Contig-U11939-1
Contig ID Contig-U11939-1
Contig update 2002.12.18
Contig sequence
>Contig-U11939-1 (Contig-U11939-1Q) /CSM_Contig/Contig-U11939-1Q.Seq.d
ATTTACAATAAATAAACAAAAGCATAAACTGTAATATTATTACGAAAAAC
ACATATTTTTTTTATTTTTTTAAAATTTATTAAAAAAAATAATTGTGTTT
TTTTGAAAAAAAAAAAAAAAATAAAATTGGAAAATGAAAATCAAAATTGG
AAATATTTTAAAAAATGTGGTAATTTTGGTAATTTTTAGTTTATTTATTT
CAAAAATTAATTCAGAAGTTGTTAAACCAAACCCAGCTAAGCCAGATGAA
TTGGTAATAGCATTTATGTCACCATATTTCGACCCAGAATATACCCAATA
CAGTGGTGCAGCAGAATATGCACTTAGTAAATTCAATGAAACCTTTAAAA
CCAAATATTCAAAAACCATTAAATTGCATACATTTACTGATACAAATGAT
GTTATTGATTCCTTGGATTTAGTGACAATGCCAGTCAATGGTATTGTTGG
TCCAGCGTATTCAGGTTCATCATCAACTGCATGTTTAGTATTTGGAGCAT
TTGCAGTTCCAAGTATAAGTTTTTATGCTACAGGTGCAAGTCTTTCAAAT
AGTGGATCCTATCCATATTTCCAACGTGTTATGCCAGACGATCGTTTACA
AGTACAAGCAATTCTATCATTATTGAAAAAGAATGGTTGGACTCGTGTTT
CATGTATTCATACCAATGAAGATTATGGTAATGGGTGGTGCTGATCAATT
GGTTCAACAATCAAATGCACAAGGTATCACAGTTAATACCAATCAAGCTA
TCGATCCAGTTGATAATGGCATTGCACCAGAACAACTATATTATGATATC
GTATTTGACAATTTAGAAGCTGCCAAATCCAGAGTGATTGTATTGTATGC
TCTCTTCCCACCAGATTTACTTGGTGTTTTAGCAACTTTCCCAAGTTATG
GTTTAGGTACTGAAGCCTATACTGACTTTGAGAGAACCATTGTCAACGAT
TATAACAACAACACCGGTGATGCTTTCTATAANGGTGCATCATTTTCATA
TGATGCCACCTATGCAATGTTAATGGGAATTGAAGCGGT----------C
TCAAATGCTAGAAAATTCAAAATCATTCGTATCACCAATAAATTCATTAT
CACTCTTGTAGGTGGTTTCGTATTACTCGAAAGTATTTTCATGATCATTT
GGACTGCAGTCGATAGACCAATTCCATTGGCTGAACCAATCTTTAAAGCT
GGTGAAGCTCAACTTCAATGTACTTCAGATTCTGAAGCTTGGTGGTATGT
TTTCGTTTTCTATAAAGTATTTTACATTCTTTTTGGTGTATTTTTAGCTT
TTAAAACAAGAAATGTTGTTGATTCTTTAAATGAATCAAAACCAATTACT
TTAGCTTTATATAATTTAACATTTGTTATGGTTGTGTGCAATTGCACTTG
GTTTTATTTTAAGAGATAATCCAATTGCAATTATTGTAATTCAAACAATT
GCAATTTTACTTGGATTTACAGTTACAGTATCAGTACTTTTCTTACCAAA
GGTTTGGATGATTTTATCTGGTCAACAACATTCAATGGATTCAATTGGTA
CCTCAATGGATTCAATGGGAAGATCAAATGGTAATACCACAGAAGCAGAG
TCAACTAGAGGTTACACAAATAAAGATTACAATAATCAATCAGTTGGTAG
ATCATTCTCTGCTCATGCCACTGGTTTCAAAGATGTCGCTCCATCAAATC
ATCCACAACTTGGTATTGTTTATACTGGTGGTGATAATTTCCCAAGAGTT
GGTTCTTCACAAACAGCTGCTTCAAGAAGTGAAGCTGAAATTAATGTTAG
TAAAGATGTTTTAGCAAAAGCAAATAAAAAGAAGAAGAAGAATACTGGGA
ATCTTCTTCAAAACCATCCGAGGATAATATTTAAAAAAAAAAAAAAAAAA
AAAAAAATAACAATAAATAAGGTGTCAACACCGCTATGGCAACTTTTGTA
AAATTAAAAAAAAAAAAAA

Gap gap included
Contig length 1959
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 176597
End point 174636
Strand (PLUS/MINUS) MINUS
Number of clones 31
Number of EST 49
Link to clone list U11939
List of clone(s)

est1=SHE532F,-8,114
est2=VHA585F,1,115
est3=VHD688F,1,115
est4=VHI330F,1,116
est5=VHP466F,1,115
est6=VHI792F,2,116
est7=VHG140F,5,116
est8=SHI321F,7,114
est9=VHA571F,7,115
est10=VHK783F,7,115
est11=VHO723F,7,115
est12=VHB603F,10,115
est13=VHB864F,10,115
est14=VHD520F,10,115
est15=VHI869F,10,116
est16=VHK392F,10,116
est17=VHF340F,12,115
est18=VHI234F,14,116
est19=SSI124F,36,626
est20=VHL723F,207,810
est21=CHR346F,374,1039
est22=VHD520Z,1040,1859
est23=VHO723Z,1059,1676
est24=VSI211E,1081,1831
est25=VHK392Z,1105,1855
est26=VHB603Z,1107,1863
est27=CHR346Z,1109,1822
est28=VHP466Z,1109,1856
est29=VHA571Z,1118,1713
est30=VHN212Z,1122,1757
est31=VHI234Z,1127,1684
est32=VHL723Z,1140,1822
est33=VHB864Z,1176,1734
est34=VHN310Z,1180,1714
est35=VHK783Z,1184,1605
est36=VHI330Z,1185,1669
est37=VHI869Z,1185,1855
est38=VHD688Z,1186,1823
est39=VHF340Z,1187,1682
est40=VHN716Z,1193,1717
est41=VHG140Z,1256,1862
est42=VHJ749Z,1259,1706
est43=CHR494Z,1263,1714
est44=VHA585Z,1263,1731
est45=VHG225Z,1280,1833
est46=VHH310Z,1290,1855
est47=SSI124Z,1379,1959
est48=VHO349Z,1389,1788
est49=VHD516Z,1397,1833
Translated Amino Acid sequence
lq*inksincniitkntyffyffkiy*kk*lcffekkkknkigk*kskleif*kmw*fw*
flvylfqkliqkllnqtqlsqmnw**hlchhistqnipntvvqqnmhlvnsmkplkpniq
kplncihlliqmmllipwi**qcqsmvllvqriqvhhqlhv*ylehlqfqv*vfmlqvqv
fqivdpihisnvlcqtivykykqfyhy*KRMVGLVFHVFIPMKIMVMGGADQLVQQSNAQ
GITVNTNQAIDPVDNGIAPEQLYYDIVFDNLEAAKSRVIVLYALFPPDLLGVLATFPSYG
LGTEAYTDFERTIVNDYNNNTGDAFYXGASFSYDATYAMLMGIEA---

---SNARKFKIIRITNKFIITLVGGFVLLESIFMIIWTAVDRPIPLAEPIFKAGEAQLQC
TSDSEAWWYVFVFYKVFYILFGVFLAFKTRNVVDSLNESKPITLALYNLTFVMVVCNCTW
FYFKR*sncnycnsnncnftwiysysistfltkglddfiwsttfngfnwylngfngkikw
*yhrsrvn*rlhk*rlq*sisw*iilcschwfqrcrsikssttwyclyww**fpkswfft
nscfkk*s*n*c**rcfsksk*keeeeywessskpsedni*kkkkkkknnnk*gvntama
tfvklkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
iynk*tka*tvillrkthiffiflkfikknncvflkkkkkiklenenqnwkyfkkcgnfg
nf*fiyfkn*frsc*tkps*ar*ignsiyvtifrpriypiqwcsrict**iq*nl*nqif
knh*iayiy*yk*cy*flgfsdnasqwycwssvfrfiincmfsiwsicsskykflcyrck
sfk*wilsifptcyarrsftstsnsiiiekewldscfmysyq*rlw*wvvlinwfnnqmh
kvsqlipiklsiqlimalhqnnyimisylti*klpnpe*lycmlsshqiylvf*qlsqvm
v*vlkpiltlreplstiitttpvmlsixvhhfhmmppmqc*welkr---

---lkc*kiqnhsyhq*ihyhscrwfritrkyfhdhldcsr*tnsig*tnl*sw*sstsm
yfrf*slvvcfrfl*silhsfwcifsf*nkkcc*ffk*iktnyfsfi*fnicygcvqlhl
vlf*eiiqlqll*fkqlqfyldlqlqyqyfsyqrfg*fylvnniqwiqlvpqwiqwedqm
vipqkqsqlevtqikitiinqlvdhsllmplvskmslhqiihnlvlfilvviisqelvlh
kqllqevklklmlvkmf*qkqikrrrrilgiffktirg*ylkkkkkkkk*q*ircqhryg
nfckikkkk

Frame B:
ftinkqkhkl*yyyekhifflff*nllkkiivff*kkkkk*nwkmkikignilknvvilv
ifslfiskinsevvkpnpakpdelviafmspyfdpeytqysgaaeyalskfnetfktkys
ktiklhtftdtndvidsldlvtmpvngivgpaysgssstaclvfgafavpsisfyatgas
lsnsgsypyfqrvmpddrlqvqailsllkkngwtrvscihtnedygngwc*sigstikct
ryhs*yqssyrss**whctrttil*yri*qfrscqiqsdcivcslptrftwcfsnfpklw
fry*sly*l*enhcqrl*qqhr*cfl*xciifi*chlcnvngn*sg---

