scabiei type hominis ABC... 128 3e-28
AY204751_1(AY204751|pid:none) Homo sapiens ABC A13 mRNA, complet... 128 3e-28
(Q86UQ4) RecName: Full=ATP-binding cassette sub-family A member ... 128 3e-28
AK131360_1(AK131360|pid:none) Homo sapiens cDNA FLJ16398 fis, cl... 128 3e-28
BX640746_1(BX640746|pid:none) Homo sapiens mRNA; cDNA DKFZp686K0... 126 1e-27
T18288(T18288)ABC transport protein - slime mold (Dictyostelium ... 126 1e-27
FN357599_8(FN357599|pid:none) Schistosoma mansoni genome sequenc... 125 2e-27
AB168191_1(AB168191|pid:none) Macaca fascicularis testis cDNA cl... 125 3e-27
CR450809_4(CR450809|pid:none) Zebrafish DNA sequence from clone ... 124 5e-27
CR548612_405(CR548612|pid:none) Paramecium tetraurelia macronucl... 124 6e-27
BC150132_1(BC150132|pid:none) Bos taurus ATP-binding cassette, s... 124 6e-27
CR450809_5(CR450809|pid:none) Zebrafish DNA sequence from clone ... 123 1e-26
AF101313_1(AF101313|pid:none) Caenorhabditis elegans cosmid Y39D... 123 1e-26
BC168134_1(BC168134|pid:none) Xenopus tropicalis cDNA clone MGC:... 123 1e-26
C88925(C88925)protein F33E11.4 [imported] - Caenorhabditis elegans 123 1e-26
AK128516_1(AK128516|pid:none) Homo sapiens cDNA FLJ46673 fis, cl... 122 1e-26
A84845(A84845)probable ABC transporter [imported] - Arabidopsis ... 122 1e-26
CR382131_686(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 122 1e-26
AK091270_1(AK091270|pid:none) Homo sapiens cDNA FLJ33951 fis, cl... 122 1e-26
AK043744_1(AK043744|pid:none) Mus musculus 10 days neonate corte... 122 2e-26
AY028899_1(AY028899|pid:none) Homo sapiens ATP-binding cassette ... 121 3e-26
CR627382_1(CR627382|pid:none) Homo sapiens mRNA; cDNA DKFZp686F2... 121 3e-26
AK165458_1(AK165458|pid:none) Mus musculus adult male kidney cDN... 121 3e-26
AY032590_1(AY032590|pid:none) Arabidopsis thaliana ATP-binding c... 121 4e-26
AB109217_1(AB109217|pid:none) Arabidopsis thaliana abca1 mRNA fo... 121 4e-26
AE014296_3135(AE014296|pid:none) Drosophila melanogaster chromos... 120 7e-26
BC125231_1(BC125231|pid:none) Homo sapiens ATP-binding cassette,... 120 7e-26
AJ844280_1(AJ844280|pid:none) Pecten maximus mRNA for ATP-bindin... 120 7e-26
AB020629_1(AB020629|pid:none) Homo sapiens mRNA for KIAA0822 pro... 120 9e-26
(O94911) RecName: Full=ATP-binding cassette sub-family A member 8; 120 9e-26
BC168468_1(BC168468|pid:none) Danio rerio zgc:172302, mRNA (cDNA... 119 2e-25
AX797494_1(AX797494|pid:none) Sequence 1 from Patent WO03048297. 119 2e-25
AK166397_1(AK166397|pid:none) Mus musculus mammary gland RCB-052... 117 6e-25
AK044229_1(AK044229|pid:none) Mus musculus adult retina cDNA, RI... 116 1e-24
AF165306_1(AF165306|pid:none) Homo sapiens ATP cassette binding ... 116 1e-24
(Q8K441) RecName: Full=ATP-binding cassette sub-family A member ... 115 2e-24
AK007703_1(AK007703|pid:none) Mus musculus 10 day old male pancr... 115 2e-24
AK051920_1(AK051920|pid:none) Mus musculus 12 days embryo eyebal... 115 2e-24
AF213395_1(AF213395|pid:none) Mus musculus ATP-binding cassette ... 115 2e-24
AM489103_1(AM489103|pid:none) Vitis vinifera contig VV78X067185.... 115 3e-24
AP007167_484(AP007167|pid:none) Aspergillus oryzae RIB40 genomic... 114 5e-24
CU633438_347(CU633438|pid:none) Podospora anserina genomic DNA c... 114 6e-24
T00826(T00826)hypothetical protein T32G6.22 - Arabidopsis thalia... 114 6e-24
AM502229_122(AM502229|pid:none) Leishmania infantum chromosome 11. 112 2e-23
CT005254_76(CT005254|pid:none) Leishmania major strain Friedlin,... 110 7e-23
CP000678_1483(CP000678|pid:none) Methanobrevibacter smithii ATCC... 110 9e-23
AF003138_6(AF003138|pid:none) Caenorhabditis elegans cosmid F12B... 109 1e-22
CP000348_2143(CP000348|pid:none) Leptospira borgpetersenii serov... 109 1e-22
