| Contig-U11862-1 |
| Contig ID |
Contig-U11862-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1871 |
| Chromosome number (1..6, M) |
6 |
| Chromosome length |
3595308 |
| Start point |
414915 |
| End point |
416767 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
7 |
| Number of EST |
10 |
| Link to clone list |
U11862 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.27 |
| Homology vs DNA |
Query= Contig-U11862-1 (Contig-U11862-1Q) /CSM_Contig/Contig-U11862-1Q.Seq.d
(1881 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ341642) Dictyostelium discoideum cDNA clone:dda7f14, 3' e... 654 0.0 2
(BJ324699) Dictyostelium discoideum cDNA clone:dda7f14, 5' e... 609 0.0 3
(BJ328918) Dictyostelium discoideum cDNA clone:dda30h02, 5' ... 825 0.0 1
(BJ346173) Dictyostelium discoideum cDNA clone:dda30h02, 3' ... 482 0.0 2
(BJ421569) Dictyostelium discoideum cDNA clone:ddv43i05, 5' ... 763 0.0 1
(BJ419969) Dictyostelium discoideum cDNA clone:ddv37e22, 5' ... 763 0.0 1
(BJ364697) Dictyostelium discoideum cDNA clone:ddc32j17, 5' ... 642 e-179 1
(BJ368759) Dictyostelium discoideum cDNA clone:ddc48a05, 5' ... 492 e-134 1
(BJ423929) Dictyostelium discoideum cDNA clone:ddv50j19, 5' ... 317 1e-91 2
(BJ384026) Dictyostelium discoideum cDNA clone:ddc48a05, 3' ... 80 5e-33 3
(BJ442752) Dictyostelium discoideum cDNA clone:ddv50j19, 3' ... 64 9e-12 2
(BJ432213) Dictyostelium discoideum cDNA clone:ddv18d06, 3' ... 44 0.017 2
(BJ434129) Dictyostelium discoideum cDNA clone:ddv23p24, 3' ... 44 0.017 2
(BJ433909) Dictyostelium discoideum cDNA clone:ddv23f10, 3' ... 44 0.017 2
(AU039871) Dictyostelium discoideum slug cDNA, clone SLG627. 44 0.017 2
(AU034425) Dictyostelium discoideum slug cDNA, clone SLC857. 44 0.017 2
(BJ433911) Dictyostelium discoideum cDNA clone:ddv23f12, 3' ... 44 0.017 2
(BJ435338) Dictyostelium discoideum cDNA clone:ddv26g21, 3' ... 44 0.017 2
(AU263043) Dictyostelium discoideum vegetative cDNA clone:VS... 44 0.017 2
(C94241) Dictyostelium discoideum slug cDNA, clone SSK579. 44 0.017 2
(AU074958) Dictyostelium discoideum slug cDNA, clone SSM582. 44 0.017 2
(DY290962) IC0AAA76DE03RM1 CitNFL Citrus clementina cDNA 5',... 50 0.31 1
(DY287024) IC0AAA66CG07RM1 CitNFL Citrus clementina cDNA 5',... 50 0.31 1
(DY281530) IC0AAA54AG09RM1 CitNFL Citrus clementina cDNA 5',... 50 0.31 1
(DY266270) IC0AAA19CG09RM1 CitNFL Citrus clementina cDNA 5',... 50 0.31 1
(CX711694) gmrtDrNS01_37-D_M13R_B01_013.s0 Water stressed gm... 50 0.31 1
(CF836965) UCRCS03_03O03_f Washington Navel Orange Shoot Mer... 50 0.31 1
(BI944036) sa73a01.y1 Gm-c1004 Glycine max cDNA clone GENOME... 50 0.31 1
(FG934000) UCRVU09_CCNT12838_g1 Cowpea UCR 707 Mixed Tissue ... 50 0.31 1
(FG857447) UCRVU05_CCNN21260_g1 Cowpea IT84S-2049 Mixed Tiss... 50 0.31 1
(FG854275) UCRVU05_CCNN19073_g1 Cowpea IT84S-2049 Mixed Tiss... 50 0.31 1
(FG837770) UCRVU05_CCNN2427_g1 Cowpea IT84S-2049 Mixed Tissu... 50 0.31 1
(EY171315) CBTI3136.g1_O15.ab1:P Triphysaria pusilla root ti... 40 0.35 2
(EY152353) CBTN4332.g1_H03.ab1:P Triphysaria pusilla root ti... 40 0.54 2
(EY182309) CBTI8564.g1_H05.ab1:P Triphysaria pusilla root ti... 40 0.56 2
(CL118162) ISB1-70C15_Sp6.1 ISB1 Xenopus (Silurana) tropical... 48 0.69 2
(BJ432999) Dictyostelium discoideum cDNA clone:ddv20p10, 3' ... 38 0.87 2
(BJ347513) Dictyostelium discoideum cDNA clone:dda27g09, 3' ... 38 0.87 2
(EX510005) RR_EG1059A51a01.esd.z EG1 Schistosoma mansoni cDN... 34 0.90 2
(BG353179) ps23d02.y1 Trichinella spiralis ML CMVsport jasme... 44 1.1 2
(CL065117) CH216-103N1_RM1.1 CH216 Xenopus (Silurana) tropic... 48 1.2 1
(BJ433336) Dictyostelium discoideum cDNA clone:ddv21a17, 3' ... 36 3.2 2
(EL564148) Physarum05657 Physarum polycephalum starvation st... 42 4.7 2
(AC117663) Mus musculus chromosome 5, clone RP23-354E8, comp... 46 4.8 1
(AC117614) Mus musculus chromosome 5, clone RP23-110C17, com... 46 4.8 1
(AF135418) Homo sapiens 4q13 genomic sequence. 46 4.8 1
(AC104122) Homo sapiens chromosome 5 clone RP11-410P18, comp... 46 4.8 1
(AC093829) Homo sapiens BAC clone RP11-401E5 from 4, complet... 46 4.8 1
(AC027323) Homo sapiens chromosome 5 clone CTD-2034A10, comp... 46 4.8 1
(AC107424) Homo sapiens chromosome 3 clone RP11-374K15, WORK... 46 4.8 1
(AC093266) Homo sapiens chromosome 5 clone RP11-27O20, WORKI... 46 4.8 1
(AC012582) Homo sapiens clone RP11-3C24, *** SEQUENCING IN P... 46 4.8 1
(AQ675292) HS_2145_A1_C09_T7C CIT Approved Human Genomic Spe... 46 4.8 1
(AQ588729) CITBI-E1-2643N15.TR CITBI-E1 Homo sapiens genomic... 46 4.8 1
(ER514052) 1093015481796 Global-Ocean-Sampling_GS-35-01-01-1... 46 4.8 1
(EJ386296) 1092963816886 Global-Ocean-Sampling_GS-28-01-01-1... 46 4.8 1
(EJ007369) 1091139296359 Global-Ocean-Sampling_GS-26-01-01-1... 46 4.8 1
(B80306) CIT-HSP-2045E17.TF CIT-HSP Homo sapiens genomic clo... 46 4.8 1
(DR968408) ZM_BFb0089L08.f ZM_BFb Zea mays cDNA 3', mRNA seq... 46 4.8 1
(FK883174) EST_crog_evp_914058 crog_evp Caligus rogercressey... 46 4.8 1
(EJ082363) 1095460054351 Global-Ocean-Sampling_GS-26-01-01-1... 34 5.8 3
(EJ404470) 1093012079901 Global-Ocean-Sampling_GS-28-01-01-1... 36 7.8 3
(DQ897681) Pelargonium x hortorum chloroplast, complete genome. 32 8.6 2
(DQ864733) Citrus sinensis chloroplast, complete genome. 32 8.8 2
(AP009370) Barbarea verna chloroplast DNA, complete sequence. 32 8.8 2
>(BJ341642) Dictyostelium discoideum cDNA clone:dda7f14, 3' end,
single read.