---SNARKFKIIRITNKFIITLVGGFVLLESIFMIIWTAVDRPIPLAEPIFKAGEAQLQC
TSDSEAWWYVFVFYKVFYILFGVFLAFKTRNVVDSLNESKPITLALYNLTFVMVVCNCTW
FYFKR*sncnycnsnncnftwiysysistfltkglddfiwsttfngfnwylngfngkikw
*yhrsrvn*rlhk*rlq*sisw*iilcschwfqrcrsikssttwyclyww**fpkswfft
nscfkk*s*n*c**rcfsksk*keeeeywessskpsedni*kkkkkkknnnk*gvntama
tfvklkkkk

Frame C:
lq*inksincniitkntyffyffkiy*kk*lcffekkkknkigk*kskleif*kmw*fw*
flvylfqkliqkllnqtqlsqmnw**hlchhistqnipntvvqqnmhlvnsmkplkpniq
kplncihlliqmmllipwi**qcqsmvllvqriqvhhqlhv*ylehlqfqv*vfmlqvqv
fqivdpihisnvlcqtivykykqfyhy*KRMVGLVFHVFIPMKIMVMGGADQLVQQSNAQ
GITVNTNQAIDPVDNGIAPEQLYYDIVFDNLEAAKSRVIVLYALFPPDLLGVLATFPSYG
LGTEAYTDFERTIVNDYNNNTGDAFYXGASFSYDATYAMLMGIEA---

---qmlensksfvspinslsll*vvsyyskvfs*sfglqsidqfhwlnqslklvklnfnv
lqilklggmfsfsikyftfflvyf*llkqemllil*mnqnqll*lyii*hllwlcaialg
filrdnpiaiiviqtiaillgftvtvsvlflpkvwmilsgqqhsmdsigtsmdsmgrsng
ntteaestrgytnkdynnqsvgrsfsahatgfkdvapsnhpqlgivytggdnfprvgssq
taasrseaeinvskdvlakankkkkkntgnllqnhpriifkkkkkkkkitinkvstplwq
ll*n*kkkk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11939-1 (Contig-U11939-1Q)
/CSM_Contig/Contig-U11939-1Q.Seq.d
(1969 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11939-1 (Contig-U11939-1Q) /CSM_Contig/Conti... 3245 0.0
Contig-U11045-1 (Contig-U11045-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U12097-1 (Contig-U12097-1Q) /CSM_Contig/Conti... 44 6e-04
Contig-U13936-1 (Contig-U13936-1Q) /CSM_Contig/Conti... 38 0.035
Contig-U03989-1 (Contig-U03989-1Q) /CSM_Contig/Conti... 38 0.035
Contig-U14465-1 (Contig-U14465-1Q) /CSM_Contig/Conti... 36 0.14
Contig-U14078-1 (Contig-U14078-1Q) /CSM_Contig/Conti... 36 0.14
Contig-U13486-1 (Contig-U13486-1Q) /CSM_Contig/Conti... 36 0.14
Contig-U13404-1 (Contig-U13404-1Q) /CSM_Contig/Conti... 36 0.14
Contig-U12695-1 (Contig-U12695-1Q) /CSM_Contig/Conti... 36 0.14

>Contig-U11939-1 (Contig-U11939-1Q) /CSM_Contig/Contig-U11939-1Q.Seq.d
Length = 1969

Score = 3245 bits (1637), Expect = 0.0
Identities = 1670/1670 (100%)
Strand = Plus / Plus


Query: 213 cagaagttgttaaaccaaacccagctaagccagatgaattggtaatagcatttatgtcac 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 cagaagttgttaaaccaaacccagctaagccagatgaattggtaatagcatttatgtcac 272


Query: 273 catatttcgacccagaatatacccaatacagtggtgcagcagaatatgcacttagtaaat 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 catatttcgacccagaatatacccaatacagtggtgcagcagaatatgcacttagtaaat 332


Query: 333 tcaatgaaacctttaaaaccaaatattcaaaaaccattaaattgcatacatttactgata 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tcaatgaaacctttaaaaccaaatattcaaaaaccattaaattgcatacatttactgata 392


Query: 393 caaatgatgttattgattccttggatttagtgacaatgccagtcaatggtattgttggtc 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 caaatgatgttattgattccttggatttagtgacaatgccagtcaatggtattgttggtc 452


Query: 453 cagcgtattcaggttcatcatcaactgcatgtttagtatttggagcatttgcagttccaa 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cagcgtattcaggttcatcatcaactgcatgtttagtatttggagcatttgcagttccaa 512


Query: 513 gtataagtttttatgctacaggtgcaagtctttcaaatagtggatcctatccatatttcc 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gtataagtttttatgctacaggtgcaagtctttcaaatagtggatcctatccatatttcc 572


Query: 573 aacgtgttatgccagacgatcgtttacaagtacaagcaattctatcattattgaaaaaga 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 aacgtgttatgccagacgatcgtttacaagtacaagcaattctatcattattgaaaaaga 632


Query: 633 atggttggactcgtgtttcatgtattcataccaatgaagattatggtaatgggtggtgct 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 atggttggactcgtgtttcatgtattcataccaatgaagattatggtaatgggtggtgct 692


Query: 693 gatcaattggttcaacaatcaaatgcacaaggtatcacagttaataccaatcaagctatc 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 gatcaattggttcaacaatcaaatgcacaaggtatcacagttaataccaatcaagctatc 752


Query: 753 gatccagttgataatggcattgcaccagaacaactatattatgatatcgtatttgacaat 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 gatccagttgataatggcattgcaccagaacaactatattatgatatcgtatttgacaat 812


Query: 813 ttagaagctgccaaatccagagtgattgtattgtatgctctcttcccaccagatttactt 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 ttagaagctgccaaatccagagtgattgtattgtatgctctcttcccaccagatttactt 872


Query: 873 ggtgttttagcaactttcccaagttatggtttaggtactgaagcctatactgactttgag 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 ggtgttttagcaactttcccaagttatggtttaggtactgaagcctatactgactttgag 932


Query: 933 agaaccattgtcaacgattataacaacaacaccggtgatgctttctataanggtgcatca 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 agaaccattgtcaacgattataacaacaacaccggtgatgctttctataanggtgcatca 992


Query: 993 ttttcatatgatgccacctatgcaatgttaatgggaattgaagcggtnnnnnnnnnnctc 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 ttttcatatgatgccacctatgcaatgttaatgggaattgaagcggtnnnnnnnnnnctc 1052


Query: 1053 aaatgctagaaaattcaaaatcattcgtatcaccaataaattcattatcactcttgtagg 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 aaatgctagaaaattcaaaatcattcgtatcaccaataaattcattatcactcttgtagg 1112


Query: 1113 tggtttcgtattactcgaaagtattttcatgatcatttggactgcagtcgatagaccaat 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 tggtttcgtattactcgaaagtattttcatgatcatttggactgcagtcgatagaccaat 1172


Query: 1173 tccattggctgaaccaatctttaaagctggtgaagctcaacttcaatgtacttcagattc 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 tccattggctgaaccaatctttaaagctggtgaagctcaacttcaatgtacttcagattc 1232


Query: 1233 tgaagcttggtggtatgttttcgttttctataaagtattttacattctttttggtgtatt 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1233 tgaagcttggtggtatgttttcgttttctataaagtattttacattctttttggtgtatt 1292


Query: 1293 tttagcttttaaaacaagaaatgttgttgattctttaaatgaatcaaaaccaattacttt 1352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1293 tttagcttttaaaacaagaaatgttgttgattctttaaatgaatcaaaaccaattacttt 1352


Query: 1353 agctttatataatttaacatttgttatggttgtgtgcaattgcacttggttttattttaa 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1353 agctttatataatttaacatttgttatggttgtgtgcaattgcacttggttttattttaa 1412


Query: 1413 gagataatccaattgcaattattgtaattcaaacaattgcaattttacttggatttacag 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1413 gagataatccaattgcaattattgtaattcaaacaattgcaattttacttggatttacag 1472


Query: 1473 ttacagtatcagtacttttcttaccaaaggtttggatgattttatctggtcaacaacatt 1532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1473 ttacagtatcagtacttttcttaccaaaggtttggatgattttatctggtcaacaacatt 1532


Query: 1533 caatggattcaattggtacctcaatggattcaatgggaagatcaaatggtaataccacag 1592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1533 caatggattcaattggtacctcaatggattcaatgggaagatcaaatggtaataccacag 1592


Query: 1593 aagcagagtcaactagaggttacacaaataaagattacaataatcaatcagttggtagat 1652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1593 aagcagagtcaactagaggttacacaaataaagattacaataatcaatcagttggtagat 1652


Query: 1653 cattctctgctcatgccactggtttcaaagatgtcgctccatcaaatcatccacaacttg 1712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1653 cattctctgctcatgccactggtttcaaagatgtcgctccatcaaatcatccacaacttg 1712


Query: 1713 gtattgtttatactggtggtgataatttcccaagagttggttcttcacaaacagctgctt 1772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1713 gtattgtttatactggtggtgataatttcccaagagttggttcttcacaaacagctgctt 1772


Query: 1773 caagaagtgaagctgaaattaatgttagtaaagatgttttagcaaaagcaaataaaaaga 1832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1773 caagaagtgaagctgaaattaatgttagtaaagatgttttagcaaaagcaaataaaaaga 1832


Query: 1833 agaagaagaatactgggaatcttcttcaaaaccatccgaggataatattt 1882
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1833 agaagaagaatactgggaatcttcttcaaaaccatccgaggataatattt 1882


Score = 109 bits (55), Expect = 1e-23
Identities = 55/55 (100%)
Strand = Plus / Plus


Query: 1 atttacaataaataaacaaaagcataaactgtaatattattacgaaaaacacata 55
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttacaataaataaacaaaagcataaactgtaatattattacgaaaaacacata 55


Score = 95.6 bits (48), Expect = 2e-19
Identities = 48/48 (100%)
Strand = Plus / Plus


Query: 1908 taacaataaataaggtgtcaacaccgctatggcaacttttgtaaaatt 1955
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1908 taacaataaataaggtgtcaacaccgctatggcaacttttgtaaaatt 1955


Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus


Query: 72 aaaatttattaaaaaaaataattgtgtttttttg 105
||||||||||||||||||||||||||||||||||
Sbjct: 72 aaaatttattaaaaaaaataattgtgtttttttg 105


>Contig-U11045-1 (Contig-U11045-1Q) /CSM_Contig/Contig-U11045-1Q.Seq.d
Length = 1908

Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 1175 cattggctgaaccaatctttaaa 1197
|||||||||||||||||||||||
Sbjct: 1104 cattggctgaaccaatctttaaa 1126


>Contig-U12097-1 (Contig-U12097-1Q) /CSM_Contig/Contig-U12097-1Q.Seq.d
Length = 2470

Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus


Query: 1193 ttaaagctggtgaagctcaacttcaa 1218
||||||||| ||||||||||||||||
Sbjct: 120 ttaaagctgctgaagctcaacttcaa 145


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 27,899
Number of Sequences: 6905
Number of extensions: 27899
Number of successful extensions: 3450
Number of sequences better than 10.0: 353
length of query: 1969
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1953
effective length of database: 5,564,391
effective search space: 10867255623
effective search space used: 10867255623
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.27
Homology vs DNA
Query= Contig-U11939-1 (Contig-U11939-1Q) /CSM_Contig/Contig-U11939-1Q.Seq.d
(1969 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ424967) Dictyostelium discoideum cDNA clone:ddv54n05, 5' ... 1185 0.0 1
(DQ447637) Dictyostelium discoideum GluPR (GluPR) mRNA, comp... 936 0.0 2
(BJ440362) Dictyostelium discoideum cDNA clone:ddv43o09, 3' ... 922 0.0 2
(BJ438653) Dictyostelium discoideum cDNA clone:ddv38g05, 3' ... 916 0.0 2
(BJ443081) Dictyostelium discoideum cDNA clone:ddv51h23, 3' ... 906 0.0 3
(BJ440885) Dictyostelium discoideum cDNA clone:ddv45d03, 3' ... 906 0.0 3
(BJ385867) Dictyostelium discoideum cDNA clone:ddc56l11, 3' ... 874 0.0 3
(BJ446066) Dictyostelium discoideum cDNA clone:ddv61d18, 3' ... 870 0.0 5
(BJ437367) Dictyostelium discoideum cDNA clone:ddv34e02, 3' ... 807 0.0 6
(BJ443808) Dictyostelium discoideum cDNA clone:ddv54n05, 3' ... 787 0.0 4
(BJ442031) Dictyostelium discoideum cDNA clone:ddv48j18, 3' ... 765 0.0 5
(BJ444659) Dictyostelium discoideum cDNA clone:ddv57g04, 3' ... 755 0.0 3
(BJ371038) Dictyostelium discoideum cDNA clone:ddc56l11, 5' ... 692 0.0 2
(BJ445652) Dictyostelium discoideum cDNA clone:ddv60n05, 3' ... 595 0.0 3
(AU268326) Dictyostelium discoideum vegetative cDNA clone:VS... 886 0.0 2
(BJ440290) Dictyostelium discoideum cDNA clone:ddv43a08, 3' ... 874 0.0 2
(BJ436931) Dictyostelium discoideum cDNA clone:ddv32m17, 3' ... 656 0.0 3
(C90129) Dictyostelium discoideum slug cDNA, clone SSI124. 882 0.0 3
(BJ438942) Dictyostelium discoideum cDNA clone:ddv38o22, 3' ... 781 0.0 3
(BJ437586) Dictyostelium discoideum cDNA clone:ddv34p16, 3' ... 704 0.0 3
(BJ441611) Dictyostelium discoideum cDNA clone:ddv47c10, 3' ... 613 0.0 3
(BJ445031) Dictyostelium discoideum cDNA clone:ddv58p03, 3' ... 676 0.0 4
(BJ444646) Dictyostelium discoideum cDNA clone:ddv57d03, 3' ... 632 0.0 3
(BJ441650) Dictyostelium discoideum cDNA clone:ddv47l07, 3' ... 583 0.0 3
(BJ386022) Dictyostelium discoideum cDNA clone:ddc56l24, 3' ... 666 0.0 2
(BJ439747) Dictyostelium discoideum cDNA clone:ddv41p09, 3' ... 577 0.0 3
(BJ442629) Dictyostelium discoideum cDNA clone:ddv50b13, 3' ... 624 0.0 2
(BJ438696) Dictyostelium discoideum cDNA clone:ddv38o03, 3' ... 757 0.0 1
(BJ436993) Dictyostelium discoideum cDNA clone:ddv32i21, 3' ... 575 0.0 3
(BJ445447) Dictyostelium discoideum cDNA clone:ddv59b13, 3' ... 648 0.0 2
(AU268325) Dictyostelium discoideum vegetative cDNA clone:VS... 420 0.0 2
(BJ443402) Dictyostelium discoideum cDNA clone:ddv52f21, 3' ... 454 0.0 3
(AU073708) Dictyostelium discoideum slug cDNA, clone SSI124. 121 3e-27 2
(BJ427172) Dictyostelium discoideum cDNA clone:ddv61d18, 5' ... 109 4e-19 1
(BJ422897) Dictyostelium discoideum cDNA clone:ddv47l07, 5' ... 109 4e-19 1
(BJ420331) Dictyostelium discoideum cDNA clone:ddv38o22, 5' ... 109 4e-19 1
(BJ418466) Dictyostelium discoideum cDNA clone:ddv32i21, 5' ... 109 4e-19 1
(BJ423330) Dictyostelium discoideum cDNA clone:ddv48h23, 5' ... 107 2e-18 1
(BJ421670) Dictyostelium discoideum cDNA clone:ddv43o09, 5' ... 101 1e-16 1
(BJ426770) Dictyostelium discoideum cDNA clone:ddv60n05, 5' ... 98 2e-15 1
(BJ424546) Dictyostelium discoideum cDNA clone:ddv52f21, 5' ... 98 2e-15 1
(BJ418410) Dictyostelium discoideum cDNA clone:ddv32m17, 5' ... 98 2e-15 1
(BJ395774) Dictyostelium discoideum cDNA clone:dds40j05, 5' ... 98 2e-15 1
(BJ394007) Dictyostelium discoideum cDNA clone:dds33o07, 5' ... 96 6e-15 1
(BJ424247) Dictyostelium discoideum cDNA clone:ddv51h23, 5' ... 92 1e-13 1
(BJ423269) Dictyostelium discoideum cDNA clone:ddv48j18, 5' ... 92 1e-13 1
(BJ420056) Dictyostelium discoideum cDNA clone:ddv38g05, 5' ... 92 1e-13 1
(BJ419000) Dictyostelium discoideum cDNA clone:ddv34p16, 5' ... 92 1e-13 1
(BJ418796) Dictyostelium discoideum cDNA clone:ddv34e02, 5' ... 92 1e-13 1
(BJ422860) Dictyostelium discoideum cDNA clone:ddv47c10, 5' ... 84 2e-11 1
(BJ421027) Dictyostelium discoideum cDNA clone:ddv41p09, 5' ... 84 2e-11 1
(AC156059) Bos taurus clone CH240-47G13, WORKING DRAFT SEQUE... 52 0.082 1
(AC224649) Bos taurus clone CH240-47G12, WORKING DRAFT SEQUE... 52 0.082 1
(AC224546) Bos taurus clone CH240-482E16, WORKING DRAFT SEQU... 52 0.082 1
(AC040995) Homo sapiens chromosome 4 clone RP11-328N8 map 4,... 42 0.22 5
(CP000551) Prochlorococcus marinus str. AS9601, complete gen... 40 0.88 23
(CU928554) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 1.3 5
(CR536619) Zebrafish DNA sequence from clone CH211-194H19 in... 48 1.3 1
(BX296535) Zebrafish DNA sequence from clone CH211-234I2 in ... 48 1.3 1
(AL669828) Mouse DNA sequence from clone RP23-163J20 on chro... 48 1.3 1
(AC069545) Homo sapiens chromosome 10 clone RP11-478B11, com... 48 1.3 1
(CU695186) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 1.3 1
(CU179706) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 1.3 1
(AL713976) Human DNA sequence *** SEQUENCING IN PROGRESS ***... 48 1.3 1
(AC231002) Bos taurus clone CH240-493I4, WORKING DRAFT SEQUE... 48 1.3 1
(AC224426) Bos taurus clone CH240-485P13, WORKING DRAFT SEQU... 48 1.3 1
(AC169009) Sorex araneus clone SA_Ba-34A18, WORKING DRAFT SE... 48 1.3 1
(AC167632) Bos taurus clone CH240-137P9, *** SEQUENCING IN P... 48 1.3 1
(AQ552669) RPCI-11-417C13.TJ RPCI-11 Homo sapiens genomic cl... 48 1.3 1
(ED012862) MUGQ_CH252P100J11T7_CN14_088 CHORI-252 Vervet Mon... 48 1.3 1
(AL446255) Paramecium tetraurelia sequence M01C12r of the en... 48 1.3 1
(BZ059036) lkz42f09.b1 B.oleracea002 Brassica oleracea genom... 48 1.3 1
(AC223375) Bos taurus clone CH240-421C2, WORKING DRAFT SEQUE... 38 2.6 5
(CT224528) Sus scrofa genomic clone CH242-234P16, genomic su... 34 3.4 2
(DX339333) OR_ABa0265O24.f OR_ABa Oryza ridleyi genomic clon... 38 4.0 2
(AC184428) Strongylocentrotus purpuratus clone R3-3076F14, W... 42 4.0 5
(BV629047) S215P6419RA7.T0 Clara Pan troglodytes troglodytes... 46 5.1 1
(CT025618) Mouse DNA sequence from clone RP24-268L19 on chro... 46 5.1 1
(AC154227) Mus musculus BAC clone RP24-142A23 from chromosom... 46 5.1 1
(AC118539) Mus musculus strain 129/Sv clone ct7-282g9 map 14... 46 5.1 1
(AC186880) Pan troglodytes BAC clone CH251-371A9 from chromo... 46 5.1 1
(AC092405) Papio anubis clone RP41-170F23, complete sequence. 46 5.1 1
(AM482591) Vitis vinifera contig VV78X210526.9, whole genome... 46 5.1 1
(AC182561) Mimulus guttatus clone MGBa-28L18, complete seque... 46 5.1 1
(CU407185) Pig DNA sequence from clone CH242-273G15 on chrom... 46 5.1 1
(AC187700) Sorex araneus clone SA_Ba-325L16, complete sequence. 46 5.1 1
(AL645565) Human DNA sequence from clone RP11-397M22 on chro... 46 5.1 1
(AL358338) Human chromosome 14 DNA sequence BAC C-2082C19 of... 46 5.1 1
(AC008045) Homo sapiens chromosome 14q31 clone CTD-2552H2 co... 46 5.1 1
(AC002528) Human BAC clone GS1-542D18 from 7q31-q32, complet... 46 5.1 1
(AC149742) Bos taurus clone CH240-24O5, WORKING DRAFT SEQUEN... 46 5.1 1
(AC119056) Papio anubis clone RP41-356H11, WORKING DRAFT SEQ... 46 5.1 1
(AC117306) Rattus norvegicus clone CH230-260G6, *** SEQUENCI... 46 5.1 1
(AC110866) Rattus norvegicus clone CH230-201B19, *** SEQUENC... 46 5.1 1
(AC105653) Rattus norvegicus chromosome 18 clone CH230-202O3... 46 5.1 1
(AC104159) Pan troglodytes clone RP43-82O21, WORKING DRAFT S... 46 5.1 1
(AC103553) Rattus norvegicus chromosome 18 clone CH230-3J7, ... 46 5.1 1
(CU928693) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 5.1 1
(CU914522) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 5.1 1
(CU914365) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 5.1 1

