Contig-U11922-1
Contig ID Contig-U11922-1
Contig update 2002.12.18
Contig sequence
>Contig-U11922-1 (Contig-U11922-1Q) /CSM_Contig/Contig-U11922-1Q.Seq.d
AATAAATATGGTGTTGGTTATTTATTAACTTGTAGTAAATCTTTGAATAC
CATTGATCAATTCAATGTTGATCAAGTTACTCAATTCATAAGAGATCAAA
TACCTGATGTAACTGTACTTTCAAATGCAGGTTCAGAAATTTCATTTAGA
TTACCAACTGCTTCATTACCTGTATTTTCAAAATTCTTTAAAGATTTTGA
TGAGAATTTATCAAATTTTCATATTGATTCCTATGGTATTAGTGTAACCA
CTTTGGAAGAGGTTTTCTTGAAAATCGGTACAGATATCGATACTGATGCG
CTTTCAATTGCAGATGGTAATGGCAATGATGATGAATTAAAAAGATCAAT
TGGAGTTTCATCAACTGGTATAAAATCAAAGCAACAATTAAAAGCATTAT
TAATTAAACGTGTTAAAACATCTTCAAAAGATTTTAAAGCATTTTTATTA
TCATTACTATTACCATTACTAGTTATAATTGGATCAATTATAGTTTTCAA
AGAAGTTGATAATGAGGTTATATTTTATAATAATTCAACAGAACCTTTAA
CATTTTCATTACTTCAACAGTATGGTAAAAATGATATCGTACCAATTCAA
TTGGCTGGCACAACTTCAGAATTTGATTTCAATAAATTCTTATCAAATTC
ACCATACTTTAATCAATTTCAGTATTTAAATAACTCAATTAACTTTAATC
AATATTTAATTAATAATTATAAACAATCATCAGGTTCAATTAATTTCACA
ATACCATTATCATCATCATTAATTAATAATACAACTAAAGTAATATCATA
TAATTCATTATTTAATTTTAATTATATTCATTCTTGGCCAGTTCATGTAA
ATTTAATAAATGATGCTCTATTAAGAAATCATAATGGTATAGGTATAGAA
TGTACTTCTTTACCATTTGATCATATATTAACAAGTTTTCAAAAGGCAAG
TCAAGGTATGAATATTCAATCAATTGTTTATTTCATTGTAATTATGATGG
CTGGATTTTCATTGATGGCAGGTTCTTTTGCTGGTAGTATCTCTCAAGAG
CGTACAAATAGAATTAA----------NNNNNNNNNNACCNGTTAGTATG
CTAGCTGGTGATATTCTACCAACAAGTGGTCAAATAACTATCAATGGTCA
TGATTTAGTAACCGATAGAGCTCAAGCTTTACGTGGTGTTTCTGTATGTC
CACAATTTGATGCATTAATAACATTATTAACTGCTCGTGAACAGTTATCT
CTATATTGTGCAATCAAAGGTGTACCAGATGATAAAATATCACTAGTAGT
TGAAGCATTCATTAAAATGATGGATCTTGGTAAAATTGCAAATTCAAATA
CTGGTGGTTATTCAGGTGGTAATAAAAGAAAAGTTTCATTATCAATTGCA
ATGCTTGGTAATCCATCAGTAGTTTTAATCGATGAAGCATCATCAGGTTG
TGATCCAATCATTAGATACCGTCAATGTCAAGTAATTAGTGAATTGGGTA
AAAATAAAGTCATCATTTTAACTTCTCATTCAATGTCTGAAATTCAAGCA
TTATGTTCAAGAATGACAATTATGAGAGATGGTCAATTCAAATGTTTAGG
ATCAACTCAACATATTAAATCTAAATTTGGAGCAGGGTATTCAGTTGAAG
TTAAATTTAAAAAGAGTTGTTTAGAAGTTGGTATTCCACAAAGTCTTCAT
TAGAACAAGTATTTTTAAAATTAACTGGTGCAACTCATGAAGATCGTTTA
AATTTAAATAACCAACAACAACAACAACAAACAATTCCAAATTCCGTATT
AAATA

Gap gap included
Contig length 1795
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 4141008
End point 4139223
Strand (PLUS/MINUS) MINUS
Number of clones 3
Number of EST 4
Link to clone list U11922
List of clone(s)

est1=SHG432F,1,593
est2=AHO274F,265,870
est3=CHQ335F,554,1067
est4=CHQ335Z,1068,1786
Translated Amino Acid sequence
NKYGVGYLLTCSKSLNTIDQFNVDQVTQFIRDQIPDVTVLSNAGSEISFRLPTASLPVFS
KFFKDFDENLSNFHIDSYGISVTTLEEVFLKIGTDIDTDALSIADGNGNDDELKRSIGVS
STGIKSKQQLKALLIKRVKTSSKDFKAFLLSLLLPLLVIIGSIIVFKEVDNEVIFYNNST
EPLTFSLLQQYGKNDIVPIQLAGTTSEFDFNKFLSNSPYFNQFQYLNNSINFNQYLINNY
KQSSGSINFTIPLSSSLINNTTKVISYNSLFNFNYIHSWPVHVNLINDALLRNHNGIGIE
CTSLPFDHILTSFQKASQGMNIQSIVYFIVIMMAGFSLMAGSFAGSISQERTNRI---

---XXXPVSMLAGDILPTSGQITINGHDLVTDRAQALRGVSVCPQFDALITLLTAREQLS
LYCAIKGVPDDKISLVVEAFIKMMDLGKIANSNTGGYSGGNKRKVSLSIAMLGNPSVVLI
DEASSGCDPIIRYRQCQVISELGKNKVIILTSHSMSEIQALCSRMTIMRDGQFKCLGSTQ
HIKSKFGAGYSVEVKFKKSCLEVGIPQSLH*nkyf*n*lvqlmkiv*i*itnnnnnkqfq
ipy*i


Translated Amino Acid sequence (All Frames)
Frame A:
NKYGVGYLLTCSKSLNTIDQFNVDQVTQFIRDQIPDVTVLSNAGSEISFRLPTASLPVFS
KFFKDFDENLSNFHIDSYGISVTTLEEVFLKIGTDIDTDALSIADGNGNDDELKRSIGVS
STGIKSKQQLKALLIKRVKTSSKDFKAFLLSLLLPLLVIIGSIIVFKEVDNEVIFYNNST
EPLTFSLLQQYGKNDIVPIQLAGTTSEFDFNKFLSNSPYFNQFQYLNNSINFNQYLINNY
KQSSGSINFTIPLSSSLINNTTKVISYNSLFNFNYIHSWPVHVNLINDALLRNHNGIGIE
CTSLPFDHILTSFQKASQGMNIQSIVYFIVIMMAGFSLMAGSFAGSISQERTNRI---

---xxxxxlvc*lvifyqqvvk*lsmvmi**pielklyvvflyvhnlmh**hy*llvnsy
lyivqskvyqmikyh**lkhslk*wilvklqiqilvviqvvikekfhyqlqclvihq*f*
smkhhqvviqsldtvnvk*lvnwvkikssf*lliqclkfkhyvqe*ql*emvnsnv*dql
nilnlnleqgiqlklnlkrvv*klvfhkvfirtsifkinwcns*rsfkfk*ptttttnns
kfrik

Frame B:
inmvlviy*lvvnl*iplinsmlikllns*eikylm*lyfqmqvqkfhldyqllhylyfq
nslkilmriyqifilipmvlv*plwkrfs*ksvqisilmrfqlqmvmammmn*kdqlefh
qlv*nqsnn*khy*lnvlkhlqkilkhfyyhyyyhy*l*ldql*fskklimrlyfiiiqq
nl*hfhyfnsmvkmisyqfnwlaqlqnlisinsyqihhtlinfsi*itqltlini*liii
nnhqvqlisqyhyhhh*liiqlk*yhiihyliliifilgqfm*i**mmly*eiimv*v*n
vllyhliiy*qvfkrqvkv*ifnqlfisl*l*wldfh*wqvlllvvslksvqiel---

---xxxtx*yasw*ystnkwsnnyqws*fsnr*sssftwcfcmsti*cinniincs*tvi
silcnqrctr**nitss*sih*ndgsw*nckfkywwlfrw**kksfiincnaw*sissfn
r*siirl*snh*ipsmssn**ig*k*shhfnfsfnv*nssimfkndnyerwsiqmfrins
ty*i*iwsrvfs*s*i*kelfrswystkssleqvflkltgathedrlnlnnqqqqqqtip
nsvln

Frame C:
*iwcwlfinl**ifeyh*siqc*ssysihkrsnt*cnctfkcrfrnfi*itncfitcifk
il*rf**efikfsy*flwy*cnhfgrgflenryryry*cafncrw*wq***ikkinwsfi
nwykikatiksiin*tc*nifkrf*sifiiitititsynwinysfqrs***gyil**fnr
tfnifitstvw*k*yrtnsigwhnfri*fq*ilikftil*sisvfk*ln*l*sifn**l*
tiirfn*fhntiiiiin**yn*snii*fii*f*lysflassckfnk*csikks*wyryrm
yffti*syinkfskgksryeysinclfhcnydgwifidgrffcw*ylsrayk*n*---

---XXXPVSMLAGDILPTSGQITINGHDLVTDRAQALRGVSVCPQFDALITLLTAREQLS
LYCAIKGVPDDKISLVVEAFIKMMDLGKIANSNTGGYSGGNKRKVSLSIAMLGNPSVVLI
DEASSGCDPIIRYRQCQVISELGKNKVIILTSHSMSEIQALCSRMTIMRDGQFKCLGSTQ
HIKSKFGAGYSVEVKFKKSCLEVGIPQSLH*nkyf*n*lvqlmkiv*i*itnnnnnkqfq
ipy*i

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11922-1 (Contig-U11922-1Q)
/CSM_Contig/Contig-U11922-1Q.Seq.d
(1805 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11922-1 (Contig-U11922-1Q) /CSM_Contig/Conti... 2115 0.0
Contig-U12817-1 (Contig-U12817-1Q) /CSM_Contig/Conti... 1205 0.0
Contig-U13805-1 (Contig-U13805-1Q) /CSM_Contig/Conti... 62 2e-09
Contig-U11759-1 (Contig-U11759-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U14675-1 (Contig-U14675-1Q) /CSM_Contig/Conti... 44 5e-04
Contig-U12038-1 (Contig-U12038-1Q) /CSM_Contig/Conti... 44 5e-04
Contig-U11132-1 (Contig-U11132-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U07966-1 (Contig-U07966-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U07546-1 (Contig-U07546-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U14704-1 (Contig-U14704-1Q) /CSM_Contig/Conti... 40 0.008

>Contig-U11922-1 (Contig-U11922-1Q) /CSM_Contig/Contig-U11922-1Q.Seq.d
Length = 1805

Score = 2115 bits (1067), Expect = 0.0
Identities = 1067/1067 (100%)
Strand = Plus / Plus


Query: 1 aataaatatggtgttggttatttattaacttgtagtaaatctttgaataccattgatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aataaatatggtgttggttatttattaacttgtagtaaatctttgaataccattgatcaa 60


Query: 61 ttcaatgttgatcaagttactcaattcataagagatcaaatacctgatgtaactgtactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcaatgttgatcaagttactcaattcataagagatcaaatacctgatgtaactgtactt 120


