| Contig-U11844-1 |
| Contig ID |
Contig-U11844-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1421 |
| Chromosome number (1..6, M) |
5 |
| Chromosome length |
5062330 |
| Start point |
926224 |
| End point |
924784 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
21 |
| Number of EST |
28 |
| Link to clone list |
U11844 |
| List of clone(s) |
est1=VHP725F,1,639
est2=VHF103F,5,639
est3=VHM209F,7,639
est4=VHK529F,15,497
est5=VHA603F,24,639
est6=CHM360F,29,638
est7=VHA102F,37,637
est8=VHQ195F,37,639
est9=VHN790Z,640,1365
est10=VHQ195Z,641,1413
est11=CHM360Z,642,1421
est12=VHI837Z,649,1408
est13=VHA603Z,651,1405
est14=VHO892Z,651,1430
est15=VHM267Z,670,1355
est16=VHP604Z,698,1430
est17=VHK552Z,710,1414
est18=VHM209Z,712,1411
est19=VHO747Z,752,1177
est20=VHL233Z,757,1413
est21=VHL567Z,761,1192
est22=VHA102Z,774,1439
est23=VHN155Z,776,1355
est24=VHG471Z,834,1426
est25=VHG137Z,848,1351
est26=VHP725Z,916,1417
est27=VHO548Z,995,1355
est28=VHF103Z,1196,1404
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.27 |
| Homology vs DNA |
Query= Contig-U11844-1 (Contig-U11844-1Q) /CSM_Contig/Contig-U11844-1Q.Seq.d
(1431 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ436721) Dictyostelium discoideum cDNA clone:ddv32e02, 3' ... 733 0.0 3
(BJ444190) Dictyostelium discoideum cDNA clone:ddv55e18, 3' ... 696 0.0 3
(BJ443319) Dictyostelium discoideum cDNA clone:ddv52g13, 3' ... 557 0.0 4
(BJ446814) Dictyostelium discoideum cDNA clone:ddv63m23, 3' ... 472 0.0 4
(BJ446231) Dictyostelium discoideum cDNA clone:ddv62g02, 3' ... 472 0.0 5
(BJ445854) Dictyostelium discoideum cDNA clone:ddv60h24, 3' ... 472 0.0 4
(BJ444029) Dictyostelium discoideum cDNA clone:ddv55a04, 3' ... 472 0.0 4
(BJ383017) Dictyostelium discoideum cDNA clone:ddc46h15, 3' ... 472 0.0 4
(BJ445208) Dictyostelium discoideum cDNA clone:ddv58d23, 3' ... 466 0.0 4
(BJ441958) Dictyostelium discoideum cDNA clone:ddv48j10, 3' ... 466 0.0 4
(BJ425213) Dictyostelium discoideum cDNA clone:ddv55a04, 5' ... 718 0.0 3
(BJ421203) Dictyostelium discoideum cDNA clone:ddv41e01, 5' ... 718 0.0 3
(BJ427379) Dictyostelium discoideum cDNA clone:ddv62b07, 5' ... 718 0.0 3
(BJ418220) Dictyostelium discoideum cDNA clone:ddv32e02, 5' ... 718 0.0 3
(BJ368410) Dictyostelium discoideum cDNA clone:ddc46h15, 5' ... 706 0.0 3
(BJ427883) Dictyostelium discoideum cDNA clone:ddv63m23, 5' ... 718 0.0 3
(BJ417907) Dictyostelium discoideum cDNA clone:ddv31c01, 5' ... 716 0.0 3
(BJ436384) Dictyostelium discoideum cDNA clone:ddv31c01, 3' ... 341 0.0 4
(BJ443532) Dictyostelium discoideum cDNA clone:ddv53a10, 3' ... 454 0.0 4
(BJ444859) Dictyostelium discoideum cDNA clone:ddv57m13, 3' ... 466 0.0 3
