Contig-U11914-1
Contig ID Contig-U11914-1
Contig update 2002.12.18
Contig sequence
>Contig-U11914-1 (Contig-U11914-1Q) /CSM_Contig/Contig-U11914-1Q.Seq.d
CACTGTTGGCCTACTGGNATTTTTTTTAGAGAATTTGATCCATTGAAAGG
TAAAATTATAGATTCTACATCATCATGTCCAGCAGGCACAAATAATATGG
CAAATGGTGGTTGTCCAACTGTTATGTATCCTGATCTAAATTGTGAATGT
GATAATGGACAATGTTTTGCATGTTTAGATATTGATGAATGTATAAGTGG
TCATAATTGTGTAGCACCAGCATACTGTGTGAATGATTATGCAACATTTT
CTTGTAAATGTCCACCAAATGGTTATACTCCAAATGGAACTGGTTGTGAT
GATATTAATGAATGTAGTTTAGGAAGTCATGATTGTGTAACACCTGCATA
CTGTGTGAATAAAATTGGTTCATTTACATGCGAGTGTCTAAATGGTTATA
CATTATCTTCAAATAGTAAATCATGTGATGATGTCGATGAACGTACTACT
ACTCCAACTATTTGTGGTTCTGCAACATGTATGAATACACAAGGAGGTTA
TAAATGTAATTGTCAAGAAGGTTATATCTATAGTCCGATAACAAGTAGTT
GTTTAGATATTGACGAATGTACTAATCCATNNNNNNNNN----------T
TGGATTTGATGGTCAGGTTTATAAAACTTACCCCATTGAAAAAAGAATGG
ATTTTAAATAGTACTTTTGAAAATGAAATGATATTTGAACAAACCATTTC
ACATGATTCAAATTGTAAAATTATTACTCACTTTCAAGAAATAAAAGATG
AAAAAAAAGCATTTCAATTTGCAAATGAACAATTTTATTTGGAAAAAGGG
TCAATTAAAGTTACAATTAAAGTTACAAAATATGATTATATAAATAATTT
AAATACCTTGGAATTGGAATTAATTTCATCAATTGAAGAACAAGATCAAA
ATAGAAATGATTGTAATAGTAAAGATATCGATATTGAAGATATTAATAGT
CCAGCATCTTCAAAATTTAGTTTTATTAAAATTTCAAAAGATAATAAAAT
ATTTTCTGGTAGATTTTTAAATAAATTATTATCAGATAATAGAGAAACCT
TTTTTTCAACTGAAAATATTAAAGATTTGGAATCAAATTCAATTACAACT
TTATTAAAATTACCACATTTTAATAATGAATGTATTATTGATCCTGATTT
TTCTGTATTATTATCAACTGATTTCAAAGAAAATTGTAAAGAGGATAATA
GAAAATGGGTAATACCGGTTTCAATTGTAATTCCAGTTGTATTCGTAGCT
TCTGCCATAATTTTTATTTCAATAATTTATAAAAAATCAACAACAGTTAA
AATTGGTTTAAAAAAATTTAAATCAATAAAATTAAATTCAATGAAAGGTT
AAGCACAATAAATAAAGTTAAAAAAAAAAAAAAAAAAATTGAAATTATTA
ATTTGTTTCTTTTTTTTTTATAAATCAACCAAAAAAAAAAAAAAAAAAAA
A

Gap gap included
Contig length 1441
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 3998666
End point 4000059
Strand (PLUS/MINUS) PLUS
Number of clones 5
Number of EST 6
Link to clone list U11914
List of clone(s)

est1=CHP833F,1,580
est2=VHK830Z,581,1340
est3=CHP833Z,614,1302
est4=AHB726Z,626,1184
est5=SSH307Z,777,1349
est6=SSD703Z,851,1433
Translated Amino Acid sequence
HCWPTGIFFREFDPLKGKIIDSTSSCPAGTNNMANGGCPTVMYPDLNCECDNGQCFACLD
IDECISGHNCVAPAYCVNDYATFSCKCPPNGYTPNGTGCDDINECSLGSHDCVTPAYCVN
KIGSFTCECLNGYTLSSNSKSCDDVDERTTTPTICGSATCMNTQGGYKCNCQEGYIYSPI
TSSCLDIDECTNPXXX---

---LDLMVRFIKLTPLKKEWILNSTFENEMIFEQTISHDSNCKIITHFQEIKDEKKAFQF
ANEQFYLEKGSIKVTIKVTKYDYINNLNTLELELISSIEEQDQNRNDCNSKDIDIEDINS
PASSKFSFIKISKDNKIFSGRFLNKLLSDNRETFFSTENIKDLESNSITTLLKLPHFNNE
CIIDPDFSVLLSTDFKENCKEDNRKWVIPVSIVIPVVFVASAIIFISIIYKKSTTVKIGL
KKFKSIKLNSMKG*aq*iklkkkkkklkllicffffykstkkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
HCWPTGIFFREFDPLKGKIIDSTSSCPAGTNNMANGGCPTVMYPDLNCECDNGQCFACLD
IDECISGHNCVAPAYCVNDYATFSCKCPPNGYTPNGTGCDDINECSLGSHDCVTPAYCVN
KIGSFTCECLNGYTLSSNSKSCDDVDERTTTPTICGSATCMNTQGGYKCNCQEGYIYSPI
TSSCLDIDECTNPXXX---

---LDLMVRFIKLTPLKKEWILNSTFENEMIFEQTISHDSNCKIITHFQEIKDEKKAFQF
ANEQFYLEKGSIKVTIKVTKYDYINNLNTLELELISSIEEQDQNRNDCNSKDIDIEDINS
PASSKFSFIKISKDNKIFSGRFLNKLLSDNRETFFSTENIKDLESNSITTLLKLPHFNNE
CIIDPDFSVLLSTDFKENCKEDNRKWVIPVSIVIPVVFVASAIIFISIIYKKSTTVKIGL
KKFKSIKLNSMKG*aq*iklkkkkkklkllicffffykstkkkkkkk

Frame B:
tvgllxfflenlih*kvkl*ilhhhvqqaqiiwqmvvvqllcili*ivnvimdnvlhv*i
lmnv*vviiv*hqhtv*mimqhflvnvhqmvilqmelvvmilmnvv*evmiv*hlhtv*i
klvhlhasv*mvihylqivnhvmmsmnvlllqlfvvlqhv*ihkevinvivkkvisivr*
qvvv*iltnvlihxxx---

---wi*wsgl*nlph*kkngf*ivllkmk*ylnkpfhmiqivkllltfkk*kmkkkhfnl
qmnnfiwkkgqlklqlklqnmii*ii*ipwnwn*fhqlknkikiemivivkisilkiliv
qhlqnlvllkfqkiikyflvdf*inyyqiiekpffqlkilkiwnqiqlqly*nyhilimn
vlliliflyyyqliskkivkriieng*yrfql*fqlys*llp*flfq*fiknqqqlklv*
knlnq*n*iq*kvkhnk*s*kkkkkn*ny*fvsfffinqpkkkkkk

Frame C:
llaywxff*ri*sier*nyrfyiimssrhk*ygkwwlsncyvs*skl*m**wtmfcmfry
**mykws*lcstsilce*lcnifl*mstkwlyskwnwl**y**m*frks*lcntcilce*
nwfiymrvskwlyiifk**im**cr*tyyysnylwfcnmyeytrrl*m*lsrrlyl*sdn
k*lfry*rmy*sxxx---

---gfdgqvyktypiekrmdfk*yf*k*ndi*tnhft*fkl*nyyslsrnkr*kksisic
k*tilfgkrvn*syn*syki*lyk*fkylgiginfin*rtrsk*k*l***ryry*ry**s
sifki*fy*nfkr**nifw*ifk*iiir**rnlffn*ky*rfgikfnynfikittf***m
yy*s*ffciiin*fqrkl*rg**kmgntgfncnsscirsfchnfyfnnl*kinns*nwfk
ki*inkikfnerlstinkvkkkkkkieiinlflffl*inqkkkkkk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11914-1 (Contig-U11914-1Q)
/CSM_Contig/Contig-U11914-1Q.Seq.d
(1451 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11914-1 (Contig-U11914-1Q) /CSM_Contig/Conti... 1259 0.0
Contig-U10835-1 (Contig-U10835-1Q) /CSM_Contig/Conti... 60 7e-09
Contig-U12395-1 (Contig-U12395-1Q) /CSM_Contig/Conti... 56 1e-07
Contig-U11534-1 (Contig-U11534-1Q) /CSM_Contig/Conti... 48 3e-05
Contig-U14850-1 (Contig-U14850-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U12483-1 (Contig-U12483-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U12416-1 (Contig-U12416-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U10137-1 (Contig-U10137-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U09371-1 (Contig-U09371-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U05092-1 (Contig-U05092-1Q) /CSM_Contig/Conti... 42 0.002

>Contig-U11914-1 (Contig-U11914-1Q) /CSM_Contig/Contig-U11914-1Q.Seq.d
Length = 1451

Score = 1259 bits (635), Expect = 0.0
Identities = 665/680 (97%)
Strand = Plus / Plus


Query: 600 ttggatttgatggtcaggtttataaaacttaccccattgaaaaaagaatggattttaaat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ttggatttgatggtcaggtttataaaacttaccccattgaaaaaagaatggattttaaat 659


Query: 660 agtacttttgaaaatgaaatgatatttgaacaaaccatttcacatgattcaaattgtaaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 agtacttttgaaaatgaaatgatatttgaacaaaccatttcacatgattcaaattgtaaa 719


Query: 720 attattactcactttcaagaaataaaagatgnnnnnnnngcatttcaatttgcaaatgaa 779
||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 720 attattactcactttcaagaaataaaagatgaaaaaaaagcatttcaatttgcaaatgaa 779


Query: 780 caattttatttggaaaaagggtcaattaaagttacaattaaagttacaaaatatgattat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 caattttatttggaaaaagggtcaattaaagttacaattaaagttacaaaatatgattat 839


Query: 840 ataaataatttaaataccttggaattggaattaatttcatcaattgaagaacaagatcaa 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 ataaataatttaaataccttggaattggaattaatttcatcaattgaagaacaagatcaa 899


Query: 900 aatagaaatgattgtaatagtaaagatatcgatattgaagatattaatagtccagcatct 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 aatagaaatgattgtaatagtaaagatatcgatattgaagatattaatagtccagcatct 959


Query: 960 tcaaaatttagttttattaaaatttcaaaagataataaaatattttctggtagattttta 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 tcaaaatttagttttattaaaatttcaaaagataataaaatattttctggtagattttta 1019