Query: 121 tcaaatgcaggttcagaaatttcatttagattaccaactgcttcattacctgtattttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaaatgcaggttcagaaatttcatttagattaccaactgcttcattacctgtattttca 180


Query: 181 aaattctttaaagattttgatgagaatttatcaaattttcatattgattcctatggtatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaattctttaaagattttgatgagaatttatcaaattttcatattgattcctatggtatt 240


Query: 241 agtgtaaccactttggaagaggttttcttgaaaatcggtacagatatcgatactgatgcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtgtaaccactttggaagaggttttcttgaaaatcggtacagatatcgatactgatgcg 300


Query: 301 ctttcaattgcagatggtaatggcaatgatgatgaattaaaaagatcaattggagtttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctttcaattgcagatggtaatggcaatgatgatgaattaaaaagatcaattggagtttca 360


Query: 361 tcaactggtataaaatcaaagcaacaattaaaagcattattaattaaacgtgttaaaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcaactggtataaaatcaaagcaacaattaaaagcattattaattaaacgtgttaaaaca 420


Query: 421 tcttcaaaagattttaaagcatttttattatcattactattaccattactagttataatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcttcaaaagattttaaagcatttttattatcattactattaccattactagttataatt 480


Query: 481 ggatcaattatagttttcaaagaagttgataatgaggttatattttataataattcaaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggatcaattatagttttcaaagaagttgataatgaggttatattttataataattcaaca 540


Query: 541 gaacctttaacattttcattacttcaacagtatggtaaaaatgatatcgtaccaattcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaacctttaacattttcattacttcaacagtatggtaaaaatgatatcgtaccaattcaa 600


Query: 601 ttggctggcacaacttcagaatttgatttcaataaattcttatcaaattcaccatacttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttggctggcacaacttcagaatttgatttcaataaattcttatcaaattcaccatacttt 660


Query: 661 aatcaatttcagtatttaaataactcaattaactttaatcaatatttaattaataattat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aatcaatttcagtatttaaataactcaattaactttaatcaatatttaattaataattat 720


Query: 721 aaacaatcatcaggttcaattaatttcacaataccattatcatcatcattaattaataat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aaacaatcatcaggttcaattaatttcacaataccattatcatcatcattaattaataat 780


Query: 781 acaactaaagtaatatcatataattcattatttaattttaattatattcattcttggcca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 acaactaaagtaatatcatataattcattatttaattttaattatattcattcttggcca 840


Query: 841 gttcatgtaaatttaataaatgatgctctattaagaaatcataatggtataggtatagaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gttcatgtaaatttaataaatgatgctctattaagaaatcataatggtataggtatagaa 900


Query: 901 tgtacttctttaccatttgatcatatattaacaagttttcaaaaggcaagtcaaggtatg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tgtacttctttaccatttgatcatatattaacaagttttcaaaaggcaagtcaaggtatg 960


Query: 961 aatattcaatcaattgtttatttcattgtaattatgatggctggattttcattgatggca 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aatattcaatcaattgtttatttcattgtaattatgatggctggattttcattgatggca 1020


Query: 1021 ggttcttttgctggtagtatctctcaagagcgtacaaatagaattaa 1067
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ggttcttttgctggtagtatctctcaagagcgtacaaatagaattaa 1067


Score = 1332 bits (672), Expect = 0.0
Identities = 675/675 (100%)
Strand = Plus / Plus


Query: 1088 accngttagtatgctagctggtgatattctaccaacaagtggtcaaataactatcaatgg 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 accngttagtatgctagctggtgatattctaccaacaagtggtcaaataactatcaatgg 1147


Query: 1148 tcatgatttagtaaccgatagagctcaagctttacgtggtgtttctgtatgtccacaatt 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1148 tcatgatttagtaaccgatagagctcaagctttacgtggtgtttctgtatgtccacaatt 1207


Query: 1208 tgatgcattaataacattattaactgctcgtgaacagttatctctatattgtgcaatcaa 1267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1208 tgatgcattaataacattattaactgctcgtgaacagttatctctatattgtgcaatcaa 1267


Query: 1268 aggtgtaccagatgataaaatatcactagtagttgaagcattcattaaaatgatggatct 1327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1268 aggtgtaccagatgataaaatatcactagtagttgaagcattcattaaaatgatggatct 1327


Query: 1328 tggtaaaattgcaaattcaaatactggtggttattcaggtggtaataaaagaaaagtttc 1387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1328 tggtaaaattgcaaattcaaatactggtggttattcaggtggtaataaaagaaaagtttc 1387


Query: 1388 attatcaattgcaatgcttggtaatccatcagtagttttaatcgatgaagcatcatcagg 1447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1388 attatcaattgcaatgcttggtaatccatcagtagttttaatcgatgaagcatcatcagg 1447


Query: 1448 ttgtgatccaatcattagataccgtcaatgtcaagtaattagtgaattgggtaaaaataa 1507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1448 ttgtgatccaatcattagataccgtcaatgtcaagtaattagtgaattgggtaaaaataa 1507


Query: 1508 agtcatcattttaacttctcattcaatgtctgaaattcaagcattatgttcaagaatgac 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1508 agtcatcattttaacttctcattcaatgtctgaaattcaagcattatgttcaagaatgac 1567


Query: 1568 aattatgagagatggtcaattcaaatgtttaggatcaactcaacatattaaatctaaatt 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1568 aattatgagagatggtcaattcaaatgtttaggatcaactcaacatattaaatctaaatt 1627


Query: 1628 tggagcagggtattcagttgaagttaaatttaaaaagagttgtttagaagttggtattcc 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1628 tggagcagggtattcagttgaagttaaatttaaaaagagttgtttagaagttggtattcc 1687


Query: 1688 acaaagtcttcattagaacaagtatttttaaaattaactggtgcaactcatgaagatcgt 1747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1688 acaaagtcttcattagaacaagtatttttaaaattaactggtgcaactcatgaagatcgt 1747


Query: 1748 ttaaatttaaataac 1762
|||||||||||||||
Sbjct: 1748 ttaaatttaaataac 1762


Score = 42.1 bits (21), Expect = 0.002
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 1785 ttccaaattccgtattaaata 1805
|||||||||||||||||||||
Sbjct: 1785 ttccaaattccgtattaaata 1805


>Contig-U12817-1 (Contig-U12817-1Q) /CSM_Contig/Contig-U12817-1Q.Seq.d
Length = 2530

Score = 1205 bits (608), Expect = 0.0
Identities = 608/608 (100%)
Strand = Plus / Plus


Query: 1092 gttagtatgctagctggtgatattctaccaacaagtggtcaaataactatcaatggtcat 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gttagtatgctagctggtgatattctaccaacaagtggtcaaataactatcaatggtcat 774


Query: 1152 gatttagtaaccgatagagctcaagctttacgtggtgtttctgtatgtccacaatttgat 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gatttagtaaccgatagagctcaagctttacgtggtgtttctgtatgtccacaatttgat 834


Query: 1212 gcattaataacattattaactgctcgtgaacagttatctctatattgtgcaatcaaaggt 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 gcattaataacattattaactgctcgtgaacagttatctctatattgtgcaatcaaaggt 894


Query: 1272 gtaccagatgataaaatatcactagtagttgaagcattcattaaaatgatggatcttggt 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 gtaccagatgataaaatatcactagtagttgaagcattcattaaaatgatggatcttggt 954


Query: 1332 aaaattgcaaattcaaatactggtggttattcaggtggtaataaaagaaaagtttcatta 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 aaaattgcaaattcaaatactggtggttattcaggtggtaataaaagaaaagtttcatta 1014


Query: 1392 tcaattgcaatgcttggtaatccatcagtagttttaatcgatgaagcatcatcaggttgt 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 tcaattgcaatgcttggtaatccatcagtagttttaatcgatgaagcatcatcaggttgt 1074


Query: 1452 gatccaatcattagataccgtcaatgtcaagtaattagtgaattgggtaaaaataaagtc 1511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 gatccaatcattagataccgtcaatgtcaagtaattagtgaattgggtaaaaataaagtc 1134


Query: 1512 atcattttaacttctcattcaatgtctgaaattcaagcattatgttcaagaatgacaatt 1571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 atcattttaacttctcattcaatgtctgaaattcaagcattatgttcaagaatgacaatt 1194


Query: 1572 atgagagatggtcaattcaaatgtttaggatcaactcaacatattaaatctaaatttgga 1631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 atgagagatggtcaattcaaatgtttaggatcaactcaacatattaaatctaaatttgga 1254


Query: 1632 gcagggtattcagttgaagttaaatttaaaaagagttgtttagaagttggtattccacaa 1691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 gcagggtattcagttgaagttaaatttaaaaagagttgtttagaagttggtattccacaa 1314


Query: 1692 agtcttca 1699
||||||||
Sbjct: 1315 agtcttca 1322


Score = 135 bits (68), Expect = 2e-31
Identities = 68/68 (100%)
Strand = Plus / Plus


Query: 1695 cttcattagaacaagtatttttaaaattaactggtgcaactcatgaagatcgtttaaatt 1754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1490 cttcattagaacaagtatttttaaaattaactggtgcaactcatgaagatcgtttaaatt 1549


Query: 1755 taaataac 1762
||||||||
Sbjct: 1550 taaataac 1557


>Contig-U13805-1 (Contig-U13805-1Q) /CSM_Contig/Contig-U13805-1Q.Seq.d
Length = 619

Score = 61.9 bits (31), Expect = 2e-09
Identities = 76/91 (83%)
Strand = Plus / Plus


Query: 946 gcaagtcaaggtatgaatattcaatcaattgtttatttcattgtaattatgatggctgga 1005
|||||| |||||||||||||| |||||| ||||| || ||| | ||||||||||| ||
Sbjct: 443 gcaagtgaaggtatgaatatttcatcaatcgtttactttattattattatgatggcaggt 502


Query: 1006 ttttcattgatggcaggttcttttgctggta 1036
| | |||| ||||||||||| || |||||||
Sbjct: 503 tatgcattaatggcaggttcattcgctggta 533


Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus


Query: 821 attatattcattcttggccagttcatgtaaatttaataaatgatgctctattaagaaatc 880
||||||||||||| | ||||||||| | |||||| | |||||||| |||||||||| |
Sbjct: 318 attatattcattcattaccagttcatattaatttagtgaatgatgccgtattaagaaaac 377