(BJ440437) Dictyostelium discoideum cDNA clone:ddv43n18, 3' ... 373 0.0 3
(BJ440330) Dictyostelium discoideum cDNA clone:ddv43i09, 3' ... 319 0.0 3
(BJ424410) Dictyostelium discoideum cDNA clone:ddv52i07, 5' ... 438 0.0 3
(BJ443907) Dictyostelium discoideum cDNA clone:ddv54e17, 3' ... 502 0.0 2
(BJ446281) Dictyostelium discoideum cDNA clone:ddv62b07, 3' ... 337 e-180 4
(BJ445725) Dictyostelium discoideum cDNA clone:ddv60n11, 3' ... 400 e-155 3
(BJ445730) Dictyostelium discoideum cDNA clone:ddv60o11, 3' ... 295 e-118 4
(BJ439618) Dictyostelium discoideum cDNA clone:ddv41e01, 3' ... 198 9e-76 2
(CZ748593) OC__Ba0097K24.r OC__Ba Oryza coarctata genomic cl... 60 2e-04 1
(CA193067) SCRLAD1041A09.g AD1 Saccharum officinarum cDNA cl... 52 0.059 1
(CA193065) SCRLAD1041A07.g AD1 Saccharum officinarum cDNA cl... 52 0.059 1
(CA142010) SCMCRT2086B02.g RT2 Saccharum officinarum cDNA cl... 52 0.059 1
(AL928574) Mouse DNA sequence from clone RP23-332L19 on chro... 50 0.23 1
(EI490366) PV_GBa0106E21.r PV_GBa Phaseolus vulgaris genomic... 48 0.93 1
(EI486971) PV_GBa0101K06.r PV_GBa Phaseolus vulgaris genomic... 48 0.93 1
(EI423541) PV_GBa0012M17.r PV_GBa Phaseolus vulgaris genomic... 48 0.93 1
(DB775057) Apis mellifera head cDNA, RIKEN full-length enric... 48 0.93 1
(DB774013) Apis mellifera head cDNA, RIKEN full-length enric... 48 0.93 1
(DB760399) Apis mellifera head cDNA, RIKEN full-length enric... 48 0.93 1
(DB760156) Apis mellifera head cDNA, RIKEN full-length enric... 48 0.93 1
(BI507105) BB170031A20G05.5 Bee Brain Normalized/Subtracted ... 48 0.93 1
(AC200333) Pongo abelii BAC clone CH276-298G8 from chromosom... 36 2.4 6
(EI500393) PV_GBa0120B13.f PV_GBa Phaseolus vulgaris genomic... 46 3.7 1
(CL471935) SAIL_170_C02.v1 SAIL Collection Arabidopsis thali... 46 3.7 1
(CP000609) Methanococcus maripaludis C5, complete genome. 46 3.7 1
(DV237994) A2FLE69TV Aedes aegypti full length cDNA library,... 32 9.1 2
(DV300019) NABPW83TF Aedes aegypti infected with Brugia Mala... 32 9.1 2
(DV245715) A2FMN06TV Aedes aegypti full length cDNA library,... 32 9.1 2
(DV238750) A2FLH28TO Aedes aegypti full length cDNA library,... 32 9.1 2
(DV238751) A2FLH28TV Aedes aegypti full length cDNA library,... 32 9.1 2
(DV245713) A2FMN06TO Aedes aegypti full length cDNA library,... 32 9.1 2
(DV352311) NABXE37TF Aedes aegypti infected with Plasmodium ... 32 9.1 2
(DV237992) A2FLE69TO Aedes aegypti full length cDNA library,... 32 9.1 2
(DV284078) NAAG584TF Aedes aegypti - Fat Bodies Normalized (... 32 9.2 2
(DV273445) NAAFZ58TR Aedes aegypti - Fat Bodies Normalized (... 32 9.2 2
>(BJ436721) Dictyostelium discoideum cDNA clone:ddv32e02, 3' end,
single read.