Query: 1020 aataaattattatcagataatagagaaaccnnnnnnncaactgaaaatattaaagatttg 1079
|||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1020 aataaattattatcagataatagagaaacctttttttcaactgaaaatattaaagatttg 1079


Query: 1080 gaatcaaattcaattacaactttattaaaattaccacattttaataatgaatgtattatt 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 gaatcaaattcaattacaactttattaaaattaccacattttaataatgaatgtattatt 1139


Query: 1140 gatcctgatttttctgtattattatcaactgatttcaaagaaaattgtaaagaggataat 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 gatcctgatttttctgtattattatcaactgatttcaaagaaaattgtaaagaggataat 1199


Query: 1200 agaaaatgggtaataccggtttcaattgtaattccagttgtattcgtagcttctgccata 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 agaaaatgggtaataccggtttcaattgtaattccagttgtattcgtagcttctgccata 1259


Query: 1260 atttttatttcaataattta 1279
||||||||||||||||||||
Sbjct: 1260 atttttatttcaataattta 1279


Score = 1096 bits (553), Expect = 0.0
Identities = 572/580 (98%)
Strand = Plus / Plus


Query: 1 cactgttggcctactggnannnnnnnnagagaatttgatccattgaaaggtaaaattata 60
||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 cactgttggcctactggnattttttttagagaatttgatccattgaaaggtaaaattata 60


Query: 61 gattctacatcatcatgtccagcaggcacaaataatatggcaaatggtggttgtccaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gattctacatcatcatgtccagcaggcacaaataatatggcaaatggtggttgtccaact 120


Query: 121 gttatgtatcctgatctaaattgtgaatgtgataatggacaatgttttgcatgtttagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttatgtatcctgatctaaattgtgaatgtgataatggacaatgttttgcatgtttagat 180


Query: 181 attgatgaatgtataagtggtcataattgtgtagcaccagcatactgtgtgaatgattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attgatgaatgtataagtggtcataattgtgtagcaccagcatactgtgtgaatgattat 240


Query: 241 gcaacattttcttgtaaatgtccaccaaatggttatactccaaatggaactggttgtgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcaacattttcttgtaaatgtccaccaaatggttatactccaaatggaactggttgtgat 300


Query: 301 gatattaatgaatgtagtttaggaagtcatgattgtgtaacacctgcatactgtgtgaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatattaatgaatgtagtttaggaagtcatgattgtgtaacacctgcatactgtgtgaat 360


Query: 361 aaaattggttcatttacatgcgagtgtctaaatggttatacattatcttcaaatagtaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaaattggttcatttacatgcgagtgtctaaatggttatacattatcttcaaatagtaaa 420


Query: 421 tcatgtgatgatgtcgatgaacgtactactactccaactatttgtggttctgcaacatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcatgtgatgatgtcgatgaacgtactactactccaactatttgtggttctgcaacatgt 480


Query: 481 atgaatacacaaggaggttataaatgtaattgtcaagaaggttatatctatagtccgata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgaatacacaaggaggttataaatgtaattgtcaagaaggttatatctatagtccgata 540


Query: 541 acaagtagttgtttagatattgacgaatgtactaatccat 580
||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acaagtagttgtttagatattgacgaatgtactaatccat 580


Score = 83.8 bits (42), Expect = 5e-16
Identities = 42/42 (100%)
Strand = Plus / Plus


Query: 1389 ttgaaattattaatttgtttcttttttttttataaatcaacc 1430
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1389 ttgaaattattaatttgtttcttttttttttataaatcaacc 1430


>Contig-U10835-1 (Contig-U10835-1Q) /CSM_Contig/Contig-U10835-1Q.Seq.d
Length = 1506

Score = 60.0 bits (30), Expect = 7e-09
Identities = 48/54 (88%)
Strand = Plus / Plus


Query: 1103 attaaaattaccacattttaataatgaatgtattattgatcctgatttttctgt 1156
|||||| |||||||||| ||| ||||||||| | |||||||||||||| |||||
Sbjct: 414 attaaatttaccacattgtaaaaatgaatgtttaattgatcctgatttctctgt 467


>Contig-U12395-1 (Contig-U12395-1Q) /CSM_Contig/Contig-U12395-1Q.Seq.d
Length = 1386

Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus


Query: 986 aaaagataataaaatattttctggtagatttttaaataaattattatcagat 1037
|||| |||||||||| ||| | |||||||| ||||||||||||||||||||
Sbjct: 1080 aaaaaataataaaatctttacaggtagattcataaataaattattatcagat 1131


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 36,612
Number of Sequences: 6905
Number of extensions: 36612
Number of successful extensions: 5331
Number of sequences better than 10.0: 1026
length of query: 1451
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1435
effective length of database: 5,564,391
effective search space: 7984901085
effective search space used: 7984901085
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.27
Homology vs DNA
Query= Contig-U11914-1 (Contig-U11914-1Q) /CSM_Contig/Contig-U11914-1Q.Seq.d
(1451 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ370193) Dictyostelium discoideum cDNA clone:ddc53b10, 5' ... 1096 0.0 2
(BJ443263) Dictyostelium discoideum cDNA clone:ddv52l08, 3' ... 422 0.0 4
(BJ383498) Dictyostelium discoideum cDNA clone:ddc53b10, 3' ... 422 0.0 4
(BJ348759) Dictyostelium discoideum cDNA clone:dda34d07, 3' ... 402 0.0 4
(AU038127) Dictyostelium discoideum slug cDNA, clone SSH307. 422 0.0 3
(AU037492) Dictyostelium discoideum slug cDNA, clone SSD703. 422 e-175 4
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 60 2e-04 1
(AX392735) Sequence 25 from Patent WO0212526. 44 4e-04 6
(AR707082) Sequence 25 from patent US 6933145. 44 4e-04 6
(AM453772) Vitis vinifera contig VV78X076879.7, whole genome... 46 7e-04 3
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 44 0.001 11
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 34 0.002 17
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 34 0.003 12
(BJ383981) Dictyostelium discoideum cDNA clone:ddc47i20, 3' ... 54 0.005 2
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 34 0.009 8
(BV722885) MulSSR 202B MULSSR microsatellite sequence Morus ... 54 0.015 1
(BV722884) MulSSR 202A MULSSR microsatellite sequence Morus ... 54 0.015 1
(AC166339) Mus musculus chromosome 8, clone RP23-274G17, com... 54 0.015 1
(AC117804) Mus musculus chromosome 8, clone RP24-565N9, comp... 54 0.015 1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 34 0.015 14
(BJ357746) Dictyostelium discoideum cDNA clone:dda64h13, 3' ... 42 0.053 3
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 34 0.054 12
(AL714031) Zebrafish DNA sequence from clone BUSM1-60J23 in ... 42 0.055 7
(BJ444292) Dictyostelium discoideum cDNA clone:ddv55l20, 3' ... 42 0.057 3
(AC020039) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 48 0.060 2
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 36 0.069 12
(AX344564) Sequence 15 from Patent WO0200932. 38 0.079 12
(AE014843) Plasmodium falciparum 3D7 chromosome 11 section 8... 38 0.082 12
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 38 0.087 11
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 38 0.14 2
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 46 0.15 10
(DD010735) Diagnosis of known genetic Parameters within the ... 40 0.19 14
(AC141659) Apis mellifera clone CH224-54J24, WORKING DRAFT S... 34 0.19 7
(AC196668) Rhesus Macaque BAC CH250-338N21 () complete sequ... 46 0.21 2
(AC112621) Rattus norvegicus clone CH230-33L3, *** SEQUENCIN... 50 0.24 1
(AC106479) Rattus norvegicus clone CH230-169D6, WORKING DRAF... 50 0.24 1
(AC170727) Atelerix albiventris clone LB4-501D11, WORKING DR... 50 0.24 1
(AC170718) Atelerix albiventris clone LB4-33L18, WORKING DRA... 50 0.24 1
(AM683235) Entamoeba terrapinae GSS, clone terra251h03.q1k. 50 0.24 1
(AM680341) Entamoeba terrapinae GSS, clone terra176f05.q1k. 50 0.24 1
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 34 0.25 11
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 34 0.35 11
(BE106157) UI-R-BX0-ase-g-01-0-UI.s1 UI-R-BX0 Rattus norvegi... 44 0.41 2
(AC008323) Drosophila melanogaster, chromosome 2L, region 24... 48 0.41 3
(AC190199) Pan troglodytes BAC clone CH251-610M6 from chromo... 44 0.44 6
(AC207598) Pan troglodytes BAC clone CH251-404N5 from chromo... 44 0.48 4
(AC005506) Plasmodium falciparum chromosome 12 clone 3D7, **... 36 0.49 10
(CR932964) Medicago truncatula chromosome 5 clone mte1-60l18... 34 0.51 6
(AC225471) Medicago truncatula clone mth2-176h19, WORKING DR... 34 0.53 2
(AC150244) Medicago truncatula chromosome 7 clone mth2-180p1... 36 0.63 7
(EF456318) Pachypodium lamerei trnK gene, intron; and matura... 34 0.65 2
(EF456300) Galactophora schomburgkiana trnK gene, intron; an... 34 0.65 2
(EF456304) Angadenia sagraei trnK gene, intron; and maturase... 34 0.65 2
(EF456274) Aganosma cymosa trnK gene, intron; and maturase K... 34 0.65 2
(DQ522650) Pachypodium lamerei maturase K-like (matK) gene, ... 34 0.65 2
(DQ522649) Pachypodium geayi maturase K-like (matK) gene, co... 34 0.65 2
(EF456262) Angadenia berteroi trnK gene, intron; and maturas... 34 0.66 2
(EV258563) MTYDL76TF JCVI-MT1 Medicago truncatula cDNA 5', m... 34 0.67 2
(AC115581) Dictyostelium discoideum chromosome 2 map complem... 34 0.68 7
(CD712529) VVB017C09_403405 An expressed sequence tag databa... 38 0.68 2
(EK185627) 1095458144818 Global-Ocean-Sampling_GS-31-01-01-1... 34 0.69 3
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 32 0.70 13
(CU024897) M.truncatula DNA sequence from clone MTH2-2A23 on... 36 0.71 8
(AC177440) Strongylocentrotus purpuratus clone R3-5D22, WORK... 36 0.77 6
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s... 36 0.78 14
(AL929356) Plasmodium falciparum strain 3D7, chromosome 9; s... 32 0.84 11
(BX538351) Cryptosporidium parvum chromosome 6, complete seq... 38 0.85 10
(BJ394106) Dictyostelium discoideum cDNA clone:dds33g19, 5' ... 38 0.85 2
(BH044361) RPCI-24-330E5.TVB RPCI-24 Mus musculus genomic cl... 40 0.85 3
(EJ122002) 1092343376829 Global-Ocean-Sampling_GS-27-01-01-1... 38 0.86 3
(EK171249) 1095458076405 Global-Ocean-Sampling_GS-31-01-01-1... 34 0.92 3
(DE151155) Bombyx mori genomic DNA, Fosmid clone:RO0292-C01_R. 40 0.93 2
(CR847945) Zebrafish DNA sequence from clone DKEY-52L1. 48 0.94 1
(CQ578219) Sequence 5977 from Patent WO0171042. 48 0.94 1
(AE014134) Drosophila melanogaster chromosome 2L, complete s... 48 0.94 1
(AC009751) Drosophila melanogaster, chromosome 2L, region 23... 48 0.94 1
(AB059649) Drosophila melanogaster timeless gene promoter re... 48 0.94 1
(CR627420) Homo sapiens genomic DNA; cDNA DKFZp686I13101 (fr... 48 0.94 1
(AC012557) Homo sapiens 3 BAC RP11-245J9 (Roswell Park Cance... 48 0.94 1
(AC109653) Rattus norvegicus clone CH230-164M11, *** SEQUENC... 48 0.94 1
(AC098569) Homo sapiens chromosome 3 clone RP11-572I9, WORKI... 48 0.94 1
(AC092049) Homo sapiens chromosome 3 clone RP11-245J9, WORKI... 48 0.94 1
(AC063925) Homo sapiens chromosome 3 clone RP11-129H12, WORK... 48 0.94 1
(AC197190) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB... 48 0.94 1
(AC007420) Drosophila melanogaster strain y chromosome 2 clo... 48 0.94 1
(EK257740) 1095462024648 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.94 1
(EL926275) NY4ThAmp1_1_B11.g1_A039 NY4 theronts: amplified l... 48 0.94 1
(EB452841) 1099289032069 12-DrosW-std-1P6Kb Drosophila willi... 48 0.94 1
(DC861749) Samia cynthia ricini cDNA, clone: S13A01NGRL0010_... 48 0.94 1
(BJ407013) Dictyostelium discoideum cDNA clone:dds37n03, 3' ... 48 0.94 1
(CP000681) Shewanella putrefaciens CN-32, complete genome. 48 0.94 1
(CP000503) Shewanella sp. W3-18-1, complete genome. 48 0.94 1
(AE014846) Plasmodium falciparum 3D7 chromosome 12, section ... 32 0.96 12
(AC122164) Medicago truncatula clone mth2-24h4, complete seq... 36 1.0 6
(AC129183) Mus musculus BAC clone RP23-350M13 from chromosom... 38 1.0 6
(AL844506) Plasmodium falciparum chromosome 7. 32 1.1 15
(DE318041) Bombyx mori genomic DNA, BAC clone:BES_614_I18. 40 1.1 2
(CP000087) Rickettsia bellii RML369-C, complete genome. 36 1.2 23
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 36 1.3 17
(AL049183) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 34 1.4 11