Query: 881 ataat 885
|||||
Sbjct: 378 ataat 382


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 39,424
Number of Sequences: 6905
Number of extensions: 39424
Number of successful extensions: 4984
Number of sequences better than 10.0: 615
length of query: 1805
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1789
effective length of database: 5,564,391
effective search space: 9954695499
effective search space used: 9954695499
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.27
Homology vs DNA
Query= Contig-U11922-1 (Contig-U11922-1Q) /CSM_Contig/Contig-U11922-1Q.Seq.d
(1805 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ385242) Dictyostelium discoideum cDNA clone:ddc54f09, 3' ... 1332 0.0 2
(AF465307) Dictyostelium discoideum ABC transporter ABCA.5 (... 1302 0.0 1
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 1302 0.0 1
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 1302 0.0 1
(BJ394784) Dictyostelium discoideum cDNA clone:dds36p08, 5' ... 1176 0.0 1
(BJ402730) Dictyostelium discoideum cDNA clone:dds17g22, 3' ... 908 0.0 3
(BJ343886) Dictyostelium discoideum cDNA clone:dda17b18, 3' ... 912 0.0 2
(BJ406794) Dictyostelium discoideum cDNA clone:dds36p08, 3' ... 894 0.0 3
(BJ400825) Dictyostelium discoideum cDNA clone:dds15b02, 3' ... 878 0.0 3
(BJ356315) Dictyostelium discoideum cDNA clone:dda59n20, 3' ... 866 0.0 2
(BJ343701) Dictyostelium discoideum cDNA clone:dda16k24, 3' ... 825 0.0 4
(BJ338006) Dictyostelium discoideum cDNA clone:dda59c20, 5' ... 747 0.0 3
(BJ372552) Dictyostelium discoideum cDNA clone:ddc13i04, 3' ... 728 0.0 2
(BJ359161) Dictyostelium discoideum cDNA clone:ddc13i04, 5' ... 745 0.0 1
(BJ370488) Dictyostelium discoideum cDNA clone:ddc54f09, 5' ... 466 0.0 3
(BJ391081) Dictyostelium discoideum cDNA clone:dds15b02, 5' ... 498 e-136 1
(AF465304) Dictyostelium discoideum ABC transporter ABCA.2 (... 133 1e-83 8
(BJ389185) Dictyostelium discoideum cDNA clone:dds17g22, 5' ... 321 5e-83 1
(AF465308) Dictyostelium discoideum ABC transporter ABCA.6 (... 121 4e-71 10
(BJ432093) Dictyostelium discoideum cDNA clone:ddv17i15, 3' ... 133 1e-48 3
(BJ352218) Dictyostelium discoideum cDNA clone:dda46e04, 3' ... 133 1e-48 3
(BJ344523) Dictyostelium discoideum cDNA clone:dda19j15, 3' ... 133 6e-47 3
(C83941) Dictyostelium discoideum slug cDNA, clone SLA517. 135 2e-39 2
(AF465305) Dictyostelium discoideum ABC transporter ABCA.3 (... 62 2e-37 12
(BJ446811) Dictyostelium discoideum cDNA clone:ddv63m20, 3' ... 94 5e-37 3
(BJ413976) Dictyostelium discoideum cDNA clone:ddv17i15, 5' ... 80 5e-36 3
(BJ357214) Dictyostelium discoideum cDNA clone:dda62f20, 3' ... 88 3e-35 3
(AF465306) Dictyostelium discoideum ABC transporter ABCA.4 (... 66 3e-33 9
(AU074102) Dictyostelium discoideum slug cDNA, clone SSJ520. 135 6e-27 1
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 66 1e-23 16
(BJ385853) Dictyostelium discoideum cDNA clone:ddc56j08, 3' ... 64 8e-19 3
(AU060175) Dictyostelium discoideum slug cDNA, clone SLA517. 88 1e-12 1
(BJ427881) Dictyostelium discoideum cDNA clone:ddv63m20, 5' ... 62 3e-05 2
(AK250042) Hordeum vulgare subsp. vulgare cDNA clone: FLbaf6... 46 0.002 3
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 36 0.003 17
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 42 0.020 15
(AL445563) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 36 0.029 14
(AB126701) Tetraclita japonica mitochondrial DNA, complete g... 52 0.075 1
(AX392733) Sequence 23 from Patent WO0212526. 42 0.082 5
(AR707080) Sequence 23 from patent US 6933145. 42 0.082 5
(DJ358587) METHODS AND NUCLEIC ACIDS FOR THE ANALYSIS OF GEN... 36 0.084 4
(DJ358563) METHODS AND NUCLEIC ACIDS FOR THE ANALYSIS OF GEN... 36 0.084 4
(CS114306) Sequence 1064 from Patent WO2005054517. 36 0.084 4
(CS114282) Sequence 1040 from Patent WO2005054517. 36 0.084 4
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 38 0.085 13
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 38 0.099 9
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 34 0.12 12
(AP010517) Lotus japonicus genomic DNA, chromosome 2, clone:... 50 0.30 1
(AC181122) Strongylocentrotus purpuratus clone R3-16J14, WOR... 50 0.30 1
(AC176980) Strongylocentrotus purpuratus clone R3-1103C23, W... 50 0.30 1
(AC168725) Strongylocentrotus purpuratus clone R3-3010N18, W... 50 0.30 1
(CW869779) she2h14-61.g_068.ab1 Whole-genome shotgun library... 50 0.30 1
(CE351715) tigr-gss-dog-17000361404424 Dog Library Canis lup... 50 0.30 1
(AX356394) Sequence 28 from Patent WO0181622. 36 0.32 4
(AX345571) Sequence 642 from Patent WO0200928. 36 0.32 4
(AX281157) Sequence 22 from Patent WO0177377. 36 0.32 4
(AR453045) Sequence 22 from patent US 6677731. 36 0.32 4
(AL929353) Plasmodium falciparum strain 3D7, chromosome 5, s... 32 0.32 14
(ER430708) 1092963776267 Global-Ocean-Sampling_GS-35-01-01-1... 36 0.42 3
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 34 0.50 13
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 38 0.59 15
(AC178162) Strongylocentrotus purpuratus clone R3-3081I21, W... 42 0.63 6
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 38 0.68 19
(AC179630) Strongylocentrotus purpuratus clone R3-1025M21, W... 38 0.70 5
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 32 0.75 11
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 34 0.77 11
(AC156209) Bos taurus clone CH240-43G19, WORKING DRAFT SEQUE... 34 0.96 7
(AM180355) Clostridium difficile 630 complete genome. 36 1.1 20
(BJ369590) Dictyostelium discoideum cDNA clone:ddc51i01, 5' ... 46 1.1 2
(BX908775) Zebrafish DNA sequence from clone CH211-255L12 in... 48 1.2 1
(BX539348) Zebrafish DNA sequence from clone DKEY-273G16 in ... 48 1.2 1
(BX072540) Zebrafish DNA sequence from clone CH211-103M6 in ... 48 1.2 1
(AC216772) Populus trichocarpa clone POP096-M07, complete se... 48 1.2 1
(AR551704) Sequence 6835 from patent US 6747137. 48 1.2 1
(CU855515) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 1.2 1
(BX936407) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 48 1.2 1
(AC183862) Sus scrofa clone RP44-422M13, WORKING DRAFT SEQUE... 48 1.2 1
(AC183730) Sus scrofa clone RP44-92D18, WORKING DRAFT SEQUEN... 48 1.2 1
(AC173889) Bos taurus clone CH240-271C9, WORKING DRAFT SEQUE... 48 1.2 1
(AC162955) Bos taurus clone CH240-127M21, WORKING DRAFT SEQU... 48 1.2 1
(AC007926) Trypanosoma brucei chromosome II clone RPCI93-3H1... 48 1.2 1
(AJ548708) Trypanosoma brucei GSS, clone 6e1. 48 1.2 1
(CT341550) Sus scrofa genomic clone CH242-377K20, genomic su... 48 1.2 1
(CT189187) Sus scrofa genomic clone PigE-76E16, genomic surv... 48 1.2 1
(CD080444) MA3-9999U-M310-A07-U.B MA3-0001 Schistosoma manso... 48 1.2 1
(BM167028) EST569551 PyBS Plasmodium yoelii yoelii cDNA clon... 48 1.2 1
(AA629510) MU000123.Y2R SmL Schistosoma mansoni cDNA clone M... 48 1.2 1
(AE006319) Lactococcus lactis subsp. lactis IL1403 section 8... 48 1.2 1
(AE017308) Mycoplasma mobile 163K complete genome. 32 1.4 22
(AP001578) Homo sapiens genomic DNA, chromosome 6q25.2, clon... 42 1.4 9
(CU459088) Zebrafish DNA sequence from clone CH73-294F19 in ... 36 1.5 5
(CR450776) Zebrafish DNA sequence from clone DKEY-48J7 in li... 36 1.6 6
(BJ379955) Dictyostelium discoideum cDNA clone:ddc36e17, 3' ... 46 1.7 2
(AC128448) Rattus norvegicus clone CH230-117G16, *** SEQUENC... 34 2.1 10
(DY888344) CeleSEQ5225 Cunninghamella elegans pBluescript (E... 40 2.2 2
(AC184325) Strongylocentrotus purpuratus clone R3-1037F14, W... 36 2.3 2
(AC178511) Strongylocentrotus purpuratus clone R3-113H12, WO... 36 2.3 2
(AC184313) Strongylocentrotus purpuratus clone R3-3093M3, WO... 36 2.4 2
(AC139192) Pan troglodytes BAC clone RP43-44N16 from chromos... 46 2.4 7
(AL445565) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 36 2.4 13

>(BJ385242) Dictyostelium discoideum cDNA clone:ddc54f09, 3' end,
single read.
Length = 719

Score = 1332 bits (672), Expect(2) = 0.0
Identities = 675/675 (100%)
Strand = Plus / Minus


Query: 1088 accngttagtatgctagctggtgatattctaccaacaagtggtcaaataactatcaatgg 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 accngttagtatgctagctggtgatattctaccaacaagtggtcaaataactatcaatgg 660


Query: 1148 tcatgatttagtaaccgatagagctcaagctttacgtggtgtttctgtatgtccacaatt 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 tcatgatttagtaaccgatagagctcaagctttacgtggtgtttctgtatgtccacaatt 600


Query: 1208 tgatgcattaataacattattaactgctcgtgaacagttatctctatattgtgcaatcaa 1267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tgatgcattaataacattattaactgctcgtgaacagttatctctatattgtgcaatcaa 540


Query: 1268 aggtgtaccagatgataaaatatcactagtagttgaagcattcattaaaatgatggatct 1327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 aggtgtaccagatgataaaatatcactagtagttgaagcattcattaaaatgatggatct 480


Query: 1328 tggtaaaattgcaaattcaaatactggtggttattcaggtggtaataaaagaaaagtttc 1387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tggtaaaattgcaaattcaaatactggtggttattcaggtggtaataaaagaaaagtttc 420


Query: 1388 attatcaattgcaatgcttggtaatccatcagtagttttaatcgatgaagcatcatcagg 1447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 attatcaattgcaatgcttggtaatccatcagtagttttaatcgatgaagcatcatcagg 360


Query: 1448 ttgtgatccaatcattagataccgtcaatgtcaagtaattagtgaattgggtaaaaataa 1507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ttgtgatccaatcattagataccgtcaatgtcaagtaattagtgaattgggtaaaaataa 300


Query: 1508 agtcatcattttaacttctcattcaatgtctgaaattcaagcattatgttcaagaatgac 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 agtcatcattttaacttctcattcaatgtctgaaattcaagcattatgttcaagaatgac 240


Query: 1568 aattatgagagatggtcaattcaaatgtttaggatcaactcaacatattaaatctaaatt 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 aattatgagagatggtcaattcaaatgtttaggatcaactcaacatattaaatctaaatt 180


Query: 1628 tggagcagggtattcagttgaagttaaatttaaaaagagttgtttagaagttggtattcc 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tggagcagggtattcagttgaagttaaatttaaaaagagttgtttagaagttggtattcc 120


Query: 1688 acaaagtcttcattagaacaagtatttttaaaattaactggtgcaactcatgaagatcgt 1747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 acaaagtcttcattagaacaagtatttttaaaattaactggtgcaactcatgaagatcgt 60