T15200(T15200)hypothetical protein F12B6.1 - Caenorhabditis eleg... 109 2e-22
FN357911_4(FN357911|pid:none) Schistosoma mansoni genome sequenc... 108 2e-22
BA000002_1671(BA000002|pid:none) Aeropyrum pernix K1 DNA, comple... 108 3e-22
D72492(D72492)probable ABC transporter ATP-binding protein APE25... 108 3e-22
CP000264_746(CP000264|pid:none) Jannaschia sp. CCS1, complete ge... 108 4e-22
CP000951_2789(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 106 1e-21
CP000680_1210(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 106 1e-21
CP000027_509(CP000027|pid:none) Dehalococcoides ethenogenes 195,... 106 1e-21
BA000043_910(BA000043|pid:none) Geobacillus kaustophilus HTA426 ... 105 2e-21
CP000377_2524(CP000377|pid:none) Silicibacter sp. TM1040, comple... 105 2e-21
CP000923_958(CP000923|pid:none) Thermoanaerobacter sp. X514, com... 105 2e-21
Z29117_11(Z29117|pid:none) Caenorhabditis elegans Cosmid C48B4, ... 105 2e-21
AF213393_1(AF213393|pid:none) Mus musculus ATP-binding cassette ... 105 2e-21
AL807752_21(AL807752|pid:none) Human DNA sequence from clone RP1... 105 2e-21
S60124(S60124;S40724;S40725)transport protein homolog C48B4.4 - ... 105 2e-21
CP000390_1899(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 105 3e-21
CP000077_1575(CP000077|pid:none) Sulfolobus acidocaldarius DSM 6... 104 4e-21
AE010300_969(AE010300|pid:none) Leptospira interrogans serovar l... 103 7e-21
CP000477_36(CP000477|pid:none) Methanosaeta thermophila PT, comp... 103 9e-21
AM746676_5580(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 103 9e-21
AP009049_2203(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 103 9e-21
CP000628_2065(CP000628|pid:none) Agrobacterium radiobacter K84 c... 103 9e-21
AP006716_2613(AP006716|pid:none) Staphylococcus haemolyticus JCS... 103 9e-21
CP001147_1212(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 103 1e-20
BX950229_167(BX950229|pid:none) Methanococcus maripaludis strain... 103 1e-20
CP000254_1479(CP000254|pid:none) Methanospirillum hungatei JF-1,... 103 1e-20
CP000812_1221(CP000812|pid:none) Thermotoga lettingae TMO, compl... 102 1e-20
CP000742_1155(CP000742|pid:none) Methanococcus vannielii SB, com... 102 1e-20
CP000133_2414(CP000133|pid:none) Rhizobium etli CFN 42, complete... 102 2e-20
CP000830_635(CP000830|pid:none) Dinoroseobacter shibae DFL 12, c... 102 3e-20
CP000269_1621(CP000269|pid:none) Janthinobacterium sp. Marseille... 102 3e-20
CP001634_804(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, co... 102 3e-20
AF372655_7(AF372655|pid:none) Rhizobium leguminosarum bv. trifol... 102 3e-20
AX644625_1(AX644625|pid:none) Sequence 7 from Patent WO02099108. 101 3e-20
CP000557_785(CP000557|pid:none) Geobacillus thermodenitrificans ... 101 3e-20
CP000386_741(CP000386|pid:none) Rubrobacter xylanophilus DSM 994... 101 3e-20
CP001034_587(CP001034|pid:none) Natranaerobius thermophilus JW/N... 101 4e-20
BA000011_1068(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA... 101 4e-20
AE009948_259(AE009948|pid:none) Streptococcus agalactiae 2603V/R... 101 4e-20
CP000227_5067(CP000227|pid:none) Bacillus cereus Q1, complete ge... 101 4e-20
CP000780_422(CP000780|pid:none) Candidatus Methanoregula boonei ... 100 6e-20
CP000239_2199(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 100 6e-20
CP000282_2915(CP000282|pid:none) Saccharophagus degradans 2-40, ... 100 6e-20
CP000927_4392(CP000927|pid:none) Caulobacter sp. K31, complete g... 100 6e-20
CP001074_2514(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 100 7e-20
AE005673_3347(AE005673|pid:none) Caulobacter crescentus CB15, co... 100 7e-20
AF143772_31(AF143772|pid:none) Mycobacterium avium strain 2151 g... 100 1e-19
AF125999_22(AF125999|pid:none) Mycobacterium avium glycopeptidol... 100 1e-19