Length = 754
Score = 733 bits (370), Expect(3) = 0.0
Identities = 370/370 (100%)
Strand = Plus / Minus
Query: 661 tagtcattggtatcgtaatgtcatcaataatgttaatttggagatatggtagaagtaaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 tagtcattggtatcgtaatgtcatcaataatgttaatttggagatatggtagaagtaaaa 695
Query: 721 tgattaaagtaattcatgatagttcaccaccactttcaacaactcttcaacaagtggatc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tgattaaagtaattcatgatagttcaccaccactttcaacaactcttcaacaagtggatc 635
Query: 781 ttttaaacagagggtgatgccgccgttttcatgtcacattatgaagagaaaacaccattg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ttttaaacagagggtgatgccgccgttttcatgtcacattatgaagagaaaacaccattg 575
Query: 841 tcattagttaaattacaaccattccttactcatatgccatatccattattctttgtaaac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tcattagttaaattacaaccattccttactcatatgccatatccattattctttgtaaac 515
Query: 901 atttatcatttaccagtacctttcattaaagatgaacatcgtgtcgttgccaaagaatta 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 atttatcatttaccagtacctttcattaaagatgaacatcgtgtcgttgccaaagaatta 455
Query: 961 ataccagaaagaggtgtattccaaattagtattaactatggttatgctgaaatcattaat 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ataccagaaagaggtgtattccaaattagtattaactatggttatgctgaaatcattaat 395
Query: 1021 gtaccttggg 1030
||||||||||
Sbjct: 394 gtaccttggg 385
Score = 337 bits (170), Expect(3) = 0.0
Identities = 170/170 (100%)
Strand = Plus / Minus
Query: 1096 gccaccaccactcaagatcaagaaaaattggtaattccaacaactaaaaaagaaattgtt 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gccaccaccactcaagatcaagaaaaattggtaattccaacaactaaaaaagaaattgtt 260
Query: 1156 ggatatcattactctgaacaaaatgataccgaaggaaatgatgttgaacttgaagttgaa 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ggatatcattactctgaacaaaatgataccgaaggaaatgatgttgaacttgaagttgaa 200
Query: 1216 ggtgttccacatatcacttatttcttatctagattacgtgttaaatcttc 1265
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ggtgttccacatatcacttatttcttatctagattacgtgttaaatcttc 150
Score = 202 bits (102), Expect(3) = 0.0
Identities = 102/102 (100%)
Strand = Plus / Minus
Query: 1273 caattcatcttaaaacgtttatcgatttttatctatgatattcttcttcaaaacagtaga 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 caattcatcttaaaacgtttatcgatttttatctatgatattcttcttcaaaacagtaga 83
Query: 1333 tcagaagctcattattatggtattcatcatagttcaatgagg 1374
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 tcagaagctcattattatggtattcatcatagttcaatgagg 41
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,408,746,807
Number of extensions: 83850834
Number of successful extensions: 6525817
Number of sequences better than 10.0: 55
Length of query: 1431
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1407
Effective length of database: 97,308,875,965
Effective search space: 136913588482755
Effective search space used: 136913588482755
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 1 |
| Homology vs Protein |
Query= Contig-U11844-1 (Contig-U11844-1Q) /CSM_Contig/Contig-U11844-1Q.Seq.d
(1431 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AP010904_1583(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 119 4e-25
FP312977_15(FP312977|pid:none) uncultured bacterial clone mtbe21... 115 3e-24
CP001110_2564(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 112 4e-23
(Q2IPI8) RecName: Full=Probable potassium transport system prote... 112 4e-23
CP001131_1002(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 111 6e-23
CP001359_997(CP001359|pid:none) Anaeromyxobacter dehalogenans 2C... 111 6e-23
(A1BHB7) RecName: Full=Probable potassium transport system prote... 111 6e-23
(Q74AK4) RecName: Full=Probable potassium transport system prote... 111 7e-23
(Q5ZTN5) RecName: Full=Probable potassium transport system prote... 110 1e-22