>(BJ424967) Dictyostelium discoideum cDNA clone:ddv54n05, 5' end,
single read.
Length = 604

Score = 1185 bits (598), Expect = 0.0
Identities = 598/598 (100%)
Strand = Plus / Plus


Query: 213 cagaagttgttaaaccaaacccagctaagccagatgaattggtaatagcatttatgtcac 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 cagaagttgttaaaccaaacccagctaagccagatgaattggtaatagcatttatgtcac 66


Query: 273 catatttcgacccagaatatacccaatacagtggtgcagcagaatatgcacttagtaaat 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 catatttcgacccagaatatacccaatacagtggtgcagcagaatatgcacttagtaaat 126


Query: 333 tcaatgaaacctttaaaaccaaatattcaaaaaccattaaattgcatacatttactgata 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tcaatgaaacctttaaaaccaaatattcaaaaaccattaaattgcatacatttactgata 186


Query: 393 caaatgatgttattgattccttggatttagtgacaatgccagtcaatggtattgttggtc 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 caaatgatgttattgattccttggatttagtgacaatgccagtcaatggtattgttggtc 246


Query: 453 cagcgtattcaggttcatcatcaactgcatgtttagtatttggagcatttgcagttccaa 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 cagcgtattcaggttcatcatcaactgcatgtttagtatttggagcatttgcagttccaa 306


Query: 513 gtataagtttttatgctacaggtgcaagtctttcaaatagtggatcctatccatatttcc 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gtataagtttttatgctacaggtgcaagtctttcaaatagtggatcctatccatatttcc 366


Query: 573 aacgtgttatgccagacgatcgtttacaagtacaagcaattctatcattattgaaaaaga 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aacgtgttatgccagacgatcgtttacaagtacaagcaattctatcattattgaaaaaga 426


Query: 633 atggttggactcgtgtttcatgtattcataccaatgaagattatggtaatgggtggtgct 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 atggttggactcgtgtttcatgtattcataccaatgaagattatggtaatgggtggtgct 486


Query: 693 gatcaattggttcaacaatcaaatgcacaaggtatcacagttaataccaatcaagctatc 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gatcaattggttcaacaatcaaatgcacaaggtatcacagttaataccaatcaagctatc 546


Query: 753 gatccagttgataatggcattgcaccagaacaactatattatgatatcgtatttgaca 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gatccagttgataatggcattgcaccagaacaactatattatgatatcgtatttgaca 604