Query: 1748 ttaaatttaaataac 1762
|||||||||||||||
Sbjct: 59 ttaaatttaaataac 45

Score = 42.1 bits (21), Expect(2) = 0.0
Identities = 21/21 (100%)
Strand = Plus / Minus


Query: 1785 ttccaaattccgtattaaata 1805
|||||||||||||||||||||
Sbjct: 22 ttccaaattccgtattaaata 2

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,065,943,140
Number of extensions: 127458342
Number of successful extensions: 10538047
Number of sequences better than 10.0: 189
Length of query: 1805
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1781
Effective length of database: 97,308,875,965
Effective search space: 173307108093665
Effective search space used: 173307108093665
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 1
Homology vs Protein
Query= Contig-U11922-1 (Contig-U11922-1Q) /CSM_Contig/Contig-U11922-1Q.Seq.d
(1805 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q8T6J1) RecName: Full=ABC transporter A family member 6; AltNam... 327 9e-88
(Q555Z5) RecName: Full=ABC transporter A family member 4; AltNam... 239 2e-61
AF465306_1(AF465306|pid:none) Dictyostelium discoideum ABC trans... 239 2e-61
AY509741_1(AY509741|pid:none) Xenopus tropicalis retinal-specifi... 179 4e-43
AY429516_1(AY429516|pid:none) Xenopus laevis retinal ABCA4 trans... 179 4e-43
FN357442_20(FN357442|pid:none) Schistosoma mansoni genome sequen... 173 2e-41
CR954218_146(CR954218|pid:none) Ostreococcus tauri strain OTTH05... 173 2e-41
CR450809_5(CR450809|pid:none) Zebrafish DNA sequence from clone ... 171 6e-41
U88667_1(U88667|pid:none) Human ATP binding cassette transporter... 170 2e-40
AK296896_1(AK296896|pid:none) Homo sapiens cDNA FLJ51966 complet... 169 4e-40
AB210040_1(AB210040|pid:none) Homo sapiens mRNA for ABCA4 varian... 168 5e-40
AF001945_1(AF001945|pid:none) Homo sapiens rim ABC transporter (... 168 5e-40
AB384391_1(AB384391|pid:none) Synthetic construct DNA, clone: pF... 168 7e-40
(Q99758) RecName: Full=ATP-binding cassette sub-family A member ... 168 7e-40
A59188(A59188) ATP-binding cassette transporter ABC3 - human &U... 168 7e-40
AK301764_1(AK301764|pid:none) Homo sapiens cDNA FLJ51129 complet... 168 7e-40
AK129274_1(AK129274|pid:none) Mus musculus mRNA for mKIAA1062 pr... 167 9e-40
(P41234) RecName: Full=ATP-binding cassette sub-family A member ... 167 9e-40
X75927_1(X75927|pid:none) Mus musculus mRNA for ABC transporter ... 167 9e-40
AL732557_15(AL732557|pid:none) Mouse DNA sequence from clone RP2... 167 9e-40
BC042663_1(BC042663|pid:none) Mus musculus ATP-binding cassette,... 167 2e-39
(Q9ESR9) RecName: Full=ATP-binding cassette sub-family A member ... 167 2e-39
BC150708_1(BC150708|pid:none) Mus musculus ATP-binding cassette,... 166 2e-39
DQ146416_1(DQ146416|pid:none) Sarcoptes scabiei type hominis ABC... 166 3e-39
CT005250_126(CT005250|pid:none) Leishmania major strain Friedlin... 166 3e-39
AY427777_1(AY427777|pid:none) Canis familiaris isolate AS22 ABCA... 166 3e-39
AY427778_1(AY427778|pid:none) Canis familiaris isolate AS23 ABCA... 166 3e-39
AM494948_102(AM494948|pid:none) Leishmania braziliensis chromoso... 164 1e-38
BX842685_2(BX842685|pid:none) Zebrafish DNA sequence from clone ... 163 2e-38
U90126_1(U90126|pid:none) Bos taurus ABC transporter mRNA, compl... 163 2e-38
AJ844280_1(AJ844280|pid:none) Pecten maximus mRNA for ATP-bindin... 162 3e-38
AB112584_1(AB112584|pid:none) Mus musculus mRNA for ATP-binding ... 161 6e-38
AB196699_1(AB196699|pid:none) Rattus norvegicus ABCA17 mRNA for ... 160 1e-37
DQ059505_1(DQ059505|pid:none) Bos taurus ATP-binding cassette su... 160 1e-37
AX088337_1(AX088337|pid:none) Sequence 1 from Patent WO0114414. ... 160 2e-37
AF327705_1(AF327705|pid:none) Homo sapiens ABC transporter ABCA2... 160 2e-37
BC008755_1(BC008755|pid:none) Homo sapiens ATP-binding cassette,... 160 2e-37
AB028985_1(AB028985|pid:none) Homo sapiens mRNA for KIAA1062 pro... 160 2e-37
AK295489_1(AK295489|pid:none) Homo sapiens cDNA FLJ61118 complet... 160 2e-37
AL162060_1(AL162060|pid:none) Homo sapiens mRNA; cDNA DKFZp547P1... 160 2e-37
(Q9BZC7) RecName: Full=ATP-binding cassette sub-family A member ... 160 2e-37
AY032590_1(AY032590|pid:none) Arabidopsis thaliana ATP-binding c... 159 2e-37
A84845(A84845)probable ABC transporter [imported] - Arabidopsis ... 159 2e-37
AB109217_1(AB109217|pid:none) Arabidopsis thaliana abca1 mRNA fo... 159 2e-37
T00826(T00826)hypothetical protein T32G6.22 - Arabidopsis thalia... 159 2e-37
CT005250_128(CT005250|pid:none) Leishmania major strain Friedlin... 159 2e-37
AY243470_1(AY243470|pid:none) Mus musculus ATP-binding cassette ... 159 3e-37
AF230978_1(AF230978|pid:none) Trypanosoma cruzi ABCA1 transporte... 159 3e-37
AY208182_1(AY208182|pid:none) Rattus norvegicus ATP-binding cass... 159 4e-37
CT005250_124(CT005250|pid:none) Leishmania major strain Friedlin... 159 4e-37
AB445477_1(AB445477|pid:none) Homo sapiens ABCA1 mRNA for ATP-bi... 158 5e-37
AM502229_128(AM502229|pid:none) Leishmania infantum chromosome 11. 158 5e-37
AF285167_1(AF285167|pid:none) Homo sapiens ATP-binding cassette ... 158 5e-37
BC146856_1(BC146856|pid:none) Homo sapiens ATP-binding cassette,... 158 5e-37
AF362377_1(AF362377|pid:none) Gallus gallus ATP-binding cassette... 158 5e-37
AB055982_1(AB055982|pid:none) Homo sapiens mRNA for ABCA1, compl... 158 5e-37
AX883265_1(AX883265|pid:none) Sequence 18170 from Patent EP10746... 158 5e-37
AM502229_126(AM502229|pid:none) Leishmania infantum chromosome 11. 158 7e-37
AM502229_121(AM502229|pid:none) Leishmania infantum chromosome 11. 157 1e-36
AE014298_3224(AE014298|pid:none) Drosophila melanogaster chromos... 157 2e-36
AE014296_3124(AE014296|pid:none) Drosophila melanogaster chromos... 156 2e-36
AM502245_55(AM502245|pid:none) Leishmania infantum chromosome 27. 156 3e-36
CP000079_98(CP000079|pid:none) Leishmania major strain Friedlin ... 156 3e-36
AM494964_105(AM494964|pid:none) Leishmania braziliensis chromoso... 154 8e-36
FN357599_8(FN357599|pid:none) Schistosoma mansoni genome sequenc... 154 1e-35
(P41233) RecName: Full=ATP-binding cassette sub-family A member ... 153 2e-35
A54774(A54774) ATP binding cassette transporter ABC1 - mouse &X... 153 2e-35
AM494948_96(AM494948|pid:none) Leishmania braziliensis chromosom... 152 3e-35
AM494948_101(AM494948|pid:none) Leishmania braziliensis chromoso... 152 4e-35
AM494948_100(AM494948|pid:none) Leishmania braziliensis chromoso... 152 4e-35
BC158063_1(BC158063|pid:none) Mus musculus ATP-binding cassette,... 151 9e-35
AF328787_1(AF328787|pid:none) Homo sapiens ABC transporter membe... 150 1e-34
AK097344_1(AK097344|pid:none) Homo sapiens cDNA FLJ40025 fis, cl... 150 1e-34
AY033486_1(AY033486|pid:none) Homo sapiens ATP-binding cassette ... 150 1e-34
(Q86UK0) RecName: Full=ATP-binding cassette sub-family A member ... 150 1e-34
AK123578_1(AK123578|pid:none) Homo sapiens cDNA FLJ41584 fis, cl... 150 1e-34
AF311102_1(AF311102|pid:none) Homo sapiens ABC transporter ABCA7... 150 1e-34
BC156327_1(BC156327|pid:none) Synthetic construct Homo sapiens c... 150 1e-34
AF418105_1(AF418105|pid:none) Homo sapiens ATP-binding cassette ... 150 1e-34
AY219711_1(AY219711|pid:none) Homo sapiens ABCA12 transporter su... 150 1e-34
AX320362_1(AX320362|pid:none) Sequence 1 from Patent WO0187978. ... 150 1e-34
AK101910_1(AK101910|pid:none) Oryza sativa Japonica Group cDNA c... 150 1e-34
AF287263_1(AF287263|pid:none) Mus musculus ATP-binding cassette ... 149 4e-34
AM502229_123(AM502229|pid:none) Leishmania infantum chromosome 11. 146 2e-33
AP003904_1(AP003904|pid:none) Oryza sativa Japonica Group genomi... 146 2e-33
AP008214_993(AP008214|pid:none) Oryza sativa (japonica cultivar-... 146 2e-33
AM502229_122(AM502229|pid:none) Leishmania infantum chromosome 11. 146 2e-33
AK128516_1(AK128516|pid:none) Homo sapiens cDNA FLJ46673 fis, cl... 145 5e-33
AX797494_1(AX797494|pid:none) Sequence 1 from Patent WO03048297. 145 5e-33
AY204751_1(AY204751|pid:none) Homo sapiens ABC A13 mRNA, complet... 145 5e-33
(Q86UQ4) RecName: Full=ATP-binding cassette sub-family A member ... 145 5e-33
AY243471_1(AY243471|pid:none) Mus musculus ATP-binding cassette ... 145 5e-33
AK091270_1(AK091270|pid:none) Homo sapiens cDNA FLJ33951 fis, cl... 145 5e-33
(Q8T5Z7) RecName: Full=ABC transporter A family member 1; AltNam... 145 6e-33
AF101313_1(AF101313|pid:none) Caenorhabditis elegans cosmid Y39D... 145 6e-33
C88925(C88925)protein F33E11.4 [imported] - Caenorhabditis elegans 145 6e-33
T18288(T18288)ABC transport protein - slime mold (Dictyostelium ... 145 6e-33
CP000078_31(CP000078|pid:none) Leishmania major strain Friedlin ... 144 1e-32
CT005250_123(CT005250|pid:none) Leishmania major strain Friedlin... 144 1e-32
BC043937_1(BC043937|pid:none) Mus musculus ATP-binding cassette,... 143 2e-32
AL807752_21(AL807752|pid:none) Human DNA sequence from clone RP1... 142 3e-32
(Q9FLT8) RecName: Full=Putative ABC2 homolog 16; &AB010069_1(AB... 142 5e-32
AM494939_35(AM494939|pid:none) Leishmania braziliensis chromosom... 140 2e-31
AY160971_1(AY160971|pid:none) Mus musculus ATP-binding cassette ... 140 2e-31
(Q9STT5) RecName: Full=Probable ABC2 homolog 6; 139 3e-31
AL049746_11(AL049746|pid:none) Arabidopsis thaliana DNA chromoso... 139 3e-31
AF003138_6(AF003138|pid:none) Caenorhabditis elegans cosmid F12B... 139 3e-31
T15200(T15200)hypothetical protein F12B6.1 - Caenorhabditis eleg... 139 3e-31
BT070844_1(BT070844|pid:none) Picea sitchensis clone WS02756_K03... 139 4e-31
CT005254_76(CT005254|pid:none) Leishmania major strain Friedlin,... 139 4e-31
(Q9FLT4) RecName: Full=ABC2 homolog 14; &AB010069_5(AB010069|pi... 137 1e-30
(Q1PEH6) RecName: Full=ABC2 homolog 2; 137 2e-30
BC142602_1(BC142602|pid:none) Danio rerio zgc:163009, mRNA (cDNA... 135 4e-30
AP008208_692(AP008208|pid:none) Oryza sativa (japonica cultivar-... 135 5e-30
(Q9FLT5) RecName: Full=ABC2 homolog 11; &AB010069_4(AB010069|pi... 135 6e-30
AB067475_1(AB067475|pid:none) Homo sapiens mRNA for KIAA1888 pro... 134 1e-29