Length = 813
Score = 654 bits (330), Expect(2) = 0.0
Identities = 330/330 (100%)
Strand = Plus / Minus
Query: 1381 catgaatcaaggtggtccaatgggtaataaaaagaatcaaagtgttggtccacaaggttc 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 catgaatcaaggtggtccaatgggtaataaaaagaatcaaagtgttggtccacaaggttc 272
Query: 1441 aaatctattcgtttacaatataccaaattacttctctgataatgatttacttggactatt 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aaatctattcgtttacaatataccaaattacttctctgataatgatttacttggactatt 212
Query: 1501 ccaacaatatggtattgttgtaagtgctaaagtttatgttgataaaaatactggcgttag 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ccaacaatatggtattgttgtaagtgctaaagtttatgttgataaaaatactggcgttag 152
Query: 1561 taaaggttttggttttgtatcatatgataatccagcttctgcaaatttagctatttctaa 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 taaaggttttggttttgtatcatatgataatccagcttctgcaaatttagctatttctaa 92
Query: 1621 tttacatggtcaaatgatggcaggtaaaaaattgaaggtttcactcaagcaaacttcggt 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 tttacatggtcaaatgatggcaggtaaaaaattgaaggtttcactcaagcaaacttcggt 32
Query: 1681 caaggttcccaaccatattaaaacaaaaaa 1710
||||||||||||||||||||||||||||||
Sbjct: 31 caaggttcccaaccatattaaaacaaaaaa 2
Score = 323 bits (163), Expect(2) = 0.0
Identities = 167/169 (98%)
Strand = Plus / Minus
Query: 899 atcaattcccctccaaaaatgaatcaacaaccattcattgttaatccatattttggtcaa 958
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 813 atcaattcccctccaaaaatgaatcancanccattcattgttaatccatattttggtcaa 754
Query: 959 atgccaaattttaattttattccaagtattgattcatcaccatcattattaggtacacca 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 atgccaaattttaattttattccaagtattgattcatcaccatcattattaggtacacca 694
Query: 1019 ccaattattggtgatggtatttatgatatatattcaaattcacaatttg 1067
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 ccaattattggtgatggtatttatgatatatattcaaattcacaatttg 645
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,322,252,368
Number of extensions: 80834992
Number of successful extensions: 6982244
Number of sequences better than 10.0: 65
Length of query: 1881
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1857
Effective length of database: 97,308,875,965
Effective search space: 180702582667005
Effective search space used: 180702582667005
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 1 |
| Homology vs Protein |
Query= Contig-U11862-1 (Contig-U11862-1Q) /CSM_Contig/Contig-U11862-1Q.Seq.d
(1881 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC005275_3(AC005275|pid:none) Arabidopsis thaliana BAC F4C21 fro... 173 2e-41
AY065261_1(AY065261|pid:none) Arabidopsis thaliana putative ribo... 173 2e-41
AK316961_1(AK316961|pid:none) Arabidopsis thaliana AT4G03110 mRN... 173 2e-41
AK073796_1(AK073796|pid:none) Oryza sativa Japonica Group cDNA c... 169 3e-40
AP008211_995(AP008211|pid:none) Oryza sativa (japonica cultivar-... 169 3e-40
AK117246_1(AK117246|pid:none) Arabidopsis thaliana At1g03460 mRN... 167 2e-39
AK099501_1(AK099501|pid:none) Oryza sativa Japonica Group cDNA c... 166 4e-39
AC002560_8(AC002560|pid:none) Genomic sequence for Arabidopsis t... 159 3e-37
T00912(T00912)ribonucleoprotein homolog F21B7.26 - Arabidopsis t... 159 3e-37
EU975915_1(EU975915|pid:none) Zea mays clone 505277 RNA binding ... 159 4e-37
BC163416_1(BC163416|pid:none) Danio rerio bruno-like 5, RNA bind... 149 3e-34
AY805329_1(AY805329|pid:none) Pisum sativum FCA gamma (FCA gamma... 147 1e-33
AL929135_1(AL929135|pid:none) Zebrafish DNA sequence from clone ... 146 3e-33
AP008215_54(AP008215|pid:none) Oryza sativa (japonica cultivar-g... 145 7e-33
AP006062_17(AP006062|pid:none) Oryza sativa Japonica Group genom... 145 7e-33
CR760829_1(CR760829|pid:none) Xenopus tropicalis finished cDNA, ... 144 9e-33
(Q91579) RecName: Full=CUG-BP- and ETR-3-like factor 3-A; ... 144 9e-33
U16800_1(U16800|pid:none) Xenopus laevis elav-type ribonucleopro... 144 9e-33
BC154063_1(BC154063|pid:none) Xenopus tropicalis trinucleotide r... 144 9e-33
BT066428_1(BT066428|pid:none) Zea mays full-length cDNA clone ZM... 144 1e-32
AJ237848_1(AJ237848|pid:none) Brassica napus partial fca gene, h... 144 1e-32
AY230357_1(AY230357|pid:none) Triticum aestivum clone 4Sc-H10 FC... 144 1e-32
AY230326_1(AY230326|pid:none) Triticum aestivum clone 3W2c-D9 FC... 144 1e-32
AF414188_1(AF414188|pid:none) Brassica napus FCA gamma gene, com... 144 1e-32
AY230366_1(AY230366|pid:none) Triticum aestivum clone 2Mb-B6 FCA... 143 2e-32
AY230339_1(AY230339|pid:none) Triticum aestivum clone 3W2c-C11 F... 143 2e-32
AY230378_1(AY230378|pid:none) Triticum aestivum clone 2Mb-A5 FCA... 143 2e-32
AY230402_1(AY230402|pid:none) Triticum aestivum clone A1 FCA-D1 ... 143 2e-32
AY230398_1(AY230398|pid:none) Triticum aestivum FCA-A1 (Fca) mRN... 143 2e-32
AY230384_1(AY230384|pid:none) Triticum aestivum clone 1Nb-H5 FCA... 143 2e-32
AY230368_1(AY230368|pid:none) Triticum aestivum clone 2M-H7 FCA ... 143 2e-32
AY230397_1(AY230397|pid:none) Triticum aestivum clone 1Nb-H10 FC... 143 2e-32
AY230367_1(AY230367|pid:none) Triticum aestivum clone 2Mb-H8 FCA... 143 2e-32
(Q08E07) RecName: Full=CUG-BP- and ETR-3-like factor 3; ... 143 2e-32
AY230324_1(AY230324|pid:none) Triticum aestivum clone 3W2c-A3 FC... 143 2e-32
AY165003_1(AY165003|pid:none) Homo sapiens CUG-BP and ETR-3 like... 143 2e-32
AY230349_1(AY230349|pid:none) Triticum aestivum clone 4Sc-D4 FCA... 143 2e-32
BC057553_1(BC057553|pid:none) Mus musculus trinucleotide repeat ... 143 2e-32
(Q5SZQ8) RecName: Full=CUG-BP- and ETR-3-like factor 3; ... 143 2e-32
AL589765_5(AL589765|pid:none) Human DNA sequence from clone RP11... 143 2e-32
AY230334_1(AY230334|pid:none) Triticum aestivum clone 3W2c-A10 F... 143 2e-32
Z82990_1(Z82990|pid:none) A.thaliana mRNA for FCA delta. 142 3e-32
A85181(A85181) FCA delta protein [imported] - Arabidopsis thalia... 142 3e-32
EF520347_1(EF520347|pid:none) Gallus gallus CUG-BP and ETR-3-lik... 142 3e-32
AL161543_28(AL161543|pid:none) Arabidopsis thaliana DNA chromoso... 142 3e-32
U58976_1(U58976|pid:none) Drosophila melanogaster ovarian RNA-bi... 142 4e-32
U73846_1(U73846|pid:none) Drosophila melanogaster testis-specifi... 142 4e-32
AE014134_2269(AE014134|pid:none) Drosophila melanogaster chromos... 142 4e-32
AY230346_1(AY230346|pid:none) Triticum aestivum clone 4Sc-E3 FCA... 142 4e-32
AE014134_2267(AE014134|pid:none) Drosophila melanogaster chromos... 142 4e-32
AY230335_1(AY230335|pid:none) Triticum aestivum clone 3W2-A1 FCA... 142 6e-32