AL445063_221(AL445063|pid:none) Thermoplasma acidophilum complet... 100 1e-19
CP001614_1751(CP001614|pid:none) Teredinibacter turnerae T7901, ... 100 1e-19
AL591688_1895(AL591688|pid:none) Sinorhizobium meliloti 1021 com... 100 1e-19
CP000489_1989(CP000489|pid:none) Paracoccus denitrificans PD1222... 100 1e-19
CP000001_5004(CP000001|pid:none) Bacillus cereus E33L, complete ... 99 2e-19
AE017194_5449(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 99 2e-19
CP001151_348(CP001151|pid:none) Rhodobacter sphaeroides KD131 ch... 99 2e-19
CP001389_1701(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 99 2e-19
BA000001_944(BA000001|pid:none) Pyrococcus horikoshii OT3 DNA, c... 99 2e-19
CP000425_419(CP000425|pid:none) Lactococcus lactis subsp. cremor... 99 2e-19
CP000144_292(CP000144|pid:none) Rhodobacter sphaeroides 2.4.1 ch... 99 2e-19
CP000738_1589(CP000738|pid:none) Sinorhizobium medicae WSM419, c... 99 2e-19
CP000780_1013(CP000780|pid:none) Candidatus Methanoregula boonei... 99 2e-19
AE016958_1238(AE016958|pid:none) Mycobacterium avium subsp. para... 99 2e-19
CP000867_774(CP000867|pid:none) Methanococcus maripaludis C6, co... 99 3e-19
AP009384_240(AP009384|pid:none) Azorhizobium caulinodans ORS 571... 99 3e-19
CP000560_1104(CP000560|pid:none) Bacillus amyloliquefaciens FZB4... 99 3e-19
CP000774_862(CP000774|pid:none) Parvibaculum lavamentivorans DS-... 99 3e-19
CP001034_893(CP001034|pid:none) Natranaerobius thermophilus JW/N... 98 4e-19
CP000937_1285(CP000937|pid:none) Francisella philomiragia subsp.... 98 4e-19
AM502247_77(AM502247|pid:none) Leishmania infantum chromosome 29. 98 4e-19
CP000555_978(CP000555|pid:none) Methylibium petroleiphilum PM1, ... 98 4e-19
AE017226_697(AE017226|pid:none) Treponema denticola ATCC 35405, ... 98 5e-19
CP000855_998(CP000855|pid:none) Thermococcus onnurineus NA1, com... 98 5e-19
CP000441_1296(CP000441|pid:none) Burkholderia ambifaria AMMD chr... 98 5e-19
CP001215_5440(CP001215|pid:none) Bacillus anthracis str. CDC 684... 98 5e-19
CP000386_2584(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 98 5e-19
CP001280_2352(CP001280|pid:none) Methylocella silvestris BL2, co... 98 5e-19
CP000910_774(CP000910|pid:none) Renibacterium salmoninarum ATCC ... 98 5e-19
CP001398_1488(CP001398|pid:none) Thermococcus gammatolerans EJ3,... 97 6e-19
CP000080_61(CP000080|pid:none) Leishmania major strain Friedlin ... 97 6e-19
AM420293_4191(AM420293|pid:none) Saccharopolyspora erythraea NRR... 97 6e-19
CP000356_1485(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 97 6e-19
CP000431_1984(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 97 6e-19
CP001504_505(CP001504|pid:none) Burkholderia glumae BGR1 chromos... 97 6e-19
CP000781_3239(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 97 6e-19
CP000688_489(CP000688|pid:none) Dehalococcoides sp. BAV1, comple... 97 8e-19
AP011115_4882(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 97 8e-19
CP000449_745(CP000449|pid:none) Maricaulis maris MCS10, complete... 97 8e-19
AE010299_830(AE010299|pid:none) Methanosarcina acetivorans str. ... 97 8e-19
CP001177_5300(CP001177|pid:none) Bacillus cereus AH187, complete... 97 8e-19
AP006878_1145(AP006878|pid:none) Thermococcus kodakarensis KOD1 ... 97 8e-19
CP001147_1535(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 97 1e-18
BA000012_3477(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 97 1e-18
AP008230_3465(AP008230|pid:none) Desulfitobacterium hafniense Y5... 97 1e-18
AP008957_5655(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 97 1e-18
AE008923_3651(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 97 1e-18
CP000152_538(CP000152|pid:none) Burkholderia sp. 383 chromosome ... 97 1e-18