AY028897_1(AY028897|pid:none) Homo sapiens ATP-binding cassette ... 134 1e-29
(Q8K448) RecName: Full=ATP-binding cassette sub-family A member ... 134 1e-29
AC146548_25(AC146548|pid:none) Medicago truncatula clone mth2-2p... 133 2e-29
(Q9STT6) RecName: Full=Putative ABC2 homolog 5; &AL049746_10(AL... 132 4e-29
AF491842_1(AF491842|pid:none) Mus musculus ATP-binding cassette ... 132 4e-29
AK056533_1(AK056533|pid:none) Homo sapiens cDNA FLJ31971 fis, cl... 132 5e-29
AP003977_23(AP003977|pid:none) Oryza sativa Japonica Group genom... 132 5e-29
BC169142_1(BC169142|pid:none) Xenopus tropicalis ATP-binding cas... 131 9e-29
BC154873_1(BC154873|pid:none) Xenopus tropicalis ATP-binding cas... 131 9e-29
AC146548_21(AC146548|pid:none) Medicago truncatula clone mth2-2p... 130 1e-28
BX640746_1(BX640746|pid:none) Homo sapiens mRNA; cDNA DKFZp686K0... 130 2e-28
AK292592_1(AK292592|pid:none) Homo sapiens cDNA FLJ77193 partial... 130 2e-28
AP003904_2(AP003904|pid:none) Oryza sativa Japonica Group genomi... 130 2e-28
AY028899_1(AY028899|pid:none) Homo sapiens ATP-binding cassette ... 130 2e-28
(Q54DT1) RecName: Full=ABC transporter A family member 9; AltNam... 130 2e-28
AF465311_1(AF465311|pid:none) Dictyostelium discoideum ABC trans... 130 2e-28
AB020629_1(AB020629|pid:none) Homo sapiens mRNA for KIAA0822 pro... 129 3e-28
AM502247_77(AM502247|pid:none) Leishmania infantum chromosome 29. 129 3e-28
(O94911) RecName: Full=ATP-binding cassette sub-family A member 8; 129 3e-28
AM489103_1(AM489103|pid:none) Vitis vinifera contig VV78X067185.... 129 3e-28
BC130280_1(BC130280|pid:none) Homo sapiens ATP-binding cassette,... 129 3e-28
AY247065_1(AY247065|pid:none) Homo sapiens ATP-binding cassette ... 129 4e-28
AX657703_1(AX657703|pid:none) Sequence 3 from Patent WO02103015. 129 4e-28
BC051320_1(BC051320|pid:none) Homo sapiens ATP-binding cassette,... 129 4e-28
AK298508_1(AK298508|pid:none) Homo sapiens cDNA FLJ51271 complet... 129 4e-28
(Q8WWZ4) RecName: Full=ATP-binding cassette sub-family A member ... 129 4e-28
AC146548_19(AC146548|pid:none) Medicago truncatula clone mth2-2p... 129 5e-28
CP000080_61(CP000080|pid:none) Leishmania major strain Friedlin ... 129 5e-28
CU633438_347(CU633438|pid:none) Podospora anserina genomic DNA c... 128 6e-28
(Q8K449) RecName: Full=ATP-binding cassette sub-family A member ... 127 1e-27
AL603792_3(AL603792|pid:none) Mouse DNA sequence from clone RP23... 127 1e-27
AF498362_1(AF498362|pid:none) Mus musculus ATP-binding cassette ... 127 2e-27
AL807245_1(AL807245|pid:none) Mouse DNA sequence from clone RP23... 127 2e-27
AJ550165_1(AJ550165|pid:none) Rattus norvegicus mRNA for ATP-bin... 127 2e-27
AK173034_1(AK173034|pid:none) Mus musculus mRNA for mKIAA0822 pr... 127 2e-27
AK047188_1(AK047188|pid:none) Mus musculus 10 days neonate cereb... 126 3e-27
AL671964_2(AL671964|pid:none) Mouse DNA sequence from clone RP23... 126 3e-27
AK165458_1(AK165458|pid:none) Mus musculus adult male kidney cDN... 125 4e-27
CR548612_405(CR548612|pid:none) Paramecium tetraurelia macronucl... 125 7e-27
AL603792_4(AL603792|pid:none) Mouse DNA sequence from clone RP23... 125 7e-27
BC026496_1(BC026496|pid:none) Mus musculus ATP-binding cassette,... 125 7e-27
AK031843_1(AK031843|pid:none) Mus musculus adult male medulla ob... 125 7e-27
BC150132_1(BC150132|pid:none) Bos taurus ATP-binding cassette, s... 123 2e-26
AK304286_1(AK304286|pid:none) Homo sapiens cDNA FLJ50363 complet... 123 3e-26
AB255881_1(AB255881|pid:none) Mus musculus abca8a mRNA for ABC t... 122 3e-26
AB255882_1(AB255882|pid:none) Mus musculus abca8a mRNA for ABC t... 122 3e-26
AB168191_1(AB168191|pid:none) Macaca fascicularis testis cDNA cl... 122 4e-26
AK065426_1(AK065426|pid:none) Oryza sativa Japonica Group cDNA c... 122 6e-26
FN357911_4(FN357911|pid:none) Schistosoma mansoni genome sequenc... 121 7e-26
AL049746_6(AL049746|pid:none) Arabidopsis thaliana DNA chromosom... 121 1e-25
AK097296_1(AK097296|pid:none) Homo sapiens cDNA FLJ39977 fis, cl... 120 1e-25
AY028898_1(AY028898|pid:none) Homo sapiens ATP-binding cassette ... 120 1e-25
AK131360_1(AK131360|pid:none) Homo sapiens cDNA FLJ16398 fis, cl... 120 1e-25
AK125487_1(AK125487|pid:none) Homo sapiens cDNA FLJ43498 fis, cl... 120 1e-25
U01058_1(U01058|pid:none) Entamoeba histolytica HM-1:IHSS ABC-fa... 119 3e-25
AE014296_3135(AE014296|pid:none) Drosophila melanogaster chromos... 118 8e-25
BC125231_1(BC125231|pid:none) Homo sapiens ATP-binding cassette,... 118 8e-25
CR627382_1(CR627382|pid:none) Homo sapiens mRNA; cDNA DKFZp686F2... 118 8e-25
(Q8T6J0) RecName: Full=ABC transporter A family member 7; AltNam... 117 1e-24
AC072062_1(AC072062|pid:none) Homo sapiens BAC clone RP11-548N17... 117 1e-24
AB177854_1(AB177854|pid:none) Homo sapiens mRNA for KIAA1062 spl... 117 1e-24
AK007703_1(AK007703|pid:none) Mus musculus 10 day old male pancr... 115 5e-24
Z29117_11(Z29117|pid:none) Caenorhabditis elegans Cosmid C48B4, ... 115 5e-24
S60124(S60124;S40724;S40725)transport protein homolog C48B4.4 - ... 115 5e-24
BC168134_1(BC168134|pid:none) Xenopus tropicalis cDNA clone MGC:... 114 9e-24
CR382131_686(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 114 1e-23
AK044229_1(AK044229|pid:none) Mus musculus adult retina cDNA, RI... 113 2e-23
(Q8K441) RecName: Full=ATP-binding cassette sub-family A member ... 113 2e-23
AE014134_2482(AE014134|pid:none) Drosophila melanogaster chromos... 112 6e-23
AP007167_484(AP007167|pid:none) Aspergillus oryzae RIB40 genomic... 112 6e-23
AE014134_2483(AE014134|pid:none) Drosophila melanogaster chromos... 112 6e-23
AF465312_1(AF465312|pid:none) Dictyostelium discoideum ABC trans... 110 2e-22
AK166397_1(AK166397|pid:none) Mus musculus mammary gland RCB-052... 108 8e-22
AK051920_1(AK051920|pid:none) Mus musculus 12 days embryo eyebal... 107 1e-21
AF165306_1(AF165306|pid:none) Homo sapiens ATP cassette binding ... 107 1e-21
AE013599_3173(AE013599|pid:none) Drosophila melanogaster chromos... 107 1e-21
AE014297_2841(AE014297|pid:none) Drosophila melanogaster chromos... 106 3e-21
BC168468_1(BC168468|pid:none) Danio rerio zgc:172302, mRNA (cDNA... 105 4e-21
CP000027_509(CP000027|pid:none) Dehalococcoides ethenogenes 195,... 105 5e-21
AF213395_1(AF213395|pid:none) Mus musculus ATP-binding cassette ... 105 7e-21
CP000968_1127(CP000968|pid:none) Candidatus Korarchaeum cryptofi... 104 9e-21
CR450809_4(CR450809|pid:none) Zebrafish DNA sequence from clone ... 102 6e-20
CP001095_1355(CP001095|pid:none) Bifidobacterium longum subsp. i... 101 1e-19
AB024563_2(AB024563|pid:none) Bacillus halodurans gene for YFIL,... 100 1e-19
CP000951_2789(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 100 2e-19
CP000812_1221(CP000812|pid:none) Thermotoga lettingae TMO, compl... 100 2e-19
AJ965256_405(AJ965256|pid:none) Dehalococcoides sp. CBDB1 comple... 100 3e-19
BA000004_1054(BA000004|pid:none) Bacillus halodurans C-125 DNA, ... 99 4e-19
CP000090_3094(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 99 5e-19
AX644625_1(AX644625|pid:none) Sequence 7 from Patent WO02099108. 99 7e-19
CP000688_489(CP000688|pid:none) Dehalococcoides sp. BAV1, comple... 99 7e-19
CP000923_632(CP000923|pid:none) Thermoanaerobacter sp. X514, com... 98 9e-19
CP001104_1462(CP001104|pid:none) Eubacterium eligens ATCC 27750,... 98 1e-18
BA000004_3979(BA000004|pid:none) Bacillus halodurans C-125 DNA, ... 97 2e-18
AE010299_1496(AE010299|pid:none) Methanosarcina acetivorans str.... 97 2e-18
AP009049_2659(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 97 3e-18
CP001102_204(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 97 3e-18
CP000431_4740(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 97 3e-18
CP001100_1305(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 97 3e-18
CP000440_1487(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 97 3e-18
CP000885_1961(CP000885|pid:none) Clostridium phytofermentans ISD... 97 3e-18
AE008691_2024(AE008691|pid:none) Thermoanaerobacter tengcongensi... 96 3e-18
AP008955_2952(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 96 3e-18
CP000099_3249(CP000099|pid:none) Methanosarcina barkeri str. Fus... 96 3e-18
U80928_265(U80928|pid:none) Rhizobium etli CFN 42 plasmid symbio... 96 3e-18
AL939119_283(AL939119|pid:none) Streptomyces coelicolor A3(2) co... 96 3e-18
CP000780_422(CP000780|pid:none) Candidatus Methanoregula boonei ... 96 4e-18
AP009049_2203(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 96 4e-18
CP000089_3366(CP000089|pid:none) Dechloromonas aromatica RCB, co... 96 4e-18
CP000304_2638(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 96 4e-18
CP000267_2890(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 96 4e-18
BA000011_1068(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA... 96 4e-18
AJ639836_1(AJ639836|pid:none) Canis familiaris partial abca4 gen... 96 4e-18
AM180355_1951(AM180355|pid:none) Clostridium difficile 630 compl... 96 4e-18
CP000560_1104(CP000560|pid:none) Bacillus amyloliquefaciens FZB4... 96 6e-18
CP000923_958(CP000923|pid:none) Thermoanaerobacter sp. X514, com... 96 6e-18
CP001068_3189(CP001068|pid:none) Ralstonia pickettii 12J chromos... 96 6e-18
AC146548_28(AC146548|pid:none) Medicago truncatula clone mth2-2p... 96 6e-18
AP010934_5(AP010934|pid:none) Clostridium botulinum plasmid pC2C... 96 6e-18
CP001052_3502(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 95 7e-18
CP000780_2275(CP000780|pid:none) Candidatus Methanoregula boonei... 95 7e-18
AE017042_947(AE017042|pid:none) Yersinia pestis biovar Microtus ... 95 7e-18
AM114193_1169(AM114193|pid:none) Uncultured methanogenic archaeo... 95 7e-18
CP000853_1068(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 95 7e-18
CP000305_2811(CP000305|pid:none) Yersinia pestis Nepal516, compl... 95 7e-18
AP011115_4882(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 95 1e-17
CP000667_3369(CP000667|pid:none) Salinispora tropica CNB-440, co... 95 1e-17
CP000930_2727(CP000930|pid:none) Heliobacterium modesticaldum Ic... 95 1e-17