AY230376_1(AY230376|pid:none) Triticum aestivum clone 2Mb-C3e FC... 142 6e-32
AY230372_1(AY230372|pid:none) Triticum aestivum clone 2Mb-E11 FC... 142 6e-32
AY230327_1(AY230327|pid:none) Triticum aestivum clone 3W2c-D3 FC... 142 6e-32
AY230355_1(AY230355|pid:none) Triticum aestivum clone 4Sc-D7 FCA... 141 7e-32
(Q7ZWM3) RecName: Full=CUG-BP- and ETR-3-like factor 3-B; ... 141 7e-32
(Q9IBD1) RecName: Full=CUG-BP- and ETR-3-like factor 3; ... 140 2e-31
AB032725_1(AB032725|pid:none) Danio rerio mRNA for Etr-1, comple... 140 2e-31
BC045711_1(BC045711|pid:none) Homo sapiens bruno-like 4, RNA bin... 140 2e-31
AF248650_1(AF248650|pid:none) Homo sapiens RNA-binding protein B... 140 2e-31
BC143226_1(BC143226|pid:none) Homo sapiens trinucleotide repeat ... 139 3e-31
(Q8CIN6) RecName: Full=CUG-BP- and ETR-3-like factor 3; ... 139 3e-31
(A0JM51) RecName: Full=CUG-BP- and ETR-3-like factor 5; ... 139 4e-31
EU743745_1(EU743745|pid:none) Xenopus laevis RNA binding protein... 139 4e-31
AY230388_1(AY230388|pid:none) Triticum aestivum clone 1Nb-E7 FCA... 139 5e-31
AY230336_1(AY230336|pid:none) Triticum aestivum clone 3W2b-F7 FC... 138 6e-31
(Q6DGV1) RecName: Full=CUG-BP- and ETR-3-like factor 4; ... 138 6e-31
AE014134_2272(AE014134|pid:none) Drosophila melanogaster chromos... 137 1e-30
AE014134_2273(AE014134|pid:none) Drosophila melanogaster chromos... 137 1e-30
AB209067_1(AB209067|pid:none) Homo sapiens mRNA for bruno-like 5... 137 2e-30
(Q8N6W0) RecName: Full=CUG-BP- and ETR-3-like factor 5; ... 137 2e-30
AF329266_1(AF329266|pid:none) Homo sapiens CUG-BP and ETR-3 like... 137 2e-30
BC146142_1(BC146142|pid:none) Bos taurus bruno-like 4, RNA bindi... 136 2e-30
(Q4R535) RecName: Full=CUG-BP- and ETR-3-like factor 4; ... 136 2e-30
AK295009_1(AK295009|pid:none) Homo sapiens cDNA FLJ54925 complet... 136 2e-30
AF515450_1(AF515450|pid:none) Mus musculus bruno-like 4 protein ... 136 2e-30
AY230386_1(AY230386|pid:none) Triticum aestivum clone 1Nb-A5 FCA... 135 4e-30
AM910993_114(AM910993|pid:none) Plasmodium knowlesi strain H chr... 135 5e-30
BC048405_1(BC048405|pid:none) Mus musculus bruno-like 4, RNA bin... 135 7e-30
CR859631_1(CR859631|pid:none) Pongo abelii mRNA; cDNA DKFZp459F0... 135 7e-30
AB209774_1(AB209774|pid:none) Homo sapiens mRNA for bruno-like 4... 134 9e-30
(Q5NVC8) RecName: Full=CUG-BP- and ETR-3-like factor 4; ... 134 9e-30
AK100642_1(AK100642|pid:none) Oryza sativa Japonica Group cDNA c... 134 1e-29
CR926110_1(CR926110|pid:none) Pongo abelii mRNA; cDNA DKFZp459J0... 134 1e-29
DQ021476_1(DQ021476|pid:none) Danio rerio napor protein isoform ... 134 1e-29
AK074596_1(AK074596|pid:none) Homo sapiens cDNA FLJ90115 fis, cl... 134 1e-29
AL935165_2(AL935165|pid:none) Zebrafish DNA sequence from clone ... 134 1e-29
(Q6P0B1) RecName: Full=CUG-BP- and ETR-3-like factor 2; ... 134 1e-29
DQ021474_1(DQ021474|pid:none) Danio rerio napor protein short is... 134 1e-29
AL844509_578(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 134 2e-29
(Q9IBD0) RecName: Full=CUG-BP- and ETR-3-like factor 1; ... 134 2e-29
CR861202_1(CR861202|pid:none) Pongo abelii mRNA; cDNA DKFZp459F0... 134 2e-29
CR860590_1(CR860590|pid:none) Pongo abelii mRNA; cDNA DKFZp459H0... 133 2e-29
AY230323_1(AY230323|pid:none) Triticum aestivum mutant FCA-D1 (F... 133 2e-29
(Q7ZXE2) RecName: Full=CUG-BP- and ETR-3-like factor 2; ... 133 3e-29
AK296004_1(AK296004|pid:none) Homo sapiens cDNA FLJ56494 complet... 133 3e-29
(Q96J87) RecName: Full=CUG-BP- and ETR-3-like factor 6; ... 133 3e-29
BC030835_1(BC030835|pid:none) Homo sapiens bruno-like 6, RNA bin... 133 3e-29
AL845492_3(AL845492|pid:none) Mouse DNA sequence from clone RP23... 132 3e-29
AK151818_1(AK151818|pid:none) Mus musculus bone marrow macrophag... 132 3e-29
CR861433_1(CR861433|pid:none) Pongo abelii mRNA; cDNA DKFZp459J2... 132 3e-29
AL845492_2(AL845492|pid:none) Mouse DNA sequence from clone RP23... 132 3e-29
AF036956_1(AF036956|pid:none) Homo sapiens neuroblastoma apoptos... 132 3e-29
AK137292_1(AK137292|pid:none) Mus musculus adult male urinary bl... 132 3e-29
AJ010351_1(AJ010351|pid:none) Rattus norvegicus mRNA for ETR-R3a... 132 3e-29
AL845515_7(AL845515|pid:none) Mouse DNA sequence from clone RP23... 132 3e-29
(Q3U7J8) RecName: Full=CUG-BP- and ETR-3-like factor 2; ... 132 3e-29
AF090696_1(AF090696|pid:none) Mus musculus apoptosis-related RNA... 132 3e-29
AF090694_1(AF090694|pid:none) Homo sapiens apoptosis-related RNA... 132 3e-29
AL845492_1(AL845492|pid:none) Mouse DNA sequence from clone RP23... 132 3e-29
AK314087_1(AK314087|pid:none) Homo sapiens cDNA, FLJ94762, highl... 132 3e-29
AK164914_1(AK164914|pid:none) Mus musculus 0 day neonate lung cD... 132 3e-29
(O95319) RecName: Full=CUG-BP- and ETR-3-like factor 2; ... 132 3e-29
CR860449_1(CR860449|pid:none) Pongo abelii mRNA; cDNA DKFZp459A1... 132 3e-29
(Q7T2T1) RecName: Full=CUG-BP- and ETR-3-like factor 2; ... 131 7e-29
AY288985_1(AY288985|pid:none) Gallus gallus ELAV-type RNA-bindin... 131 7e-29
AC119289_14(AC119289|pid:none) Oryza sativa (japonica cultivar-g... 130 1e-28
(Q6PF35) RecName: Full=CUG-BP- and ETR-3-like factor 1-B; ... 130 2e-28
BC004145_1(BC004145|pid:none) Homo sapiens trinucleotide repeat ... 130 2e-28
AL589765_4(AL589765|pid:none) Human DNA sequence from clone RP11... 130 2e-28
EF520343_1(EF520343|pid:none) Gallus gallus CUG binding protein ... 129 3e-28
U80455_2(U80455|pid:none) Caenorhabditis elegans cosmid T01D1, c... 129 4e-28
EF523766_1(EF523766|pid:none) Caenorhabditis elegans ELAV-type R... 129 4e-28
EF523768_1(EF523768|pid:none) Caenorhabditis elegans ELAV-type R... 129 4e-28
U80455_3(U80455|pid:none) Caenorhabditis elegans cosmid T01D1, c... 129 4e-28
(Q5F3T7) RecName: Full=CUG-BP- and ETR-3-like factor 1; ... 129 5e-28
AB384673_1(AB384673|pid:none) Synthetic construct DNA, clone: pF... 127 2e-27
BC049453_1(BC049453|pid:none) Danio rerio CUG triplet repeat, RN... 127 2e-27
AK014492_1(AK014492|pid:none) Mus musculus 14 days embryo liver ... 126 2e-27
AL672241_9(AL672241|pid:none) Mouse DNA sequence from clone RP23... 126 2e-27
AK156725_1(AK156725|pid:none) Mus musculus activated spleen cDNA... 126 2e-27
AK143698_1(AK143698|pid:none) Mus musculus 6 days neonate spleen... 126 2e-27
AF267535_1(AF267535|pid:none) Mus musculus CUG-binding protein L... 126 2e-27
BC151433_1(BC151433|pid:none) Bos taurus CUG triplet repeat, RNA... 126 3e-27