>(BJ370193) Dictyostelium discoideum cDNA clone:ddc53b10, 5' end,
single read.
Length = 580

Score = 1096 bits (553), Expect(2) = 0.0
Identities = 553/553 (100%)
Strand = Plus / Plus


Query: 28 agagaatttgatccattgaaaggtaaaattatagattctacatcatcatgtccagcaggc 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28 agagaatttgatccattgaaaggtaaaattatagattctacatcatcatgtccagcaggc 87


Query: 88 acaaataatatggcaaatggtggttgtccaactgttatgtatcctgatctaaattgtgaa 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 acaaataatatggcaaatggtggttgtccaactgttatgtatcctgatctaaattgtgaa 147


Query: 148 tgtgataatggacaatgttttgcatgtttagatattgatgaatgtataagtggtcataat 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tgtgataatggacaatgttttgcatgtttagatattgatgaatgtataagtggtcataat 207


Query: 208 tgtgtagcaccagcatactgtgtgaatgattatgcaacattttcttgtaaatgtccacca 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tgtgtagcaccagcatactgtgtgaatgattatgcaacattttcttgtaaatgtccacca 267


Query: 268 aatggttatactccaaatggaactggttgtgatgatattaatgaatgtagtttaggaagt 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aatggttatactccaaatggaactggttgtgatgatattaatgaatgtagtttaggaagt 327


Query: 328 catgattgtgtaacacctgcatactgtgtgaataaaattggttcatttacatgcgagtgt 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 catgattgtgtaacacctgcatactgtgtgaataaaattggttcatttacatgcgagtgt 387


Query: 388 ctaaatggttatacattatcttcaaatagtaaatcatgtgatgatgtcgatgaacgtact 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctaaatggttatacattatcttcaaatagtaaatcatgtgatgatgtcgatgaacgtact 447


Query: 448 actactccaactatttgtggttctgcaacatgtatgaatacacaaggaggttataaatgt 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 actactccaactatttgtggttctgcaacatgtatgaatacacaaggaggttataaatgt 507


Query: 508 aattgtcaagaaggttatatctatagtccgataacaagtagttgtttagatattgacgaa 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aattgtcaagaaggttatatctatagtccgataacaagtagttgtttagatattgacgaa 567


Query: 568 tgtactaatccat 580
|||||||||||||
Sbjct: 568 tgtactaatccat 580

Score = 34.2 bits (17), Expect(2) = 0.0
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 1 cactgttggcctactgg 17
|||||||||||||||||
Sbjct: 1 cactgttggcctactgg 17

Score = 46.1 bits (23), Expect = 3.7
Identities = 32/35 (91%)
Strand = Plus / Plus


Query: 326 gtcatgattgtgtaacacctgcatactgtgtgaat 360
||||| |||||||| |||| |||||||||||||||
Sbjct: 200 gtcataattgtgtagcaccagcatactgtgtgaat 234

Score = 46.1 bits (23), Expect = 3.7
Identities = 32/35 (91%)
Strand = Plus / Plus


Query: 200 gtcataattgtgtagcaccagcatactgtgtgaat 234
||||| |||||||| |||| |||||||||||||||
Sbjct: 326 gtcatgattgtgtaacacctgcatactgtgtgaat 360