CP001076_310(CP001076|pid:none) Rhizobium etli CIAT 652 plasmid ... 95 1e-17
CP001078_3122(CP001078|pid:none) Clostridium botulinum E3 str. A... 95 1e-17
AY735112_24(AY735112|pid:none) Streptomyces hygroscopicus mannop... 94 1e-17
CP000614_1527(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 94 1e-17
(Q2SVP3) RecName: Full=Nod factor export ATP-binding protein I; ... 94 1e-17
CP000607_847(CP000607|pid:none) Chlorobium phaeovibrioides DSM 2... 94 1e-17
BX571864_60(BX571864|pid:none) Photorhabdus luminescens subsp. l... 94 1e-17
(P94440) RecName: Full=Uncharacterized ABC transporter ATP-bindi... 94 1e-17
AL445066_142(AL445066|pid:none) Thermoplasma acidophilum complet... 94 1e-17
CP000086_2446(CP000086|pid:none) Burkholderia thailandensis E264... 94 1e-17
CU633749_2814(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 94 1e-17
AM747720_312(AM747720|pid:none) Burkholderia cenocepacia J2315 c... 94 2e-17
BA000030_699(BA000030|pid:none) Streptomyces avermitilis MA-4680... 94 2e-17
CP001393_887(CP001393|pid:none) Anaerocellum thermophilum DSM 67... 94 2e-17
CP000682_252(CP000682|pid:none) Metallosphaera sedula DSM 5348, ... 89 2e-17
CP000975_407(CP000975|pid:none) Methylacidiphilum infernorum V4,... 94 2e-17
CP001013_1573(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 94 2e-17
CP000685_1091(CP000685|pid:none) Flavobacterium johnsoniae UW101... 94 2e-17
CP001338_1958(CP001338|pid:none) Candidatus Methanosphaerula pal... 94 2e-17
CP001099_1028(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 94 2e-17
CP001032_1494(CP001032|pid:none) Opitutus terrae PB90-1, complet... 94 2e-17
CP000352_3239(CP000352|pid:none) Ralstonia metallidurans CH34, c... 94 2e-17
CP000860_1149(CP000860|pid:none) Candidatus Desulforudis audaxvi... 93 2e-17
CP001056_3351(CP001056|pid:none) Clostridium botulinum B str. Ek... 93 3e-17
CP000868_1634(CP000868|pid:none) Burkholderia multivorans ATCC 1... 93 3e-17
CP000909_3537(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 93 3e-17
FM204883_1547(FM204883|pid:none) Streptococcus equi subsp. equi ... 93 3e-17
CP000450_2421(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 93 3e-17
CU694391_87(CU694391|pid:none) Ralstonia solanacearum strain Mol... 93 3e-17
CP000939_2064(CP000939|pid:none) Clostridium botulinum B1 str. O... 93 3e-17
CP000084_198(CP000084|pid:none) Candidatus Pelagibacter ubique H... 93 3e-17
AP009385_1569(AP009385|pid:none) Burkholderia multivorans ATCC 1... 93 3e-17
AE017180_12(AE017180|pid:none) Geobacter sulfurreducens PCA, com... 93 3e-17
CU914168_2717(CU914168|pid:none) Ralstonia solanacearum strain I... 93 3e-17
AM260479_3337(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 93 3e-17
CP000148_649(CP000148|pid:none) Geobacter metallireducens GS-15,... 93 4e-17
CP001099_1822(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 93 4e-17
AL646052_2954(AL646052|pid:none) Ralstonia solanacearum GMI1000 ... 93 4e-17
CP000728_3331(CP000728|pid:none) Clostridium botulinum F str. La... 93 4e-17
CP000555_826(CP000555|pid:none) Methylibium petroleiphilum PM1, ... 93 4e-17
CP001635_1148(CP001635|pid:none) Variovorax paradoxus S110 chrom... 93 4e-17
AJ871581_1(AJ871581|pid:none) Streptomyces achromogenes subsp. r... 92 5e-17
AE008691_1993(AE008691|pid:none) Thermoanaerobacter tengcongensi... 92 5e-17
AE016877_441(AE016877|pid:none) Bacillus cereus ATCC 14579, comp... 92 5e-17
CP000511_3073(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 92 5e-17
CP000939_3350(CP000939|pid:none) Clostridium botulinum B1 str. O... 92 5e-17
AJ518946_10(AJ518946|pid:none) Sinorhizobium sp. BR816 nodulatio... 92 5e-17
AM114193_2968(AM114193|pid:none) Uncultured methanogenic archaeo... 92 6e-17
AK043744_1(AK043744|pid:none) Mus musculus 10 days neonate corte... 92 6e-17
AM412317_1183(AM412317|pid:none) Clostridium botulinum A str. AT... 92 6e-17
CP000560_201(CP000560|pid:none) Bacillus amyloliquefaciens FZB42... 92 6e-17
CP000378_2669(CP000378|pid:none) Burkholderia cenocepacia AU 105... 92 6e-17
AE016877_3261(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 92 8e-17
AP008937_42(AP008937|pid:none) Lactobacillus fermentum IFO 3956 ... 92 8e-17
CP001176_3288(CP001176|pid:none) Bacillus cereus B4264, complete... 92 8e-17
AP009385_2874(AP009385|pid:none) Burkholderia multivorans ATCC 1... 92 8e-17
CP000728_1169(CP000728|pid:none) Clostridium botulinum F str. La... 92 8e-17
CP000382_286(CP000382|pid:none) Clostridium novyi NT, complete g... 92 8e-17
CP000458_420(CP000458|pid:none) Burkholderia cenocepacia HI2424 ... 92 8e-17
AM114193_411(AM114193|pid:none) Uncultured methanogenic archaeon... 92 8e-17
CP001130_1469(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, c... 90 9e-17
CT573071_2269(CT573071|pid:none) Kuenenia stuttgartiensis genome... 91 1e-16
CP000089_4127(CP000089|pid:none) Dechloromonas aromatica RCB, co... 91 1e-16
(Q63TX3) RecName: Full=Nod factor export ATP-binding protein I; ... 91 1e-16
CP000316_788(CP000316|pid:none) Polaromonas sp. JS666, complete ... 91 1e-16
(Q3JSQ0) RecName: Full=Nod factor export ATP-binding protein I; ... 91 1e-16
AE000666_1453(AE000666|pid:none) Methanothermobacter thermautotr... 91 1e-16
CP000449_2621(CP000449|pid:none) Maricaulis maris MCS10, complet... 91 1e-16
CP001348_294(CP001348|pid:none) Clostridium cellulolyticum H10, ... 91 1e-16
CP001581_2200(CP001581|pid:none) Clostridium botulinum A2 str. K... 91 1e-16
CP000151_337(CP000151|pid:none) Burkholderia sp. 383 chromosome ... 91 1e-16
CP001408_1853(CP001408|pid:none) Burkholderia pseudomallei MSHR3... 91 1e-16
BA000030_5968(BA000030|pid:none) Streptomyces avermitilis MA-468... 91 1e-16
CP000568_1404(CP000568|pid:none) Clostridium thermocellum ATCC 2... 91 1e-16
BA000045_436(BA000045|pid:none) Gloeobacter violaceus PCC 7421 D... 91 2e-16
CP000127_2048(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 91 2e-16
AY029295_1(AY029295|pid:none) Rhizobium tropici NodI (nodI), Nod... 91 2e-16
CP001392_712(CP001392|pid:none) Diaphorobacter sp. TPSY, complet... 91 2e-16
CP000922_1962(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 91 2e-16
AP008957_4439(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 91 2e-16
CP000482_2024(CP000482|pid:none) Pelobacter propionicus DSM 2379... 91 2e-16
CU207211_2912(CU207211|pid:none) Herminiimonas arsenicoxydans ch... 91 2e-16
CP000885_75(CP000885|pid:none) Clostridium phytofermentans ISDg,... 89 2e-16
(P23703) RecName: Full=Nod factor export ATP-binding protein I; ... 90 2e-16
CP000151_1546(CP000151|pid:none) Burkholderia sp. 383 chromosome... 90 2e-16
AL672113_3(AL672113|pid:none) Mesorhizobium loti R7A symbiosis i... 90 2e-16
CP000682_865(CP000682|pid:none) Metallosphaera sedula DSM 5348, ... 90 2e-16
CP000086_2942(CP000086|pid:none) Burkholderia thailandensis E264... 90 2e-16
(Q39GT7) RecName: Full=Nod factor export ATP-binding protein I; ... 90 2e-16
AM286415_2749(AM286415|pid:none) Yersinia enterocolitica subsp. ... 90 2e-16
AM180355_1310(AM180355|pid:none) Clostridium difficile 630 compl... 90 2e-16
BA000001_848(BA000001|pid:none) Pyrococcus horikoshii OT3 DNA, c... 90 2e-16
CP000958_1565(CP000958|pid:none) Burkholderia cenocepacia MC0-3 ... 90 2e-16
CP001083_2250(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 90 2e-16
(Q1BWI2) RecName: Full=Nod factor export ATP-binding protein I; ... 90 2e-16
AP009049_2022(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 90 2e-16
AD1169(AD1169) ABC transporter (ATP-binding protein) lmo0756 [im... 90 2e-16
CP000539_743(CP000539|pid:none) Acidovorax sp. JS42, complete ge... 90 2e-16
CP000673_2248(CP000673|pid:none) Clostridium kluyveri DSM 555, c... 90 2e-16
CR522870_1837(CR522870|pid:none) Desulfotalea psychrophila LSv54... 90 3e-16
B83912(B83912) ABC transporter (ATP-binding protein) (daunorubic... 90 3e-16
CP001145_24(CP001145|pid:none) Coprothermobacter proteolyticus D... 90 3e-16
CP001025_345(CP001025|pid:none) Burkholderia ambifaria MC40-6 ch... 90 3e-16
AE000666_1338(AE000666|pid:none) Methanothermobacter thermautotr... 90 3e-16
AM747720_1641(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 90 3e-16
AP011115_320(AP011115|pid:none) Rhodococcus opacus B4 DNA, compl... 89 4e-16
CP000613_2484(CP000613|pid:none) Rhodospirillum centenum SW, com... 89 4e-16
CP001341_2973(CP001341|pid:none) Arthrobacter chlorophenolicus A... 89 4e-16
AE014133_216(AE014133|pid:none) Streptococcus mutans UA159, comp... 89 4e-16
CP001581_3559(CP001581|pid:none) Clostridium botulinum A2 str. K... 89 4e-16
CP001107_1817(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 89 4e-16
CP001078_1717(CP001078|pid:none) Clostridium botulinum E3 str. A... 89 4e-16
CP000254_213(CP000254|pid:none) Methanospirillum hungatei JF-1, ... 89 4e-16
CP000284_242(CP000284|pid:none) Methylobacillus flagellatus KT, ... 89 4e-16
CP000962_1240(CP000962|pid:none) Clostridium botulinum A3 str. L... 89 4e-16
CP001515_750(CP001515|pid:none) Bifidobacterium animalis subsp. ... 89 5e-16
AE010299_853(AE010299|pid:none) Methanosarcina acetivorans str. ... 89 5e-16
CP001083_3467(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 89 5e-16
CS302416_1(CS302416|pid:none) Sequence 229 from Patent WO2006056... 89 5e-16
CP001083_3474(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 89 5e-16
CP001213_1283(CP001213|pid:none) Bifidobacterium animalis subsp.... 89 5e-16
CP001186_3353(CP001186|pid:none) Bacillus cereus G9842, complete... 89 5e-16
CP001338_1196(CP001338|pid:none) Candidatus Methanosphaerula pal... 89 5e-16
A75083(A75083) ATP-binding transport protein PAB1668 - Pyrococcu... 89 5e-16
CP001124_3240(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 89 5e-16
CP001098_1957(CP001098|pid:none) Halothermothrix orenii H 168, c... 89 5e-16
CP000360_4571(CP000360|pid:none) Acidobacteria bacterium Ellin34... 89 5e-16
AE013598_377(AE013598|pid:none) Xanthomonas oryzae pv. oryzae KA... 89 5e-16