AJ965256_405(AJ965256|pid:none) Dehalococcoides sp. CBDB1 comple... 97 1e-18
AE017225_5151(AE017225|pid:none) Bacillus anthracis str. Sterne,... 97 1e-18
EU016666_14(EU016666|pid:none) Uncultured marine microorganism H... 97 1e-18
AE013598_663(AE013598|pid:none) Xanthomonas oryzae pv. oryzae KA... 96 1e-18
AE008922_3611(AE008922|pid:none) Xanthomonas campestris pv. camp... 96 1e-18
CP000682_566(CP000682|pid:none) Metallosphaera sedula DSM 5348, ... 96 1e-18
CP000077_934(CP000077|pid:none) Sulfolobus acidocaldarius DSM 63... 96 1e-18
CP000828_132(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 96 1e-18
EU408356_14(EU408356|pid:none) Uncultured bacterium BLR7 genomic... 96 2e-18
CS302416_1(CS302416|pid:none) Sequence 229 from Patent WO2006056... 96 2e-18
CP001283_5327(CP001283|pid:none) Bacillus cereus AH820, complete... 96 2e-18
CP000431_4740(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 96 2e-18
CP001404_2625(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51... 96 2e-18
CP001399_341(CP001399|pid:none) Sulfolobus islandicus L.S.2.15, ... 96 2e-18
CP001338_1424(CP001338|pid:none) Candidatus Methanosphaerula pal... 96 2e-18
AE017355_4987(AE017355|pid:none) Bacillus thuringiensis serovar ... 96 2e-18
AE016877_5107(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 96 2e-18
BA000023_1920(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 96 2e-18
AJ243712_1(AJ243712|pid:none) Bacillus cereus yvfR (partial), yv... 96 2e-18
AE008691_1993(AE008691|pid:none) Thermoanaerobacter tengcongensi... 96 2e-18
EU408350_5(EU408350|pid:none) Uncultured bacterium BLR9 genomic ... 96 2e-18
CP000157_1119(CP000157|pid:none) Erythrobacter litoralis HTCC259... 96 2e-18
CP000562_242(CP000562|pid:none) Methanoculleus marisnigri JR1, c... 96 2e-18
AM039952_3822(AM039952|pid:none) Xanthomonas campestris pv. vesi... 96 2e-18
AJ248285_26(AJ248285|pid:none) Pyrococcus abyssi complete genome... 96 2e-18
CP000511_3073(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 96 2e-18
CP000386_1530(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 96 2e-18
AM747721_2356(AM747721|pid:none) Burkholderia cenocepacia J2315 ... 96 2e-18
CP001634_1306(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, c... 95 3e-18
CP001111_3874(CP001111|pid:none) Stenotrophomonas maltophilia R5... 95 3e-18
AM743169_4259(AM743169|pid:none) Stenotrophomonas maltophilia K2... 95 3e-18
CP000702_1366(CP000702|pid:none) Thermotoga petrophila RKU-1, co... 95 3e-18
CP000271_741(CP000271|pid:none) Burkholderia xenovorans LB400 ch... 95 3e-18
AJ639836_1(AJ639836|pid:none) Canis familiaris partial abca4 gen... 95 3e-18
AE009950_583(AE009950|pid:none) Pyrococcus furiosus DSM 3638, co... 95 4e-18
AE006641_1032(AE006641|pid:none) Sulfolobus solfataricus P2, com... 95 4e-18
CP001099_1822(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 95 4e-18
AE009441_179(AE009441|pid:none) Pyrobaculum aerophilum str. IM2,... 95 4e-18
CP000916_1188(CP000916|pid:none) Thermotoga neapolitana DSM 4359... 95 4e-18
AP009552_4244(AP009552|pid:none) Microcystis aeruginosa NIES-843... 95 4e-18
CP001186_5340(CP001186|pid:none) Bacillus cereus G9842, complete... 95 4e-18
AE014297_2841(AE014297|pid:none) Drosophila melanogaster chromos... 95 4e-18
CP001176_5277(CP001176|pid:none) Bacillus cereus B4264, complete... 95 4e-18
CP001399_1042(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 95 4e-18
CP000850_2830(CP000850|pid:none) Salinispora arenicola CNS-205, ... 95 4e-18
CP000820_6124(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 95 4e-18
AE006641_1965(AE006641|pid:none) Sulfolobus solfataricus P2, com... 94 5e-18
CP001053_2003(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 94 5e-18