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,813,833,640
Number of extensions: 122355698
Number of successful extensions: 12450165
Number of sequences better than 10.0: 242
Length of query: 1451
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1427
Effective length of database: 97,308,875,965
Effective search space: 138859766002055
Effective search space used: 138859766002055
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 1
Homology vs Protein
Query= Contig-U11914-1 (Contig-U11914-1Q) /CSM_Contig/Contig-U11914-1Q.Seq.d
(1451 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC116982_41(AC116982|pid:none) Dictyostelium discoideum chromoso... 135 5e-30
AF007248_1(AF007248|pid:none) Mus musculus mutant fibrillin-1 (F... 130 9e-29
(Q61554) RecName: Full=Fibrillin-1; Flags: Precursor; &A55624(A... 130 1e-28
AL844547_6(AL844547|pid:none) Mouse DNA sequence from clone RP23... 130 1e-28
(P35555) RecName: Full=Fibrillin-1; Flags: Precursor; &L13923_1... 130 2e-28
X63556_1(X63556|pid:none) H.sapiens mRNA for fibrillin. 130 2e-28
AK304737_1(AK304737|pid:none) Homo sapiens cDNA FLJ61597 partial... 125 3e-27
AF135059_1(AF135059|pid:none) Rattus norvegicus fibrillin-1 mRNA... 122 3e-26
U03272_1(U03272|pid:none) Human fibrillin-2 mRNA, complete cds. 122 4e-26
AB209735_1(AB209735|pid:none) Homo sapiens mRNA for fibrillin 2 ... 122 4e-26
A54105(A54105;S17063;S31101)fibrillin-2 precursor - human 122 4e-26
AK220196_1(AK220196|pid:none) Mus musculus mRNA for mKIAA4226 pr... 121 6e-26
(Q61555) RecName: Full=Fibrillin-2; Flags: Precursor; &A57278(A... 121 6e-26
BC172946_1(BC172946|pid:none) Synthetic construct Mus musculus c... 121 6e-26
AF135060_1(AF135060|pid:none) Rattus norvegicus fibrillin-2 mRNA... 120 9e-26
AC116956_34(AC116956|pid:none) Dictyostelium discoideum chromoso... 119 2e-25
AK131282_1(AK131282|pid:none) Homo sapiens cDNA FLJ16233 fis, cl... 119 3e-25
X62009_1(X62009|pid:none) Homo sapiens partial mRNA for fibrilli... 118 6e-25
AB177798_1(AB177798|pid:none) Homo sapiens FBN3 gene for fibrill... 118 6e-25
AB177799_1(AB177799|pid:none) Homo sapiens FBN3 gene for fibrill... 118 6e-25
AB384635_1(AB384635|pid:none) Synthetic construct DNA, clone: pF... 118 6e-25
(Q75N90) RecName: Full=Fibrillin-3; Flags: Precursor; &AY165863... 118 6e-25
S82451_1(S82451|pid:none) latent transforming growth factor-beta... 117 1e-24
BC078659_1(BC078659|pid:none) Homo sapiens latent transforming g... 117 1e-24
AB209865_1(AB209865|pid:none) Homo sapiens mRNA for latent trans... 117 1e-24
U20217_1(U20217|pid:none) Mus musculus fibrillin-2 mRNA, partial... 116 2e-24
BC166351_1(BC166351|pid:none) Xenopus tropicalis fibrillin 3, mR... 116 2e-24
AK164949_1(AK164949|pid:none) Mus musculus 0 day neonate lung cD... 116 2e-24
(O35806) RecName: Full=Latent-transforming growth factor beta-bi... 114 7e-24
X62008_1(X62008|pid:none) Homo sapiens partial mRNA for fibrilli... 114 9e-24
AC116963_25(AC116963|pid:none) Dictyostelium discoideum chromoso... 114 9e-24
AB177802_1(AB177802|pid:none) Homo sapiens FBN1 gene for fibrill... 114 9e-24
U35363_1(U35363|pid:none) Bos taurus latent TGF-beta binding pro... 114 1e-23
EU854565_1(EU854565|pid:none) Danio rerio fibrillin 4 (fbn4) mRN... 113 2e-23
AF051401_1(AF051401|pid:none) Caenorhabditis elegans fibulin-1 i... 113 2e-23
AF070477_1(AF070477|pid:none) Caenorhabditis elegans fibulin-1D ... 113 2e-23
AC116920_24(AC116920|pid:none) Dictyostelium discoideum chromoso... 112 3e-23
BC119785_1(BC119785|pid:none) Mus musculus latent transforming g... 112 3e-23
DQ310728_1(DQ310728|pid:none) Xenopus laevis fibrillin mRNA, par... 111 6e-23
AC116967_8(AC116967|pid:none) Dictyostelium discoideum chromosom... 111 8e-23
T22793(T22793;T24489)hypothetical protein F56H11.1 - Caenorhabdi... 110 1e-22
AF410799_1(AF410799|pid:none) Mus musculus latent transforming g... 110 1e-22
BC141005_1(BC141005|pid:none) Mus musculus latent transforming g... 110 1e-22
AC116960_61(AC116960|pid:none) Dictyostelium discoideum chromoso... 110 2e-22
AK096539_1(AK096539|pid:none) Homo sapiens cDNA FLJ39220 fis, cl... 110 2e-22
AC116967_7(AC116967|pid:none) Dictyostelium discoideum chromosom... 110 2e-22
AC116920_25(AC116920|pid:none) Dictyostelium discoideum chromoso... 110 2e-22
AK095563_1(AK095563|pid:none) Homo sapiens cDNA FLJ38244 fis, cl... 110 2e-22
BC060355_1(BC060355|pid:none) Xenopus laevis hypothetical protei... 108 4e-22
AC116920_20(AC116920|pid:none) Dictyostelium discoideum chromoso... 108 5e-22
BC086840_1(BC086840|pid:none) Danio rerio EGF-containing fibulin... 108 6e-22
AF288451_1(AF288451|pid:none) Xenopus laevis LTBP-1S protein mRN... 107 8e-22
(O08999) RecName: Full=Latent-transforming growth factor beta-bi... 107 8e-22
AF051345_1(AF051345|pid:none) Homo sapiens latent transforming g... 107 1e-21
(Q8N2S1) RecName: Full=Latent-transforming growth factor beta-bi... 107 1e-21
AF051344_1(AF051344|pid:none) Homo sapiens latent transforming g... 107 1e-21
Y13622_1(Y13622|pid:none) Homo sapiens mRNA for latent transform... 107 1e-21
(P98118) RecName: Full=Vitamin K-dependent protein S; Flags: Pre... 107 1e-21
AK147753_1(AK147753|pid:none) Mus musculus melanocyte cDNA, RIKE... 107 1e-21
S38819(S38819;S37238)plasma protein S - rabbit (fragment) 107 1e-21
BX510920_1(BX510920|pid:none) Zebrafish DNA sequence from clone ... 106 2e-21
AB041857_1(AB041857|pid:none) Ciona intestinalis mRNA for Ci-MET... 106 2e-21
AF489528_1(AF489528|pid:none) Homo sapiens transforming growth f... 106 2e-21
A35626(A35626) transforming growth factor beta-1-binding protein... 106 2e-21
AK298027_1(AK298027|pid:none) Homo sapiens cDNA FLJ51010 complet... 106 2e-21
AB208801_1(AB208801|pid:none) Homo sapiens mRNA for latent trans... 106 2e-21
DQ900937_1(DQ900937|pid:none) Ciona intestinalis gamma-carboxygl... 105 4e-21
AF374376_24(AF374376|pid:none) Oikopleura dioica clone BAC clone... 105 5e-21
(O73775) RecName: Full=Fibulin-1; Short=FIBL-1; Flags: ... 105 5e-21
AF051400_1(AF051400|pid:none) Gallus gallus fibulin-1, isoform C... 105 5e-21
AK298858_1(AK298858|pid:none) Homo sapiens cDNA FLJ55349 complet... 104 7e-21
(Q9NS15) RecName: Full=Latent-transforming growth factor beta-bi... 104 7e-21
AK024477_1(AK024477|pid:none) Homo sapiens mRNA for FLJ00070 pro... 104 7e-21
AK124524_1(AK124524|pid:none) Homo sapiens cDNA FLJ42533 fis, cl... 104 7e-21
BC008761_1(BC008761|pid:none) Homo sapiens latent transforming g... 104 7e-21
AF135960_1(AF135960|pid:none) Homo sapiens latent transforming g... 104 7e-21
AK299351_1(AK299351|pid:none) Homo sapiens cDNA FLJ59398 complet... 104 7e-21
CT033758_4(CT033758|pid:none) Mouse DNA sequence from clone RP23... 104 9e-21
BC094612_1(BC094612|pid:none) Mus musculus latent transforming g... 104 9e-21
(Q8CIR0) RecName: Full=Latent-transforming growth factor beta-bi... 104 9e-21
BT059468_1(BT059468|pid:none) Salmo salar clone ssal-rgf-530-199... 104 9e-21
BT045649_1(BT045649|pid:none) Salmo salar clone ssal-rgf-527-290... 104 9e-21
AY427783_1(AY427783|pid:none) Danio rerio fibulin-4 (fbln4) mRNA... 103 2e-20
(P07224) RecName: Full=Vitamin K-dependent protein S; Flags: Pre... 103 2e-20
EU854566_1(EU854566|pid:none) Danio rerio fibrillin 4 (fbn4) mRN... 103 2e-20
CR555293_3(CR555293|pid:none) Zebrafish DNA sequence from clone ... 103 2e-20
(P07225) RecName: Full=Vitamin K-dependent protein S; Flags: Pre... 103 2e-20
M15036_1(M15036|pid:none) Human vitamin K-dependent plasma prote... 103 2e-20
BX323843_5(BX323843|pid:none) Zebrafish DNA sequence from clone ... 103 2e-20
(Q12805) RecName: Full=EGF-containing fibulin-like extracellular... 102 3e-20
AK312639_1(AK312639|pid:none) Homo sapiens cDNA, FLJ93024, highl... 102 3e-20
AB209212_1(AB209212|pid:none) Homo sapiens mRNA for EGF-containi... 102 3e-20
(Q7YQD7) RecName: Full=EGF-containing fibulin-like extracellular... 102 3e-20
CS161054_1(CS161054|pid:none) Sequence 13 from Patent WO20050831... 102 3e-20
M14338_1(M14338|pid:none) Homo sapiens PROS1 (PROS1) precursor R... 102 3e-20
AK092854_1(AK092854|pid:none) Homo sapiens cDNA FLJ35535 fis, cl... 102 3e-20
I38449(I38449) extracellular protein - human &U03877_1(U03877|p... 102 3e-20
(Q5EA62) RecName: Full=Fibulin-5; Short=FIBL-5; Flags: ... 102 3e-20
(Q5RC26) RecName: Full=Fibulin-5; Short=FIBL-5; Flags: ... 102 3e-20
(Q9UBX5) RecName: Full=Fibulin-5; Short=FIBL-5; AltName... 102 3e-20
AF093118_1(AF093118|pid:none) Homo sapiens UP50 mRNA, complete c... 102 3e-20
BX248290_1(BX248290|pid:none) human full-length cDNA clone CS0DI... 102 3e-20
(Q9WVH8) RecName: Full=Fibulin-5; Short=FIBL-5; AltName... 102 5e-20
(Q9WVH9) RecName: Full=Fibulin-5; Short=FIBL-5; AltName... 102 5e-20
CS161046_1(CS161046|pid:none) Sequence 5 from Patent WO2005083126. 101 6e-20
AK300806_1(AK300806|pid:none) Homo sapiens cDNA FLJ53207 complet... 101 6e-20
AK131126_1(AK131126|pid:none) Mus musculus premature mRNA for mF... 101 6e-20
BC144128_1(BC144128|pid:none) Homo sapiens latent transforming g... 101 6e-20
AF217999_1(AF217999|pid:none) Homo sapiens clone PP213 unknown m... 101 6e-20
AE014296_1363(AE014296|pid:none) Drosophila melanogaster chromos... 101 6e-20
AL021391_7(AL021391|pid:none) Human DNA sequence from clone RP1-... 101 6e-20
AF126110_1(AF126110|pid:none) Homo sapiens fibulin-1 isoform D p... 101 6e-20
CS161044_1(CS161044|pid:none) Sequence 3 from Patent WO200508312... 101 6e-20
BC168401_1(BC168401|pid:none) Synthetic construct Mus musculus c... 101 6e-20
BT032860_1(BT032860|pid:none) Drosophila melanogaster RE24628 fu... 101 6e-20
AK301402_1(AK301402|pid:none) Homo sapiens cDNA FLJ53670 complet... 101 8e-20
DQ227275_1(DQ227275|pid:none) Canis familiaris EMR1 mRNA, comple... 101 8e-20
AK301531_1(AK301531|pid:none) Homo sapiens cDNA FLJ55670 complet... 101 8e-20