CP000764_433(CP000764|pid:none) Bacillus cereus subsp. cytotoxis... 89 5e-16
CP001472_1557(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 84 5e-16
CP000302_2267(CP000302|pid:none) Shewanella denitrificans OS217,... 89 7e-16
CP000159_1217(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 89 7e-16
(Q9Z3I3) RecName: Full=Nod factor export ATP-binding protein I; ... 89 7e-16
CP001581_1234(CP001581|pid:none) Clostridium botulinum A2 str. K... 89 7e-16
CP000300_359(CP000300|pid:none) Methanococcoides burtonii DSM 62... 89 7e-16
CP001083_1155(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 89 7e-16
CP000230_126(CP000230|pid:none) Rhodospirillum rubrum ATCC 11170... 89 7e-16
AP009153_250(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DNA... 89 7e-16
AE017355_3176(AE017355|pid:none) Bacillus thuringiensis serovar ... 89 7e-16
AE004437_536(AE004437|pid:none) Halobacterium sp. NRC-1, complet... 89 7e-16
CP001186_446(CP001186|pid:none) Bacillus cereus G9842, complete ... 89 7e-16
AP008229_351(AP008229|pid:none) Xanthomonas oryzae pv. oryzae MA... 89 7e-16
BA000035_1017(BA000035|pid:none) Corynebacterium efficiens YS-31... 89 7e-16
CP000431_3766(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 89 7e-16
CP001337_1736(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 89 7e-16
CP000939_969(CP000939|pid:none) Clostridium botulinum B1 str. Ok... 89 7e-16
CP000612_1338(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 89 7e-16
CP001472_1415(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 88 9e-16
EU418619_2(EU418619|pid:none) Pseudomonas stutzeri strain JM300 ... 88 9e-16
AF222753_15(AF222753|pid:none) Bradyrhizobium sp. WM9 nodulation... 88 9e-16
AF143772_31(AF143772|pid:none) Mycobacterium avium strain 2151 g... 88 9e-16
CP000239_2199(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 88 9e-16
AE006641_2919(AE006641|pid:none) Sulfolobus solfataricus P2, com... 88 9e-16
CP000423_1442(CP000423|pid:none) Lactobacillus casei ATCC 334, c... 88 9e-16
CP000386_741(CP000386|pid:none) Rubrobacter xylanophilus DSM 994... 88 9e-16
CP000300_1696(CP000300|pid:none) Methanococcoides burtonii DSM 6... 88 9e-16
CP001581_3566(CP001581|pid:none) Clostridium botulinum A2 str. K... 88 9e-16
CP000939_1187(CP000939|pid:none) Clostridium botulinum B1 str. O... 88 9e-16
AP006618_3463(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 88 1e-15
CP001283_3364(CP001283|pid:none) Bacillus cereus AH820, complete... 88 1e-15
AB490237_4(AB490237|pid:none) Ochrobactrum anthropi nosR, nosZ, ... 88 1e-15
AE017194_4601(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 88 1e-15
AE008384_1994(AE008384|pid:none) Methanosarcina mazei strain Goe... 88 1e-15
CP000227_3140(CP000227|pid:none) Bacillus cereus Q1, complete ge... 88 1e-15
CP000759_1581(CP000759|pid:none) Ochrobactrum anthropi ATCC 4918... 88 1e-15
AC159430_33(AC159430|pid:none) Trypanosoma brucei chromosome 3 c... 88 1e-15
AE003849_2315(AE003849|pid:none) Xylella fastidiosa 9a5c, comple... 88 1e-15
CP000422_1591(CP000422|pid:none) Pediococcus pentosaceus ATCC 25... 88 1e-15
AE016879_495(AE016879|pid:none) Bacillus anthracis str. Ames, co... 88 1e-15
AE017282_2925(AE017282|pid:none) Methylococcus capsulatus str. B... 88 1e-15
CP000254_1479(CP000254|pid:none) Methanospirillum hungatei JF-1,... 88 1e-15
AE016825_437(AE016825|pid:none) Chromobacterium violaceum ATCC 1... 88 1e-15
(Q8GNH6) RecName: Full=Nod factor export ATP-binding protein I; ... 88 1e-15
AP006618_5535(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 87 2e-15
AP009493_4029(AP009493|pid:none) Streptomyces griseus subsp. gri... 87 2e-15
CP000560_3547(CP000560|pid:none) Bacillus amyloliquefaciens FZB4... 87 2e-15
AE000512_1380(AE000512|pid:none) Thermotoga maritima MSB8, compl... 87 2e-15
CP001407_3350(CP001407|pid:none) Bacillus cereus 03BB102, comple... 87 2e-15
CP000485_2927(CP000485|pid:none) Bacillus thuringiensis str. Al ... 87 2e-15
CP000976_722(CP000976|pid:none) Borrelia duttonii Ly, complete g... 87 2e-15
AM114193_2881(AM114193|pid:none) Uncultured methanogenic archaeo... 87 2e-15
CP001111_3867(CP001111|pid:none) Stenotrophomonas maltophilia R5... 87 2e-15
CP001339_1913(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, ... 87 2e-15
CP001083_2343(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 87 2e-15
CP001398_838(CP001398|pid:none) Thermococcus gammatolerans EJ3, ... 87 2e-15
CP000557_844(CP000557|pid:none) Geobacillus thermodenitrificans ... 87 2e-15
AE016958_1238(AE016958|pid:none) Mycobacterium avium subsp. para... 87 2e-15
BA000023_1920(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 87 2e-15
AL954747_2381(AL954747|pid:none) Nitrosomonas europaea ATCC 1971... 87 2e-15
CP000568_812(CP000568|pid:none) Clostridium thermocellum ATCC 27... 87 2e-15
CP000048_726(CP000048|pid:none) Borrelia hermsii DAH, complete g... 87 2e-15
CP000962_662(CP000962|pid:none) Clostridium botulinum A3 str. Lo... 87 2e-15
FM177140_1698(FM177140|pid:none) Lactobacillus casei BL23 comple... 87 2e-15
CP000927_73(CP000927|pid:none) Caulobacter sp. K31, complete gen... 87 2e-15
CP000360_2793(CP000360|pid:none) Acidobacteria bacterium Ellin34... 87 2e-15
CP000473_837(CP000473|pid:none) Solibacter usitatus Ellin6076, c... 87 2e-15
AF125999_22(AF125999|pid:none) Mycobacterium avium glycopeptidol... 87 2e-15
CP001083_939(CP001083|pid:none) Clostridium botulinum Ba4 str. 6... 87 2e-15
AE014295_1595(AE014295|pid:none) Bifidobacterium longum NCC2705,... 87 2e-15
CR936257_598(CR936257|pid:none) Natronomonas pharaonis DSM 2160 ... 87 2e-15
CP000254_1417(CP000254|pid:none) Methanospirillum hungatei JF-1,... 87 2e-15
BA000001_944(BA000001|pid:none) Pyrococcus horikoshii OT3 DNA, c... 87 2e-15
CP000360_2216(CP000360|pid:none) Acidobacteria bacterium Ellin34... 87 3e-15
CP001337_353(CP001337|pid:none) Chloroflexus aggregans DSM 9485,... 87 3e-15
CP001628_437(CP001628|pid:none) Micrococcus luteus NCTC 2665, co... 87 3e-15
CP000804_3845(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 87 3e-15
BA000028_1071(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 87 3e-15
CP000382_420(CP000382|pid:none) Clostridium novyi NT, complete g... 87 3e-15
AE001437_282(AE001437|pid:none) Clostridium acetobutylicum ATCC ... 87 3e-15
AF250767_2(AF250767|pid:none) Uncultured bacterium pCosFS1 ElsD ... 87 3e-15
CR954246_1873(CR954246|pid:none) Pseudoalteromonas haloplanktis ... 87 3e-15
CP001056_1703(CP001056|pid:none) Clostridium botulinum B str. Ek... 87 3e-15
AB033992_2(AB033992|pid:none) Streptomyces kasugaensis ORFJ, kas... 87 3e-15
AE016879_4382(AE016879|pid:none) Bacillus anthracis str. Ames, c... 86 3e-15
CP000227_4215(CP000227|pid:none) Bacillus cereus Q1, complete ge... 86 3e-15
CP000740_974(CP000740|pid:none) Sinorhizobium medicae WSM419 pla... 86 3e-15
CP000027_1295(CP000027|pid:none) Dehalococcoides ethenogenes 195... 86 3e-15
AE017355_4201(AE017355|pid:none) Bacillus thuringiensis serovar ... 86 3e-15
CP000820_4011(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 86 3e-15
AP008955_5030(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 86 3e-15
CP000447_1682(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 86 3e-15
AX196016_1(AX196016|pid:none) Sequence 88 from Patent WO0151639. 86 3e-15
CP000967_4748(CP000967|pid:none) Xanthomonas oryzae pv. oryzae P... 86 3e-15
CP001365_2609(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 86 3e-15
CP001140_494(CP001140|pid:none) Desulfurococcus kamchatkensis 12... 86 3e-15
J03685_4(J03685|pid:none) B.japonicum nodulation protein (nodC (... 86 3e-15
AE009950_1249(AE009950|pid:none) Pyrococcus furiosus DSM 3638, c... 86 3e-15
CP001147_1535(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 82 4e-15
CP001034_893(CP001034|pid:none) Natranaerobius thermophilus JW/N... 86 4e-15
AE016877_1600(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 86 4e-15
AE009442_1300(AE009442|pid:none) Xylella fastidiosa Temecula1, c... 86 4e-15
CP001275_184(CP001275|pid:none) Thermomicrobium roseum DSM 5159,... 86 4e-15
CP001348_2462(CP001348|pid:none) Clostridium cellulolyticum H10,... 86 4e-15
AP006878_2282(AP006878|pid:none) Thermococcus kodakarensis KOD1 ... 86 4e-15
CP000702_1366(CP000702|pid:none) Thermotoga petrophila RKU-1, co... 86 4e-15
CP000077_934(CP000077|pid:none) Sulfolobus acidocaldarius DSM 63... 86 4e-15
AP006840_547(AP006840|pid:none) Symbiobacterium thermophilum IAM... 86 4e-15
CP000780_1013(CP000780|pid:none) Candidatus Methanoregula boonei... 86 4e-15
CP001503_1791(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 86 4e-15
CP000155_4846(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 86 4e-15
(O52618) RecName: Full=Nod factor export ATP-binding protein I; ... 86 4e-15
A97336(A97336) Na+ ABC transporter (ATP-binding protein), NATA C... 86 4e-15
AE017282_1401(AE017282|pid:none) Methylococcus capsulatus str. B... 86 4e-15
CP000127_1697(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 86 4e-15
AE006469_476(AE006469|pid:none) Sinorhizobium meliloti 1021 plas... 86 4e-15
CP000485_3884(CP000485|pid:none) Bacillus thuringiensis str. Al ... 86 4e-15
AM711867_1307(AM711867|pid:none) Clavibacter michiganensis subsp... 86 4e-15
CP000943_2694(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 86 4e-15
CP000388_356(CP000388|pid:none) Pseudoalteromonas atlantica T6c,... 86 4e-15
CU633751_308(CU633751|pid:none) Cupriavidus taiwanensis str. LMG... 86 6e-15
CP000116_1894(CP000116|pid:none) Thiobacillus denitrificans ATCC... 86 6e-15
AE009950_583(AE009950|pid:none) Pyrococcus furiosus DSM 3638, co... 86 6e-15
CP000854_3219(CP000854|pid:none) Mycobacterium marinum M, comple... 86 6e-15
AJ937765_26(AJ937765|pid:none) Uncultured candidate division OP8... 86 6e-15
BX571856_2406(BX571856|pid:none) Staphylococcus aureus subsp. au... 86 6e-15
CP000891_1579(CP000891|pid:none) Shewanella baltica OS195, compl... 86 6e-15