U63289_1(U63289|pid:none) Human RNA-binding protein CUG-BP/hNab5... 126 3e-27
BC070706_1(BC070706|pid:none) Xenopus laevis CUG-BP- and ETR-3-l... 125 7e-27
AK304430_1(AK304430|pid:none) Homo sapiens cDNA FLJ61559 complet... 125 7e-27
AY342388_1(AY342388|pid:none) Caenorhabditis elegans putative RN... 125 7e-27
EU743743_1(EU743743|pid:none) Xenopus laevis RNA binding protein... 124 9e-27
AM910995_382(AM910995|pid:none) Plasmodium knowlesi strain H chr... 114 1e-23
AE014187_93(AE014187|pid:none) Plasmodium falciparum 3D7 chromos... 113 2e-23
AM436394_3(AM436394|pid:none) Vitis vinifera contig VV78X113742.... 113 3e-23
BT029831_1(BT029831|pid:none) Bos taurus trinucleotide repeat co... 112 4e-23
AF314172_1(AF314172|pid:none) Mus musculus BRUNOL2 (Brunol2) mRN... 102 5e-20
AK299983_1(AK299983|pid:none) Homo sapiens cDNA FLJ50653 complet... 102 5e-20
BT058026_1(BT058026|pid:none) Drosophila melanogaster MIP02242 f... 100 1e-19
BT081408_1(BT081408|pid:none) Drosophila melanogaster MIP06224 f... 100 1e-19
AL935165_4(AL935165|pid:none) Zebrafish DNA sequence from clone ... 100 2e-19
AK302681_1(AK302681|pid:none) Homo sapiens cDNA FLJ52370 complet... 100 2e-19
AK297313_1(AK297313|pid:none) Homo sapiens cDNA FLJ50576 complet... 100 2e-19
AK295511_1(AK295511|pid:none) Homo sapiens cDNA FLJ51739 complet... 100 2e-19
AC135465_22(AC135465|pid:none) Medicago truncatula clone mth2-24... 100 2e-19
CR761704_1(CR761704|pid:none) Xenopus tropicalis finished cDNA, ... 99 4e-19
AB325927_1(AB325927|pid:none) Sorogena stoianovitchae stf4 mRNA ... 99 7e-19
AY036909_1(AY036909|pid:none) Homo sapiens HUC (ELAVL3) mRNA, co... 99 7e-19
AX463223_1(AX463223|pid:none) Sequence 24 from Patent WO0249625.... 99 7e-19
(Q60900) RecName: Full=ELAV-like protein 3; AltName: Full=Hu-ant... 98 1e-18
BC136134_1(BC136134|pid:none) Xenopus tropicalis ELAV (embryonic... 97 2e-18
EF384209_1(EF384209|pid:none) Platynereis dumerilii Elav mRNA, c... 97 3e-18
AY016023_9(AY016023|pid:none) Sphoeroides nephelus alpha globin ... 97 3e-18
BC086269_1(BC086269|pid:none) Xenopus laevis hypothetical LOC495... 97 3e-18
AE014134_536(AE014134|pid:none) Drosophila melanogaster chromoso... 96 3e-18
BC065343_1(BC065343|pid:none) Danio rerio ELAV (embryonic lethal... 96 3e-18
AK135030_1(AK135030|pid:none) Mus musculus adult male olfactory ... 96 5e-18
BC094189_1(BC094189|pid:none) Xenopus laevis ELAV (embryonic let... 96 5e-18
BC127338_1(BC127338|pid:none) Xenopus tropicalis ELAV (embryonic... 96 5e-18
AK148528_1(AK148528|pid:none) Mus musculus adult pancreas islet ... 96 5e-18
BC170539_1(BC170539|pid:none) Xenopus laevis elav like 1, mRNA (... 96 5e-18
BC072716_1(BC072716|pid:none) Danio rerio zgc:91918, mRNA (cDNA ... 96 6e-18
AB209294_1(AB209294|pid:none) Homo sapiens mRNA for ELAV (embryo... 96 6e-18
AL837505_1(AL837505|pid:none) Mouse DNA sequence from clone RP23... 96 6e-18
AY035379_1(AY035379|pid:none) Mus musculus ELAV-like neuronal pr... 96 6e-18
I39077(I39077) RNA-binding protein Hel-N2 - human &U29943_1(U29... 96 6e-18
AL837505_7(AL837505|pid:none) Mouse DNA sequence from clone RP23... 96 6e-18
AK141919_1(AK141919|pid:none) Mus musculus 12 days embryo spinal... 96 6e-18
AY035378_1(AY035378|pid:none) Mus musculus ELAV-like neuronal pr... 96 6e-18
AL837505_4(AL837505|pid:none) Mouse DNA sequence from clone RP23... 96 6e-18
AK034536_1(AK034536|pid:none) Mus musculus 12 days embryo embryo... 96 6e-18
CR860401_1(CR860401|pid:none) Pongo abelii mRNA; cDNA DKFZp459N1... 96 6e-18
AL837505_6(AL837505|pid:none) Mouse DNA sequence from clone RP23... 96 6e-18
AL837505_2(AL837505|pid:none) Mouse DNA sequence from clone RP23... 96 6e-18
AX463221_1(AX463221|pid:none) Sequence 22 from Patent WO0249625.... 96 6e-18
(Q60899) RecName: Full=ELAV-like protein 2; AltName: Full=Hu-ant... 96 6e-18
AL161628_3(AL161628|pid:none) Human DNA sequence from clone RP11... 96 6e-18
(Q12926) RecName: Full=ELAV-like protein 2; AltName: Full=Hu-ant... 96 6e-18
BC036071_1(BC036071|pid:none) Homo sapiens ELAV (embryonic letha... 96 6e-18
AE014134_2270(AE014134|pid:none) Drosophila melanogaster chromos... 95 8e-18
AK229352_1(AK229352|pid:none) Arabidopsis thaliana mRNA for puta... 95 8e-18
FN357392_14(FN357392|pid:none) Schistosoma mansoni genome sequen... 95 1e-17
BT045701_1(BT045701|pid:none) Salmo salar clone ssal-rgf-529-045... 95 1e-17
AL583843_2(AL583843|pid:none) Human DNA sequence from clone RP11... 94 1e-17
AL627425_2(AL627425|pid:none) Mouse DNA sequence from clone RP23... 94 1e-17
AK301013_1(AK301013|pid:none) Homo sapiens cDNA FLJ60076 complet... 94 1e-17
AL627425_4(AL627425|pid:none) Mouse DNA sequence from clone RP23... 94 1e-17
BC099348_1(BC099348|pid:none) Xenopus laevis RNA-binding protein... 94 1e-17
(P26378) RecName: Full=ELAV-like protein 4; AltName: Full=Parane... 94 1e-17
AK298817_1(AK298817|pid:none) Homo sapiens cDNA FLJ51957 complet... 94 1e-17
AL583843_1(AL583843|pid:none) Human DNA sequence from clone RP11... 94 1e-17
AF176675_1(AF176675|pid:none) Gallus gallus RNA-binding protein ... 94 1e-17
AE014134_533(AE014134|pid:none) Drosophila melanogaster chromoso... 94 1e-17
AF041341_1(AF041341|pid:none) Mus musculus RNA binding protein E... 94 1e-17
I51678(I51678) ribonucleoprotein - African clawed frog &U17599_... 94 1e-17
AL583843_3(AL583843|pid:none) Human DNA sequence from clone RP11... 94 1e-17
AB168603_1(AB168603|pid:none) Macaca fascicularis testis cDNA cl... 94 1e-17
BC102495_1(BC102495|pid:none) Bos taurus ELAV (embryonic lethal,... 94 1e-17
S55886_1(S55886|pid:none) Drosophila melanogaster RRM9 (rbp9) ge... 94 1e-17
(Q61701) RecName: Full=ELAV-like protein 4; AltName: Full=Parane... 94 1e-17
AK079088_1(AK079088|pid:none) Mus musculus adult male diencephal... 94 1e-17
AF176673_1(AF176673|pid:none) Gallus gallus RNA-binding protein ... 94 2e-17
A40252(A40252)elav protein - fruit fly (Drosophila virilis) 94 2e-17
AY854826_1(AY854826|pid:none) Drosophila americana strain FP99.2... 94 2e-17
EF635076_1(EF635076|pid:none) Drosophila littoralis strain Kemi9... 94 2e-17
EF188910_1(EF188910|pid:none) Drosophila recens strain NH_ST_6 e... 94 2e-17
AY854860_1(AY854860|pid:none) Drosophila americana strain OR01.4... 94 2e-17
EF188911_1(EF188911|pid:none) Drosophila recens strain NH_ST_7 e... 94 2e-17
EF188917_1(EF188917|pid:none) Drosophila recens strain NY_ST_14 ... 94 2e-17
EF188903_1(EF188903|pid:none) Drosophila recens strain MI_ST_6 e... 94 2e-17