U66889_1(U66889|pid:none) Mus musculus Emr1 mRNA, alternatively ... 101 8e-20
AY173044_1(AY173044|pid:none) Oncorhynchus mykiss latent transfo... 101 8e-20
(Q61549) RecName: Full=EGF-like module-containing mucin-like hor... 101 8e-20
FN357618_12(FN357618|pid:none) Schistosoma mansoni genome sequen... 101 8e-20
BC031184_1(BC031184|pid:none) Mus musculus epidermal growth fact... 100 1e-19
AY185605_1(AY185605|pid:none) Mus musculus EGF containing fibuli... 100 1e-19
AX647129_1(AX647129|pid:none) Sequence 1321 from Patent EP1270724. 100 1e-19
(Q8BPB5) RecName: Full=EGF-containing fibulin-like extracellular... 100 1e-19
DQ324381_1(DQ324381|pid:none) Notophthalmus viridescens growth a... 100 2e-19
AY358898_1(AY358898|pid:none) Homo sapiens clone DNA32279 FBLN5 ... 100 2e-19
AK080869_1(AK080869|pid:none) Mus musculus 4 days neonate male a... 100 2e-19
Z37983_6(Z37983|pid:none) Caenorhabditis elegans Cosmid B0393, c... 100 2e-19
CR555293_1(CR555293|pid:none) Zebrafish DNA sequence from clone ... 100 2e-19
AF137350_1(AF137350|pid:none) Rattus norvegicus embryonic vascul... 99 3e-19
BC151354_1(BC151354|pid:none) Bos taurus latent transforming gro... 99 3e-19
(O42182) RecName: Full=Fibulin-1; Short=FIBL-1; Flags: ... 99 3e-19
BC161973_1(BC161973|pid:none) Rattus norvegicus fibulin 1, mRNA ... 99 3e-19
L31380_1(L31380|pid:none) Macaca mulatta vitamin K dependent pro... 99 3e-19
(Q28520) RecName: Full=Vitamin K-dependent protein S; Flags: Pre... 99 3e-19
AK050380_1(AK050380|pid:none) Mus musculus adult male liver tumo... 99 4e-19
AK155862_1(AK155862|pid:none) Mus musculus B6-derived CD11 +ve d... 99 5e-19
(O35568) RecName: Full=EGF-containing fibulin-like extracellular... 98 9e-19
AK304777_1(AK304777|pid:none) Homo sapiens cDNA FLJ56912 complet... 98 9e-19
AL050095_1(AL050095|pid:none) Homo sapiens mRNA; cDNA DKFZp586A1... 98 9e-19
(Q63772) RecName: Full=Growth arrest-specific protein 6; ... 97 1e-18
BC053117_1(BC053117|pid:none) Danio rerio growth arrest-specific... 97 1e-18
(Q08761) RecName: Full=Vitamin K-dependent protein S; Flags: Pre... 97 2e-18
L40459_1(L40459|pid:none) Mus musculus latent transforming growt... 97 2e-18
BC166387_1(BC166387|pid:none) Xenopus tropicalis protein S (alph... 96 2e-18
AK035388_1(AK035388|pid:none) Mus musculus adult male urinary bl... 96 2e-18
AK159646_1(AK159646|pid:none) Mus musculus osteoclast-like cell ... 96 2e-18
AF135253_1(AF135253|pid:none) Mus musculus fibulin-2 (Fbln2) gen... 96 2e-18
AK168688_1(AK168688|pid:none) Mus musculus 17 days embryo stomac... 96 2e-18
(P37889) RecName: Full=Fibulin-2; Short=FIBL-2; Flags: ... 96 2e-18
AK159361_1(AK159361|pid:none) Mus musculus osteoclast-like cell ... 96 2e-18
BC051690_1(BC051690|pid:none) Homo sapiens fibulin 2, mRNA (cDNA... 96 3e-18
AB174392_1(AB174392|pid:none) Macaca fascicularis brain cDNA clo... 96 3e-18
AY130459_1(AY130459|pid:none) Homo sapiens fibulin 2 (FBLN2) mRN... 96 3e-18
A55184(A55184;T08744) fibulin-2 precursor - human &CS161050_1(C... 96 3e-18
AX400066_1(AX400066|pid:none) Sequence 237 from Patent WO0218424. 96 3e-18
AC116963_42(AC116963|pid:none) Dictyostelium discoideum chromoso... 96 4e-18
(P53813) RecName: Full=Vitamin K-dependent protein S; Flags: Pre... 96 4e-18
AY130458_1(AY130458|pid:none) Homo sapiens fibulin 2 (FBLN2) gen... 96 4e-18
AK299277_1(AK299277|pid:none) Homo sapiens cDNA FLJ53170 complet... 96 4e-18
(Q5R3Z7) RecName: Full=Protein kinase C-binding protein NELL2; A... 95 6e-18
A57172(A57172) probable hormone receptor EMR1 precursor - human ... 95 6e-18
AK295125_1(AK295125|pid:none) Homo sapiens cDNA FLJ56077 complet... 95 6e-18
AE014135_44(AE014135|pid:none) Drosophila melanogaster chromosom... 95 6e-18
CS208045_1(CS208045|pid:none) Sequence 54 from Patent WO20050798... 95 6e-18
AK316058_1(AK316058|pid:none) Homo sapiens cDNA, FLJ78957 comple... 95 6e-18
S78040(S78040;S78560;S36440)fibulin, splice form C precursor - m... 95 6e-18
(A2VCU8) RecName: Full=Protein kinase C-binding protein NELL2; A... 95 6e-18
AK297521_1(AK297521|pid:none) Homo sapiens cDNA FLJ60303 complet... 95 6e-18
AK315960_1(AK315960|pid:none) Homo sapiens cDNA, FLJ78859 comple... 95 7e-18
EF110908_1(EF110908|pid:none) Rattus norvegicus nel-like 2 splic... 95 7e-18
BX276181_1(BX276181|pid:none) Zebrafish DNA sequence from clone ... 95 7e-18
AY089719_1(AY089719|pid:none) Rattus norvegicus neuron-specific ... 95 7e-18
U19972_1(U19972|pid:none) Mus musculus fibrillin-1 mRNA, partial... 94 1e-17
AB121210_1(AB121210|pid:none) Marsupenaeus japonicus mjTSPb mRNA... 94 1e-17
AF194818_1(AF194818|pid:none) Gallus gallus fibrillin-2 mRNA, pa... 94 1e-17
A48089(A48089;S37437) growth arrest-specific protein gas6 - mous... 94 2e-17
U94333_1(U94333|pid:none) Human Clq/MBL/SPA receptor C1qR(p) mRN... 94 2e-17
AB209895_1(AB209895|pid:none) Homo sapiens mRNA for complement c... 94 2e-17
AF085200_1(AF085200|pid:none) Hydra vulgaris receptor tyrosine k... 94 2e-17
(Q9NPY3) RecName: Full=Complement component C1q receptor; AltNam... 94 2e-17
AK083701_1(AK083701|pid:none) Mus musculus 9 days embryo whole b... 93 2e-17
(Q61810) RecName: Full=Latent-transforming growth factor beta-bi... 93 2e-17
DQ314743_1(DQ314743|pid:none) Oncorhynchus mykiss fibrillin 1 (F... 93 2e-17
AL732564_1(AL732564|pid:none) Mouse DNA sequence from clone RP23... 93 2e-17
A57293(A57293;A60487)latent transforming growth factor beta-bind... 93 2e-17
AK095637_1(AK095637|pid:none) Homo sapiens cDNA FLJ38318 fis, cl... 93 2e-17
CR861463_1(CR861463|pid:none) Pongo abelii mRNA; cDNA DKFZp459E2... 93 2e-17
CS173019_1(CS173019|pid:none) Sequence 8 from Patent WO200508585... 93 3e-17
AB065918_1(AB065918|pid:none) Homo sapiens gene for seven transm... 93 3e-17
AK035019_1(AK035019|pid:none) Mus musculus 12 days embryo embryo... 93 3e-17
AK290401_1(AK290401|pid:none) Homo sapiens cDNA FLJ75356 complet... 93 3e-17
AK039790_1(AK039790|pid:none) Mus musculus adult male spinal cor... 93 3e-17
BC034076_1(BC034076|pid:none) Mus musculus hemicentin 2, mRNA (c... 93 3e-17
BC051968_1(BC051968|pid:none) Mus musculus NEL-like 2 (chicken),... 93 3e-17
BC059395_1(BC059395|pid:none) Homo sapiens egf-like module conta... 93 3e-17
(Q14246) RecName: Full=EGF-like module-containing mucin-like hor... 93 3e-17
(A6QR11) RecName: Full=Protein kinase C-binding protein NELL2; A... 92 4e-17
(Q9UHX3) RecName: Full=EGF-like module-containing mucin-like hor... 92 4e-17
U13646_1(U13646|pid:none) Caenorhabditis elegans cosmid ZK783, c... 92 4e-17
AK222891_1(AK222891|pid:none) Homo sapiens mRNA for egf-like mod... 92 4e-17
AK298700_1(AK298700|pid:none) Homo sapiens cDNA FLJ56997 complet... 92 4e-17
T34513(T34513)hypothetical protein ZK783.1 - Caenorhabditis eleg... 92 4e-17
CR541934_1(CR541934|pid:none) Homo sapiens full open reading fra... 92 5e-17
AK075453_1(AK075453|pid:none) Homo sapiens cDNA PSEC0145 fis, cl... 92 5e-17
AF109121_1(AF109121|pid:none) Homo sapiens EGF-containing fibuli... 92 5e-17
AK292079_1(AK292079|pid:none) Homo sapiens cDNA FLJ78052 complet... 92 5e-17
BC083804_1(BC083804|pid:none) Rattus norvegicus EGF-containing f... 92 5e-17
AF124486_1(AF124486|pid:none) Homo sapiens fibulin-like extracel... 92 5e-17
(O95967) RecName: Full=EGF-containing fibulin-like extracellular... 92 5e-17
AX023976_1(AX023976|pid:none) Sequence 30 from Patent WO0022120. 92 5e-17
AF093119_1(AF093119|pid:none) Homo sapiens UPH1 (UPH1) mRNA, com... 92 5e-17
AK290803_1(AK290803|pid:none) Homo sapiens cDNA FLJ76785 complet... 92 6e-17
AK126533_1(AK126533|pid:none) Homo sapiens cDNA FLJ44569 fis, cl... 92 6e-17
(Q7ZXL5) RecName: Full=Protein kinase C-binding protein NELL2; A... 92 6e-17
(Q90827) RecName: Full=Protein NEL; AltName: Full=93 kDa protein... 92 6e-17
BC111511_1(BC111511|pid:none) Xenopus laevis hypothetical LOC495... 92 6e-17
DQ227276_1(DQ227276|pid:none) Canis familiaris EMR2 large isofor... 92 6e-17
AJ627191_1(AJ627191|pid:none) Bos taurus mRNA for CD97 antigen t... 92 6e-17
(Q2Q421) RecName: Full=EGF-like module-containing mucin-like hor... 92 6e-17
BC127004_1(BC127004|pid:none) Homo sapiens egf-like module conta... 91 8e-17
BC160988_1(BC160988|pid:none) Xenopus tropicalis hypothetical pr... 91 8e-17
BC121936_1(BC121936|pid:none) Xenopus tropicalis CEGP1 protein, ... 91 8e-17
U76764_1(U76764|pid:none) Human CD97 mRNA, complete cds. 91 1e-16
AC117075_64(AC117075|pid:none) Dictyostelium discoideum chromoso... 91 1e-16
BT072617_1(BT072617|pid:none) Salmo salar clone ssal-rgf-532-233... 91 1e-16
AL133553_4(AL133553|pid:none) Human DNA sequence from clone GS1-... 91 1e-16
AK303145_1(AK303145|pid:none) Homo sapiens cDNA FLJ57022 complet... 91 1e-16
AL833232_1(AL833232|pid:none) Homo sapiens mRNA; cDNA DKFZp762L1... 91 1e-16
BC052263_1(BC052263|pid:none) Homo sapiens signal peptide, CUB d... 91 1e-16
AY299330_1(AY299330|pid:none) Herdmania curvata ci-meta1-like pr... 91 1e-16
(O55058) RecName: Full=EGF-containing fibulin-like extracellular... 90 2e-16
(P48960) RecName: Full=CD97 antigen; AltName: Full=Leukocyte ant... 90 2e-16
DQ227273_1(DQ227273|pid:none) Pan troglodytes EMR2 mRNA, partial... 90 2e-16
(Q8IX30) RecName: Full=Signal peptide, CUB and EGF-like domain-c... 90 2e-16
AL583887_2(AL583887|pid:none) Mouse DNA sequence from clone RP23... 90 2e-16
BX248238_4(BX248238|pid:none) Zebrafish DNA sequence from clone ... 89 3e-16
AJ306906_1(AJ306906|pid:none) Homo sapiens partial mRNA for fibu... 89 4e-16
AK131552_1(AK131552|pid:none) Homo sapiens cDNA FLJ16792 fis, cl... 89 4e-16
(Q96RW7) RecName: Full=Hemicentin-1; AltName: Full=Fibulin-6; ... 89 4e-16
AF156100_1(AF156100|pid:none) Homo sapiens hemicentin mRNA, comp... 89 4e-16
FN400891_1(FN400891|pid:none) Oncorhynchus mykiss mRNA for nel-l... 89 4e-16
AK123039_1(AK123039|pid:none) Homo sapiens cDNA FLJ41044 fis, cl... 89 4e-16