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,962,305,228
Number of extensions: 120107509
Number of successful extensions: 11808234
Number of sequences better than 10.0: 152
Length of query: 1969
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1945
Effective length of database: 97,308,875,965
Effective search space: 189265763751925
Effective search space used: 189265763751925
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7. 1
Homology vs Protein
Query= Contig-U11939-1 (Contig-U11939-1Q) /CSM_Contig/Contig-U11939-1Q.Seq.d
(1969 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54ET0) RecName: Full=Metabotropic glutamate receptor-like prot... 360 e-157
CR405715_4(CR405715|pid:none) Zebrafish DNA sequence from clone ... 79 6e-13
BX901875_2(BX901875|pid:none) Zebrafish DNA sequence from clone ... 76 5e-12
BX901875_1(BX901875|pid:none) Zebrafish DNA sequence from clone ... 73 3e-11
BX649633_1(BX649633|pid:none) Zebrafish DNA sequence from clone ... 73 3e-11
BC151857_1(BC151857|pid:none) Danio rerio vomeronasal 2 receptor... 73 3e-11
AY853701_1(AY853701|pid:none) Cyprinid sp. EA-2004 putative pher... 73 3e-11
BX649633_2(BX649633|pid:none) Zebrafish DNA sequence from clone ... 73 3e-11
AB042753_1(AB042753|pid:none) Taeniopygia guttata mRNA for metab... 72 6e-11
BX936422_2(BX936422|pid:none) Zebrafish DNA sequence from clone ... 72 6e-11
BX649633_5(BX649633|pid:none) Zebrafish DNA sequence from clone ... 72 7e-11
BX649633_7(BX649633|pid:none) Zebrafish DNA sequence from clone ... 72 7e-11
CR405715_5(CR405715|pid:none) Zebrafish DNA sequence from clone ... 72 7e-11
AL035698_2(AL035698|pid:none) Human DNA sequence from clone RP1-... 72 1e-10
AL035698_1(AL035698|pid:none) Human DNA sequence from clone RP1-... 72 1e-10
U31215_1(U31215|pid:none) Human metabotropic glutamate receptor ... 72 1e-10
AY853704_1(AY853704|pid:none) Cyprinid sp. EA-2004 putative pher... 72 1e-10
U31216_1(U31216|pid:none) Human metabotropic glutamate receptor ... 72 1e-10
(P97772) RecName: Full=Metabotropic glutamate receptor 1; ... 72 1e-10
(P23385) RecName: Full=Metabotropic glutamate receptor 1; ... 72 1e-10
(Q9UGT0) RecName: Full=Metabotropic glutamate receptor 1; ... 72 1e-10
BX649633_6(BX649633|pid:none) Zebrafish DNA sequence from clone ... 72 1e-10
AB172892_1(AB172892|pid:none) Macaca fascicularis brain cDNA clo... 72 1e-10
BX901875_3(BX901875|pid:none) Zebrafish DNA sequence from clone ... 71 1e-10
S71376(S71376)glutamate receptor homolog - cherry salmon 71 1e-10
CR405715_7(CR405715|pid:none) Zebrafish DNA sequence from clone ... 71 1e-10
CR405715_1(CR405715|pid:none) Zebrafish DNA sequence from clone ... 70 2e-10
BX936422_1(BX936422|pid:none) Zebrafish DNA sequence from clone ... 70 3e-10
CR405715_6(CR405715|pid:none) Zebrafish DNA sequence from clone ... 70 3e-10
BX649633_3(BX649633|pid:none) Zebrafish DNA sequence from clone ... 70 4e-10
BC163066_1(BC163066|pid:none) Danio rerio vomeronasal 2 receptor... 70 4e-10
BX510959_1(BX510959|pid:none) Zebrafish DNA sequence from clone ... 69 6e-10
AE013599_668(AE013599|pid:none) Drosophila melanogaster chromoso... 68 1e-09
AJ581534_1(AJ581534|pid:none) Drosophila melanogaster mRNA for m... 68 1e-09
AB008858_1(AB008858|pid:none) Takifugu rubripes Ca02.1 gene for ... 67 2e-09
AF227201_1(AF227201|pid:none) Gallus gallus metabotropic glutama... 67 2e-09
BC096533_1(BC096533|pid:none) Mus musculus glutamate receptor, m... 67 2e-09
AK315805_1(AK315805|pid:none) Homo sapiens cDNA, FLJ96929, highl... 67 2e-09
AX657486_1(AX657486|pid:none) Sequence 69 from Patent WO03000893. 67 2e-09
(Q3UVX5) RecName: Full=Metabotropic glutamate receptor 5; ... 67 2e-09
AB065618_1(AB065618|pid:none) Homo sapiens gene for seven transm... 67 2e-09
BT068347_1(BT068347|pid:none) Zea mays full-length cDNA clone ZM... 67 2e-09
(P41594) RecName: Full=Metabotropic glutamate receptor 5; ... 67 2e-09
A42916(A42916) metabotropic glutamate receptor mGluR5 - rat &D1... 67 2e-09
AK291362_1(AK291362|pid:none) Homo sapiens cDNA FLJ75523 partial... 67 2e-09
EF089136_1(EF089136|pid:none) Danio rerio C-family odorant recep... 67 2e-09
AK136840_1(AK136840|pid:none) Mus musculus adult male diencephal... 67 2e-09
AL591866_8(AL591866|pid:none) Human DNA sequence from clone RP11... 67 2e-09
D28538_1(D28538|pid:none) Human mRNA for metabotropic glutamate ... 67 2e-09
JC2132(JC2132)metabotropic glutamate receptor 5 A - human 67 2e-09
AF227203_1(AF227203|pid:none) Gallus gallus metabotropic glutama... 67 2e-09
BX908736_3(BX908736|pid:none) Zebrafish DNA sequence from clone ... 66 5e-09
FN357426_3(FN357426|pid:none) Schistosoma mansoni genome sequenc... 65 9e-09
EU643474_24(EU643474|pid:none) Adineta vaga clone Av240_B G-prot... 65 1e-08
AK294678_1(AK294678|pid:none) Homo sapiens cDNA FLJ60249 complet... 64 2e-08
EF089139_1(EF089139|pid:none) Danio rerio T1R taste receptor (t1... 64 2e-08
AX709347_1(AX709347|pid:none) Sequence 1 from Patent WO02070708.... 64 2e-08
BC129205_1(BC129205|pid:none) Danio rerio zgc:158329, mRNA (cDNA... 64 3e-08
BX908736_6(BX908736|pid:none) Zebrafish DNA sequence from clone ... 64 3e-08
(Q9PW88) RecName: Full=G-protein coupled receptor family C group... 64 3e-08
(P31421) RecName: Full=Metabotropic glutamate receptor 2; ... 63 3e-08
AB200910_1(AB200910|pid:none) Takifugu rubripes TAS1R1 mRNA for ... 63 3e-08
JC7160(JC7160)metabotropic glutamate receptor subtype 3 precurso... 63 5e-08
(Q9QYS2) RecName: Full=Metabotropic glutamate receptor 3; ... 63 5e-08
(Q14416) RecName: Full=Metabotropic glutamate receptor 2; ... 63 5e-08
DQ417744_1(DQ417744|pid:none) Macaca fascicularis isolate 1 glut... 63 5e-08
AY255603_1(AY255603|pid:none) Mus musculus metabotropic glutamat... 63 5e-08
AK315816_1(AK315816|pid:none) Homo sapiens cDNA, FLJ79465 comple... 63 5e-08
(Q14832) RecName: Full=Metabotropic glutamate receptor 3; ... 62 6e-08
AB200899_1(AB200899|pid:none) Danio rerio TAS1R1 mRNA for taste ... 62 6e-08
(P31422) RecName: Full=Metabotropic glutamate receptor 3; ... 62 6e-08
BC041407_1(BC041407|pid:none) Homo sapiens glutamate receptor, m... 62 6e-08
AC005009_1(AC005009|pid:none) Homo sapiens BAC clone GS1-67A24 f... 62 6e-08
AX542231_1(AX542231|pid:none) Sequence 58 from Patent WO0229033. 62 6e-08
AL844192_2(AL844192|pid:none) Zebrafish DNA sequence from clone ... 62 8e-08
AB008861_1(AB008861|pid:none) Takifugu rubripes Ca13 gene for ph... 62 1e-07
AP003827_12(AP003827|pid:none) Oryza sativa Japonica Group genom... 62 1e-07
AF083081_1(AF083081|pid:none) Carassius auratus putative odorant... 61 2e-07
A48859_1(A48859|pid:none) Sequence 1 from Patent WO9606167. &L3... 60 2e-07
AP005886_11(AP005886|pid:none) Oryza sativa Japonica Group genom... 60 2e-07
BX908736_11(BX908736|pid:none) Zebrafish DNA sequence from clone... 60 2e-07
BC172277_1(BC172277|pid:none) Synthetic construct Homo sapiens c... 60 3e-07
(Q5NCH9) RecName: Full=Metabotropic glutamate receptor 6; ... 60 3e-07
(Q863I4) RecName: Full=Metabotropic glutamate receptor 6; ... 60 3e-07
(O15303) RecName: Full=Metabotropic glutamate receptor 6; ... 60 3e-07
BC152480_1(BC152480|pid:none) Mus musculus glutamate receptor, m... 60 3e-07
(P35349) RecName: Full=Metabotropic glutamate receptor 6; ... 60 3e-07
BX908736_10(BX908736|pid:none) Zebrafish DNA sequence from clone... 60 3e-07
I49142(I49142) metabotropic glutamate receptor 8 - mouse &U1725... 60 4e-07
EU432125_1(EU432125|pid:none) Homo sapiens glutamate metabotropi... 60 4e-07
BX908736_5(BX908736|pid:none) Zebrafish DNA sequence from clone ... 60 4e-07
BC051384_1(BC051384|pid:none) Mus musculus glutamate receptor, m... 60 4e-07
(P47743) RecName: Full=Metabotropic glutamate receptor 8; ... 60 4e-07
Z78418_1(Z78418|pid:none) Caenorhabditis elegans Cosmid F25D7, c... 59 5e-07
AK030224_1(AK030224|pid:none) Mus musculus adult male testis cDN... 59 5e-07
AF458052_1(AF458052|pid:none) Homo sapiens metabotropic glutamat... 59 7e-07
AF458054_1(AF458054|pid:none) Homo sapiens metabotropic glutamat... 59 7e-07
BX908401_1(BX908401|pid:none) Zebrafish DNA sequence from clone ... 59 7e-07
(P35400) RecName: Full=Metabotropic glutamate receptor 7; ... 59 7e-07
DQ417749_1(DQ417749|pid:none) Macaca fascicularis glutamate rece... 59 7e-07
A43639_1(A43639|pid:none) Sequence 3 from Patent WO9508627. &AX... 59 7e-07
A43649_1(A43649|pid:none) Sequence 13 from Patent WO9508627. &A... 59 7e-07
BC136458_1(BC136458|pid:none) Homo sapiens glutamate receptor, m... 59 7e-07
BC136459_1(BC136459|pid:none) Homo sapiens glutamate receptor, m... 59 7e-07
AK312488_1(AK312488|pid:none) Homo sapiens cDNA, FLJ92848, highl... 59 7e-07
AF458053_1(AF458053|pid:none) Homo sapiens metabotropic glutamat... 59 7e-07
AB200909_1(AB200909|pid:none) Oryzias latipes TAS1R3 mRNA for ta... 59 9e-07
AF076473_1(AF076473|pid:none) Ictalurus punctatus metabotropic g... 59 9e-07
(Q8LGN0) RecName: Full=Glutamate receptor 2.7; AltName: Full=Lig... 59 9e-07
AP005886_15(AP005886|pid:none) Oryza sativa Japonica Group genom... 58 1e-06
AF099033_1(AF099033|pid:none) Homo sapiens gamma-aminobutyric ac... 54 1e-06
AF074482_1(AF074482|pid:none) Rattus norvegicus GABA-B receptor ... 54 1e-06
AF069755_1(AF069755|pid:none) Homo sapiens orphan G protein-coup... 54 1e-06
(O88871) RecName: Full=Gamma-aminobutyric acid type B receptor s... 54 1e-06
AJ011318_1(AJ011318|pid:none) Rattus norvegicus mRNA for GABA-B ... 54 1e-06
AX023742_1(AX023742|pid:none) Sequence 3 from Patent WO0015786. 54 1e-06
AF058795_1(AF058795|pid:none) Rattus norvegicus GABA-B receptor ... 54 1e-06
(O75899) RecName: Full=Gamma-aminobutyric acid type B receptor s... 54 1e-06
BC035071_1(BC035071|pid:none) Homo sapiens gamma-aminobutyric ac... 54 1e-06
DQ891731_1(DQ891731|pid:none) Synthetic construct clone IMAGE:10... 54 1e-06
AY902166_1(AY902166|pid:none) Macaca fascicularis G protein-coup... 54 1e-06
AL844192_1(AL844192|pid:none) Zebrafish DNA sequence from clone ... 58 1e-06
BC095823_1(BC095823|pid:none) Danio rerio vomeronasal 2 receptor... 58 1e-06