AY854839_1(AY854839|pid:none) Drosophila americana strain FP99.5... 94 2e-17
EF188894_1(EF188894|pid:none) Drosophila recens strain MN_ST_3 e... 94 2e-17
EF188893_1(EF188893|pid:none) Drosophila recens strain MN_ST_2 e... 94 2e-17
EF188935_1(EF188935|pid:none) Drosophila subquinaria elav (elav)... 94 2e-17
EF635077_1(EF635077|pid:none) Drosophila montana strain Kemi96 e... 94 2e-17
EF188916_1(EF188916|pid:none) Drosophila recens strain NY_ST_13 ... 94 2e-17
EF188892_1(EF188892|pid:none) Drosophila recens strain MN_ST_1 e... 94 2e-17
AY854856_1(AY854856|pid:none) Drosophila americana strain OR01.1... 94 2e-17
EF188900_1(EF188900|pid:none) Drosophila recens strain MI_ST_14 ... 94 2e-17
AK089088_1(AK089088|pid:none) Mus musculus 2 days neonate thymus... 94 2e-17
BX548154_1(BX548154|pid:none) clone A24K23, A41I8 of Tetraodon n... 94 2e-17
AK014133_1(AK014133|pid:none) Mus musculus 13 days embryo head c... 94 2e-17
U80746_1(U80746|pid:none) Homo sapiens CAGH4 mRNA, partial cds. 93 3e-17
AK298852_1(AK298852|pid:none) Homo sapiens cDNA FLJ51939 complet... 93 3e-17
AF176674_1(AF176674|pid:none) Gallus gallus RNA-binding protein ... 92 5e-17
EF520345_1(EF520345|pid:none) Gallus gallus CUG-BP and ETR-3-lik... 92 7e-17
AB073375_1(AB073375|pid:none) Ciona savignyi mRNA for Cs-ETR1, p... 92 7e-17
(P70372) RecName: Full=ELAV-like protein 1; AltName: Full=Hu-ant... 92 7e-17
AE014296_2444(AE014296|pid:none) Drosophila melanogaster chromos... 92 7e-17
AK124858_1(AK124858|pid:none) Homo sapiens cDNA FLJ42868 fis, cl... 91 1e-16
AK294382_1(AK294382|pid:none) Homo sapiens cDNA FLJ55572 complet... 91 1e-16
AK034216_1(AK034216|pid:none) Mus musculus adult male diencephal... 91 1e-16
FN357324_7(FN357324|pid:none) Schistosoma mansoni genome sequenc... 91 1e-16
T29470(T29470)hypothetical protein T01D1.2b - Caenorhabditis ele... 91 2e-16
U80455_6(U80455|pid:none) Caenorhabditis elegans cosmid T01D1, c... 91 2e-16
BC044184_1(BC044184|pid:none) Danio rerio ELAV (embryonic lethal... 91 2e-16
X85111_1(X85111|pid:none) X.laevis mRNA for XEL-1. 90 2e-16
AX969846_1(AX969846|pid:none) Sequence 649 from Patent EP1104808. 89 6e-16
AK161667_1(AK161667|pid:none) Mus musculus 8 days embryo whole b... 89 6e-16
AF248649_1(AF248649|pid:none) Homo sapiens RNA-binding protein B... 89 7e-16
BC116459_1(BC116459|pid:none) Xenopus laevis ribonucleoprotein, ... 89 7e-16
DQ344977_1(DQ344977|pid:none) Schmidtea mediterranea bruno-like ... 88 1e-15
AK083461_1(AK083461|pid:none) Mus musculus 9 days embryo whole b... 87 2e-15
AB207268_1(AB207268|pid:none) Bombyx mori Sxl mRNA for sex-letha... 86 4e-15
BT074644_1(BT074644|pid:none) Osmerus mordax clone omor-rgc-516-... 86 4e-15
DQ209268_1(DQ209268|pid:none) Bombyx mori sex-lethal isoform 1 (... 86 4e-15
AY956294_1(AY956294|pid:none) Aplysia californica ELAV 2-like pr... 86 4e-15
AK342924_1(AK342924|pid:none) Acyrthosiphon pisum ACYPI000005 mR... 86 5e-15
CR940347_20(CR940347|pid:none) Theileria annulata strain Ankara ... 85 1e-14
AP006062_18(AP006062|pid:none) Oryza sativa Japonica Group genom... 84 2e-14
AY538250_1(AY538250|pid:none) Bradysia coprophila sex-lethal (Sx... 83 4e-14
AM494957_402(AM494957|pid:none) Leishmania braziliensis chromoso... 82 5e-14
CT005271_474(CT005271|pid:none) Leishmania major strain Friedlin... 82 5e-14
EF147288_1(EF147288|pid:none) Populus trichocarpa clone WS0122_E... 82 9e-14
AE014297_2127(AE014297|pid:none) Drosophila melanogaster chromos... 82 9e-14
FN314364_1(FN314364|pid:none) Schistosoma japonicum isolate Anhu... 81 1e-13
AM502252_395(AM502252|pid:none) Leishmania infantum chromosome 34. 81 1e-13
(Q0V9L3) RecName: Full=CUG-BP- and ETR-3-like factor 4; ... 81 2e-13
AY313137_1(AY313137|pid:none) Saccoglossus kowalevskii Hu/elav m... 81 2e-13
AY178581_1(AY178581|pid:none) Sciara ocellaris sex-lethal mRNA, ... 81 2e-13
AK070743_1(AK070743|pid:none) Oryza sativa Japonica Group cDNA c... 80 2e-13
FN357488_2(FN357488|pid:none) Schistosoma mansoni genome sequenc... 80 3e-13
FB912199_1(FB912199|pid:none) Sequence 131472 from Patent WO2008... 80 3e-13
AE014298_1908(AE014298|pid:none) Drosophila melanogaster chromos... 80 3e-13
EF085266_1(EF085266|pid:none) Picea sitchensis clone WS02718_G07... 79 4e-13
BC043735_1(BC043735|pid:none) Xenopus laevis RNA-binding protein... 79 6e-13
BC135736_1(BC135736|pid:none) Xenopus tropicalis hypothetical pr... 79 6e-13
FB912279_1(FB912279|pid:none) Sequence 131552 from Patent WO2008... 79 6e-13
FJ362376_18(FJ362376|pid:none) Caenorhabditis sp. PS1010 contig ... 79 8e-13
FJ830848_1(FJ830848|pid:none) Triticum aestivum cp31BHv mRNA, pa... 79 8e-13
T24138(T24138) hypothetical protein R10E4.2b - Caenorhabditis el... 78 1e-12
T24137(T24137) hypothetical protein R10E4.2a - Caenorhabditis el... 78 1e-12
(P42731) RecName: Full=Polyadenylate-binding protein 2; ... 78 1e-12
AJ715415_1(AJ715415|pid:none) Bactrocera oleae mRNA for sex-leth... 77 2e-12
AF349964_1(AF349964|pid:none) Daucus carota poly(A)-binding prot... 77 2e-12
AM910996_540(AM910996|pid:none) Plasmodium knowlesi strain H chr... 77 3e-12
AB050498_1(AB050498|pid:none) Gallus gallus etr-3 mRNA for elav-... 77 3e-12
AK067492_1(AK067492|pid:none) Oryza sativa Japonica Group cDNA c... 77 3e-12
AF026145_1(AF026145|pid:none) Ceratitis capitata sex-lethal homo... 77 3e-12
AL844509_593(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 76 4e-12
FB912195_1(FB912195|pid:none) Sequence 131468 from Patent WO2008... 76 4e-12
AM451268_1(AM451268|pid:none) Vitis vinifera contig VV78X095284.... 76 4e-12
BT033456_1(BT033456|pid:none) Zea mays full-length cDNA clone ZM... 76 4e-12
CP001325_185(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 76 5e-12
AF190655_1(AF190655|pid:none) Nicotiana tabacum poly(A)-binding ... 76 5e-12
AB050497_1(AB050497|pid:none) Gallus gallus brul mRNA for bruno-... 76 5e-12
BT053782_1(BT053782|pid:none) Zea mays full-length cDNA clone ZM... 75 6e-12
EU955573_1(EU955573|pid:none) Zea mays clone 1537388 ribonucleop... 75 6e-12
AM910993_99(AM910993|pid:none) Plasmodium knowlesi strain H chro... 75 1e-11
AJ000546_1(AJ000546|pid:none) Megaselia scalaris mRNA for Sex-le... 75 1e-11
AY094948_1(AY094948|pid:none) Drosophila melanogaster RH63980 fu... 75 1e-11
BC071591_1(BC071591|pid:none) Homo sapiens poly(A) binding prote... 75 1e-11
AL365277_14(AL365277|pid:none) Human DNA sequence from clone RP1... 75 1e-11
(Q13310) RecName: Full=Polyadenylate-binding protein 4; ... 75 1e-11