BC172190_1(BC172190|pid:none) Synthetic construct Homo sapiens c... 89 4e-16
BC111690_1(BC111690|pid:none) Homo sapiens signal peptide, CUB d... 89 4e-16
(Q9NQ36) RecName: Full=Signal peptide, CUB and EGF-like domain-c... 89 4e-16
(Q66PY1) RecName: Full=Signal peptide, CUB and EGF-like domain-c... 89 5e-16
BC157687_1(BC157687|pid:none) Xenopus tropicalis hypothetical pr... 88 7e-16
BT045323_1(BT045323|pid:none) Salmo salar clone ssal-rgf-518-160... 88 7e-16
DQ227274_1(DQ227274|pid:none) Canis familiaris CD97 large isofor... 88 7e-16
AC013451_1(AC013451|pid:none) Homo sapiens chromosome 14 clone C... 88 9e-16
AF160978_1(AF160978|pid:none) Rattus norvegicus C1qRp (C1qRp) mR... 88 9e-16
BC063920_1(BC063920|pid:none) Xenopus tropicalis matrilin 2, mRN... 88 9e-16
AC005327_1(AC005327|pid:none) Homo sapiens chromosome 19, cosmid... 87 2e-15
AF525689_1(AF525689|pid:none) Homo sapiens signal peptide-CUB-EG... 87 2e-15
(Q8IWY4) RecName: Full=Signal peptide, CUB and EGF-like domain-c... 87 2e-15
S69358_1(S69358|pid:none) Mus sp. fibrillin-1 (Fbn-1) mRNA, part... 86 3e-15
AM114769_1(AM114769|pid:none) Platynereis dumerilii partial mRNA... 86 3e-15
CR786571_11(CR786571|pid:none) Zebrafish DNA sequence from clone... 86 3e-15
AK301458_1(AK301458|pid:none) Homo sapiens cDNA FLJ60183 complet... 86 3e-15
Z82214_8(Z82214|pid:none) Human DNA sequence from clone RP3-526I... 86 4e-15
AC117075_65(AC117075|pid:none) Dictyostelium discoideum chromoso... 86 4e-15
BC066066_1(BC066066|pid:none) Mus musculus signal peptide, CUB d... 85 6e-15
(Q8IUX8) RecName: Full=EGF-like domain-containing protein 6; Alt... 85 6e-15
(Q6NZL8) RecName: Full=Signal peptide, CUB and EGF-like domain-c... 85 6e-15
AK303613_1(AK303613|pid:none) Homo sapiens cDNA FLJ58718 complet... 85 6e-15
AX417526_1(AX417526|pid:none) Sequence 27 from Patent WO0230977. 85 6e-15
AK075214_1(AK075214|pid:none) Homo sapiens cDNA FLJ90733 fis, cl... 85 6e-15
AX417504_1(AX417504|pid:none) Sequence 5 from Patent WO0230977. 85 6e-15
AX417528_1(AX417528|pid:none) Sequence 29 from Patent WO0230977. 85 6e-15
AF186084_1(AF186084|pid:none) Homo sapiens epidermal growth fact... 85 6e-15
AK300137_1(AK300137|pid:none) Homo sapiens cDNA FLJ51300 complet... 85 6e-15
BC034949_1(BC034949|pid:none) Homo sapiens egf-like module conta... 84 1e-14
CT025750_1(CT025750|pid:none) Zebrafish DNA sequence from clone ... 84 1e-14
AC117081_39(AC117081|pid:none) Dictyostelium discoideum chromoso... 84 1e-14
AB193554_1(AB193554|pid:none) Danio rerio scube2 mRNA for Scube2... 84 1e-14
(Q9JJS0) RecName: Full=Signal peptide, CUB and EGF-like domain-c... 84 1e-14
BC079849_1(BC079849|pid:none) Mus musculus signal peptide, CUB d... 84 2e-14
CR859355_1(CR859355|pid:none) Pongo abelii mRNA; cDNA DKFZp469F2... 84 2e-14
AK300462_1(AK300462|pid:none) Homo sapiens cDNA FLJ55456 complet... 84 2e-14
AL035436_2(AL035436|pid:none) Drosophila melanogaster cosmid clo... 84 2e-14
M16152_1(M16152|pid:none) Drosophila melanogaster Notch growth f... 84 2e-14
BC075241_1(BC075241|pid:none) Xenopus laevis hypothetical protei... 83 2e-14
U66892_1(U66892|pid:none) Mus musculus Emr1 mRNA, alternatively ... 83 2e-14
BC141789_1(BC141789|pid:none) Danio rerio zgc:162651, mRNA (cDNA... 83 2e-14
AY570730_1(AY570730|pid:none) Danio rerio matrilin-4-like protei... 83 2e-14
AJ698733_1(AJ698733|pid:none) Danio rerio partial mRNA for matri... 83 2e-14
AJ698732_1(AJ698732|pid:none) Danio rerio partial mRNA for matri... 83 2e-14
AJ698735_1(AJ698735|pid:none) Danio rerio partial mRNA for matri... 83 2e-14
BC010444_1(BC010444|pid:none) Homo sapiens matrilin 2, mRNA (cDN... 83 3e-14
AX399977_1(AX399977|pid:none) Sequence 148 from Patent WO0218424. 83 3e-14
T46488(T46488)hypothetical protein DKFZp434J065.1 - human (fragm... 83 3e-14
AX399978_1(AX399978|pid:none) Sequence 149 from Patent WO0218424. 83 3e-14
(O00339) RecName: Full=Matrilin-2; Flags: Precursor; 83 3e-14
AF300614_1(AF300614|pid:none) Gallus gallus fibrillin-2 (fbn2) m... 83 3e-14
AF300615_1(AF300615|pid:none) Gallus gallus fibrillin-2B (fbn2) ... 83 3e-14
AB074423_1(AB074423|pid:none) Rattus norvegicus fib-2 mRNA for f... 83 3e-14
(P46530) RecName: Full=Neurogenic locus notch homolog protein 1;... 82 5e-14
AF308602_1(AF308602|pid:none) Homo sapiens NOTCH 1 (N1) mRNA, co... 82 5e-14
AL110498_8(AL110498|pid:none) Caenorhabditis elegans YAC Y64G10A... 82 5e-14
BC124790_1(BC124790|pid:none) Danio rerio zgc:154001, mRNA (cDNA... 82 5e-14
T27283(T27283)hypothetical protein Y64G10A.f - Caenorhabditis el... 82 5e-14
BC043473_1(BC043473|pid:none) Mus musculus von Willebrand factor... 82 6e-14
AB100603_1(AB100603|pid:none) Mus musculus Notch1 gene for trans... 82 6e-14
AF054501_1(AF054501|pid:none) Homo sapiens latent transforming g... 82 6e-14
(Q3U515) RecName: Full=von Willebrand factor C and EGF domain-co... 82 6e-14
(P46531) RecName: Full=Neurogenic locus notch homolog protein 1;... 82 6e-14
AB100603_2(AB100603|pid:none) Mus musculus Notch1 gene for trans... 82 6e-14
AF508809_1(AF508809|pid:none) Mus musculus notch 1 protein mRNA,... 82 6e-14
AC117081_43(AC117081|pid:none) Dictyostelium discoideum chromoso... 82 6e-14
AL627123_1(AL627123|pid:none) Mouse DNA sequence from clone RP23... 81 8e-14
(Q80V70) RecName: Full=Multiple epidermal growth factor-like dom... 81 8e-14
AY074820_1(AY074820|pid:none) Mus musculus nidogen 2 protein (Ni... 81 8e-14
AK092062_1(AK092062|pid:none) Homo sapiens cDNA FLJ34743 fis, cl... 81 8e-14
AL117610_1(AL117610|pid:none) Homo sapiens mRNA; cDNA DKFZp564P2... 81 1e-13
AF300613_1(AF300613|pid:none) Gallus gallus fibrillin-1 (fbn1) m... 81 1e-13
BC146386_1(BC146386|pid:none) Synthetic construct Homo sapiens c... 81 1e-13
BC069674_1(BC069674|pid:none) Homo sapiens NEL-like 1 (chicken),... 81 1e-13
(O75095) RecName: Full=Multiple epidermal growth factor-like dom... 81 1e-13
(A2ARV4) RecName: Full=Low-density lipoprotein receptor-related ... 81 1e-13
DQ438942_1(DQ438942|pid:none) Danio rerio Scube2 mRNA, complete ... 81 1e-13
(Q2VWQ2) RecName: Full=Protein kinase C-binding protein NELL1; A... 81 1e-13
AF194817_1(AF194817|pid:none) Gallus gallus fibrillin-1 mRNA, pa... 81 1e-13
BC152490_1(BC152490|pid:none) Danio rerio similar to signal pept... 81 1e-13
BC121467_1(BC121467|pid:none) Xenopus tropicalis NEL-like 1, mRN... 81 1e-13
AB074424_1(AB074424|pid:none) Rattus norvegicus fib-2 mRNA for f... 81 1e-13
AB011539_1(AB011539|pid:none) Homo sapiens mRNA for MEGF6 protei... 81 1e-13
T17324(T17324)hypothetical protein DKFZp564P2063.1 - human (frag... 81 1e-13
(Q92832) RecName: Full=Protein kinase C-binding protein NELL1; A... 81 1e-13
BC151647_1(BC151647|pid:none) Bos taurus nidogen 2 (osteonidogen... 80 1e-13
BX537118_2(BX537118|pid:none) Zebrafish DNA sequence from clone ... 80 1e-13
BC035975_1(BC035975|pid:none) Homo sapiens uromodulin, mRNA (cDN... 80 1e-13
M17778_1(M17778|pid:none) Human uromodulin (Tamm-Horsfall glycop... 80 1e-13
AX775807_1(AX775807|pid:none) Sequence 77 from Patent WO03048202. 80 1e-13
AK302477_1(AK302477|pid:none) Homo sapiens cDNA FLJ58816 complet... 80 2e-13
CQ848396_1(CQ848396|pid:none) Sequence 1 from Patent WO2004063226. 80 2e-13
BC142624_1(BC142624|pid:none) Homo sapiens von Willebrand factor... 80 2e-13
AY358336_1(AY358336|pid:none) Homo sapiens clone DNA41379 DFLL29... 80 2e-13
S18188(S18188)notch protein homolog - rat 80 2e-13
AY805407_1(AY805407|pid:none) Danio rerio notch1b mRNA, complete... 80 2e-13
CQ848407_1(CQ848407|pid:none) Sequence 12 from Patent WO20040632... 80 2e-13
AK295772_1(AK295772|pid:none) Homo sapiens cDNA FLJ60269 complet... 80 2e-13
AK304721_1(AK304721|pid:none) Homo sapiens cDNA FLJ61085 complet... 80 2e-13
AX084239_1(AX084239|pid:none) Sequence 33 from Patent WO0110902. 80 2e-13
X82245_1(X82245|pid:none) H.sapiens nidogen gene (exon 1). 80 2e-13
AY332224_1(AY332224|pid:none) Danio rerio epidermal growth facto... 80 2e-13
AL122018_1(AL122018|pid:none) Human DNA sequence from clone RP4-... 80 2e-13
(Q9TU53) RecName: Full=Cubilin; Flags: Precursor; &AF137068_1(A... 80 2e-13
(P14543) RecName: Full=Nidogen-1; Short=NID-1; AltName:... 80 2e-13
(Q5RBP1) RecName: Full=Nephronectin; Flags: Precursor; &CR85859... 80 2e-13
BC166654_1(BC166654|pid:none) Synthetic construct Homo sapiens c... 80 2e-13
AK140832_1(AK140832|pid:none) Mus musculus 16 days embryo head c... 80 2e-13
AK052839_1(AK052839|pid:none) Mus musculus 10 days lactation, ad... 80 2e-13
BC054746_1(BC054746|pid:none) Mus musculus nidogen 2, mRNA (cDNA... 80 2e-13
AB209448_1(AB209448|pid:none) Homo sapiens mRNA for nidogen (ena... 79 3e-13
BC129003_1(BC129003|pid:none) Xenopus tropicalis hypothetical pr... 79 3e-13
BC169012_1(BC169012|pid:none) Rattus norvegicus nidogen 2, mRNA ... 79 3e-13
AK091961_1(AK091961|pid:none) Homo sapiens cDNA FLJ34642 fis, cl... 79 3e-13
AJ507288_1(AJ507288|pid:none) Cupiennius salei partial mRNA for ... 79 3e-13
(Q5R5C1) RecName: Full=Uromodulin; Flags: Precursor; &CR860941_... 79 3e-13
(Q96DN2) RecName: Full=von Willebrand factor C and EGF domain-co... 79 3e-13
AL021578_1(AL021578|pid:none) Human DNA sequence from clone RP3-... 79 3e-13
(O88322) RecName: Full=Nidogen-2; Short=NID-2; AltName:... 79 3e-13
(Q01705) RecName: Full=Neurogenic locus notch homolog protein 1;... 79 4e-13
AK083151_1(AK083151|pid:none) Mus musculus adult male hippocampu... 79 5e-13
(Q8AVH7) RecName: Full=EGF-like domain-containing protein 6; Alt... 79 5e-13
BC005429_1(BC005429|pid:none) Mus musculus matrilin 2, mRNA (cDN... 79 5e-13
AK163818_1(AK163818|pid:none) Mus musculus 16 days embryo head c... 79 5e-13
(P21783) RecName: Full=Neurogenic locus notch protein homolog; ... 79 5e-13
BX648241_1(BX648241|pid:none) Homo sapiens mRNA; cDNA DKFZp686D1... 79 5e-13