(Q925D8) RecName: Full=Taste receptor type 1 member 3; AltName: ... 57 2e-06
(Q49KI5) RecName: Full=Taste receptor type 1 member 3; ... 57 2e-06
X99675_1(X99675|pid:none) D.melanogaster mRNA for metabotropic g... 57 2e-06
AY032621_1(AY032621|pid:none) Mus musculus sweet taste receptor ... 57 2e-06
AF368024_1(AF368024|pid:none) Mus musculus C57BL/6J putative swe... 57 2e-06
AK289534_1(AK289534|pid:none) Homo sapiens cDNA FLJ77746 complet... 57 2e-06
U95025_1(U95025|pid:none) Homo sapiens metabotropic glutamate re... 57 2e-06
(Q9Z0R8) RecName: Full=Taste receptor type 1 member 1; AltName: ... 57 2e-06
AP005886_9(AP005886|pid:none) Oryza sativa Japonica Group genomi... 57 2e-06
(P91685) RecName: Full=Metabotropic glutamate receptor; ... 57 2e-06
AK289524_1(AK289524|pid:none) Homo sapiens cDNA FLJ78562 complet... 57 2e-06
AY853700_1(AY853700|pid:none) Cyprinid sp. EA-2004 putative pher... 57 2e-06
AY853699_1(AY853699|pid:none) Cyprinid sp. EA-2004 putative pher... 57 2e-06
(P31423) RecName: Full=Metabotropic glutamate receptor 4; ... 57 2e-06
BX649622_1(BX649622|pid:none) Zebrafish DNA sequence from clone ... 57 2e-06
(Q68EF4) RecName: Full=Metabotropic glutamate receptor 4; ... 57 2e-06
AL844192_4(AL844192|pid:none) Zebrafish DNA sequence from clone ... 57 2e-06
U47331_1(U47331|pid:none) Rattus norvegicus metabotropic glutama... 57 2e-06
BX571831_1(BX571831|pid:none) Zebrafish DNA sequence from clone ... 57 3e-06
(Q70VB1) RecName: Full=G-protein coupled receptor family C group... 57 3e-06
EF089138_1(EF089138|pid:none) Danio rerio C-family odorant recep... 57 3e-06
AY735400_1(AY735400|pid:none) Mus musculus orphan G-protein coup... 57 3e-06
AL844192_6(AL844192|pid:none) Zebrafish DNA sequence from clone ... 57 3e-06
AY735401_1(AY735401|pid:none) Mus musculus orphan G-protein coup... 57 3e-06
AF301162_1(AF301162|pid:none) Mus musculus strain 129P3/J putati... 57 3e-06
AY853697_1(AY853697|pid:none) Cyprinid sp. EA-2004 putative pher... 57 3e-06
AY032622_1(AY032622|pid:none) Mus musculus taste receptor T1R1 m... 57 3e-06
(Q99PG6) RecName: Full=Taste receptor type 1 member 1; AltName: ... 57 3e-06
(Q8K4Z6) RecName: Full=G-protein coupled receptor family C group... 57 3e-06
BC154060_1(BC154060|pid:none) Xenopus tropicalis gamma-aminobuty... 52 4e-06
CR759901_3(CR759901|pid:none) Zebrafish DNA sequence from clone ... 56 4e-06
DQ381401_1(DQ381401|pid:none) Callithrix pygmaea G-protein coupl... 56 4e-06
EU162611_39(EU162611|pid:none) Capsella rubella clone contig46 B... 56 4e-06
AB161181_1(AB161181|pid:none) Apis mellifera AmGluRA mRNA for me... 56 4e-06
EU180847_12(EU180847|pid:none) Boechera divaricarpa clone BAC33,... 56 4e-06
AY463910_1(AY463910|pid:none) Apis mellifera metabotropic glutam... 56 4e-06
BC094173_1(BC094173|pid:none) Xenopus laevis hypothetical protei... 51 7e-06
AP003723_14(AP003723|pid:none) Oryza sativa Japonica Group genom... 55 7e-06
CR855150_1(CR855150|pid:none) Oryza sativa (indica cultivar-grou... 55 7e-06
AC126786_17(AC126786|pid:none) Medicago truncatula clone mth2-8c... 55 7e-06
AP005886_13(AP005886|pid:none) Oryza sativa Japonica Group genom... 55 9e-06
EU180847_14(EU180847|pid:none) Boechera divaricarpa clone BAC33,... 55 1e-05
AY853710_1(AY853710|pid:none) Cyprinid sp. EA-2004 putative pher... 55 1e-05
AY435127_1(AY435127|pid:none) Homo sapiens orphan G-protein coup... 54 2e-05
AF502962_1(AF502962|pid:none) Homo sapiens G protein-coupled rec... 54 2e-05
AM432418_1(AM432418|pid:none) Vitis vinifera contig VV78X031078.... 54 2e-05
AX657484_1(AX657484|pid:none) Sequence 67 from Patent WO03000893. 54 2e-05
AX702271_1(AX702271|pid:none) Sequence 31 from Patent WO02064793. 54 2e-05
(Q49HH9) RecName: Full=Taste receptor type 1 member 3; AltName: ... 54 3e-05
AK118206_1(AK118206|pid:none) Arabidopsis thaliana At1g05200 mRN... 54 3e-05
(Q8GXJ4) RecName: Full=Glutamate receptor 3.4; Short=At... 54 3e-05
AC000098_19(AC000098|pid:none) Arabidopsis thaliana chromosome 1... 54 3e-05
AP005886_5(AP005886|pid:none) Oryza sativa Japonica Group genomi... 53 4e-05
AB289804_1(AB289804|pid:none) Danio rerio Tas1R1 mRNA for taste ... 53 4e-05
AF406649_1(AF406649|pid:none) Squalus acanthias calcium polyvale... 53 4e-05
(P48442) RecName: Full=Extracellular calcium-sensing receptor; ... 53 4e-05
CU062502_2(CU062502|pid:none) Zebrafish DNA sequence from clone ... 53 4e-05
DQ381400_1(DQ381400|pid:none) Papio hamadryas G-protein coupled ... 53 5e-05
T51137(T51137)ionotropic glutamate receptor homolog GLR4 [import... 53 5e-05
(Q717C2) RecName: Full=Taste receptor type 1 member 3; AltName: ... 53 5e-05
AB065647_1(AB065647|pid:none) Homo sapiens gene for seven transm... 53 5e-05
(Q717C1) RecName: Full=Taste receptor type 1 member 3; AltName: ... 53 5e-05
DQ381398_1(DQ381398|pid:none) Pongo pygmaeus G-protein coupled r... 52 6e-05
AM455432_2(AM455432|pid:none) Vitis vinifera contig VV78X246627.... 52 6e-05
FJ755006_1(FJ755006|pid:none) Platichthys flesus extracellular c... 52 6e-05
AM471271_1(AM471271|pid:none) Vitis vinifera contig VV78X175791.... 52 8e-05
(Q9QY96) RecName: Full=Extracellular calcium-sensing receptor; ... 52 1e-04
BC168383_1(BC168383|pid:none) Synthetic construct Mus musculus c... 52 1e-04
AF128842_1(AF128842|pid:none) Mus musculus extracellular calcium... 52 1e-04
GM692541_1(GM692541|pid:none) Sequence 3 from Patent WO2008086634. 52 1e-04
FB701758_1(FB701758|pid:none) Sequence 13 from Patent WO20071216... 52 1e-04
FB701760_1(FB701760|pid:none) Sequence 15 from Patent WO20071216... 52 1e-04
CP000252_2304(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 52 1e-04
GM692539_1(GM692539|pid:none) Sequence 1 from Patent WO2008086634. 52 1e-04
AX429805_1(AX429805|pid:none) Sequence 1 from Patent EP1203761. ... 52 1e-04
(Q09630) RecName: Full=Probable metabotropic glutamate receptor ... 52 1e-04
A56715(A56715;S49341;A49419;B49419;C49419) calcium receptor (clo... 52 1e-04
AY541693_1(AY541693|pid:none) Oreochromis mossambicus extracellu... 52 1e-04
BT031099_1(BT031099|pid:none) Drosophila melanogaster IP03705 fu... 51 1e-04
AE014134_2637(AE014134|pid:none) Drosophila melanogaster chromos... 51 1e-04
(Q9SW97) RecName: Full=Glutamate receptor 3.5; AltName: Full=Lig... 51 1e-04
AM467891_3(AM467891|pid:none) Vitis vinifera contig VV78X155293.... 51 2e-04
BX936422_3(BX936422|pid:none) Zebrafish DNA sequence from clone ... 51 2e-04
AK131536_1(AK131536|pid:none) Homo sapiens cDNA FLJ16766 fis, cl... 50 2e-04
AB008862_1(AB008862|pid:none) Fugu rubripes Ca15.1 gene for pher... 50 2e-04
(Q9C5V5) RecName: Full=Glutamate receptor 2.8; AltName: Full=Lig... 50 2e-04
FJ803674_1(FJ803674|pid:none) Drosophila americana strain DI05.0... 50 2e-04
BX908386_1(BX908386|pid:none) Zebrafish DNA sequence from clone ... 50 2e-04
AJ311495_1(AJ311495|pid:none) Arabidopsis thaliana mRNA for liga... 50 2e-04
AF170494_1(AF170494|pid:none) Arabidopsis thaliana ionotropic gl... 50 3e-04
AC005315_17(AC005315|pid:none) Arabidopsis thaliana chromosome 2... 50 3e-04
EU643474_7(EU643474|pid:none) Adineta vaga clone Av240_B G-prote... 50 3e-04
(Q9LFN5) RecName: Full=Glutamate receptor 2.5; AltName: Full=Lig... 50 3e-04
AB065467_1(AB065467|pid:none) Homo sapiens gene for seven transm... 50 3e-04
(Q84W41) RecName: Full=Glutamate receptor 3.6; AltName: Full=Lig... 50 4e-04
AC005700_8(AC005700|pid:none) Arabidopsis thaliana chromosome 2 ... 50 4e-04
AB107132_1(AB107132|pid:none) Taeniopygia guttata mGluR3 mRNA fo... 50 4e-04
AL133452_12(AL133452|pid:none) Arabidopsis thaliana DNA chromoso... 50 4e-04
AB008857_1(AB008857|pid:none) Takifugu rubripes gene for calcium... 50 4e-04
CR759901_4(CR759901|pid:none) Zebrafish DNA sequence from clone ... 49 7e-04
AC006791_2(AC006791|pid:none) Caenorhabditis elegans cosmid Y4C6... 49 7e-04
(Q9C8E7) RecName: Full=Glutamate receptor 3.3; AltName: Full=Lig... 49 7e-04
AC006791_1(AC006791|pid:none) Caenorhabditis elegans cosmid Y4C6... 49 7e-04
AC006791_4(AC006791|pid:none) Caenorhabditis elegans cosmid Y4C6... 49 7e-04
AK293949_1(AK293949|pid:none) Homo sapiens cDNA FLJ55961 complet... 49 7e-04
AC006791_3(AC006791|pid:none) Caenorhabditis elegans cosmid Y4C6... 49 7e-04
(O04660) RecName: Full=Glutamate receptor 2.1; AltName: Full=Lig... 49 9e-04
CP001322_4357(CP001322|pid:none) Desulfatibacillum alkenivorans ... 48 0.001
AL360314_10(AL360314|pid:none) Arabidopsis thaliana DNA chromoso... 48 0.001
AK293913_1(AK293913|pid:none) Homo sapiens cDNA FLJ56634 complet... 48 0.001
CU458896_2603(CU458896|pid:none) Mycobacterium abscessus chromos... 48 0.002
AF210701_1(AF210701|pid:none) Arabidopsis thaliana Glr5 mRNA, co... 48 0.002
F84732(F84732)probable ligand-gated ion channel subunit [importe... 48 0.002
AY245445_1(AY245445|pid:none) Salmo salar calcium polyvalent cat... 47 0.002
AF007271_16(AF007271|pid:none) Arabidopsis thaliana BAC TM021B04... 47 0.002
AY245444_1(AY245444|pid:none) Salmo salar calcium polyvalent cat... 47 0.002
AB107134_1(AB107134|pid:none) Taeniopygia guttata mGluR8 mRNA fo... 47 0.002
AC006761_5(AC006761|pid:none) Caenorhabditis elegans cosmid Y41G... 47 0.002
EU729334_1(EU729334|pid:none) Caenorhabditis elegans GABAB1 rece... 47 0.002
AB172729_1(AB172729|pid:none) Macaca fascicularis brain cDNA clo... 42 0.002
EF432572_1(EF432572|pid:none) Malus hupehensis glutamate recepto... 47 0.003
(Q9SHV1) RecName: Full=Glutamate receptor 2.2; AltName: Full=Lig... 47 0.003
AY125819_1(AY125819|pid:none) Bactrocera dorsalis guanylyl cycla... 47 0.003
(Q9LFN8) RecName: Full=Glutamate receptor 2.6; AltName: Full=Lig... 47 0.003
AP005686_16(AP005686|pid:none) Oryza sativa Japonica Group genom... 47 0.003
AX657488_1(AX657488|pid:none) Sequence 71 from Patent WO03000893. 46 0.004
(Q9SHV2) RecName: Full=Glutamate receptor 2.3; AltName: Full=Lig... 46 0.004
CP000828_4216(CP000828|pid:none) Acaryochloris marina MBIC11017,... 46 0.006
(Q54SW3) RecName: Full=Metabotropic glutamate receptor-like prot... 45 0.013