(A6TG51) RecName: Full=Low affinity potassium transport system p... 110 2e-22
CP001097_1788(CP001097|pid:none) Chlorobium limicola DSM 245, co... 110 2e-22
(Q8KAT2) RecName: Full=Probable potassium transport system prote... 110 2e-22
(Q5NN77) RecName: Full=Probable potassium transport system prote... 109 2e-22
(A1JHR6) RecName: Full=Low affinity potassium transport system p... 109 2e-22
(A7FCN2) RecName: Full=Low affinity potassium transport system p... 109 2e-22
(Q1CC44) RecName: Full=Low affinity potassium transport system p... 109 2e-22
(A7H902) RecName: Full=Probable potassium transport system prote... 109 3e-22
CP001013_3495(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 109 3e-22
(A0LP92) RecName: Full=Probable potassium transport system prote... 109 3e-22
(Q60A92) RecName: Full=Probable potassium transport system prote... 109 3e-22
(A8ACQ3) RecName: Full=Low affinity potassium transport system p... 109 3e-22
CP000943_486(CP000943|pid:none) Methylobacterium sp. 4-46, compl... 109 3e-22
(Q1DFF8) RecName: Full=Probable potassium transport system prote... 109 3e-22
CP001099_1907(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 108 4e-22
(Q13X42) RecName: Full=Probable potassium transport system prote... 108 4e-22
(Q5X5Y0) RecName: Full=Probable potassium transport system prote... 108 4e-22
CP001025_1692(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 108 4e-22
CP001099_1908(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 108 4e-22
(A4WGE0) RecName: Full=Low affinity potassium transport system p... 108 5e-22
(Q5WUW3) RecName: Full=Probable potassium transport system prote... 108 5e-22
(Q5P3E3) RecName: Full=Probable potassium transport system prote... 108 5e-22
(Q4KHA4) RecName: Full=Probable potassium transport system prote... 108 5e-22
CP001052_2470(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 108 6e-22
(Q5ZW98) RecName: Full=Probable potassium transport system prote... 108 6e-22
(B0KTK9) RecName: Full=Probable potassium transport system prote... 108 6e-22
(A7MMV3) RecName: Full=Low affinity potassium transport system p... 108 6e-22
(Q2NQ98) RecName: Full=Low affinity potassium transport system p... 108 6e-22
(Q0BEY0) RecName: Full=Probable potassium transport system prote... 108 6e-22
(Q6DB92) RecName: Full=Low affinity potassium transport system p... 107 8e-22
(Q0SYU9) RecName: Full=Low affinity potassium transport system p... 107 8e-22
(B5RFU8) RecName: Full=Low affinity potassium transport system p... 107 8e-22
(B5YY05) RecName: Full=Low affinity potassium transport system p... 107 8e-22
(B7LK92) RecName: Full=Low affinity potassium transport system p... 107 8e-22
CP000876_7(CP000876|pid:none) Herpetosiphon aurantiacus ATCC 237... 107 8e-22
(Q47IT9) RecName: Full=Probable potassium transport system prote... 107 8e-22
(Q31UM6) RecName: Full=Low affinity potassium transport system p... 107 8e-22
D65178(D65178) kup protein - Escherichia coli (strain K-12) &L1... 107 8e-22
(Q3SH71) RecName: Full=Probable potassium transport system prote... 107 8e-22
(B1JD87) RecName: Full=Probable potassium transport system prote... 107 8e-22
AM747720_1866(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 107 8e-22
(Q3YVL0) RecName: Full=Low affinity potassium transport system p... 107 8e-22
(Q0TAW2) RecName: Full=Low affinity potassium transport system p... 107 8e-22
CP000826_4884(CP000826|pid:none) Serratia proteamaculans 568, co... 107 8e-22
(A4TSH8) RecName: Full=Low affinity potassium transport system p... 107 1e-21
CP000380_790(CP000380|pid:none) Burkholderia cenocepacia AU 1054... 107 1e-21
CP001074_934(CP001074|pid:none) Rhizobium etli CIAT 652, complet... 107 1e-21
(Q2KBW4) RecName: Full=Probable potassium transport system prote... 107 1e-21