(Q14112) RecName: Full=Nidogen-2; Short=NID-2; AltName:... 79 5e-13
AK291652_1(AK291652|pid:none) Homo sapiens cDNA FLJ76878 complet... 79 5e-13
AX647133_1(AX647133|pid:none) Sequence 1325 from Patent EP1270724. 79 5e-13
AB009799_1(AB009799|pid:none) Homo sapiens gene for osteonidogen... 79 5e-13
BC076013_1(BC076013|pid:none) Danio rerio EGF-like-domain, multi... 78 7e-13
AJ536342_1(AJ536342|pid:none) Glomeris marginata partial mRNA fo... 78 7e-13
A35844(A35844)Xotch protein - African clawed frog 78 7e-13
EF634346_1(EF634346|pid:none) Lehmannia valentiana matrilin-like... 78 7e-13
AJ291489_1(AJ291489|pid:none) Paracentrotus lividus mRNA for fib... 78 9e-13
(O08746) RecName: Full=Matrilin-2; Flags: Precursor; &U69262_1(... 77 1e-12
AJ698736_1(AJ698736|pid:none) Danio rerio partial mRNA for matri... 77 1e-12
AY035899_1(AY035899|pid:none) Mus musculus nephronectin long iso... 77 1e-12
AK027775_1(AK027775|pid:none) Homo sapiens cDNA FLJ14869 fis, cl... 77 1e-12
BC096103_1(BC096103|pid:none) Homo sapiens NEL-like 1 (chicken),... 77 1e-12
AK158764_1(AK158764|pid:none) Mus musculus visual cortex cDNA, R... 77 1e-12
BC068308_1(BC068308|pid:none) Mus musculus nephronectin, mRNA (c... 77 1e-12
AF397008_1(AF397008|pid:none) Mus musculus nephronectin (Neph1) ... 77 1e-12
AC004663_1(AC004663|pid:none) Homo sapiens chromosome 19, cosmid... 77 1e-12
(P98158) RecName: Full=Low-density lipoprotein receptor-related ... 77 1e-12
BC096100_1(BC096100|pid:none) Homo sapiens NEL-like 1 (chicken),... 77 1e-12
AK299558_1(AK299558|pid:none) Homo sapiens cDNA FLJ55362 complet... 77 1e-12
AF397007_1(AF397007|pid:none) Mus musculus nephronectin (Neph1) ... 77 1e-12
M33753_1(M33753|pid:none) D.melanogaster crumbs protein mRNA, co... 77 2e-12
AF053364_1(AF053364|pid:none) Sus scrofa epidermal growth factor... 77 2e-12
(P10040) RecName: Full=Protein crumbs; AltName: Full=95F; Flags:... 77 2e-12
DQ900934_1(DQ900934|pid:none) Ciona intestinalis gamma-carboxygl... 77 2e-12
AK302826_1(AK302826|pid:none) Homo sapiens cDNA FLJ54394 complet... 77 2e-12
(P82279) RecName: Full=Crumbs homolog 1; Flags: Precursor; &AL1... 77 2e-12
(Q8C088) RecName: Full=EGF-like domain-containing protein C3orf5... 77 2e-12
BC035608_1(BC035608|pid:none) Homo sapiens nidogen 2 (osteonidog... 77 2e-12
AF154671_1(AF154671|pid:none) Homo sapiens CRB1 mRNA, complete c... 77 2e-12
AK299368_1(AK299368|pid:none) Homo sapiens cDNA FLJ61360 complet... 77 2e-12
EF566886_2(EF566886|pid:none) Hydractinia symbiolongicarpus CnPo... 77 2e-12
BC162671_1(BC162671|pid:none) Danio rerio epidermal growth facto... 76 3e-12
AB209447_1(AB209447|pid:none) Homo sapiens mRNA for Notch homolo... 76 3e-12
AK018073_1(AK018073|pid:none) Mus musculus 14 days embryo thymus... 76 3e-12
AB072758_1(AB072758|pid:none) Macaca fascicularis testis cDNA cl... 76 3e-12
AY165867_1(AY165867|pid:none) Gallus gallus fibrillin-3 precurso... 76 3e-12
BC081814_1(BC081814|pid:none) Rattus norvegicus uromodulin, mRNA... 76 3e-12
AK084876_1(AK084876|pid:none) Mus musculus 13 days embryo lung c... 75 5e-12
(Q9JJZ5) RecName: Full=EGF-like domain-containing protein 6; Alt... 75 5e-12
AK041633_1(AK041633|pid:none) Mus musculus 3 days neonate thymus... 75 5e-12
AK053738_1(AK053738|pid:none) Mus musculus 0 day neonate eyeball... 75 5e-12
(P10493) RecName: Full=Nidogen-1; Short=NID-1; AltName:... 75 5e-12
X14480_1(X14480|pid:none) Mouse mRNA for nidogen. 75 5e-12
BC063189_1(BC063189|pid:none) Xenopus tropicalis hypothetical pr... 75 6e-12
AL691427_2(AL691427|pid:none) Mouse DNA sequence from clone RP23... 75 6e-12
BC117810_1(BC117810|pid:none) Mus musculus RIKEN cDNA 6130401L20... 75 6e-12
AY995116_1(AY995116|pid:none) Strigamia maritima notch mRNA, par... 75 8e-12
AE014297_4001(AE014297|pid:none) Drosophila melanogaster chromos... 74 1e-11
BC172642_1(BC172642|pid:none) Synthetic construct Mus musculus c... 74 1e-11
AE014297_3999(AE014297|pid:none) Drosophila melanogaster chromos... 74 1e-11
(Q04721) RecName: Full=Neurogenic locus notch homolog protein 2;... 74 1e-11
AF308601_1(AF308601|pid:none) Homo sapiens NOTCH 2 (N2) mRNA, co... 74 1e-11
AX357059_1(AX357059|pid:none) Sequence 21 from Patent EP1175909.... 74 1e-11
AE014297_4000(AE014297|pid:none) Drosophila melanogaster chromos... 74 1e-11
AF420599_1(AF420599|pid:none) Mus musculus Tamm-Horsfall protein... 74 1e-11
AF146344_1(AF146344|pid:none) Mus musculus CD97 antigen (Cd97) m... 74 2e-11
BC071224_1(BC071224|pid:none) Mus musculus matrilin 3, mRNA (cDN... 74 2e-11
AJ242929_1(AJ242929|pid:none) Mus musculus matn3 gene for matril... 74 2e-11
AB095016_1(AB095016|pid:none) Cynops pyrrhogaster Notch-1 mRNA f... 74 2e-11
AB121211_1(AB121211|pid:none) Marsupenaeus japonicus mjTSPc mRNA... 74 2e-11
AK290856_1(AK290856|pid:none) Homo sapiens cDNA FLJ76037 complet... 73 2e-11
Y13341_1(Y13341|pid:none) Homo sapiens mRNA for matrilin-3, part... 73 2e-11
DQ976710_2(DQ976710|pid:none) Hylobates klossii NOTCH2 (NOTCH2) ... 73 2e-11
(O15232) RecName: Full=Matrilin-3; Flags: Precursor; &AC079145_... 73 2e-11
AJ001047_1(AJ001047|pid:none) Homo sapiens mRNA for matrilin-3. 73 2e-11
AY265358_1(AY265358|pid:none) Homo sapiens glycoprotein receptor... 72 4e-11
AX817295_1(AX817295|pid:none) Sequence 43 from Patent WO02081517. 72 4e-11
(Q9Z0M6) RecName: Full=CD97 antigen; AltName: CD_antigen=CD97; F... 72 4e-11
(P10079) RecName: Full=Fibropellin-1; AltName: Full=Fibropellin-... 72 4e-11
Y18365_1(Y18365|pid:none) Mus musculus mRNA for CD97 antigen. 72 4e-11
AC007556_2(AC007556|pid:none) Homo sapiens BAC clone RP11-18C9 f... 72 4e-11
(P98164) RecName: Full=Low-density lipoprotein receptor-related ... 72 4e-11
AY265357_1(AY265357|pid:none) Homo sapiens glycoprotein receptor... 72 4e-11
FJ222591_1(FJ222591|pid:none) Periplaneta americana Notch protei... 72 4e-11
BC126986_1(BC126986|pid:none) Homo sapiens fibulin 7, mRNA (cDNA... 72 4e-11
AF462310_1(AF462310|pid:none) Danio rerio thrombospondin 3 mRNA,... 72 4e-11
AK313587_1(AK313587|pid:none) Homo sapiens cDNA, FLJ94152, highl... 72 5e-11
BX005301_9(BX005301|pid:none) Zebrafish DNA sequence from clone ... 72 5e-11
AB209873_1(AB209873|pid:none) Homo sapiens mRNA for notch1 prepr... 72 5e-11
(A2AVA0) RecName: Full=Sushi, von Willebrand factor type A, EGF ... 72 5e-11
(Q8JHW2) RecName: Full=Thrombospondin-3a; Short=Thbs3a;... 72 5e-11
CR925810_1(CR925810|pid:none) Zebrafish DNA sequence from clone ... 72 7e-11
AB098194_1(AB098194|pid:none) Codonosiga gracilis CgPTK-f mRNA f... 72 7e-11
AK297814_1(AK297814|pid:none) Homo sapiens cDNA FLJ53494 complet... 71 9e-11
(O70244) RecName: Full=Cubilin; AltName: Full=Intrinsic factor-c... 71 9e-11
AF406641_1(AF406641|pid:none) Mus musculus crumbs-like protein 1... 71 9e-11
A49175(A49175;PH1570;S32113) Motch B protein - mouse (fragment) ... 71 1e-10
AX817297_1(AX817297|pid:none) Sequence 45 from Patent WO02081517. 71 1e-10
(Q9JLB4) RecName: Full=Cubilin; AltName: Full=Intrinsic factor-c... 71 1e-10
EU685294_1(EU685294|pid:none) Branchiostoma lanceolatum notch re... 71 1e-10
BC061675_1(BC061675|pid:none) Xenopus laevis ETL protein, mRNA (... 71 1e-10
L33406_1(L33406|pid:none) Mus musculus uromodulin mRNA, complete... 71 1e-10
Y12539_1(Y12539|pid:none) Branchiostoma floridae mRNA for putati... 70 1e-10
DQ917572_1(DQ917572|pid:none) Parhyale hawaiensis notch protein ... 70 1e-10
AB218869_1(AB218869|pid:none) Rhyparobia maderae LpR mRNA for Li... 70 1e-10
BC017134_1(BC017134|pid:none) Mus musculus EGF, latrophilin seve... 70 1e-10
AY506357_1(AY506357|pid:none) Homo sapiens truncated epidermal g... 70 1e-10
BC060741_1(BC060741|pid:none) Mus musculus epidermal growth fact... 70 1e-10
AF385682_1(AF385682|pid:none) Mus musculus ETL1 mRNA, complete c... 70 1e-10
V00741_1(V00741|pid:none) Mouse mRNA encoding the precursor of t... 70 1e-10
(P01133) RecName: Full=Pro-epidermal growth factor; Sho... 70 1e-10
(P98157) RecName: Full=Low-density lipoprotein receptor-related ... 70 2e-10
AC117075_41(AC117075|pid:none) Dictyostelium discoideum chromoso... 70 2e-10
(Q4V7M2) RecName: Full=Cysteine-rich with EGF-like domain protei... 70 2e-10
L33861_1(L33861|pid:none) Sea urchin fibropellin Ia mRNA, 3' end. 70 2e-10
BC128368_1(BC128368|pid:none) Mus musculus cartilage oligomeric ... 70 3e-10
(Q9R0G6) RecName: Full=Cartilage oligomeric matrix protein; ... 70 3e-10
AF257516_1(AF257516|pid:none) Mus musculus cartilage oligomeric ... 70 3e-10
AF152393_1(AF152393|pid:none) Mus musculus thrombospondin 4 gene... 70 3e-10
BC128369_1(BC128369|pid:none) Mus musculus cartilage oligomeric ... 70 3e-10
AB174356_1(AB174356|pid:none) Macaca fascicularis brain cDNA clo... 70 3e-10
AL606536_6(AL606536|pid:none) Mouse DNA sequence from clone RP23... 70 3e-10
AK055722_1(AK055722|pid:none) Homo sapiens cDNA FLJ31160 fis, cl... 70 3e-10
(Q9Z1T2) RecName: Full=Thrombospondin-4; Flags: Precursor; &AF1... 70 3e-10
AK136439_1(AK136439|pid:none) Mus musculus adult male colon cDNA... 69 3e-10
AM403063_1(AM403063|pid:none) Blattella germanica mRNA for lipop... 69 3e-10
AM403064_1(AM403064|pid:none) Blattella germanica mRNA for lipop... 69 3e-10
AF305875_1(AF305875|pid:none) Drosophila melanogaster putative t... 69 3e-10
BX883044_5(BX883044|pid:none) Rattus norvegicus chromosome 20, m... 69 4e-10
AJ879619_2(AJ879619|pid:none) Solea senegalensis mRNA for very l... 69 4e-10
AJ879619_1(AJ879619|pid:none) Solea senegalensis mRNA for very l... 69 4e-10
BC083857_1(BC083857|pid:none) Rattus norvegicus CD97 molecule, m... 69 4e-10
(P49013) RecName: Full=Fibropellin-3; AltName: Full=Fibropellin ... 69 4e-10
AK159816_1(AK159816|pid:none) Mus musculus osteoclast-like cell ... 69 4e-10
AL365215_3(AL365215|pid:none) Human DNA sequence from clone RP11... 69 4e-10
(Q9NTA7) RecName: Full=Sushi domain-containing protein 1; Flags:... 69 6e-10