AE000512_1380(AE000512|pid:none) Thermotoga maritima MSB8, compl... 94 5e-18
CP001251_58(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, c... 94 5e-18
AE000512_380(AE000512|pid:none) Thermotoga maritima MSB8, comple... 94 5e-18
AE017355_3176(AE017355|pid:none) Bacillus thuringiensis serovar ... 94 5e-18
AE010299_4211(AE010299|pid:none) Methanosarcina acetivorans str.... 94 5e-18
AE006641_2919(AE006641|pid:none) Sulfolobus solfataricus P2, com... 94 5e-18
CP000702_532(CP000702|pid:none) Thermotoga petrophila RKU-1, com... 94 5e-18
CP000088_289(CP000088|pid:none) Thermobifida fusca YX, complete ... 94 5e-18
CP000764_3684(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 94 5e-18
CP001338_1958(CP001338|pid:none) Candidatus Methanosphaerula pal... 94 5e-18
AP008957_4439(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 94 5e-18
BX640428_156(BX640428|pid:none) Bordetella parapertussis strain ... 94 5e-18
CP000969_546(CP000969|pid:none) Thermotoga sp. RQ2, complete gen... 94 5e-18
CP001013_1918(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 94 7e-18
CP001515_750(CP001515|pid:none) Bifidobacterium animalis subsp. ... 94 7e-18
AP006878_2027(AP006878|pid:none) Thermococcus kodakarensis KOD1 ... 94 7e-18
CP001213_1283(CP001213|pid:none) Bifidobacterium animalis subsp.... 94 7e-18
CP000479_4995(CP000479|pid:none) Mycobacterium avium 104, comple... 94 7e-18
CP000943_1620(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 94 9e-18
CP000473_837(CP000473|pid:none) Solibacter usitatus Ellin6076, c... 94 9e-18
AP006618_732(AP006618|pid:none) Nocardia farcinica IFM 10152 DNA... 94 9e-18
CP000390_2088(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 94 9e-18
CP001614_3545(CP001614|pid:none) Teredinibacter turnerae T7901, ... 94 9e-18
CP000077_2158(CP000077|pid:none) Sulfolobus acidocaldarius DSM 6... 94 9e-18
AM778892_7(AM778892|pid:none) Microcystis aeruginosa PCC 7806 ge... 94 9e-18
AM263198_962(AM263198|pid:none) Listeria welshimeri serovar 6b s... 93 1e-17
CP001407_3350(CP001407|pid:none) Bacillus cereus 03BB102, comple... 93 1e-17
CP000485_2927(CP000485|pid:none) Bacillus thuringiensis str. Al ... 93 1e-17
CP000820_6000(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 93 1e-17
AP006618_5535(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 93 2e-17
BA000004_3979(BA000004|pid:none) Bacillus halodurans C-125 DNA, ... 93 2e-17
CP001146_1687(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 93 2e-17
CP000300_1585(CP000300|pid:none) Methanococcoides burtonii DSM 6... 93 2e-17
BA000030_699(BA000030|pid:none) Streptomyces avermitilis MA-4680... 93 2e-17
CP001186_3353(CP001186|pid:none) Bacillus cereus G9842, complete... 93 2e-17
AP006627_1472(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 93 2e-17
AL939118_233(AL939118|pid:none) Streptomyces coelicolor A3(2) co... 93 2e-17
AH1516(AH1516) ABC transporter (ATP-binding protein) homolog lin... 93 2e-17
CP000529_3542(CP000529|pid:none) Polaromonas naphthalenivorans C... 92 2e-17
AL445065_213(AL445065|pid:none) Thermoplasma acidophilum complet... 92 2e-17
CP000300_359(CP000300|pid:none) Methanococcoides burtonii DSM 62... 92 2e-17
CP001130_1469(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, c... 92 2e-17
AE014133_216(AE014133|pid:none) Streptococcus mutans UA159, comp... 92 2e-17
AM180355_1310(AM180355|pid:none) Clostridium difficile 630 compl... 92 2e-17
BA000002_1634(BA000002|pid:none) Aeropyrum pernix K1 DNA, comple... 92 2e-17
CR555306_3560(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 92 2e-17
BA000035_1017(BA000035|pid:none) Corynebacterium efficiens YS-31... 92 2e-17
AE016877_3261(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 92 3e-17