AK067252_1(AK067252|pid:none) Oryza sativa Japonica Group cDNA c... 74 1e-11
AF234183_1(AF234183|pid:none) Lucilia cuprina sex-lethal protein... 74 1e-11
EF676928_1(EF676928|pid:none) Picea sitchensis clone WS02758_C10... 74 2e-11
(Q3ZBP3) RecName: Full=RNA-binding motif, single-stranded-intera... 74 2e-11
(P19682) RecName: Full=28 kDa ribonucleoprotein, chloroplastic; ... 74 2e-11
CP000512_4693(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 74 2e-11
FB912185_1(FB912185|pid:none) Sequence 131458 from Patent WO2008... 74 2e-11
CU928179_297(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 74 2e-11
(Q6CSV3) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 74 2e-11
AK145897_1(AK145897|pid:none) Mus musculus 14 days pregnant adul... 74 2e-11
AK069121_1(AK069121|pid:none) Oryza sativa Japonica Group cDNA c... 74 2e-11
CR855235_3(CR855235|pid:none) Oryza sativa genomic DNA, chromoso... 74 2e-11
AB009975_1(AB009975|pid:none) Gallus gallus mRNA for MSSP-1, com... 74 2e-11
(P19683) RecName: Full=31 kDa ribonucleoprotein, chloroplastic; ... 74 2e-11
BT038475_1(BT038475|pid:none) Zea mays full-length cDNA clone ZM... 73 3e-11
GN344103_1(GN344103|pid:none) Sequence 83 from Patent WO20090439... 73 3e-11
AK292789_1(AK292789|pid:none) Homo sapiens cDNA FLJ77203 complet... 73 3e-11
AB050499_1(AB050499|pid:none) Mus musculus brul mRNA for bruno-l... 73 3e-11
FN357347_16(FN357347|pid:none) Schistosoma mansoni genome sequen... 73 3e-11
AK030609_1(AK030609|pid:none) Mus musculus adult male pituitary ... 73 3e-11
AK041098_1(AK041098|pid:none) Mus musculus adult male aorta and ... 73 3e-11
AK030478_1(AK030478|pid:none) Mus musculus adult male pituitary ... 73 3e-11
AK052196_1(AK052196|pid:none) Mus musculus 13 days embryo heart ... 73 3e-11
AK297812_1(AK297812|pid:none) Homo sapiens cDNA FLJ61322 complet... 73 3e-11
BC012992_1(BC012992|pid:none) Homo sapiens RNA binding motif, si... 73 3e-11
X77494_1(X77494|pid:none) H.sapiens MSSP-2 mRNA. 73 3e-11
D38485_1(D38485|pid:none) Triticum aestivum mRNA for Ps16 protei... 73 3e-11
AY150521_1(AY150521|pid:none) Vitis vinifera putative heterogene... 73 3e-11
(P29558) RecName: Full=RNA-binding motif, single-stranded-intera... 73 3e-11
FB912191_1(FB912191|pid:none) Sequence 131464 from Patent WO2008... 73 3e-11
(Q8BWL5) RecName: Full=RNA-binding motif, single-stranded-intera... 73 3e-11
S53612(S53612;S41959;I38043)gene MSSP-2 protein - human 73 3e-11
AC146948_16(AC146948|pid:none) Oryza sativa (japonica cultivar-g... 73 4e-11
FB912281_1(FB912281|pid:none) Sequence 131554 from Patent WO2008... 73 4e-11
AK161102_1(AK161102|pid:none) Mus musculus 10 days neonate skin ... 73 4e-11
FJ861207_1(FJ861207|pid:none) Octopus bimaculoides Elav mRNA, pa... 73 4e-11
AC157373_6(AC157373|pid:none) Medicago truncatula chromosome 7 c... 73 4e-11
FB912275_1(FB912275|pid:none) Sequence 131548 from Patent WO2008... 73 4e-11
AP008217_632(AP008217|pid:none) Oryza sativa (japonica cultivar-... 73 4e-11
I38042(I38042) single-stranded DNA-binding protein MSSP-1 - huma... 73 4e-11
BT079691_1(BT079691|pid:none) Esox lucius clone eluc-evq-520-268... 73 4e-11
EU972185_1(EU972185|pid:none) Zea mays clone 377000 polyadenylat... 73 4e-11
AY236872_1(AY236872|pid:none) Homo sapiens RNA binding motif sin... 73 4e-11
AK164307_1(AK164307|pid:none) Mus musculus 12 days embryo spinal... 73 4e-11
BT038108_1(BT038108|pid:none) Zea mays full-length cDNA clone ZM... 73 4e-11
(Q3ZC34) RecName: Full=RNA-binding motif, single-stranded-intera... 73 4e-11
AK133054_1(AK133054|pid:none) Mus musculus adult male testis cDN... 73 4e-11
AE014298_1040(AE014298|pid:none) Drosophila melanogaster chromos... 72 5e-11
EF148773_1(EF148773|pid:none) Populus trichocarpa x Populus delt... 72 5e-11
BT003583_1(BT003583|pid:none) Drosophila melanogaster LD15933 fu... 72 5e-11
AE014298_1044(AE014298|pid:none) Drosophila melanogaster chromos... 72 5e-11
AE014298_1049(AE014298|pid:none) Drosophila melanogaster chromos... 72 5e-11
B39725(B39725) sex-lethal sex determination protein MS11 - fruit... 72 5e-11
AF025689_1(AF025689|pid:none) Musca domestica clone MdSxlc1 Sex-... 72 5e-11
AE014298_1041(AE014298|pid:none) Drosophila melanogaster chromos... 72 5e-11
EF086557_1(EF086557|pid:none) Picea sitchensis clone WS02752_O04... 72 5e-11
AM447494_2(AM447494|pid:none) Vitis vinifera contig VV78X024983.... 72 5e-11
AK126716_1(AK126716|pid:none) Homo sapiens cDNA FLJ44762 fis, cl... 72 7e-11
FB912225_1(FB912225|pid:none) Sequence 131498 from Patent WO2008... 72 7e-11
AF411956_7(AF411956|pid:none) Takifugu rubripes lck gene locus, ... 72 9e-11
EF576487_1(EF576487|pid:none) Oryza sativa (indica cultivar-grou... 72 9e-11
(P04147) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 72 9e-11
FB912259_1(FB912259|pid:none) Sequence 131532 from Patent WO2008... 72 9e-11
(Q24668) RecName: Full=Protein sex-lethal; 72 9e-11
(Q5PQP1) RecName: Full=RNA-binding motif, single-stranded-intera... 72 9e-11
(Q5AI15) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 72 9e-11
AY360385_9(AY360385|pid:none) Oryza sativa (japonica cultivar-gr... 72 9e-11
S19873(S19873)single-stranded DNA-binding protein - human 72 9e-11
FB912187_1(FB912187|pid:none) Sequence 131460 from Patent WO2008... 71 1e-10
AC122728_12(AC122728|pid:none) Medicago truncatula clone mth2-22... 71 1e-10
(Q6BI95) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 71 1e-10
AE013599_4123(AE013599|pid:none) Drosophila melanogaster chromos... 71 1e-10
BT053136_1(BT053136|pid:none) Medicago truncatula clone MTYFL_FM... 71 1e-10
AP004339_10(AP004339|pid:none) Oryza sativa Japonica Group genom... 71 1e-10
(Q05196) RecName: Full=Polyadenylate-binding protein 5; ... 71 2e-10
CP000081_499(CP000081|pid:none) Leishmania major chromosome 35, ... 71 2e-10
D31712_1(D31712|pid:none) Arabidopsis thaliana gene for RNA-bind... 71 2e-10
AC002391_1(AC002391|pid:none) Arabidopsis thaliana chromosome 2 ... 71 2e-10
EF677394_1(EF677394|pid:none) Picea sitchensis clone WS02768_B11... 71 2e-10
X57955_1(X57955|pid:none) S.oleracea mRNA for a 28kD RNA binding... 71 2e-10
CT005264_8(CT005264|pid:none) Leishmania major strain Friedlin, ... 71 2e-10
(Q04836) RecName: Full=31 kDa ribonucleoprotein, chloroplastic; ... 71 2e-10
BC121675_1(BC121675|pid:none) Xenopus tropicalis hypothetical pr... 71 2e-10
AC148756_6(AC148756|pid:none) Medicago truncatula clone mth2-22d... 70 2e-10