>AC116982_41(AC116982|pid:none) Dictyostelium discoideum chromosome 2
map 3622643-3879522 strain AX4, complete sequence.
Length = 989

Score = 135 bits (339), Expect = 5e-30
Identities = 96/262 (36%), Positives = 119/262 (45%), Gaps = 13/262 (4%)
Frame = +3

Query: 600 LDLMVRFIKLTPLKKEWILNSTFENEM----------IFEQTISHDSNCKIITHFQEIKD 749
+D+ +K L K WI N T ENE+ + T + + C I + +EIKD
Sbjct: 732 VDINNNEVKSYSLLKNWIFNKT-ENEIEPNKYILKQQLVNNTSTTSNGCIITSTIEEIKD 790

Query: 750 EK-KAFQFANEQFYLEKGSIKVTIKVTKYDYXXXXXXXXXXXXXXXXXQDQNRNDCNSKD 926
+ K F FA F + GSIK TI + Y Y D+ N+CNSKD
Sbjct: 791 KNGKEFTFAGTSFVVSSGSIKFTISIANYTYQSNLNTLKLELISSVDKIDKI-NNCNSKD 849

Query: 927 IDIEDINSPAXXXXXXXXXXXXXXXXXGRFLNKLLSDNRETFFSTENIKDLESNSITTLL 1106
+I+ N GRF+NK+LSD R TFF+T D SNSI L
Sbjct: 850 TEIDTTNVNDISTFNYIKISKNKNIFSGRFINKVLSDGRSTFFTTSARND--SNSIIVSL 907

Query: 1107 KLPHFNNECIIDPDFSVLLSTDFKENCKED--NRKWXXXXXXXXXXXXXXXXXXXXXXXY 1280
LPH NEC+IDPDFSVLLS DFK C +D +RKW Y
Sbjct: 908 NLPHCINECLIDPDFSVLLSNDFKSECGDDDSSRKWFLPVVVVVPVVGFALILIILLIIY 967

Query: 1281 KKSTTVKIGLKKFKSIKLNSMK 1346
KKSTT KI L K KL + K
Sbjct: 968 KKSTTFKIILHATKLKKLKNNK 989

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,778,452,338
Number of extensions: 35223427
Number of successful extensions: 110111
Number of sequences better than 10.0: 1953
Number of HSP's gapped: 94561
Number of HSP's successfully gapped: 6851
Length of query: 483
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 350
Effective length of database: 620,718,517
Effective search space: 217251480950
Effective search space used: 217251480950
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.58 gvh: 0.36 alm: 0.15 top: 0.93 tms: 0.07 mit: 0.20 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.04 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 1.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

24.0 %: cytoplasmic
16.0 %: nuclear
16.0 %: vesicles of secretory system
12.0 %: Golgi
12.0 %: mitochondrial
8.0 %: endoplasmic reticulum
4.0 %: extracellular, including cell wall
4.0 %: cytoskeletal
4.0 %: plasma membrane

>> prediction for Contig-U11914-1 is cyt

VS (DIR, S) 0
VH (FL, L) 1
VF (FL, S) 0
AH (FL, L) 1
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 2
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0