CP001283_3364(CP001283|pid:none) Bacillus cereus AH820, complete... 92 3e-17
CP000117_418(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 92 3e-17
CP001176_3288(CP001176|pid:none) Bacillus cereus B4264, complete... 92 3e-17
CP000360_2216(CP000360|pid:none) Acidobacteria bacterium Ellin34... 92 3e-17
CP000903_5030(CP000903|pid:none) Bacillus weihenstephanensis KBA... 92 3e-17
CP000494_5769(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 92 3e-17
CP000553_502(CP000553|pid:none) Prochlorococcus marinus str. NAT... 92 3e-17
AB024563_2(AB024563|pid:none) Bacillus halodurans gene for YFIL,... 92 3e-17
AX065393_1(AX065393|pid:none) Sequence 519 from Patent WO0100844... 92 3e-17
CP001251_92(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, c... 92 3e-17
CP000227_3140(CP000227|pid:none) Bacillus cereus Q1, complete ge... 92 3e-17
AP009386_1784(AP009386|pid:none) Burkholderia multivorans ATCC 1... 92 3e-17
CP000930_2727(CP000930|pid:none) Heliobacterium modesticaldum Ic... 92 3e-17
AE017143_1546(AE017143|pid:none) Haemophilus ducreyi strain 3500... 92 3e-17
BA000004_1054(BA000004|pid:none) Bacillus halodurans C-125 DNA, ... 92 3e-17
CP000922_1962(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 92 3e-17
AF465312_1(AF465312|pid:none) Dictyostelium discoideum ABC trans... 92 3e-17
AM039952_4152(AM039952|pid:none) Xanthomonas campestris pv. vesi... 92 3e-17
AX066767_1(AX066767|pid:none) Sequence 349 from Patent WO0100805... 92 3e-17
AP009493_5252(AP009493|pid:none) Streptomyces griseus subsp. gri... 92 3e-17
AE009950_1889(AE009950|pid:none) Pyrococcus furiosus DSM 3638, c... 92 3e-17
CP000682_252(CP000682|pid:none) Metallosphaera sedula DSM 5348, ... 91 5e-17
CP001001_687(CP001001|pid:none) Methylobacterium radiotolerans J... 91 5e-17
AP006878_1580(AP006878|pid:none) Thermococcus kodakarensis KOD1 ... 91 5e-17
BA000037_2766(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 91 5e-17
GM017008_81(GM017008|pid:none) Sequence 1838 from Patent EP19234... 91 5e-17
CP000155_4274(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 91 5e-17
AE000782_1858(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304... 91 5e-17
CP000853_1068(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 91 5e-17
CT573213_4365(CT573213|pid:none) Frankia alni str. ACN14A chromo... 91 6e-17
AC1158(AC1158) ABC transporter (ATP-binding protein) homolog lmo... 91 6e-17
AM902716_3249(AM902716|pid:none) Bordetella petrii strain DSM 12... 91 6e-17
CP000115_2347(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 91 6e-17
CP000903_2297(CP000903|pid:none) Bacillus weihenstephanensis KBA... 91 6e-17
BA000001_1905(BA000001|pid:none) Pyrococcus horikoshii OT3 DNA, ... 91 6e-17
AE017262_693(AE017262|pid:none) Listeria monocytogenes str. 4b F... 91 6e-17
FM242711_673(FM242711|pid:none) Listeria monocytogenes Clip81459... 91 6e-17
AE016830_2996(AE016830|pid:none) Enterococcus faecalis V583, com... 91 8e-17
DQ280500_14(DQ280500|pid:none) Streptomyces olindensis DAUFPE 56... 91 8e-17
CP001472_1415(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 91 8e-17
CP000319_2617(CP000319|pid:none) Nitrobacter hamburgensis X14, c... 91 8e-17
AP009044_1062(AP009044|pid:none) Corynebacterium glutamicum R DN... 91 8e-17
CP000852_1183(CP000852|pid:none) Caldivirga maquilingensis IC-16... 91 8e-17
AM167904_2442(AM167904|pid:none) Bordetella avium 197N complete ... 91 8e-17
AM114193_2881(AM114193|pid:none) Uncultured methanogenic archaeo... 91 8e-17
CP000099_586(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 91 8e-17
AB054887_4(AB054887|pid:none) Streptomyces violaceus rhoF, rhoG,... 91 8e-17
CP000482_2024(CP000482|pid:none) Pelobacter propionicus DSM 2379... 91 8e-17