AP005535_9(AP005535|pid:none) Oryza sativa Japonica Group genomi... 45 0.013
AB042755_1(AB042755|pid:none) Taeniopygia guttata mRNA for metab... 44 0.017
CP001197_2584(CP001197|pid:none) Desulfovibrio vulgaris str. 'Mi... 44 0.017
AL022604_15(AL022604|pid:none) Arabidopsis thaliana DNA chromoso... 44 0.022
AY059778_1(AY059778|pid:none) Arabidopsis thaliana unknown prote... 44 0.022
AB200906_1(AB200906|pid:none) Oryzias latipes TAS1R2a mRNA for t... 44 0.022
AP006618_1881(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 44 0.022
AB042754_1(AB042754|pid:none) Taeniopygia guttata mRNA for metab... 44 0.028
(Q54QG7) RecName: Full=Metabotropic glutamate receptor-like prot... 44 0.028
AY118394_1(AY118394|pid:none) Drosophila melanogaster RE52162 fu... 44 0.028
CP000088_1184(CP000088|pid:none) Thermobifida fusca YX, complete... 43 0.037
(P51842) RecName: Full=Retinal guanylyl cyclase 2; Shor... 43 0.037
CP000362_2447(CP000362|pid:none) Roseobacter denitrificans OCh 1... 43 0.037
AB289806_1(AB289806|pid:none) Danio rerio Tas1R2b mRNA for taste... 43 0.037
AP008231_2233(AP008231|pid:none) Synechococcus elongatus PCC 630... 43 0.037
AB200908_1(AB200908|pid:none) Oryzias latipes TAS1R2c mRNA for t... 43 0.037
AB113361_1(AB113361|pid:none) Xenopus laevis xV2R1 mRNA for puta... 43 0.048
CP000112_612(CP000112|pid:none) Desulfovibrio desulfuricans G20,... 43 0.048
AB009035_1(AB009035|pid:none) Fugu rubripes Ca05 gene for pherom... 43 0.048
CP000377_1272(CP000377|pid:none) Silicibacter sp. TM1040, comple... 42 0.063
AP010904_1139(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 42 0.063
A84550(A84550) probable ligand-gated ion channel protein [import... 42 0.082
CP000089_270(CP000089|pid:none) Dechloromonas aromatica RCB, com... 42 0.082
AB477969_1(AB477969|pid:none) Lehmannia valentiana GABAbR mRNA f... 42 0.082
AY495448_1(AY495448|pid:none) Arabidopsis thaliana clone AtGLR3.... 42 0.082
AF038557_1(AF038557|pid:none) Arabidopsis thaliana ligand gated ... 42 0.082
AF079999_1(AF079999|pid:none) Arabidopsis thaliana putative glut... 42 0.082
AY118669_1(AY118669|pid:none) Drosophila melanogaster AT01906 fu... 42 0.082
AF318274_1(AF318274|pid:none) Drosophila melanogaster putative m... 42 0.082
AE014134_148(AE014134|pid:none) Drosophila melanogaster chromoso... 42 0.082
(Q7XJL2) RecName: Full=Glutamate receptor 3.1; Short=At... 42 0.082
AM502237_48(AM502237|pid:none) Leishmania infantum chromosome 19. 42 0.082
AE014134_147(AE014134|pid:none) Drosophila melanogaster chromoso... 42 0.082
AB009033_1(AB009033|pid:none) Fugu rubripes Ca03 gene for pherom... 42 0.11
AF011416_1(AF011416|pid:none) Mus musculus putative pheromone re... 42 0.11
CT005258_64(CT005258|pid:none) Leishmania major strain Friedlin,... 41 0.14
CP001213_124(CP001213|pid:none) Bifidobacterium animalis subsp. ... 41 0.14
BT029119_1(BT029119|pid:none) Drosophila melanogaster IP15483 fu... 41 0.18
AE017285_545(AE017285|pid:none) Desulfovibrio vulgaris subsp. vu... 41 0.18
CP000660_1442(CP000660|pid:none) Pyrobaculum arsenaticum DSM 135... 41 0.18
AL031387_4(AL031387|pid:none) Human DNA sequence from clone RP4-... 41 0.18
AX647271_1(AX647271|pid:none) Sequence 1463 from Patent EP1270724. 41 0.18
BX640417_113(BX640417|pid:none) Bordetella pertussis strain Toha... 40 0.24
CP000561_811(CP000561|pid:none) Pyrobaculum calidifontis JCM 115... 40 0.24
AP010904_1140(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 40 0.24
CP000884_4315(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 40 0.24
AB376014_1(AB376014|pid:none) Tanakia lanceolata V2R gene for vo... 40 0.31
AF016184_1(AF016184|pid:none) Rattus norvegicus putative pheromo... 40 0.31
BA000043_3026(BA000043|pid:none) Geobacillus kaustophilus HTA426... 40 0.31
BX640431_246(BX640431|pid:none) Bordetella parapertussis strain ... 40 0.31
CP000264_2165(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 40 0.31
CP000577_1558(CP000577|pid:none) Rhodobacter sphaeroides ATCC 17... 40 0.41
CP000143_1516(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c... 40 0.41
AB009036_1(AB009036|pid:none) Fugu rubripes Ca06 gene for pherom... 40 0.41
AF011414_1(AF011414|pid:none) Mus musculus putative pheromone re... 40 0.41
CP000875_2311(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 40 0.41
AF016180_1(AF016180|pid:none) Rattus norvegicus putative pheromo... 40 0.41
BA000022_2508(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 40 0.41
BA000039_792(BA000039|pid:none) Thermosynechococcus elongatus BP... 40 0.41
AE009441_1442(AE009441|pid:none) Pyrobaculum aerophilum str. IM2... 39 0.53
AK135761_1(AK135761|pid:none) Mus musculus in vitro fertilized e... 39 0.53
CP001287_3076(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 39 0.53
AF011417_1(AF011417|pid:none) Mus musculus putative pheromone re... 39 0.53
CP000480_3135(CP000480|pid:none) Mycobacterium smegmatis str. MC... 39 0.53
CP000951_2163(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 39 0.70
AB009044_1(AB009044|pid:none) Takifugu rubripes Ca15 gene for ph... 39 0.70
CP001096_1530(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 39 0.70
AY426342_1(AY426342|pid:none) Mus musculus putative pheromone re... 39 0.70
AP008955_1674(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 39 0.70
AE013599_3827(AE013599|pid:none) Drosophila melanogaster chromos... 39 0.91
AM711867_2594(AM711867|pid:none) Clavibacter michiganensis subsp... 39 0.91
BT029428_1(BT029428|pid:none) Drosophila melanogaster IP09654 fu... 39 0.91
AL935148_10(AL935148|pid:none) Zebrafish DNA sequence from clone... 39 0.91
CP001014_1765(CP001014|pid:none) Thermoproteus neutrophilus V24S... 39 0.91
AB200900_1(AB200900|pid:none) Danio rerio TAS1R2a mRNA for taste... 39 0.91
AB009034_1(AB009034|pid:none) Fugu rubripes Ca04 gene for pherom... 39 0.91
AP008957_3327(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 38 1.2
AB009037_1(AB009037|pid:none) Fugu rubripes Ca07 gene for pherom... 38 1.2
AF016185_1(AF016185|pid:none) Rattus norvegicus putative pheromo... 38 1.2
CP000930_1056(CP000930|pid:none) Heliobacterium modesticaldum Ic... 38 1.2
AF109392_1(AF109392|pid:none) Brassica napus ligand gated channe... 38 1.2
AD2035(AD2035) hypothetical protein alr1834 [imported] - Nostoc ... 38 1.6
CP001344_1158(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 38 1.6
AM910993_301(AM910993|pid:none) Plasmodium knowlesi strain H chr... 38 1.6
(O02740) RecName: Full=Retinal guanylyl cyclase 2; Shor... 38 1.6
AF083086_1(AF083086|pid:none) Carassius auratus putative odorant... 38 1.6
CP000117_4764(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 38 1.6
AP009256_74(AP009256|pid:none) Bifidobacterium adolescentis ATCC... 37 2.0
AC002081_1(AC002081|pid:none) Homo sapiens BAC clone CTA-331C24 ... 37 2.0
CP001087_4801(CP001087|pid:none) Desulfobacterium autotrophicum ... 37 2.0
CP000431_987(CP000431|pid:none) Rhodococcus jostii RHA1, complet... 37 2.0
AM269981_16(AM269981|pid:none) Aspergillus niger contig An01c034... 37 2.0
AB376018_1(AB376018|pid:none) Tanakia lanceolata V2R gene for vo... 37 2.0
AP011115_724(AP011115|pid:none) Rhodococcus opacus B4 DNA, compl... 37 2.0
AF318273_1(AF318273|pid:none) Drosophila melanogaster metabotrop... 37 2.0
AM436142_2(AM436142|pid:none) Vitis vinifera contig VV78X056855.... 37 2.0
AE014297_3160(AE014297|pid:none) Drosophila melanogaster chromos... 37 2.0
AF083085_1(AF083085|pid:none) Carassius auratus putative odorant... 37 2.7
AF016178_1(AF016178|pid:none) Rattus norvegicus putative pheromo... 37 2.7
(Q55AP1) RecName: Full=Metabotropic glutamate receptor-like prot... 37 2.7
AF249885_1(AF249885|pid:none) Ovis aries metabotropic glutamate ... 37 2.7
CP001614_2327(CP001614|pid:none) Teredinibacter turnerae T7901, ... 37 2.7
CP000239_2490(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 37 2.7
CP001338_2337(CP001338|pid:none) Candidatus Methanosphaerula pal... 37 2.7
CR954253_865(CR954253|pid:none) Lactobacillus delbrueckii subsp.... 37 2.7
AB125673_1(AB125673|pid:none) Xenopus laevis xV2R E-1 mRNA for v... 37 3.5
DQ327725_1(DQ327725|pid:none) Homo sapiens calcium sensing recep... 37 3.5
AF083087_1(AF083087|pid:none) Carassius auratus putative odorant... 37 3.5
AB009038_1(AB009038|pid:none) Fugu rubripes Ca08 gene for pherom... 37 3.5
AE009441_2369(AE009441|pid:none) Pyrobaculum aerophilum str. IM2... 35 4.5
AM778949_39(AM778949|pid:none) Microcystis aeruginosa PCC 7806 g... 36 4.5
CP000316_148(CP000316|pid:none) Polaromonas sp. JS666, complete ... 36 4.5
AB376016_1(AB376016|pid:none) Tanakia lanceolata V2R gene for vo... 36 4.5
AB376034_1(AB376034|pid:none) Tanakia lanceolata V2R gene for vo... 36 4.5
AP009552_3247(AP009552|pid:none) Microcystis aeruginosa NIES-843... 36 4.5
AB289805_1(AB289805|pid:none) Danio rerio Tas1R2a mRNA for taste... 36 4.5
AM920412_1(AM920412|pid:none) Thermoproteus tenax ilvK gene for ... 36 4.5
AY853970_1(AY853970|pid:none) Rana catesbeiana GABA-B receptor R... 36 4.5
AL078470_12(AL078470|pid:none) Arabidopsis thaliana DNA chromoso... 36 5.9
AY773959_1(AY773959|pid:none) Danio rerio type 2 vomeronasal rec... 36 5.9
CP000254_2575(CP000254|pid:none) Methanospirillum hungatei JF-1,... 36 5.9
AB376021_1(AB376021|pid:none) Tanakia lanceolata V2R gene for vo... 35 7.7
AB376036_1(AB376036|pid:none) Tanakia lanceolata V2R gene for vo... 35 7.7
AM167904_1899(AM167904|pid:none) Bordetella avium 197N complete ... 35 7.7
AM412317_452(AM412317|pid:none) Clostridium botulinum A str. ATC... 35 7.7
CP001083_460(CP001083|pid:none) Clostridium botulinum Ba4 str. 6... 35 7.7
AB376023_1(AB376023|pid:none) Tanakia lanceolata V2R gene for vo... 35 7.7
CP000412_724(CP000412|pid:none) Lactobacillus delbrueckii subsp.... 35 7.7
AM494956_96(AM494956|pid:none) Leishmania braziliensis chromosom... 35 7.7
CP001581_467(CP001581|pid:none) Clostridium botulinum A2 str. Ky... 35 7.7
AE013599_671(AE013599|pid:none) Drosophila melanogaster chromoso... 31 9.1