BC053126_1(BC053126|pid:none) Danio rerio poly(A) binding protei... 70 2e-10
AE014298_202(AE014298|pid:none) Drosophila melanogaster chromoso... 70 2e-10
DQ336954_2(DQ336954|pid:none) Glycine max cultivar Williams 82 c... 70 2e-10
BT052605_1(BT052605|pid:none) Medicago truncatula clone MTYFD_FE... 70 2e-10
AE014298_203(AE014298|pid:none) Drosophila melanogaster chromoso... 70 2e-10
(Q8VC70) RecName: Full=RNA-binding motif, single-stranded-intera... 70 2e-10
CP000539_3972(CP000539|pid:none) Acidovorax sp. JS42, complete g... 70 3e-10
AK147838_1(AK147838|pid:none) Mus musculus melanocyte cDNA, RIKE... 70 3e-10
AJ303457_1(AJ303457|pid:none) Arabidopsis thaliana partial mRNA ... 70 3e-10
(Q15434) RecName: Full=RNA-binding motif, single-stranded-intera... 70 3e-10
BX004991_3(BX004991|pid:none) Zebrafish DNA sequence from clone ... 70 3e-10
AC148486_19(AC148486|pid:none) Medicago truncatula clone mth2-56... 70 3e-10
AB053355_1(AB053355|pid:none) Halocynthia roretzi HrTLC2 mRNA, c... 70 3e-10
CR954212_4(CR954212|pid:none) Ostreococcus tauri strain OTTH0595... 70 3e-10
BT070011_1(BT070011|pid:none) Zea mays full-length cDNA clone ZM... 70 3e-10
EU963022_1(EU963022|pid:none) Zea mays clone 247507 plastid-spec... 70 3e-10
FB912277_1(FB912277|pid:none) Sequence 131550 from Patent WO2008... 70 3e-10
FB912193_1(FB912193|pid:none) Sequence 131466 from Patent WO2008... 70 3e-10
AK103490_1(AK103490|pid:none) Oryza sativa Japonica Group cDNA c... 70 3e-10
CP001326_401(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 70 3e-10
FB912255_1(FB912255|pid:none) Sequence 131528 from Patent WO2008... 70 3e-10
FB912253_1(FB912253|pid:none) Sequence 131526 from Patent WO2008... 70 3e-10
AY060995_1(AY060995|pid:none) Drosophila melanogaster HL01227 fu... 70 3e-10
AE014296_991(AE014296|pid:none) Drosophila melanogaster chromoso... 70 3e-10
CP000533_110(CP000533|pid:none) Polaromonas naphthalenivorans CJ... 69 5e-10
AM502253_532(AM502253|pid:none) Leishmania infantum chromosome 35. 69 5e-10
U28944_7(U28944|pid:none) Caenorhabditis elegans cosmid C18A3, c... 69 5e-10
BC161141_1(BC161141|pid:none) Xenopus tropicalis RNA binding mot... 69 5e-10
AF240679_1(AF240679|pid:none) Cucumis sativus poly(A)-binding pr... 69 5e-10
S37085(S37085) polyadenylate-binding protein - fern (Anemia phyl... 69 5e-10
T15542(T15542)hypothetical protein C18A3.5 - Caenorhabditis eleg... 69 5e-10
FB912189_1(FB912189|pid:none) Sequence 131462 from Patent WO2008... 69 5e-10
BC076435_1(BC076435|pid:none) Danio rerio zgc:100836, mRNA (cDNA... 69 5e-10
CU928171_601(CU928171|pid:none) Kluyveromyces thermotolerans str... 69 5e-10
U28944_4(U28944|pid:none) Caenorhabditis elegans cosmid C18A3, c... 69 5e-10
AM471738_1(AM471738|pid:none) Vitis vinifera contig VV78X179691.... 69 6e-10
BC065633_1(BC065633|pid:none) Danio rerio zgc:77262, mRNA (cDNA ... 69 6e-10
BT054576_1(BT054576|pid:none) Zea mays full-length cDNA clone ZM... 69 6e-10
BT034281_1(BT034281|pid:none) Zea mays full-length cDNA clone ZM... 69 6e-10
(P27476) RecName: Full=Nuclear localization sequence-binding pro... 69 6e-10
AK060178_1(AK060178|pid:none) Oryza sativa Japonica Group cDNA c... 69 6e-10
BC168959_1(BC168959|pid:none) Rattus norvegicus poly(A) binding ... 69 6e-10
(P31209) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 69 8e-10
M64603_1(M64603|pid:none) Schizosaccharomyces pombe poly(A)-bind... 69 8e-10
FN392322_179(FN392322|pid:none) Pichia pastoris GS115 chromosome... 69 8e-10
CP000583_235(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 69 8e-10
CU928174_487(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 69 8e-10
AJ421781_1(AJ421781|pid:none) Persea americana chloroplast mRNA ... 69 8e-10
AJ720206_1(AJ720206|pid:none) Gallus gallus mRNA for hypothetica... 69 8e-10
AM494971_498(AM494971|pid:none) Leishmania braziliensis chromoso... 68 1e-09
CP000529_1915(CP000529|pid:none) Polaromonas naphthalenivorans C... 68 1e-09
AM486977_3(AM486977|pid:none) Vitis vinifera contig VV78X043978.... 68 1e-09
D82351_1(D82351|pid:none) Human retropseudogene MSSP-1 DNA, comp... 68 1e-09
D31715_1(D31715|pid:none) Arabidopsis thaliana gene for RNA-bind... 68 1e-09
AC136449_14(AC136449|pid:none) Medicago truncatula clone mth2-11... 68 1e-09
AF130355_1(AF130355|pid:none) Neurospora crassa Pad-1 (pad-1) ge... 68 1e-09
FM992688_313(FM992688|pid:none) Candida dubliniensis CD36 chromo... 68 1e-09
AC148528_1(AC148528|pid:none) Medicago truncatula clone mth2-53h... 68 1e-09
CP000267_4159(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 68 1e-09
AM055943_251(AM055943|pid:none) Toxoplasma gondii RH, genomic DN... 68 1e-09
CP001392_3422(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 68 1e-09
T21095(T21095) hypothetical protein F18H3.3a - Caenorhabditis el... 68 1e-09
BT066563_1(BT066563|pid:none) Zea mays full-length cDNA clone ZM... 68 1e-09
T21096(T21096) hypothetical protein F18H3.3b - Caenorhabditis el... 68 1e-09
(P29341) RecName: Full=Polyadenylate-binding protein 1; ... 68 1e-09
CP000881_32(CP000881|pid:none) Hemiselmis andersenii chromosome ... 68 1e-09
AJ719881_1(AJ719881|pid:none) Gallus gallus mRNA for hypothetica... 68 1e-09
(A5DW14) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 68 1e-09
(Q9EPH8) RecName: Full=Polyadenylate-binding protein 1; ... 68 1e-09
AC003979_7(AC003979|pid:none) Arabidopsis thaliana chromosome 1 ... 67 2e-09
CP000542_149(CP000542|pid:none) Verminephrobacter eiseniae EF01-... 67 2e-09
CP000975_286(CP000975|pid:none) Methylacidiphilum infernorum V4,... 67 2e-09
CP001635_5229(CP001635|pid:none) Variovorax paradoxus S110 chrom... 67 2e-09
AK140861_1(AK140861|pid:none) Mus musculus 16 days embryo head c... 67 2e-09
(Q8BHN5) RecName: Full=RNA-binding protein 45; AltName: Full=RNA... 67 2e-09
AK121802_1(AK121802|pid:none) Oryza sativa Japonica Group cDNA c... 67 2e-09
(Q8CFD1) RecName: Full=RNA-binding protein 45; AltName: Full=RNA... 67 2e-09
CR940348_585(CR940348|pid:none) Theileria annulata strain Ankara... 67 2e-09
AK304400_1(AK304400|pid:none) Homo sapiens cDNA FLJ56561 complet... 67 2e-09
BC076931_1(BC076931|pid:none) Xenopus tropicalis polyadenylate-b... 67 2e-09
BT059420_1(BT059420|pid:none) Salmo salar clone ssal-rgf-539-367... 67 2e-09
FJ502080_1(FJ502080|pid:none) Aristichthys nobilis clone B26 pol... 67 2e-09
AF293840_1(AF293840|pid:none) Arabidopsis thaliana poly(A) bindi... 67 2e-09