(A4YN81) RecName: Full=Probable potassium transport system prote... 107 1e-21
(Q7P0J4) RecName: Full=Probable potassium transport system prote... 107 1e-21
(Q6MLL0) RecName: Full=Probable potassium transport system prote... 107 1e-21
(A0K7S3) RecName: Full=Probable potassium transport system prote... 107 1e-21
(Q3B1C1) RecName: Full=Probable potassium transport system prote... 107 1e-21
(Q98KL7) RecName: Full=Probable potassium transport system prote... 106 2e-21
(Q5X2E7) RecName: Full=Probable potassium transport system prote... 106 2e-21
(Q2K2I9) RecName: Full=Probable potassium transport system prote... 106 2e-21
AE017354_2337(AE017354|pid:none) Legionella pneumophila subsp. p... 106 2e-21
(Q88NK7) RecName: Full=Probable potassium transport system prote... 106 2e-21
(Q5ZSY2) RecName: Full=Probable potassium transport system prote... 106 2e-21
(Q3KH21) RecName: Full=Probable potassium transport system prote... 106 2e-21
(Q1I6D2) RecName: Full=Probable potassium transport system prote... 105 3e-21
(A0KL61) RecName: Full=Probable potassium transport system prote... 105 3e-21
(Q5WU69) RecName: Full=Probable potassium transport system prote... 105 3e-21
CP001032_3288(CP001032|pid:none) Opitutus terrae PB90-1, complet... 105 4e-21
(Q2YCL2) RecName: Full=Probable potassium transport system prote... 105 5e-21
(Q7WXK8) RecName: Full=Probable potassium transport system prote... 105 5e-21
CP000884_5977(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 104 7e-21
CP001298_2429(CP001298|pid:none) Methylobacterium chloromethanic... 104 7e-21
CP000908_2248(CP000908|pid:none) Methylobacterium extorquens PA1... 104 7e-21
(Q3BQF3) RecName: Full=Probable potassium transport system prote... 104 9e-21
CP001096_2180(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 104 9e-21
CP000628_842(CP000628|pid:none) Agrobacterium radiobacter K84 ch... 104 9e-21
(Q87Y19) RecName: Full=Probable potassium transport system prote... 104 9e-21
CP000086_2208(CP000086|pid:none) Burkholderia thailandensis E264... 104 9e-21
(Q6N893) RecName: Full=Probable potassium transport system prote... 104 9e-21
(Q48FA9) RecName: Full=Probable potassium transport system prote... 104 9e-21
(Q89NN6) RecName: Full=Probable potassium transport system prote... 103 1e-20
CU468135_6(CU468135|pid:none) Erwinia tasmaniensis strain ET1/99... 103 1e-20
CU695240_555(CU695240|pid:none) Ralstonia solanacearum strain Mo... 103 1e-20
(Q63US0) RecName: Full=Probable potassium transport system prote... 103 1e-20
(A3NA39) RecName: Full=Probable potassium transport system prote... 103 1e-20
(A5FUT7) RecName: Full=Probable potassium transport system prote... 103 1e-20
(Q4UXL9) RecName: Full=Probable potassium transport system prote... 103 1e-20
CP000548_1063(CP000548|pid:none) Burkholderia mallei NCTC 10247 ... 103 1e-20
(Q2YQM9) RecName: Full=Probable potassium transport system prote... 103 1e-20
CP000124_2313(CP000124|pid:none) Burkholderia pseudomallei 1710b... 103 1e-20
CP001408_2256(CP001408|pid:none) Burkholderia pseudomallei MSHR3... 103 1e-20
CP001488_1320(CP001488|pid:none) Brucella melitensis ATCC 23457 ... 103 1e-20
(A9M640) RecName: Full=Probable potassium transport system prote... 103 1e-20
(A1V4I6) RecName: Full=Probable potassium transport system prote... 103 1e-20
CU914166_1013(CU914166|pid:none) Ralstonia solanacearum strain I... 103 1e-20
(A5V804) RecName: Full=Probable potassium transport system prote... 103 1e-20
FP236842_6(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/96 c... 103 1e-20
CP000967_3164(CP000967|pid:none) Xanthomonas oryzae pv. oryzae P... 103 2e-20
CP001154_121(CP001154|pid:none) Laribacter hongkongensis HLHK9, ... 103 2e-20
CP000941_967(CP000941|pid:none) Xylella fastidiosa M12, complete... 103 2e-20