AE009950_1249(AE009950|pid:none) Pyrococcus furiosus DSM 3638, c... 91 8e-17
CP000250_2015(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 90 1e-16
AE016879_2337(AE016879|pid:none) Bacillus anthracis str. Ames, c... 90 1e-16
CP000227_2319(CP000227|pid:none) Bacillus cereus Q1, complete ge... 90 1e-16
CP000473_79(CP000473|pid:none) Solibacter usitatus Ellin6076, co... 90 1e-16
CP000431_2571(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 90 1e-16
CP001177_2427(CP001177|pid:none) Bacillus cereus AH187, complete... 90 1e-16
CP001322_2032(CP001322|pid:none) Desulfatibacillum alkenivorans ... 90 1e-16
CP000379_275(CP000379|pid:none) Burkholderia cenocepacia AU 1054... 90 1e-16
CP000916_308(CP000916|pid:none) Thermotoga neapolitana DSM 4359,... 90 1e-16
CP000660_2101(CP000660|pid:none) Pyrobaculum arsenaticum DSM 135... 90 1e-16
AJ300302_7(AJ300302|pid:none) Streptomyces griseus partial ORF1,... 90 1e-16
CP001186_2351(CP001186|pid:none) Bacillus cereus G9842, complete... 90 1e-16
CP001399_2062(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 90 1e-16
AE017180_12(AE017180|pid:none) Geobacter sulfurreducens PCA, com... 90 1e-16
CP001402_2037(CP001402|pid:none) Sulfolobus islandicus M.16.4, c... 90 1e-16
CP000557_844(CP000557|pid:none) Geobacillus thermodenitrificans ... 90 1e-16
CP001102_806(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 90 1e-16
AE009441_217(AE009441|pid:none) Pyrobaculum aerophilum str. IM2,... 90 1e-16
CP001339_1835(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, ... 90 1e-16
CP001337_1158(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 90 1e-16
BX842646_125(BX842646|pid:none) Bdellovibrio bacteriovorus compl... 90 1e-16
AP011115_4419(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 90 1e-16
CP000360_4571(CP000360|pid:none) Acidobacteria bacterium Ellin34... 90 1e-16
CP000930_1965(CP000930|pid:none) Heliobacterium modesticaldum Ic... 90 1e-16
BA000036_1567(BA000036|pid:none) Corynebacterium glutamicum ATCC... 89 2e-16
AM295250_2087(AM295250|pid:none) Staphylococcus carnosus subsp. ... 89 2e-16
AP008937_42(AP008937|pid:none) Lactobacillus fermentum IFO 3956 ... 89 2e-16
Y15759_2(Y15759|pid:none) Streptomyces rochei silent ABC transpo... 89 2e-16
FM204883_1547(FM204883|pid:none) Streptococcus equi subsp. equi ... 89 2e-16
AY967108_1(AY967108|pid:none) Synthetic construct isolate FTT143... 89 2e-16
CP000283_3354(CP000283|pid:none) Rhodopseudomonas palustris BisB... 89 2e-16
CP000820_4011(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 89 2e-16
CP000909_142(CP000909|pid:none) Chloroflexus aurantiacus J-10-fl... 89 2e-16
AM263198_635(AM263198|pid:none) Listeria welshimeri serovar 6b s... 89 2e-16
CP000968_1127(CP000968|pid:none) Candidatus Korarchaeum cryptofi... 89 2e-16
CP001615_1032(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 89 2e-16
AE003849_1220(AE003849|pid:none) Xylella fastidiosa 9a5c, comple... 89 2e-16
AP008957_4709(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 89 2e-16
AE017355_2288(AE017355|pid:none) Bacillus thuringiensis serovar ... 89 2e-16
CP000431_4446(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 89 2e-16
AE010299_853(AE010299|pid:none) Methanosarcina acetivorans str. ... 89 2e-16
CP000001_2251(CP000001|pid:none) Bacillus cereus E33L, complete ... 89 2e-16
CP000099_3133(CP000099|pid:none) Methanosarcina barkeri str. Fus... 89 2e-16
AE008384_3135(AE008384|pid:none) Methanosarcina mazei strain Goe... 89 2e-16
CP000903_3055(CP000903|pid:none) Bacillus weihenstephanensis KBA... 89 2e-16
FM242711_922(FM242711|pid:none) Listeria monocytogenes Clip81459... 89 2e-16
AP006878_356(AP006878|pid:none) Thermococcus kodakarensis KOD1 D... 89 2e-16