BC105262_1(BC105262|pid:none) Bos taurus RNA binding motif prote... 67 2e-09
AK067210_1(AK067210|pid:none) Oryza sativa Japonica Group cDNA c... 67 2e-09
BC003283_1(BC003283|pid:none) Mus musculus poly(A) binding prote... 67 2e-09
AL606917_1(AL606917|pid:none) Mouse DNA sequence from clone RP23... 67 2e-09
(Q8IUH3) RecName: Full=RNA-binding protein 45; AltName: Full=RNA... 67 2e-09
AK297327_1(AK297327|pid:none) Homo sapiens cDNA FLJ51677 complet... 67 2e-09
AL606604_19(AL606604|pid:none) Oryza sativa genomic DNA, chromos... 67 2e-09
AL606917_2(AL606917|pid:none) Mouse DNA sequence from clone RP23... 67 2e-09
AY035152_1(AY035152|pid:none) Arabidopsis thaliana putative spli... 67 2e-09
EU959745_1(EU959745|pid:none) Zea mays clone 219749 unknown mRNA. 67 2e-09
(P60047) RecName: Full=Polyadenylate-binding protein 5; ... 67 2e-09
AL122118_1(AL122118|pid:none) Homo sapiens mRNA; cDNA DKFZp434O1... 67 2e-09
AL606917_4(AL606917|pid:none) Mouse DNA sequence from clone RP23... 67 2e-09
BT065041_1(BT065041|pid:none) Zea mays full-length cDNA clone ZM... 67 2e-09
AY062455_1(AY062455|pid:none) Arabidopsis thaliana ubiquitin / r... 67 2e-09
CP000316_4803(CP000316|pid:none) Polaromonas sp. JS666, complete... 67 3e-09
BC059662_1(BC059662|pid:none) Danio rerio poly A binding protein... 67 3e-09
CP000081_411(CP000081|pid:none) Leishmania major chromosome 35, ... 67 3e-09
AY087856_1(AY087856|pid:none) Arabidopsis thaliana clone 38968 m... 67 3e-09
(Q5R8F7) RecName: Full=Polyadenylate-binding protein 1; ... 67 3e-09
(P82277) RecName: Full=30S ribosomal protein 2, chloroplastic; A... 67 3e-09
AP003622_9(AP003622|pid:none) Oryza sativa Japonica Group genomi... 67 3e-09
AC098565_8(AC098565|pid:none) Oryza sativa chromosome 10 clone O... 67 3e-09
AP008216_218(AP008216|pid:none) Oryza sativa (japonica cultivar-... 67 3e-09
S52491(S52491) polyadenylate binding protein II - human &Z48501... 67 3e-09
AC131375_11(AC131375|pid:none) Oryza sativa (japonica cultivar-g... 67 3e-09
(P11940) RecName: Full=Polyadenylate-binding protein 1; ... 67 3e-09
AC006135_14(AC006135|pid:none) Arabidopsis thaliana chromosome 2... 67 3e-09
DQ788634_1(DQ788634|pid:none) Squalus acanthias putative polyade... 67 3e-09
AF224345_1(AF224345|pid:none) Entamoeba histolytica strain HM1-I... 67 3e-09
AC116956_32(AC116956|pid:none) Dictyostelium discoideum chromoso... 67 3e-09
AP008210_632(AP008210|pid:none) Oryza sativa (japonica cultivar-... 66 4e-09
>AC005275_3(AC005275|pid:none) Arabidopsis thaliana BAC F4C21 from
chromosome IV, top arm, near 17 cM, complete sequence.
&AF069442_1(AF069442|pid:none)
&AL161496_5(AL161496|pid:none) &T01382(T01382)
Length = 492
Score = 173 bits (439), Expect = 2e-41
Identities = 84/171 (49%), Positives = 118/171 (69%), Gaps = 1/171 (0%)
Frame = +1
Query: 235 STKLFVGQIPKSFNEEEIKNLFTNIANIESVSLIKNKTTNEPQGCAFVSVPSREEADRAI 414
S KLFVGQIPK +E ++ LF A ++ V++IK+K T +GC F+ PSREEAD+ +
Sbjct: 17 SVKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLV 76
Query: 415 EQLHNSKKFQGVLNNLQVKYADSEQEKLASKLFVGMLPRSYEEEQIRELFEPHGVVEDIC 594
HN K G + LQVKYAD E E+L KLFVGMLP++ E +++ LF +G ++D+
Sbjct: 77 NACHNKKTLPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQ 136
Query: 595 ILRGPNSESKGCGFIKFDNRESALSAIATLNGM-KLDGSPNPLVVKFADTE 744
ILRG SKGC F+K++ +E A+SA+ ++NG K++GS PLVVK+ADTE
Sbjct: 137 ILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTE 187
Score = 108 bits (269), Expect = 9e-22
Identities = 52/87 (59%), Positives = 67/87 (77%)
Frame = +2
Query: 1418 QSVGPQGSNLFVYNIPNYFSDNDLLGLFQQYGIVVSAKVYVDKNTGVSKGFGFVSYDNPA 1597
Q+ GP+G+NLF+YNIP F D +L FQ +GIV+SAKV+VDK TGVSK FGFVSYD+ A
Sbjct: 342 QTEGPEGANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQA 401
Query: 1598 SANLAISNLHGQMMAGKKLKVSLKQTS 1678
+A AI ++G+ + GKKLKV LK+ S
Sbjct: 402 AAQNAIDMMNGRHLGGKKLKVQLKRDS 428
Score = 63.2 bits (152), Expect = 3e-08
Identities = 30/90 (33%), Positives = 56/90 (62%)
Frame = +1
Query: 241 KLFVGQIPKSFNEEEIKNLFTNIANIESVSLIKNKTTNEPQGCAFVSVPSREEADRAIEQ 420
KLFVG +PK+ +E E+++LF+ I+ + +++ +GCAF+ ++E+A A+E
Sbjct: 107 KLFVGMLPKNVSEAEVQSLFSKYGTIKDLQILRGAQQTS-KGCAFLKYETKEQAVSAMES 165
Query: 421 LHNSKKFQGVLNNLQVKYADSEQEKLASKL 510
++ K +G L VK+AD+E+E+ +L
Sbjct: 166 INGKHKMEGSTVPLVVKWADTERERHTRRL 195
Score = 50.8 bits (120), Expect = 2e-04
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = +1
Query: 478 DSEQEKLASKLFVGMLPRSYEEEQIRELFEPHGVVEDICILRGP-NSESKGCGFIKFDNR 654
+ +E+ + KLFVG +P+ E Q+ LF+ VV+++ I++ S+GC F+ +R
Sbjct: 10 EKNEEEESVKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSR 69
Query: 655 ESALSAI-ATLNGMKLDGSPNPLVVKFADTE 744
E A + A N L G+ + L VK+AD E
Sbjct: 70 EEADKLVNACHNKKTLPGANSLLQVKYADGE 100
Score = 39.7 bits (91), Expect = 0.39
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2
Query: 1445 LFVYNIPNYFSDNDLLGLFQQYGIVVSAKVYVDKNTGVSKGFGFVSYDNPASANLAISNL 1624
LFV IP + S++ LL LFQ++ +V + DK T S+G F+ + A+ ++
Sbjct: 20 LFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVNAC 79
Query: 1625 HGQ 1633
H +
Sbjct: 80 HNK 82
Score = 37.4 bits (85), Expect = 1.9
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +1
Query: 502 SKLFVGMLPRSYEEEQIRELFEPHGVVEDICI-LRGPNSESKGCGFIKFDNRESALSAIA 678
+ LF+ +PR + ++++ F+ G+V + + SK GF+ +D++ +A +AI
Sbjct: 349 ANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAID 408
Query: 679 TLNGMKLDG 705
+NG L G
Sbjct: 409 MMNGRHLGG 417
Score = 35.8 bits (81), Expect = 5.6
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = +1
Query: 244 LFVGQIPKSFNEEEIKNLFTNIANIESVSLIKNKTTNEPQGCAFVSVPSREEADRAIEQL 423
LF+ IP+ F ++E+ F + + S + +K T + FVS S+ A AI+ +
Sbjct: 351 LFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAIDMM 410
Query: 424 HNSKKFQGVLNNLQVK 471
N + G +Q+K
Sbjct: 411 -NGRHLGGKKLKVQLK 425
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,177,305,833
Number of extensions: 39299181
Number of successful extensions: 127658
Number of sequences better than 10.0: 3704
Number of HSP's gapped: 124865
Number of HSP's successfully gapped: 8900
Length of query: 627
Length of database: 1,051,180,864
Length adjustment: 135
Effective length of query: 492
Effective length of database: 614,245,399
Effective search space: 302208736308
Effective search space used: 302208736308
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
3 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
2 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
2 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |