Contig-U11906-1
Contig ID Contig-U11906-1
Contig update 2002.12.18
Contig sequence
>Contig-U11906-1 (Contig-U11906-1Q) /CSM_Contig/Contig-U11906-1Q.Seq.d
ACTGTTGGCCTACTGGNATTCAAATTTCTGATTTTTTATTTATAATTCTA
CAACATAGNATAATAATAATAATTTACAGATTAAACAGTAATATAACAAA
AATAAATAATAATAATAATAAATTAAATAATTTATAATAAAAAAAATATA
AATTTTTTTTTTTTTTTNNNNNNNNN----------ATAAATTTTAACTT
AAAATCGCCAATCATTTTTATTTTATAAATTTTAACTTAAAACCCAAAAA
ATTCTTAAAAATAATATTACAAATAAAATTATAATATCTCATAATAAACT
ATATTCCCTTTTTCATTGCTTTTTTTTTAAAATTTTATTTTTAAAAAAAT
TTAATATTAATATAGAAAAAAAAAAATAAAAAAAATAAAAAAAATTTTAA
GTAATTGTTTTTTTAAAAAATAAAAATGCGATTAAATTTAATATCGTTTT
TTATAATATTTACTATTTTAGTTTCTATTTCAAATTCTCAGGAATTTAGA
TCATATACCGGTGAAGGAAATAATAAACAAAATCCAAAACAAGGTTCAAT
TTTTACTCCATTTATTAGACTTGCAAATCCAATTAAATTTAATAAAAATG
GATTTCCAAATATAACGAATCAACCATCAAGAGCAATTAGTAATATAATA
TTTGATCAACAAACTCATATTGGTTCAAAAGAACATTTAACTGATATGTT
TAATATGTGGGGTCAATTTTTAATTCATAATATGGCATTATCAAAACCAG
AACCAAATTCATGGCCAATTAAAGTACCAAAATGTGATCAATATTTTGAT
CCAGCATGTATTGGTAATAAAACAATGAATTATTTTAGAACTAGAGCTAC
AGAAGTACCATGTGATGTAGGTAAAACCGTAGTTGATGAAGATGGTAAAT
GTTATGAACAAATTAATAGTTTAGGATCCTATATAGATGGTAATGTACTA
TATGGAAATTCAGAAGAGATTTGTAAGAATTTAAGATCACTAAGTGGTGG
TGAAATGAAAATGACAGTAACAGATGTTGGTGATTTACCACCAAAGAATG
TCCCAGGTGTACCAATGGATAACGATGCAAATTTATTCCCAATCGATCAA
TTGTATAGTGTTGGTGAGAGAAGAGGTAATGAAAATCCAGGATTACTATC
AATTCATACATTACTACTTAGAGATCATAATAGATTAGCTAGAAAATTTG
CAAGATTACATCCAGAATGGGATGATGAAAGAGTTTTCCAACAATCACGT
TCATGTATAATTGAACAAATTCAAAAGATTACCTATGATGAATATTTACC
AACTACTTTAGGTTCCTTCCCATCTTATACAGGCTACGATGCAAATGTGA
ATGCACAAGTTTCAAATGAATTTACAACTACAGCATTTAGATTTGGTCAT
AGTGAAGTTGGACCATTTATGGAATATTATTCAGAGAATGGTACTCGTCT
TCAACCATTACCAATTAAATTCTCTTATTTCAATCCTCATGCTCTTAATA
GAGGTGTTGAACCATTAATTCGTGGTTTAATTATCAATGAAGAAGAAAAT
ATCGATATCTATATGATTAGTGATTTAAGAAACTTTTTATTTGGTAAACC
AGGTCAAGGTGGTTTAGATTTAGCAAGTAGAAATTTACAAAGAAATCGTG
ATCATGGTATTCCACCATATAACTCATTAAGACGTCAGTTAGGTCTTCGT
CCAGTTCAAACTTGGTCTGATATCACCTCTGATCCACAAATTCAAAATCG
TTTAAAAAATGCTTACAAATCAGTAGATGATATCGACTCTTATGTCGGTG
GTTTAGCAGAAGATCATATGGAAGGTAGTTGTGTTGGTCAAACTTTTTAT
CTCATCATCTATGAACAATTCTTTAGAACTAGAGCTGGTGATAGATTTTG
GTATGAAACTCCTGAAATGAGAATGGTAAATCGTGAATGTGAAACTACAA
CATTTGCTGAAGTAATTAAAAGAACAACTTCAAATATTGGTTATGTTCAA
CCAAATGTTTTTAGAAAATAAATAATAATAAAAATAATAATAAAATAATA
ATAATAATAAAATTAATAATTAAAAATATATAAAAAAAATAAAAAAAAAA
AAAATAAAATAAAATATTTTAGAAAATATATT

Gap gap included
Contig length 2122
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 7837785
End point 7835689
Strand (PLUS/MINUS) MINUS
Number of clones 3
Number of EST 5
Link to clone list U11906
List of clone(s)

est1=CHP442F,1,167
est2=CHG550F,168,596
est3=SSF584E,300,2114
est4=CHG550Z,1439,1817
est5=CHP442Z,1714,1940
Translated Amino Acid sequence
tvgllxfkflifyl*fynix****ftd*tvi*qk*iiiiin*IIYNKKNINFFFFXXX--
-

---INFNLKSPIIFIL*ilt*npkns*k*yyk*nynis**tifpfsllff*nfifkki*y
*yrkkkikkikkilsncffkk*kcd*i*yrfl*yllf*flfqilrnldhipvkeiinkiq
nkvqfllhlldlqiqlnlikmdfqi*rinhqeqlvi*ylinklilvqkni*liclicgvn
f*fiiwhyqnqnqihgqlkyqnviniliqhvlvikq*iilelelqkyhvm*vkp*lmkmv
nvmnkliv*dpi*mvmyymeiqkrfvri*dh*vvvk*k*q*qmlviyhqrmsqvyqwitm
qiysqsincivlvreevmkiqdyyqfihyyleiiid*lenlqdyiqngmmkefsnnhvhv
*lnkfkrlpmmniyqll*vpshliqatmqm*mhkfqmnlqlqhldlvivkldhlwniiqr
mvlvfnhyqlnslisilmllievlnh*fvv*lsmkkkisisi*lvi*etfylvnqvkvv*
i*qveiykeivimvfhhith*dvs*vfvqfklglisplihkfkiv*kmltnq*mistlms
vv*qkiiwkvvvlvklfisssmnnslelelvidfgmkllk*ew*ivnvklqhllk*lkeq
lqilvmfnqmflenk***k***nnnnnkinn*kyikkikkkkik*nileni


Translated Amino Acid sequence (All Frames)
Frame A:
tvgllxfkflifyl*fynix****ftd*tvi*qk*iiiiin*IIYNKKNINFFFFXXX--
-

---INFNLKSPIIFIL*ilt*npkns*k*yyk*nynis**tifpfsllff*nfifkki*y
*yrkkkikkikkilsncffkk*kcd*i*yrfl*yllf*flfqilrnldhipvkeiinkiq
nkvqfllhlldlqiqlnlikmdfqi*rinhqeqlvi*ylinklilvqkni*liclicgvn
f*fiiwhyqnqnqihgqlkyqnviniliqhvlvikq*iilelelqkyhvm*vkp*lmkmv
nvmnkliv*dpi*mvmyymeiqkrfvri*dh*vvvk*k*q*qmlviyhqrmsqvyqwitm
qiysqsincivlvreevmkiqdyyqfihyyleiiid*lenlqdyiqngmmkefsnnhvhv
*lnkfkrlpmmniyqll*vpshliqatmqm*mhkfqmnlqlqhldlvivkldhlwniiqr
mvlvfnhyqlnslisilmllievlnh*fvv*lsmkkkisisi*lvi*etfylvnqvkvv*
i*qveiykeivimvfhhith*dvs*vfvqfklglisplihkfkiv*kmltnq*mistlms
vv*qkiiwkvvvlvklfisssmnnslelelvidfgmkllk*ew*ivnvklqhllk*lkeq
lqilvmfnqmflenk***k***nnnnnkinn*kyikkikkkkik*nileni

Frame B:
llaywxsnf*ffiynstt*xnnnnlqikq*ynknk*****ik*fiikki*iffffxxx--
-

---*ilt*nrqsflfykf*lktqkilknnitnkiiishnklyslfhcfffkilflkkfni
niekkk*kk*kkf*vivflknknaikfnivfyniyyfsfyfkfsgi*iiyr*rk**tksk
trfnfysiy*tcksn*i**kwiskynestiksn**yni*stnsywfkrtfn*yv*yvgsi
fns*ygiiktrtkfman*stkm*sif*ssmyw**nnelf*n*syrstm*cr*nrs**rw*
ml*tn**frilyrw*ctiwkfrrdl*efkitkww*nendsnrcw*fttkecprctng*rc
kfipnrsiv*cw*ekr**ksritinsyitt*rs**is*kickitsrmg**ksfptitfmy
n*tnskdyl**iftnyfrflpilyrlrckcectsfk*iynysi*iws**swtiygilfre
wyssstitn*illfqsscs**rc*tinswfnyq*rrkyrylyd**fkklfiw*trsrwfr
fsk*kftkks*swysti*liktsvrsssssnlv*yhl*stnsksfkkclqisr*yrllcr
wfsrrsygr*lcwsnflshhl*til*n*sw**ilv*ns*nengks*m*nynic*sn*knn
fkywlcstkcf*kinnnknnnkiiiiikliikni*kk*kkkk*nkif*kiy

Frame C:
cwptgiqisdflfiilqhxiiiiiyrlnsnitkinnnnnklnnl**kkykfffffxxx--
-

---kf*lkianhfyfinfnlkpkkflkiilqikl*yliinyipffiafflkfyf*knlil
i*kkknkknkknfk*lff*kikmrlnlisffiiftilvsisnsqefrsytgegnnkqnpk
qgsiftpfirlanpikfnkngfpnitnqpsraisniifdqqthigskehltdmfnmwgqf
lihnmalskpepnswpikvpkcdqyfdpacignktmnyfrtratevpcdvgktvvdedgk
cyeqinslgsyidgnvlygnseeicknlrslsggemkmtvtdvgdlppknvpgvpmdnda
nlfpidqlysvgerrgnenpgllsihtlllrdhnrlarkfarlhpewddervfqqsrsci
ieqiqkitydeylpttlgsfpsytgydanvnaqvsneftttafrfghsevgpfmeyysen
gtrlqplpikfsyfnphalnrgveplirgliineeenidiymisdlrnflfgkpgqggld
lasrnlqrnrdhgippynslrrqlglrpvqtwsditsdpqiqnrlknayksvddidsyvg
glaedhmegscvgqtfyliiyeqffrtragdrfwyetpemrmvnrecetttfaevikrtt
snigyvqpnvfrk*iiikiiik*****n**lkiykknkkkknkikyfrkyi

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11906-1 (Contig-U11906-1Q)
/CSM_Contig/Contig-U11906-1Q.Seq.d
(2132 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11906-1 (Contig-U11906-1Q) /CSM_Contig/Conti... 3096 0.0
Contig-U12103-1 (Contig-U12103-1Q) /CSM_Contig/Conti... 40 0.010
Contig-U10300-1 (Contig-U10300-1Q) /CSM_Contig/Conti... 40 0.010
Contig-U11090-1 (Contig-U11090-1Q) /CSM_Contig/Conti... 38 0.038
Contig-U11087-1 (Contig-U11087-1Q) /CSM_Contig/Conti... 38 0.038
Contig-U10880-1 (Contig-U10880-1Q) /CSM_Contig/Conti... 38 0.038
Contig-U09067-1 (Contig-U09067-1Q) /CSM_Contig/Conti... 38 0.038
Contig-U04680-1 (Contig-U04680-1Q) /CSM_Contig/Conti... 38 0.038
Contig-U00011-1 (Contig-U00011-1Q) /CSM_Contig/Conti... 38 0.038
Contig-U13909-1 (Contig-U13909-1Q) /CSM_Contig/Conti... 36 0.15

>Contig-U11906-1 (Contig-U11906-1Q) /CSM_Contig/Contig-U11906-1Q.Seq.d
Length = 2132

Score = 3096 bits (1562), Expect = 0.0
Identities = 1562/1562 (100%)
Strand = Plus / Plus


Query: 453 ataatatttactattttagtttctatttcaaattctcaggaatttagatcatataccggt 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ataatatttactattttagtttctatttcaaattctcaggaatttagatcatataccggt 512


Query: 513 gaaggaaataataaacaaaatccaaaacaaggttcaatttttactccatttattagactt 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gaaggaaataataaacaaaatccaaaacaaggttcaatttttactccatttattagactt 572


Query: 573 gcaaatccaattaaatttaataaaaatggatttccaaatataacgaatcaaccatcaaga 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gcaaatccaattaaatttaataaaaatggatttccaaatataacgaatcaaccatcaaga 632


Query: 633 gcaattagtaatataatatttgatcaacaaactcatattggttcaaaagaacatttaact 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gcaattagtaatataatatttgatcaacaaactcatattggttcaaaagaacatttaact 692


Query: 693 gatatgtttaatatgtggggtcaatttttaattcataatatggcattatcaaaaccagaa 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 gatatgtttaatatgtggggtcaatttttaattcataatatggcattatcaaaaccagaa 752


Query: 753 ccaaattcatggccaattaaagtaccaaaatgtgatcaatattttgatccagcatgtatt 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ccaaattcatggccaattaaagtaccaaaatgtgatcaatattttgatccagcatgtatt 812


Query: 813 ggtaataaaacaatgaattattttagaactagagctacagaagtaccatgtgatgtaggt 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 ggtaataaaacaatgaattattttagaactagagctacagaagtaccatgtgatgtaggt 872


Query: 873 aaaaccgtagttgatgaagatggtaaatgttatgaacaaattaatagtttaggatcctat 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 aaaaccgtagttgatgaagatggtaaatgttatgaacaaattaatagtttaggatcctat 932


Query: 933 atagatggtaatgtactatatggaaattcagaagagatttgtaagaatttaagatcacta 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 atagatggtaatgtactatatggaaattcagaagagatttgtaagaatttaagatcacta 992


Query: 993 agtggtggtgaaatgaaaatgacagtaacagatgttggtgatttaccaccaaagaatgtc 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 agtggtggtgaaatgaaaatgacagtaacagatgttggtgatttaccaccaaagaatgtc 1052


Query: 1053 ccaggtgtaccaatggataacgatgcaaatttattcccaatcgatcaattgtatagtgtt 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 ccaggtgtaccaatggataacgatgcaaatttattcccaatcgatcaattgtatagtgtt 1112


Query: 1113 ggtgagagaagaggtaatgaaaatccaggattactatcaattcatacattactacttaga 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 ggtgagagaagaggtaatgaaaatccaggattactatcaattcatacattactacttaga 1172


Query: 1173 gatcataatagattagctagaaaatttgcaagattacatccagaatgggatgatgaaaga 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 gatcataatagattagctagaaaatttgcaagattacatccagaatgggatgatgaaaga 1232


Query: 1233 gttttccaacaatcacgttcatgtataattgaacaaattcaaaagattacctatgatgaa 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1233 gttttccaacaatcacgttcatgtataattgaacaaattcaaaagattacctatgatgaa 1292


Query: 1293 tatttaccaactactttaggttccttcccatcttatacaggctacgatgcaaatgtgaat 1352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1293 tatttaccaactactttaggttccttcccatcttatacaggctacgatgcaaatgtgaat 1352


Query: 1353 gcacaagtttcaaatgaatttacaactacagcatttagatttggtcatagtgaagttgga 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1353 gcacaagtttcaaatgaatttacaactacagcatttagatttggtcatagtgaagttgga 1412


Query: 1413 ccatttatggaatattattcagagaatggtactcgtcttcaaccattaccaattaaattc 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1413 ccatttatggaatattattcagagaatggtactcgtcttcaaccattaccaattaaattc 1472


Query: 1473 tcttatttcaatcctcatgctcttaatagaggtgttgaaccattaattcgtggtttaatt 1532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1473 tcttatttcaatcctcatgctcttaatagaggtgttgaaccattaattcgtggtttaatt 1532


Query: 1533 atcaatgaagaagaaaatatcgatatctatatgattagtgatttaagaaactttttattt 1592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1533 atcaatgaagaagaaaatatcgatatctatatgattagtgatttaagaaactttttattt 1592


Query: 1593 ggtaaaccaggtcaaggtggtttagatttagcaagtagaaatttacaaagaaatcgtgat 1652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1593 ggtaaaccaggtcaaggtggtttagatttagcaagtagaaatttacaaagaaatcgtgat 1652


Query: 1653 catggtattccaccatataactcattaagacgtcagttaggtcttcgtccagttcaaact 1712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1653 catggtattccaccatataactcattaagacgtcagttaggtcttcgtccagttcaaact 1712


Query: 1713 tggtctgatatcacctctgatccacaaattcaaaatcgtttaaaaaatgcttacaaatca 1772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1713 tggtctgatatcacctctgatccacaaattcaaaatcgtttaaaaaatgcttacaaatca 1772


Query: 1773 gtagatgatatcgactcttatgtcggtggtttagcagaagatcatatggaaggtagttgt 1832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1773 gtagatgatatcgactcttatgtcggtggtttagcagaagatcatatggaaggtagttgt 1832


Query: 1833 gttggtcaaactttttatctcatcatctatgaacaattctttagaactagagctggtgat 1892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1833 gttggtcaaactttttatctcatcatctatgaacaattctttagaactagagctggtgat 1892


Query: 1893 agattttggtatgaaactcctgaaatgagaatggtaaatcgtgaatgtgaaactacaaca 1952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1893 agattttggtatgaaactcctgaaatgagaatggtaaatcgtgaatgtgaaactacaaca 1952


Query: 1953 tttgctgaagtaattaaaagaacaacttcaaatattggttatgttcaaccaaatgttttt 2012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1953 tttgctgaagtaattaaaagaacaacttcaaatattggttatgttcaaccaaatgttttt 2012


Query: 2013 ag 2014
||
Sbjct: 2013 ag 2014


Score = 115 bits (58), Expect = 2e-25
Identities = 64/64 (100%)
Strand = Plus / Plus


Query: 1 actgttggcctactggnattcaaatttctgattttttatttataattctacaacatagna 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgttggcctactggnattcaaatttctgattttttatttataattctacaacatagna 60


Query: 61 taat 64
||||
Sbjct: 61 taat 64


Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus


Query: 2105 taaaataaaatattttagaaaatatatt 2132
||||||||||||||||||||||||||||
Sbjct: 2105 taaaataaaatattttagaaaatatatt 2132


Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 287 tctcataataaactatattccc 308
||||||||||||||||||||||
Sbjct: 287 tctcataataaactatattccc 308


>Contig-U12103-1 (Contig-U12103-1Q) /CSM_Contig/Contig-U12103-1Q.Seq.d
Length = 1597

Score = 40.1 bits (20), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 1 actgttggcctactggnattcaa 23
|||||||||||||||||||||||
Sbjct: 1 actgttggcctactggnattcaa 23


Score = 30.2 bits (15), Expect = 9.4
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1125 ggtaatgaaaatcca 1139
|||||||||||||||
Sbjct: 222 ggtaatgaaaatcca 236


>Contig-U10300-1 (Contig-U10300-1Q) /CSM_Contig/Contig-U10300-1Q.Seq.d
Length = 1178

Score = 40.1 bits (20), Expect = 0.010
Identities = 25/27 (92%)
Strand = Plus / Plus


Query: 1 actgttggcctactggnattcaaattt 27
|||||||||||||||| ||| ||||||
Sbjct: 2 actgttggcctactggaatttaaattt 28


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 28,331
Number of Sequences: 6905
Number of extensions: 28331
Number of successful extensions: 3260
Number of sequences better than 10.0: 658
length of query: 2132
length of database: 5,674,871
effective HSP length: 16
effective length of query: 2116
effective length of database: 5,564,391
effective search space: 11774251356
effective search space used: 11774251356
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.27
Homology vs DNA
Query= Contig-U11906-1 (Contig-U11906-1Q) /CSM_Contig/Contig-U11906-1Q.Seq.d
(2132 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AY392429) Dictyostelium discoideum peroxinectin gene, compl... 2573 0.0 1
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 2573 0.0 1
(C93038) Dictyostelium discoideum slug cDNA, clone SSF584. 938 0.0 2
(BJ379640) Dictyostelium discoideum cDNA clone:ddc35c13, 3' ... 694 0.0 2
(BJ383224) Dictyostelium discoideum cDNA clone:ddc52d12, 3' ... 317 2e-93 2
(BJ365477) Dictyostelium discoideum cDNA clone:ddc35c13, 5' ... 208 6e-49 1
(BJ369861) Dictyostelium discoideum cDNA clone:ddc52d12, 5' ... 109 4e-19 1
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 40 0.002 17
(EJ042392) 1095454099253 Global-Ocean-Sampling_GS-26-01-01-1... 36 0.069 2
(CR940348) Theileria annulata genomic DNA chromosome 2. 50 0.35 1
(EK578404) 1095521377830 Global-Ocean-Sampling_GS-32-01-01-1... 50 0.35 1
(EK568607) 1095521057887 Global-Ocean-Sampling_GS-32-01-01-1... 50 0.35 1
(AQ827751) HS_5314_A2_G07_T7A RPCI-11 Human Male BAC Library... 34 0.99 2
(AM487835) Vitis vinifera, whole genome shotgun sequence, co... 48 1.4 1
(AC213015) Populus trichocarpa clone POP034-G19, complete se... 48 1.4 1
(U23520) Caenorhabditis elegans cosmid C35B8, complete seque... 48 1.4 1
(AC087507) Homo sapiens chromosome 18, clone RP11-748I20, co... 48 1.4 1
(AC079839) Homo sapiens BAC clone RP11-1152J17 from 2, compl... 48 1.4 1
(AC068520) Homo sapiens chromosome 2 clone RP11-656O23 map 2... 48 1.4 1
(AC068487) Homo sapiens chromosome 2 clone RP11-649I1, WORKI... 48 1.4 1
(AP001797) Homo sapiens genomic DNA, chromosome 18q12 clone:... 48 1.4 1
(EI087646) hhe0001cg12.g1 hhe Oryza ridleyi genomic clone hh... 48 1.4 1
(CV989784) IpCGFr1_36_A01_23 IpCGFr1 Ictalurus punctatus cDN... 48 1.4 1
(BJ363867) Dictyostelium discoideum cDNA clone:ddc28l19, 5' ... 48 1.4 1
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 38 1.6 12
(AF494520) Tomato big bud phytoplasma ATP dependent RNA heli... 34 3.5 2
(BJ338512) Dictyostelium discoideum cDNA clone:dda61g19, 5' ... 38 3.6 2
(BX927396) Zebrafish DNA sequence from clone DKEY-216H18 in ... 46 5.5 1
(BX255919) Zebrafish DNA sequence from clone DKEY-259P11 in ... 46 5.5 1
(AP008209) Oryza sativa (japonica cultivar-group) genomic DN... 46 5.5 1
(AC144427) Oryza sativa Japonica Group chromosome 3 clone OS... 46 5.5 1
(AC125784) Genomic sequence for Oryza sativa, Nipponbare str... 46 5.5 1
(DD010736) Diagnosis of known genetic Parameters within the ... 46 5.5 1
(CQ572345) Sequence 103 from Patent WO0171042. 46 5.5 1
(AX344572) Sequence 23 from Patent WO0200932. 46 5.5 1
(AC183566) Canis familiaris chromosome 16, clone XX-297F20, ... 46 5.5 1
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 46 5.5 1
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 46 5.5 1
(AC011905) Drosophila melanogaster 3L BAC RP98-27A3 (Roswell... 46 5.5 1
(AC145423) Homo sapiens clone RP11-972P1, WORKING DRAFT SEQU... 46 5.5 1
(AC137629) Homo sapiens clone RP11-525N13, WORKING DRAFT SEQ... 46 5.5 1
(CU855541) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 5.5 1
(AC211605) Oryza glaberrima clone OG_BBa0042A24, *** SEQUENC... 46 5.5 1
(AC201535) Strongylocentrotus purpuratus clone R3-3096B6, WO... 46 5.5 1
(AC196376) Macaca mulatta clone CH250-173C6, WORKING DRAFT S... 46 5.5 1
(AC193797) Pan troglodytes chromosome 12 clone CH251-583M18,... 46 5.5 1
(AC177957) Strongylocentrotus purpuratus clone R3-3049D9, WO... 46 5.5 1
(AC171221) Bos taurus clone CH240-280G10, WORKING DRAFT SEQU... 46 5.5 1
(AC019531) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 46 5.5 1
(FH580383) CHO_OF4249xk08f1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 5.5 1
(EJ965908) 1093022041728 Global-Ocean-Sampling_GS-30-02-01-1... 46 5.5 1
(AQ191316) HS_3234_A1_A10_MR CIT Approved Human Genomic Sper... 46 5.5 1
(CL633303) CH243-7I12.SP6 CHORI-243 Ovis aries genomic clone... 46 5.5 1
(DV889278) LB02713.CR_C22 GC_BGC-27 Bos taurus cDNA clone IM... 46 5.5 1
(AI734180) ab13h04.y5 Stratagene lung (#937210) Homo sapiens... 46 5.5 1
(AI732793) ab13h04.x5 Stratagene lung (#937210) Homo sapiens... 46 5.5 1
(BJ370274) Dictyostelium discoideum cDNA clone:ddc53e13, 5' ... 46 5.5 1
(AA487865) ab13h04.s1 Stratagene lung (#937210) Homo sapiens... 46 5.5 1
(AA487864) ab13h04.r1 Stratagene lung (#937210) Homo sapiens... 46 5.5 1
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 38 5.8 8
(BJ396610) Dictyostelium discoideum cDNA clone:dds43e08, 5' ... 40 7.2 2
(BZ710293) OGEAK87TC ZM_0.7_1.5_KB Zea mays genomic clone ZM... 38 7.3 3
(AC068132) Homo sapiens chromosome 21 clone RP11-753B2, WORK... 36 7.4 5
(AM606867) Entamoeba invadens IP1 GSS, clone inv072g07.q1k. 38 8.0 2
(BX548174) Prochlorococcus marinus MED4 complete genome. 34 8.4 2
(CJ475024) Macaca fascicularis mRNA, clone: QorA-15234, 5' e... 38 9.0 2
(CJ462133) Macaca fascicularis mRNA, clone: QmoA-15191, 5' e... 38 9.2 2
(CJ458236) Macaca fascicularis mRNA, clone: QmoA-10173, 5' e... 38 9.3 2
(FF078717) G1045P337RI19.T0 Aplysia californica Pooled Norma... 36 9.4 2
(CJ478574) Macaca fascicularis mRNA, clone: QtrA-13665, 5' e... 38 9.4 2
(CJ480628) Macaca fascicularis mRNA, clone: QtrA-16153, 5' e... 38 9.4 2
(CJ447634) Macaca fascicularis mRNA, clone: QflA-12973, 5' e... 38 9.4 2
(AZ536338) ENTBN59TF Entamoeba histolytica Sheared DNA Entam... 40 9.5 3
(CJ473811) Macaca fascicularis mRNA, clone: QorA-13855, 5' e... 38 9.7 2
(FF078043) G1045P319RK19.T0 Aplysia californica Pooled Norma... 36 10.0 2

>(AY392429) Dictyostelium discoideum peroxinectin gene, complete cds.
Length = 3100

Score = 2573 bits (1298), Expect = 0.0
Identities = 1298/1298 (100%)
Strand = Plus / Plus


Query: 717 tttttaattcataatatggcattatcaaaaccagaaccaaattcatggccaattaaagta 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 tttttaattcataatatggcattatcaaaaccagaaccaaattcatggccaattaaagta 1055


Query: 777 ccaaaatgtgatcaatattttgatccagcatgtattggtaataaaacaatgaattatttt 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 ccaaaatgtgatcaatattttgatccagcatgtattggtaataaaacaatgaattatttt 1115


Query: 837 agaactagagctacagaagtaccatgtgatgtaggtaaaaccgtagttgatgaagatggt 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1116 agaactagagctacagaagtaccatgtgatgtaggtaaaaccgtagttgatgaagatggt 1175


Query: 897 aaatgttatgaacaaattaatagtttaggatcctatatagatggtaatgtactatatgga 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1176 aaatgttatgaacaaattaatagtttaggatcctatatagatggtaatgtactatatgga 1235


Query: 957 aattcagaagagatttgtaagaatttaagatcactaagtggtggtgaaatgaaaatgaca 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1236 aattcagaagagatttgtaagaatttaagatcactaagtggtggtgaaatgaaaatgaca 1295


Query: 1017 gtaacagatgttggtgatttaccaccaaagaatgtcccaggtgtaccaatggataacgat 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1296 gtaacagatgttggtgatttaccaccaaagaatgtcccaggtgtaccaatggataacgat 1355


Query: 1077 gcaaatttattcccaatcgatcaattgtatagtgttggtgagagaagaggtaatgaaaat 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1356 gcaaatttattcccaatcgatcaattgtatagtgttggtgagagaagaggtaatgaaaat 1415


Query: 1137 ccaggattactatcaattcatacattactacttagagatcataatagattagctagaaaa 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1416 ccaggattactatcaattcatacattactacttagagatcataatagattagctagaaaa 1475


Query: 1197 tttgcaagattacatccagaatgggatgatgaaagagttttccaacaatcacgttcatgt 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1476 tttgcaagattacatccagaatgggatgatgaaagagttttccaacaatcacgttcatgt 1535


Query: 1257 ataattgaacaaattcaaaagattacctatgatgaatatttaccaactactttaggttcc 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1536 ataattgaacaaattcaaaagattacctatgatgaatatttaccaactactttaggttcc 1595


Query: 1317 ttcccatcttatacaggctacgatgcaaatgtgaatgcacaagtttcaaatgaatttaca 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1596 ttcccatcttatacaggctacgatgcaaatgtgaatgcacaagtttcaaatgaatttaca 1655


Query: 1377 actacagcatttagatttggtcatagtgaagttggaccatttatggaatattattcagag 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1656 actacagcatttagatttggtcatagtgaagttggaccatttatggaatattattcagag 1715


Query: 1437 aatggtactcgtcttcaaccattaccaattaaattctcttatttcaatcctcatgctctt 1496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1716 aatggtactcgtcttcaaccattaccaattaaattctcttatttcaatcctcatgctctt 1775


Query: 1497 aatagaggtgttgaaccattaattcgtggtttaattatcaatgaagaagaaaatatcgat 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1776 aatagaggtgttgaaccattaattcgtggtttaattatcaatgaagaagaaaatatcgat 1835


Query: 1557 atctatatgattagtgatttaagaaactttttatttggtaaaccaggtcaaggtggttta 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1836 atctatatgattagtgatttaagaaactttttatttggtaaaccaggtcaaggtggttta 1895


Query: 1617 gatttagcaagtagaaatttacaaagaaatcgtgatcatggtattccaccatataactca 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1896 gatttagcaagtagaaatttacaaagaaatcgtgatcatggtattccaccatataactca 1955


Query: 1677 ttaagacgtcagttaggtcttcgtccagttcaaacttggtctgatatcacctctgatcca 1736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1956 ttaagacgtcagttaggtcttcgtccagttcaaacttggtctgatatcacctctgatcca 2015


Query: 1737 caaattcaaaatcgtttaaaaaatgcttacaaatcagtagatgatatcgactcttatgtc 1796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2016 caaattcaaaatcgtttaaaaaatgcttacaaatcagtagatgatatcgactcttatgtc 2075


Query: 1797 ggtggtttagcagaagatcatatggaaggtagttgtgttggtcaaactttttatctcatc 1856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2076 ggtggtttagcagaagatcatatggaaggtagttgtgttggtcaaactttttatctcatc 2135


Query: 1857 atctatgaacaattctttagaactagagctggtgatagattttggtatgaaactcctgaa 1916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2136 atctatgaacaattctttagaactagagctggtgatagattttggtatgaaactcctgaa 2195


Query: 1917 atgagaatggtaaatcgtgaatgtgaaactacaacatttgctgaagtaattaaaagaaca 1976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2196 atgagaatggtaaatcgtgaatgtgaaactacaacatttgctgaagtaattaaaagaaca 2255


Query: 1977 acttcaaatattggttatgttcaaccaaatgtttttag 2014
||||||||||||||||||||||||||||||||||||||
Sbjct: 2256 acttcaaatattggttatgttcaaccaaatgtttttag 2293

Score = 450 bits (227), Expect(4) = e-127
Identities = 227/227 (100%)
Strand = Plus / Plus


Query: 490 aggaatttagatcatataccggtgaaggaaataataaacaaaatccaaaacaaggttcaa 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 aggaatttagatcatataccggtgaaggaaataataaacaaaatccaaaacaaggttcaa 748


Query: 550 tttttactccatttattagacttgcaaatccaattaaatttaataaaaatggatttccaa 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tttttactccatttattagacttgcaaatccaattaaatttaataaaaatggatttccaa 808


Query: 610 atataacgaatcaaccatcaagagcaattagtaatataatatttgatcaacaaactcata 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 atataacgaatcaaccatcaagagcaattagtaatataatatttgatcaacaaactcata 868


Query: 670 ttggttcaaaagaacatttaactgatatgtttaatatgtggggtcaa 716
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 ttggttcaaaagaacatttaactgatatgtttaatatgtggggtcaa 915

Score = 38.2 bits (19), Expect(4) = e-127
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 471 gtttctatttcaaattctc 489
|||||||||||||||||||
Sbjct: 517 gtttctatttcaaattctc 535

Score = 36.2 bits (18), Expect(4) = e-127
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 2115 tattttagaaaatatatt 2132
||||||||||||||||||
Sbjct: 2394 tattttagaaaatatatt 2411

Score = 30.2 bits (15), Expect(4) = e-127
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 834 tttagaactagagct 848
|||||||||||||||
Sbjct: 2151 tttagaactagagct 2165

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,012,131,461
Number of extensions: 120658212
Number of successful extensions: 9944634
Number of sequences better than 10.0: 75
Length of query: 2132
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 2108
Effective length of database: 97,308,875,965
Effective search space: 205127110534220
Effective search space used: 205127110534220
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7. 1
Homology vs Protein
Query= Contig-U11906-1 (Contig-U11906-1Q) /CSM_Contig/Contig-U11906-1Q.Seq.d
(2132 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AY392429_1(AY392429|pid:none) Dictyostelium discoideum peroxinec... 1096 0.0
CP000806_4755(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 278 6e-73
AF035380_1(AF035380|pid:none) Strongylocentrotus purpuratus ovop... 247 1e-63
AY605095_1(AY605095|pid:none) Lytechinus variegatus thyroid pero... 242 3e-62
AF200348_1(AF200348|pid:none) Homo sapiens melanoma-associated a... 242 3e-62
(Q92626) RecName: Full=Peroxidasin homolog; EC=1.11.1.7... 242 3e-62
(A4IGL7) RecName: Full=Peroxidasin; EC=1.11.1.7; Flags:... 239 2e-61
CP000828_274(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 238 9e-61
AK122223_1(AK122223|pid:none) Mus musculus mRNA for mKIAA0230 pr... 237 1e-60
BC112913_1(BC112913|pid:none) Mus musculus peroxidasin homolog (... 237 1e-60
AY051536_1(AY051536|pid:none) Drosophila melanogaster GH18946 fu... 236 2e-60
AF229855_1(AF229855|pid:none) Caenorhabditis elegans dual oxidas... 230 2e-58
AF035381_1(AF035381|pid:none) Lytechinus variegatus ovoperoxidas... 228 5e-58
(O61213) RecName: Full=Dual oxidase 1; Short=DUOX1; ... 228 9e-58
T32909(T32909)hypothetical protein F56C11.1 - Caenorhabditis ele... 228 9e-58
BT010026_1(BT010026|pid:none) Drosophila melanogaster RE05911 fu... 227 2e-57
AE014297_3770(AE014297|pid:none) Drosophila melanogaster chromos... 227 2e-57
AB022196_1(AB022196|pid:none) Ciona intestinalis mRNA for homolo... 226 3e-57
DQ172834_1(DQ172834|pid:none) Fenneropenaeus chinensis peroxinec... 226 3e-57
FJ362361_2(FJ362361|pid:none) Caenorhabditis brenneri contig JD0... 226 3e-57
AF118391_1(AF118391|pid:none) Anopheles albimanus salivary perox... 225 4e-57
T29809(T29809)hypothetical protein C46A5.4 - Caenorhabditis eleg... 225 6e-57
S46224(S46224) peroxidasin - fruit fly (Drosophila sp.) &U11052... 223 2e-56
JC4397(JC4397;PC4113) peroxinectin precursor - signal crayfish ... 223 2e-56
BT030408_1(BT030408|pid:none) Drosophila melanogaster IP04158 fu... 223 2e-56
T27858(T27858) probable peroxidase (EC 1.11.1.7) ZK430.8 [simila... 222 5e-56
BC082616_1(BC082616|pid:none) Xenopus laevis myeloperoxidase, pe... 220 1e-55
AY069942_1(AY069942|pid:none) Xenopus laevis peroxidase 2' (POX2... 220 1e-55
AF098717_1(AF098717|pid:none) Aedes aegypti peroxidase mRNA, com... 218 7e-55
(Q01603) RecName: Full=Peroxidase; Short=DmPO; ... 217 1e-54
EU934306_1(EU934306|pid:none) TSA: Anopheles darlingi AD-573 sal... 216 2e-54
FN357295_46(FN357295|pid:none) Schistosoma mansoni genome sequen... 216 3e-54
T29027(T29027)hypothetical protein F53G12.3 - Caenorhabditis ele... 216 3e-54
BC056287_1(BC056287|pid:none) Danio rerio myeloid-specific perox... 215 6e-54
AF027970_1(AF027970|pid:none) Ovis aries airway lactoperoxidase ... 214 8e-54
AF378824_1(AF378824|pid:none) Danio rerio myeloid-specific perox... 214 1e-53
AF349034_1(AF349034|pid:none) Danio rerio myeloperoxidase mRNA, ... 214 1e-53
BC068379_1(BC068379|pid:none) Danio rerio myeloid-specific perox... 214 1e-53
AF498045_1(AF498045|pid:none) Mesocricetus auratus lactoperoxida... 213 2e-53
(A8WQH2) RecName: Full=Peroxidasin homolog; EC=1.11.1.7... 213 2e-53
(A1KZ92) RecName: Full=Peroxidasin-like protein; EC=1.1... 213 3e-53
(P09933) RecName: Full=Thyroid peroxidase; Short=TPO; ... 212 4e-53
(P80025) RecName: Full=Lactoperoxidase; Short=LPO; ... 212 5e-53
C28894(C28894)myeloperoxidase (EC 1.11.1.7), splice form H14 - h... 212 5e-53
A08802_1(A08802|pid:none) H.sapiens gene for myeloperoxidase. &... 212 5e-53
BC170068_1(BC170068|pid:none) Xenopus laevis polysomal ribonucle... 211 1e-52
(Q1ENI8) RecName: Full=Peroxidasin homolog; EC=1.11.1.7... 210 1e-52
T32186(T32186)hypothetical protein ZK994.3 - Caenorhabditis eleg... 210 1e-52
AL604022_10(AL604022|pid:none) Mouse DNA sequence from clone RP2... 210 2e-52
AK220229_1(AK220229|pid:none) Mus musculus mRNA for mKIAA4033 pr... 210 2e-52
AY500847_1(AY500847|pid:none) Mus musculus myeloperoxidase precu... 210 2e-52
BC149472_1(BC149472|pid:none) Bos taurus myeloperoxidase, mRNA (... 209 4e-52
EU491019_1(EU491019|pid:none) Felis catus myeloperoxidase mRNA, ... 206 2e-51
U20864_7(U20864|pid:none) Caenorhabditis elegans cosmid F32A5, c... 204 8e-51
U20864_6(U20864|pid:none) Caenorhabditis elegans cosmid F32A5, c... 204 8e-51
BT072012_1(BT072012|pid:none) Salmo salar clone ssal-rgf-507-186... 204 1e-50
AB022197_1(AB022197|pid:none) Halocynthia roretzi mRNA for homol... 204 1e-50
B28894(B28894)myeloperoxidase (EC 1.11.1.7), splice form H17 - h... 203 2e-50
(P11678) RecName: Full=Eosinophil peroxidase; Short=EPO... 202 3e-50
(P35419) RecName: Full=Thyroid peroxidase; Short=TPO; ... 202 3e-50
F88311(F88311) protein T06D8.10 [imported] - Caenorhabditis eleg... 202 4e-50
AK303903_1(AK303903|pid:none) Homo sapiens cDNA FLJ60391 complet... 202 4e-50
L77979_1(L77979|pid:none) Mus musculus (clone pBM.EPO-8/pBM.EPO-... 202 5e-50
(P14650) RecName: Full=Thyroid peroxidase; Short=TPO; ... 202 5e-50
J02969_1(J02969|pid:none) Human thyroid peroxidase mRNA, clone p... 201 7e-50
T16232(T16232)hypothetical protein F32A5.2 - Caenorhabditis eleg... 201 9e-50
(Q8TCI9) RecName: Full=Thyroid peroxidase; Short=TPO; ... 201 1e-49
CU407108_2(CU407108|pid:none) Mouse DNA sequence from clone CH29... 201 1e-49
AC105450_1(AC105450|pid:none) Homo sapiens BAC clone RP11-112B11... 201 1e-49
BC095448_1(BC095448|pid:none) Homo sapiens thyroid peroxidase, m... 201 1e-49
DQ011222_1(DQ011222|pid:none) Homo sapiens thyroid peroxidase (T... 200 2e-49
M17755_1(M17755|pid:none) Homo sapiens thyroid peroxidase (TPO) ... 199 3e-49
Y00406_1(Y00406|pid:none) Human mRNA for thyroperoxidase. 199 4e-49
L01771_1(L01771|pid:none) Euprymna scolopes clone pLO7 peroxidas... 197 1e-48
AE014134_3034(AE014134|pid:none) Drosophila melanogaster chromos... 197 1e-48
AF025463_7(AF025463|pid:none) Caenorhabditis elegans cosmid K10B... 197 2e-48
AL604022_12(AL604022|pid:none) Mouse DNA sequence from clone RP2... 194 1e-47
AY605096_1(AY605096|pid:none) Aplysia californica thyroid peroxi... 192 3e-47
T22448(T22448) probable peroxidase (EC 1.11.1.7) F49E12.1 [simil... 191 1e-46
AF364820_1(AF364820|pid:none) Xenopus laevis peroxidase 2 (POX2)... 190 2e-46
(Q8HYB7) RecName: Full=Thyroid peroxidase; Short=TPO; ... 188 6e-46
X14346_1(X14346|pid:none) Human mRNA for eosinophil peroxidase. 187 2e-45
AM167549_1(AM167549|pid:none) Gallus gallus partial mRNA for thy... 184 1e-44
(Q7QH73) RecName: Full=Chorion peroxidase; EC=1.11.1.7;... 181 7e-44
AK132416_1(AK132416|pid:none) Mus musculus 0 day neonate skin cD... 177 1e-42
DQ082753_1(DQ082753|pid:none) Meloidogyne incognita dual oxidase... 171 1e-40
(P82600) RecName: Full=Chorion peroxidase; EC=1.11.1.7;... 171 1e-40
AY547316_1(AY547316|pid:none) Aedes aegypti chorion peroxidase m... 169 5e-40
AB255050_1(AB255050|pid:none) Danio rerio duox1 mRNA for Dual ox... 167 2e-39
BT044462_1(BT044462|pid:none) Drosophila melanogaster IP19154 fu... 167 2e-39
(Q9ES45) RecName: Full=Dual oxidase 2; EC=1.6.3.1; ... 162 6e-38
(Q8HZK2) RecName: Full=Dual oxidase 2; EC=1.6.3.1; ... 159 4e-37
M58151_1(M58151|pid:none) Human lactoperoxidase (LPO) mRNA, 3' e... 157 1e-36
(Q9NRD9) RecName: Full=Dual oxidase 1; EC=1.6.3.1; ... 157 2e-36
BC114938_1(BC114938|pid:none) Homo sapiens dual oxidase 1, mRNA ... 157 2e-36
(Q8HZK3) RecName: Full=Dual oxidase 1; EC=1.6.3.1; ... 157 2e-36
AK290372_1(AK290372|pid:none) Homo sapiens cDNA FLJ76088 complet... 157 2e-36
AF213465_1(AF213465|pid:none) Homo sapiens dual oxidase mRNA, co... 157 2e-36
AF238306_1(AF238306|pid:none) Drosophila melanogaster peroxinect... 150 2e-34
(Q8CIY2) RecName: Full=Dual oxidase 1; EC=1.6.3.1; ... 150 2e-34
AF230498_1(AF230498|pid:none) Canis familiaris NADPH thyroid oxi... 140 2e-31
CP000283_1557(CP000283|pid:none) Rhodopseudomonas palustris BisB... 135 6e-30
CP001298_1859(CP001298|pid:none) Methylobacterium chloromethanic... 125 8e-27
AY752910_1(AY752910|pid:none) Anopheles gambiae peroxidase 15 mR... 124 1e-26
CP000908_1632(CP000908|pid:none) Methylobacterium extorquens PA1... 124 2e-26
AB281615_1(AB281615|pid:none) Coturnix japonica TPO mRNA for thy... 117 2e-24
EF112175_1(EF112175|pid:none) Scophthalmus maximus myeloperoxida... 111 9e-23
AF378826_1(AF378826|pid:none) Danio rerio myeloid-specific perox... 105 9e-21
AK162992_1(AK162992|pid:none) Mus musculus 0 day neonate thymus ... 104 1e-20
CP001013_2288(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 103 3e-20
CP000454_1236(CP000454|pid:none) Arthrobacter sp. FB24, complete... 102 6e-20
AF027971_1(AF027971|pid:none) Homo sapiens airway lactoperoxidas... 96 5e-18
AF378825_1(AF378825|pid:none) Danio rerio myeloid-specific perox... 96 7e-18
BC077809_1(BC077809|pid:none) Xenopus laevis prostaglandin-endop... 96 7e-18
AY028585_1(AY028585|pid:none) Danio rerio prostaglandin G/H synt... 95 1e-17
CP000113_5083(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 95 1e-17
BC063232_1(BC063232|pid:none) Danio rerio prostaglandin-endopero... 95 1e-17
CP000103_613(CP000103|pid:none) Nitrosospira multiformis ATCC 25... 94 2e-17
AL954747_1241(AL954747|pid:none) Nitrosomonas europaea ATCC 1971... 94 3e-17
BC095912_1(BC095912|pid:none) Xenopus tropicalis prostaglandin-e... 92 6e-17
EU703785_1(EU703785|pid:none) Myxine glutinosa cyclooxygenase-2 ... 92 6e-17
AK134163_1(AK134163|pid:none) Mus musculus adult male thymus cDN... 92 1e-16
(P22437) RecName: Full=Prostaglandin G/H synthase 1; EC... 92 1e-16
AY004223_1(AY004223|pid:none) Plexaura homomalla cyclooxygenase ... 91 2e-16
FJ952157_1(FJ952157|pid:none) Oplegnathus fasciatus cyclooxygena... 91 2e-16
CP000828_2481(CP000828|pid:none) Acaryochloris marina MBIC11017,... 91 2e-16
AY004222_1(AY004222|pid:none) Gersemia fruticosa cyclooxygenase ... 89 8e-16
AF420317_1(AF420317|pid:none) Squalus acanthias cyclooxygenase m... 89 8e-16
CP001037_4973(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 88 1e-15
S39782(S39782)cyclooxygenase 1 - rat 88 1e-15
AJ238307_1(AJ238307|pid:none) Oncorhynchus mykiss mRNA for cyclo... 88 1e-15
CU458896_3880(CU458896|pid:none) Mycobacterium abscessus chromos... 87 2e-15
EU677754_1(EU677754|pid:none) Xenopus laevis thyroid peroxidase ... 87 2e-15
AF158373_1(AF158373|pid:none) Salvelinus fontinalis prostaglandi... 87 2e-15
AY532639_1(AY532639|pid:none) Fundulus heteroclitus cyclooxygena... 87 3e-15
AB480295_1(AB480295|pid:none) Carassius auratus langsdorfii Mpx ... 86 5e-15
AK304403_1(AK304403|pid:none) Homo sapiens cDNA FLJ53280 complet... 86 5e-15
M31822_1(M31822|pid:none) Homo sapiens prostaglandin-endoperoxid... 86 7e-15
CP000578_623(CP000578|pid:none) Rhodobacter sphaeroides ATCC 170... 86 7e-15
S67721_1(S67721|pid:none) Rattus norvegicus cyclooxygenase isofo... 86 7e-15
EU703781_1(EU703781|pid:none) Fundulus heteroclitus cyclooxygena... 85 1e-14
BC116575_1(BC116575|pid:none) Danio rerio prostaglandin-endopero... 84 3e-14
(P27607) RecName: Full=Prostaglandin G/H synthase 2; EC... 82 6e-14
AY028584_1(AY028584|pid:none) Danio rerio prostaglandin G/H synt... 82 8e-14
(P35354) RecName: Full=Prostaglandin G/H synthase 2; EC... 82 8e-14
BC139568_1(BC139568|pid:none) Danio rerio prostaglandin-endopero... 82 8e-14
AY752896_1(AY752896|pid:none) Anopheles gambiae peroxidase 4A mR... 81 2e-13
AF181973_1(AF181973|pid:none) Sus scrofa NADH/NADPH thyroid oxid... 80 2e-13
BA000030_1780(BA000030|pid:none) Streptomyces avermitilis MA-468... 80 3e-13
AJ007630_1(AJ007630|pid:none) Nicotiana tabacum mRNA for oxygena... 80 3e-13
PDBN(1CQE)A MOL_ID: 1;MOL_ID: 1; MOLECULE: PROSTAGLANDIN H2 SYNT... 79 5e-13
(P05979) RecName: Full=Prostaglandin G/H synthase 1; EC... 79 5e-13
EU703784_1(EU703784|pid:none) Myoxocephalus octodecemspinosus cy... 79 5e-13
S00561(S00561) prostaglandin-endoperoxide synthase (EC 1.14.99.1... 79 5e-13
BT045745_1(BT045745|pid:none) Salmo salar clone ssal-rgf-530-117... 79 7e-13
CP001349_6215(CP001349|pid:none) Methylobacterium nodulans ORS 2... 79 9e-13
CP000806_4303(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 78 1e-12
CP000390_786(CP000390|pid:none) Mesorhizobium sp. BNC1, complete... 78 1e-12
AF233596_1(AF233596|pid:none) Rattus norvegicus cyclooxygenase-2... 78 1e-12
CQ783393_1(CQ783393|pid:none) Sequence 3533 from Patent EP1396543. 78 1e-12
AF158374_1(AF158374|pid:none) Salvelinus fontinalis prostaglandi... 78 1e-12
CP001341_2833(CP001341|pid:none) Arthrobacter chlorophenolicus A... 78 1e-12
L20085_1(L20085|pid:none) Rat cyclooxygenase-2 mRNA, complete cds. 77 2e-12
AB177842_1(AB177842|pid:none) Meriones unguiculatus cox-2 mRNA f... 77 3e-12
AJ299018_1(AJ299018|pid:none) Oncorhynchus mykiss mRNA for cyclo... 77 3e-12
AY044905_1(AY044905|pid:none) Canis familiaris prostaglandin G/H... 77 3e-12
AF207824_1(AF207824|pid:none) Sus scrofa cyclooxygenase-2 (COX-2... 76 4e-12
AJ784963_1(AJ784963|pid:none) Pisum sativum mRNA for alpha-dioxy... 75 1e-11
M64291_1(M64291|pid:none) Mus musculus prostaglandin synthase mR... 74 2e-11
(Q05769) RecName: Full=Prostaglandin G/H synthase 2; EC... 74 2e-11
(P79208) RecName: Full=Prostaglandin G/H synthase 2; EC... 73 4e-11
EU703786_1(EU703786|pid:none) Petromyzon marinus cyclooxygenase ... 73 5e-11
AM464874_1(AM464874|pid:none) Vitis vinifera contig VV78X120369.... 73 5e-11
AY606268_1(AY606268|pid:none) Scylla serrata peroxinectin mRNA, ... 73 5e-11
CP000943_1534(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 72 1e-10
CP000480_6119(CP000480|pid:none) Mycobacterium smegmatis str. MC... 71 1e-10
(P70682) RecName: Full=Prostaglandin G/H synthase 2; EC... 71 2e-10
(O62698) RecName: Full=Prostaglandin G/H synthase 2; EC... 70 2e-10
EF028069_1(EF028069|pid:none) Bubalus bubalis cyclo-oxygenase 2 ... 70 2e-10
AY606270_1(AY606270|pid:none) Macrobrachium rosenbergii peroxine... 70 3e-10
AK128591_1(AK128591|pid:none) Homo sapiens cDNA FLJ46750 fis, cl... 69 9e-10
S36219_1(S36219|pid:none) prostaglandin G/H synthase {alternativ... 68 1e-09
AL162424_14(AL162424|pid:none) Human DNA sequence from clone RP1... 68 1e-09
AK295221_1(AK295221|pid:none) Homo sapiens cDNA FLJ61263 complet... 68 1e-09
CP001298_90(CP001298|pid:none) Methylobacterium chloromethanicum... 67 3e-09
AY151286_1(AY151286|pid:none) Homo sapiens cyclooxygenase 2b mRN... 66 6e-09
DQ246452_1(DQ246452|pid:none) Equus caballus prostaglandin-endop... 65 1e-08
AM420293_4921(AM420293|pid:none) Saccharopolyspora erythraea NRR... 64 2e-08
EU703788_1(EU703788|pid:none) Branchiostoma lanceolatum cyclooxy... 64 2e-08
X04645_1(X04645|pid:none) Porcine mRNA for thyroid peroxidase C-... 64 3e-08
AB044783_1(AB044783|pid:none) Meriones unguiculatus cox-1 mRNA f... 64 3e-08
AY186194_10(AY186194|pid:none) Rhesus cytomegalovirus strain 68-... 63 5e-08
AF229813_1(AF229813|pid:none) Oryza sativa fatty acid alpha-oxid... 63 5e-08
AC139526_1(AC139526|pid:none) Medicago truncatula clone mth2-9b2... 62 8e-08
AY752895_1(AY752895|pid:none) Anopheles gambiae peroxidase 3 mRN... 62 8e-08
CP000511_3050(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 60 2e-07
AF229926_1(AF229926|pid:none) Nicotiana attenuata pathogen-induc... 60 2e-07
AY606269_1(AY606269|pid:none) Thalamita crenata peroxinectin mRN... 59 5e-07
S70648(S70648) gene feebly protein - tomato &U35643_1(U35643|pi... 59 9e-07
AM450027_2(AM450027|pid:none) Vitis vinifera contig VV78X059426.... 57 2e-06
AF533529_1(AF533529|pid:none) Homo sapiens thyroid peroxidase is... 55 1e-05
FJ538183_1(FJ538183|pid:none) Aspergillus fumigatus linoleate 10... 54 2e-05
AY752901_1(AY752901|pid:none) Anopheles gambiae peroxidase 7 mRN... 50 3e-04
AM270019_20(AM270019|pid:none) Aspergillus niger contig An02c024... 50 3e-04
AF326958_1(AF326958|pid:none) Danio rerio putative peroxidase mR... 49 7e-04
BT015247_1(BT015247|pid:none) Drosophila melanogaster LP19917 fu... 48 0.002
S65893(S65893)ovoperoxidase - sea urchin (Hemicentrotus pulcherr... 47 0.003
BA000045_3599(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 47 0.003
AP007175_504(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 47 0.004
AB209010_1(AB209010|pid:none) Homo sapiens mRNA for dual oxidase... 45 0.008
D14466_1(D14466|pid:none) Homo sapiens mpo gene for myeloperoxid... 45 0.014
AF535139_1(AF535139|pid:none) Canis familiaris cyclooxygenase-1 ... 45 0.014
A95292(A95292) hypothetical protein SMa0462 [imported] - Sinorhi... 44 0.018
CP000031_727(CP000031|pid:none) Ruegeria pomeroyi DSS-3, complet... 44 0.031
AM270079_32(AM270079|pid:none) Aspergillus niger contig An04c018... 44 0.031
AP007175_565(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 42 0.069
CU633457_212(CU633457|pid:none) Podospora anserina genomic DNA c... 42 0.090
AP007155_672(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 41 0.20
CP000463_4296(CP000463|pid:none) Rhodopseudomonas palustris BisA... 39 0.59
AY372822_1(AY372822|pid:none) Magnaporthe grisea linoleate diol ... 39 1.00
CP001348_1481(CP001348|pid:none) Clostridium cellulolyticum H10,... 39 1.00
CP001331_393(CP001331|pid:none) Micromonas sp. RCC299 chromosome... 39 1.00
AK037033_1(AK037033|pid:none) Mus musculus adult female vagina c... 38 1.3
EF147254_1(EF147254|pid:none) Populus trichocarpa clone WS01229_... 38 1.3
CP000285_1048(CP000285|pid:none) Chromohalobacter salexigens DSM... 38 1.3
AC146308_2(AC146308|pid:none) Medicago truncatula clone mth2-10a... 37 2.2
AY502073_1(AY502073|pid:none) Emericella nidulans fatty acid oxy... 29 2.8
CP000949_3994(CP000949|pid:none) Pseudomonas putida W619, comple... 37 2.9
CP000926_4199(CP000926|pid:none) Pseudomonas putida GB-1, comple... 37 2.9
CP000712_1204(CP000712|pid:none) Pseudomonas putida F1, complete... 37 2.9
CP001154_1469(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 37 2.9
AM236080_1866(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 37 2.9
AY214161_3(AY214161|pid:none) Pseudomonas putida strain 06909 se... 37 2.9
CP000094_1185(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 37 3.8
AY940146_1(AY940146|pid:none) Emericella nidulans fatty acid oxy... 37 3.8
CP000076_1221(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 37 3.8
BA000040_7227(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 37 3.8
NRL(1MYPA) myeloperoxidase (EC 1.11.1.7), chain A - dog &NRL(1M... 36 6.5
(Q9RPT0) RecName: Full=UPF0066 protein rcsF; &AE004091_3388(AE0... 35 8.5
AY658142_1(AY658142|pid:none) Synthetic construct Peudomonas aer... 35 8.5
AF124979_1(AF124979|pid:none) Gaeumannomyces graminis var. avena... 35 8.5
CP000438_1606(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 35 8.5