>(Q8T6J1) RecName: Full=ABC transporter A family member 6; AltName:
Full=ABC transporter ABCA.6;
&AF465308_1(AF465308|pid:none)
Length = 1631

Score = 327 bits (838), Expect = 9e-88
Identities = 174/366 (47%), Positives = 246/366 (67%), Gaps = 11/366 (3%)
Frame = +1

Query: 1 NKYGVGYLLTCSKSL-NTIDQFNVDQVTQFIRDQIPDVTVLSNAGSEISFRLPTASLPVF 177
N++G GYLLTC+K L N + FN +QV++FI++ IP ++L+++G+E+S+RLPT SL F
Sbjct: 713 NRFGQGYLLTCNKKLENASNGFNTNQVSEFIKNFIPGASILTDSGAELSYRLPTESLSNF 772

Query: 178 SKFFKDFDENLSNFHIDSYGISVTTLEEVFLKIGTDIDTDALSIADGNGNDDE------L 339
+FF +FD NLS F I +YGISVT+LEEVF+ +G + + A+GN ++ L
Sbjct: 773 PQFFTEFDLNLSKFSIQTYGISVTSLEEVFISLGQEDSKKLNNNANGNNEFNKQNEMESL 832

Query: 340 KRSIGVSSTGIKSKQQLKALLIKRVKTSSKDFKAFXXXXXXXXXXXXXXXXXFKEVDNE- 516
K +I S GI QQ K LLIKR++ S KD ++F +K ++++
Sbjct: 833 KLAIATPSDGINQIQQFKGLLIKRIQQSKKDARSFFLSIILPMALIIGSIILYKSMNDQK 892

Query: 517 -VIFYNNSTEPLTFSLLQQYGKNDIVPIQLAGTTSEFDFNKFLSNSPYFNQFQYLNNSIN 693
V+FYNNST+PLT SL ++ + + + +E +++ +NSPYFN+F+Y+N SIN
Sbjct: 893 QVLFYNNSTQPLTMSLSIYTDSDNTINVPMQLLNNELEWSNLFNNSPYFNKFKYINESIN 952

Query: 694 FNQYLINNYKQSSGSINFTI-PLSSSLINNTTKV-ISYNSLFNFNYIHSWPVHVNLINDA 867
FN YLI+NYK S G+INFT P+S NN SY + +N +YIHS+P+HVNLINDA
Sbjct: 953 FNDYLIDNYKLSIGAINFTNQPISIDDNNNGQSTNCSYIAYYNSDYIHSFPIHVNLINDA 1012

Query: 868 LLRNHNGIGIECTSLPFDHILTSFQKASQGMNIQSIVYFIVIMMAGFSLMAGSFAGSISQ 1047
LLR I I TS+PFDHILT+F+ +S +N +I+YF+ I+MAGFSLMAGSFAGSI+Q
Sbjct: 1013 LLRKFKNISISVTSMPFDHILTAFEISSSDINASAIIYFVFILMAGFSLMAGSFAGSIAQ 1072

Query: 1048 ERTNRI 1065
ERTNR+
Sbjct: 1073 ERTNRV 1078

Score = 252 bits (643), Expect = 4e-65
Identities = 123/198 (62%), Positives = 164/198 (82%)
Frame = +3

Query: 1092 VSMLAGDILPTSGQITINGHDLVTDRAQALRGVSVCPQFDALITLLTAREQLSLYCAIKG 1271
+SML+G+I+P+SG+I+ING+D++T+R +AL +S+ QFDALI+LL+ARE L L+ IKG
Sbjct: 1357 LSMLSGEIVPSSGEISINGYDVITNREKALGNISMVFQFDALISLLSAREHLWLFSRIKG 1416

Query: 1272 VPDDKISLVVEAFIKMMDLGKIANSNTGGYSGGNKRKVSLSIAMLGNPSVVLIDEASSGC 1451
+ + +I VEAFIKM+DL +IANS GGYSGGNKRKVSLS+AMLGNPSV +DE S GC
Sbjct: 1417 IKESQIENCVEAFIKMVDLTRIANSGCGGYSGGNKRKVSLSMAMLGNPSVCFLDEISCGC 1476

Query: 1452 DPIIRYRQCQVISELGKNKVIILTSHSMSEIQALCSRMTIMRDGQFKCLGSTQHIKSKFG 1631
D ++R + VISELGK+K IILTSHSMSE++ALCSR+TIM++G++ CL + Q +K++FG
Sbjct: 1477 DAVVRRQLWDVISELGKDKSIILTSHSMSEVEALCSRITIMKEGKYTCLNTIQGVKNRFG 1536

Query: 1632 AGYSVEVKFKKSCLEVGI 1685
AGYS++VKFKK LE GI
Sbjct: 1537 AGYSIDVKFKKEYLETGI 1554

Score = 121 bits (303), Expect = 1e-25
Identities = 63/183 (34%), Positives = 99/183 (54%)
Frame = +3

Query: 1092 VSMLAGDILPTSGQITINGHDLVTDRAQALRGVSVCPQFDALITLLTAREQLSLYCAIKG 1271
+ ML G I PTSG I G+D+ + ++ + C Q D + + LT E L +Y ++KG
Sbjct: 537 IGMLTGLISPTSGSAFIRGYDITSQMSKIRPYIGCCLQTDIIWSQLTVLEHLVIYASLKG 596

Query: 1272 VPDDKISLVVEAFIKMMDLGKIANSNTGGYSGGNKRKVSLSIAMLGNPSVVLIDEASSGC 1451
V I E + L + N+ G SGG KRK+ L IA +G ++ +DE +SG
Sbjct: 597 VEGRNIQREAERMATEVGLAEKMNAPAGSLSGGQKRKLCLGIAFIGRSKIIFLDEVTSGM 656

Query: 1452 DPIIRYRQCQVISELGKNKVIILTSHSMSEIQALCSRMTIMRDGQFKCLGSTQHIKSKFG 1631
DP+ R + + + K K IILT+H + E L R+ I+ G+ +C G++ +K++FG
Sbjct: 657 DPVSRRQVWDFLLKYKKGKTIILTTHYLEEADYLGDRIAIISQGKLRCDGTSLFLKNRFG 716

Query: 1632 AGY 1640
GY
Sbjct: 717 QGY 719

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,416,072,637
Number of extensions: 45095965
Number of successful extensions: 171461
Number of sequences better than 10.0: 23143
Number of HSP's gapped: 164107
Number of HSP's successfully gapped: 24874
Length of query: 601
Length of database: 1,051,180,864
Length adjustment: 134
Effective length of query: 467
Effective length of database: 617,481,958
Effective search space: 288364074386
Effective search space used: 288364074386
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.89 gvh: 0.50 alm: 0.15 top: 0.07 tms: 0.13 mit: 0.29 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 1.00 m3b: 0.00 m_ : 0.00

32.0 %: endoplasmic reticulum
28.0 %: mitochondrial
12.0 %: plasma membrane
8.0 %: extracellular, including cell wall
4.0 %: vacuolar
4.0 %: Golgi
4.0 %: nuclear
4.0 %: vesicles of secretory system
4.0 %: cytoplasmic

>> prediction for Contig-U11922-1 is end

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 1
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 1
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0