EF552206_46(EF552206|pid:none) Micromonospora chersina strain M9... 89 3e-16
CP000613_1767(CP000613|pid:none) Rhodospirillum centenum SW, com... 89 3e-16
AE004439_470(AE004439|pid:none) Pasteurella multocida subsp. mul... 89 3e-16
AP008957_1844(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 89 3e-16
CP000249_1454(CP000249|pid:none) Frankia sp. CcI3, complete geno... 89 3e-16
CR543861_2064(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 89 3e-16
CP000089_4127(CP000089|pid:none) Dechloromonas aromatica RCB, co... 89 3e-16
CP001321_20(CP001321|pid:none) Haemophilus parasuis SH0165, comp... 89 3e-16
CP000488_865(CP000488|pid:none) Candidatus Ruthia magnifica str.... 89 3e-16
CP001146_1722(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 89 3e-16
CP000301_3246(CP000301|pid:none) Rhodopseudomonas palustris BisB... 89 3e-16
CP000941_511(CP000941|pid:none) Xylella fastidiosa M12, complete... 89 3e-16
AP011115_6826(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 89 3e-16
AE014613_175(AE014613|pid:none) Salmonella enterica subsp. enter... 88 4e-16
CP001127_182(CP001127|pid:none) Salmonella enterica subsp. enter... 88 4e-16
AE006468_172(AE006468|pid:none) Salmonella enterica subsp. enter... 88 4e-16
AE008384_3223(AE008384|pid:none) Methanosarcina mazei strain Goe... 88 4e-16
CR936257_372(CR936257|pid:none) Natronomonas pharaonis DSM 2160 ... 88 4e-16
CP000850_3858(CP000850|pid:none) Salinispora arenicola CNS-205, ... 88 4e-16
CP000026_169(CP000026|pid:none) Salmonella enterica subsp. enter... 88 4e-16
CP000431_6777(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 88 4e-16
AE017261_1096(AE017261|pid:none) Picrophilus torridus DSM 9790, ... 88 4e-16

>(Q54DT1) RecName: Full=ABC transporter A family member 9; AltName:
Full=ABC transporter ABCA.9;
Length = 845

Score = 443 bits (1139), Expect = e-123
Identities = 223/223 (100%), Positives = 223/223 (100%)
Frame = +2

Query: 158 SCVETLLYFTRLKGVPPEREIQSVESILKEVNLFEVKERLVKELSGGMKRRLSFAVAMTG 337
SCVETLLYFTRLKGVPPEREIQSVESILKEVNLFEVKERLVKELSGGMKRRLSFAVAMTG
Sbjct: 621 SCVETLLYFTRLKGVPPEREIQSVESILKEVNLFEVKERLVKELSGGMKRRLSFAVAMTG 680

Query: 338 DSSIIFLDEPSTGISSELRRDLWRTINDLKKNRSIILTTHSMEEADVLSSRIAIISQGKL 517
DSSIIFLDEPSTGISSELRRDLWRTINDLKKNRSIILTTHSMEEADVLSSRIAIISQGKL
Sbjct: 681 DSSIIFLDEPSTGISSELRRDLWRTINDLKKNRSIILTTHSMEEADVLSSRIAIISQGKL 740

Query: 518 QCIGTQNHLKAKFGDGYSVRINVEEPYINTHNPTELITKFSPQAVLTESFDGSYNYRFPK 697
QCIGTQNHLKAKFGDGYSVRINVEEPYINTHNPTELITKFSPQAVLTESFDGSYNYRFPK
Sbjct: 741 QCIGTQNHLKAKFGDGYSVRINVEEPYINTHNPTELITKFSPQAVLTESFDGSYNYRFPK 800

Query: 698 NTVISDLYQYLVSHKYDHHLQEWSFSQTSLEDVFLKISANDDT 826
NTVISDLYQYLVSHKYDHHLQEWSFSQTSLEDVFLKISANDDT
Sbjct: 801 NTVISDLYQYLVSHKYDHHLQEWSFSQTSLEDVFLKISANDDT 843

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 977,564,435
Number of extensions: 17895064
Number of successful extensions: 80440
Number of sequences better than 10.0: 26333
Number of HSP's gapped: 73239
Number of HSP's successfully gapped: 28396
Length of query: 319
Length of database: 1,051,180,864
Length adjustment: 128
Effective length of query: 191
Effective length of database: 636,901,312
Effective search space: 121648150592
Effective search space used: 121648150592
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.96 gvh: 0.55 alm: 0.34 top: 0.47 tms: 0.00 mit: 0.30 mip: 0.07
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

24.0 %: cytoplasmic
24.0 %: nuclear
20.0 %: extracellular, including cell wall
16.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: vacuolar
4.0 %: vesicles of secretory system
4.0 %: endoplasmic reticulum

>> prediction for Contig-U11954-1 is cyt

VS (DIR, S) 1
VH (FL, L) 1
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 1