>AY392429_1(AY392429|pid:none) Dictyostelium discoideum peroxinectin
gene, complete cds.
Length = 531

Score = 1096 bits (2835), Expect = 0.0
Identities = 530/530 (100%), Positives = 530/530 (100%)
Frame = +3

Query: 426 MRLNLISFFIIFTILVSISNSQEFRSYTGEGNNKQNPKQGSIFTPFIRLANPIKFNKNGF 605
MRLNLISFFIIFTILVSISNSQEFRSYTGEGNNKQNPKQGSIFTPFIRLANPIKFNKNGF
Sbjct: 1 MRLNLISFFIIFTILVSISNSQEFRSYTGEGNNKQNPKQGSIFTPFIRLANPIKFNKNGF 60

Query: 606 PNITNQPSRAISNIIFDQQTHIGSKEHLTDMFNMWGQFLIHNMALSKPEPNSWPIKVPKC 785
PNITNQPSRAISNIIFDQQTHIGSKEHLTDMFNMWGQFLIHNMALSKPEPNSWPIKVPKC
Sbjct: 61 PNITNQPSRAISNIIFDQQTHIGSKEHLTDMFNMWGQFLIHNMALSKPEPNSWPIKVPKC 120

Query: 786 DQYFDPACIGNKTMNYFRTRATEVPCDVGKTVVDEDGKCYEQINSLGSYIDGNVLYGNSE 965
DQYFDPACIGNKTMNYFRTRATEVPCDVGKTVVDEDGKCYEQINSLGSYIDGNVLYGNSE
Sbjct: 121 DQYFDPACIGNKTMNYFRTRATEVPCDVGKTVVDEDGKCYEQINSLGSYIDGNVLYGNSE 180

Query: 966 EICKNLRSLSGGEMKMTVTDVGDLPPKNVPGVPMDNDANLFPIDQLYSVGERRGNENPGL 1145
EICKNLRSLSGGEMKMTVTDVGDLPPKNVPGVPMDNDANLFPIDQLYSVGERRGNENPGL
Sbjct: 181 EICKNLRSLSGGEMKMTVTDVGDLPPKNVPGVPMDNDANLFPIDQLYSVGERRGNENPGL 240

Query: 1146 LSIHTLLLRDHNRLARKFARLHPEWDDERVFQQSRSCIIEQIQKITYDEYLPTTLGSFPS 1325
LSIHTLLLRDHNRLARKFARLHPEWDDERVFQQSRSCIIEQIQKITYDEYLPTTLGSFPS
Sbjct: 241 LSIHTLLLRDHNRLARKFARLHPEWDDERVFQQSRSCIIEQIQKITYDEYLPTTLGSFPS 300

Query: 1326 YTGYDANVNAQVSNEFTTTAFRFGHSEVGPFMEYYSENGTRLQPLPIKFSYFNPHALNRG 1505
YTGYDANVNAQVSNEFTTTAFRFGHSEVGPFMEYYSENGTRLQPLPIKFSYFNPHALNRG
Sbjct: 301 YTGYDANVNAQVSNEFTTTAFRFGHSEVGPFMEYYSENGTRLQPLPIKFSYFNPHALNRG 360

Query: 1506 VEPLIRGLIINEEENIDIYMISDLRNFLFGKPGQGGLDLASRNLQRNRDHGIPPYNSLRR 1685
VEPLIRGLIINEEENIDIYMISDLRNFLFGKPGQGGLDLASRNLQRNRDHGIPPYNSLRR
Sbjct: 361 VEPLIRGLIINEEENIDIYMISDLRNFLFGKPGQGGLDLASRNLQRNRDHGIPPYNSLRR 420

Query: 1686 QLGLRPVQTWSDITSDPQIQNRLKNAYKSVDDIDSYVGGLAEDHMEGSCVGQTFYLIIYE 1865
QLGLRPVQTWSDITSDPQIQNRLKNAYKSVDDIDSYVGGLAEDHMEGSCVGQTFYLIIYE
Sbjct: 421 QLGLRPVQTWSDITSDPQIQNRLKNAYKSVDDIDSYVGGLAEDHMEGSCVGQTFYLIIYE 480

Query: 1866 QFFRTRAGDRFWYETPEMRMVNRECETTTFAEVIKRTTSNIGYVQPNVFR 2015
QFFRTRAGDRFWYETPEMRMVNRECETTTFAEVIKRTTSNIGYVQPNVFR
Sbjct: 481 QFFRTRAGDRFWYETPEMRMVNRECETTTFAEVIKRTTSNIGYVQPNVFR 530

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,758,322,199
Number of extensions: 56211732
Number of successful extensions: 130875
Number of sequences better than 10.0: 242
Number of HSP's gapped: 130169
Number of HSP's successfully gapped: 306
Length of query: 710
Length of database: 1,051,180,864
Length adjustment: 136
Effective length of query: 574
Effective length of database: 611,008,840
Effective search space: 350719074160
Effective search space used: 350719074160
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.94 gvh: 0.25 alm: 0.43 top: 0.40 tms: 0.00 mit: 0.36 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: cytoplasmic
32.0 %: nuclear
8.0 %: mitochondrial
4.0 %: plasma membrane
4.0 %: peroxisomal
4.0 %: endoplasmic reticulum

>> prediction for Contig-U11906-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 2
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0