>(Q54ET0) RecName: Full=Metabotropic glutamate receptor-like protein
E; AltName: Full=GABA-B receptor-like protein grlE;
AltName: Full=DdmGluPR; Flags: Precursor;
&DQ447637_1(DQ447637|pid:none)
Length = 816

Score = 360 bits (924), Expect(2) = e-157
Identities = 179/179 (100%), Positives = 179/179 (100%)
Frame = +2

Query: 149 GNILKNVVILVIFSLFISKINSEVVKPNPAKPDELVIAFMSPYFDPEYTQYSGAAEYALS 328
GNILKNVVILVIFSLFISKINSEVVKPNPAKPDELVIAFMSPYFDPEYTQYSGAAEYALS
Sbjct: 6 GNILKNVVILVIFSLFISKINSEVVKPNPAKPDELVIAFMSPYFDPEYTQYSGAAEYALS 65

Query: 329 KFNETFKTKYSKTIKLHTFTDTNDVIDSLDLVTMPVNGIVGPAYSGSSSTACLVFGAFAV 508
KFNETFKTKYSKTIKLHTFTDTNDVIDSLDLVTMPVNGIVGPAYSGSSSTACLVFGAFAV
Sbjct: 66 KFNETFKTKYSKTIKLHTFTDTNDVIDSLDLVTMPVNGIVGPAYSGSSSTACLVFGAFAV 125

Query: 509 PSISFYATGASLSNSGSYPYFQRVMPDDRLQVQAILSLLKKNGWTRVSCIHTNEDYGNG 685
PSISFYATGASLSNSGSYPYFQRVMPDDRLQVQAILSLLKKNGWTRVSCIHTNEDYGNG
Sbjct: 126 PSISFYATGASLSNSGSYPYFQRVMPDDRLQVQAILSLLKKNGWTRVSCIHTNEDYGNG 184

Score = 220 bits (560), Expect(2) = e-157
Identities = 118/155 (76%), Positives = 118/155 (76%), Gaps = 36/155 (23%)
Frame = +3

Query: 684 GGADQLVQQSNAQGITVNTNQAIDPVDNGIAPEQLYYDIVFDNLEAAKSRVIVLYALFP- 860
GGADQLVQQSNAQGITVNTNQAIDPVDNGIAPEQLYYDIVFDNLEAAKSRVIVLYALFP
Sbjct: 184 GGADQLVQQSNAQGITVNTNQAIDPVDNGIAPEQLYYDIVFDNLEAAKSRVIVLYALFPP 243

Query: 861 -----------------------------------PDLLGVLATFPSYGLGTEAYTDFER 935
PDLLGVLATFPSYGLGTEAYTDFER
Sbjct: 244 DCLEIWKQAKARGFLGEGFTWIVTDGCAELTGGTDPDLLGVLATFPSYGLGTEAYTDFER 303

Query: 936 TIVNDYNNNTGDAFYXGASFSYDATYAMLMGIEAV 1040
TIVNDYNNNTGDAFY GASFSYDATYAMLMGIEAV
Sbjct: 304 TIVNDYNNNTGDAFYKGASFSYDATYAMLMGIEAV 338

Score = 258 bits (659), Expect(2) = e-128
Identities = 131/142 (92%), Positives = 131/142 (92%)
Frame = +2

Query: 1388 AIALGFILRDNPXXXXXXXXXXXLLGFTVTVSVLFLPKVWMILSGQQHSMDSIGTSMDSM 1567
AIALGFILRDNP LLGFTVTVSVLFLPKVWMILSGQQHSMDSIGTSMDSM
Sbjct: 640 AIALGFILRDNPIAIIVIQTIAILLGFTVTVSVLFLPKVWMILSGQQHSMDSIGTSMDSM 699

Query: 1568 GRSNGNTTEAESTRGYTNKDYNNQSVGRSFSAHATGFKDVAPSNHPQLGIVYTGGDNFPR 1747
GRSNGNTTEAESTRGYTNKDYNNQSVGRSFSAHATGFKDVAPSNHPQLGIVYTGGDNFPR
Sbjct: 700 GRSNGNTTEAESTRGYTNKDYNNQSVGRSFSAHATGFKDVAPSNHPQLGIVYTGGDNFPR 759

Query: 1748 VGSSQTAASRSEAEINVSKDVL 1813
VGSSQTAASRSEAEINVSKDVL
Sbjct: 760 VGSSQTAASRSEAEINVSKDVL 781

Score = 225 bits (574), Expect(2) = e-128
Identities = 113/121 (93%), Positives = 114/121 (94%)
Frame = +1

Query: 1051 SNARKFKIIRITNKFIITLVGGFVLLESIFMIIWTAVDRPIPLAEPIFKAGEAQLQCTSD 1230
SNARKFKIIRITNKFIITLVGGFVLLESIFMIIWTAVDRPIPLAEPIFKAGEAQLQCTSD
Sbjct: 528 SNARKFKIIRITNKFIITLVGGFVLLESIFMIIWTAVDRPIPLAEPIFKAGEAQLQCTSD 587

Query: 1231 SEAWWYVFVFYKVFYILFGVFLAFKTRNVVDSLNESKPITLALYNLTFVMVVCNCTWFYF 1410
SEAWWYVFVFYKVFYILFGVFLAFKTRNVVDSLNESKPITLALYNLTFVMVV F
Sbjct: 588 SEAWWYVFVFYKVFYILFGVFLAFKTRNVVDSLNESKPITLALYNLTFVMVVAIALGFIL 647

Query: 1411 K 1413
+
Sbjct: 648 R 648

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,927,387,141
Number of extensions: 55537434
Number of successful extensions: 157174
Number of sequences better than 10.0: 383
Number of HSP's gapped: 156986
Number of HSP's successfully gapped: 472
Length of query: 656
Length of database: 1,051,180,864
Length adjustment: 135
Effective length of query: 521
Effective length of database: 614,245,399
Effective search space: 320021852879
Effective search space used: 320021852879
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.93 gvh: 0.48 alm: 0.24 top: 0.30 tms: 0.33 mit: 0.30 mip: 0.02
nuc: 0.00 erl: 0.00 erm: 0.40 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 1.00 m3b: 0.00 m_ : 0.00

44.0 %: endoplasmic reticulum
20.0 %: plasma membrane
12.0 %: mitochondrial
8.0 %: extracellular, including cell wall
4.0 %: cytoplasmic
4.0 %: cytoskeletal
4.0 %: vesicles of secretory system
4.0 %: nuclear

>> prediction for Contig-U11939-1 is end

VS (DIR, S) 1
VH (FL, L) 25
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 2
SF (FL, S) 0
CH (FL, L) 2
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0