(Q92Y93) RecName: Full=Probable potassium transport system prote... 103 2e-20
(Q9ABT9) RecName: Full=Probable potassium transport system prote... 103 2e-20
CP001111_3119(CP001111|pid:none) Stenotrophomonas maltophilia R5... 103 2e-20
(A6WZX3) RecName: Full=Probable potassium transport system prote... 103 2e-20
CP000884_4004(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 103 2e-20
(A5EHG1) RecName: Full=Probable potassium transport system prote... 102 3e-20
CU468135_1220(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 102 3e-20
(Q47A46) RecName: Full=Probable potassium transport system prote... 102 3e-20
(Q135T0) RecName: Full=Probable potassium transport system prote... 102 3e-20
(Q2W905) RecName: Full=Probable potassium transport system prote... 102 3e-20
(Q472H9) RecName: Full=Probable potassium transport system prote... 102 3e-20
(Q8XR16) RecName: Full=Probable potassium transport system prote... 102 3e-20
CP001001_3879(CP001001|pid:none) Methylobacterium radiotolerans ... 102 3e-20
CP000927_3913(CP000927|pid:none) Caulobacter sp. K31, complete g... 102 3e-20
(Q0AIM8) RecName: Full=Probable potassium transport system prote... 102 3e-20
CP001013_3740(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 102 3e-20
(Q6F793) RecName: Full=Probable potassium transport system prote... 102 3e-20
(Q9PC78) RecName: Full=Probable potassium transport system prote... 102 3e-20
(A4YWY9) RecName: Full=Probable potassium transport system prote... 102 3e-20
(Q7NUG7) RecName: Full=Probable potassium transport system prote... 102 5e-20
CU459003_1673(CU459003|pid:none) Magnetospirillum gryphiswaldens... 102 5e-20
(Q87D01) RecName: Full=Probable potassium transport system prote... 102 5e-20
AM889285_2385(AM889285|pid:none) Gluconacetobacter diazotrophicu... 102 5e-20
CP001189_619(CP001189|pid:none) Gluconacetobacter diazotrophicus... 102 5e-20
(A1WHB4) RecName: Full=Probable potassium transport system prote... 101 6e-20
(Q1M651) RecName: Full=Probable potassium transport system prote... 101 6e-20
CP001197_978(CP001197|pid:none) Desulfovibrio vulgaris str. 'Miy... 101 6e-20
(A6UM20) RecName: Full=Probable potassium transport system prote... 101 6e-20
(Q2G870) RecName: Full=Probable potassium transport system prote... 101 6e-20
AP010904_4080(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 101 8e-20
CP000943_4789(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 101 8e-20
CP001001_5384(CP001001|pid:none) Methylobacterium radiotolerans ... 101 8e-20
(A2SC47) RecName: Full=Probable potassium transport system prote... 100 1e-19
CP000721_1236(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 100 1e-19
CP001029_1611(CP001029|pid:none) Methylobacterium populi BJ001, ... 100 1e-19
CP001349_5150(CP001349|pid:none) Methylobacterium nodulans ORS 2... 100 1e-19
CP001001_723(CP001001|pid:none) Methylobacterium radiotolerans J... 100 2e-19
(A6VA56) RecName: Full=Probable potassium transport system prote... 100 2e-19
CU694415_2(CU694415|pid:none) Ralstonia solanacearum strain MolK... 100 2e-19
(Q2IX43) RecName: Full=Probable potassium transport system prote... 100 2e-19
(A5EHG2) RecName: Full=Probable potassium transport system prote... 100 2e-19
(A3M9P9) RecName: Full=Probable potassium transport system prote... 100 2e-19
CU468230_3201(CU468230|pid:none) Acinetobacter baumannii str. SD... 100 2e-19
(Q02I77) RecName: Full=Probable potassium transport system prote... 100 2e-19
AK072472_1(AK072472|pid:none) Oryza sativa Japonica Group cDNA c... 99 3e-19
(Q92RN0) RecName: Full=Probable potassium transport system prote... 99 3e-19
CP000908_1566(CP000908|pid:none) Methylobacterium extorquens PA1... 99 3e-19
(Q07Q80) RecName: Full=Probable potassium transport system prote... 99 3e-19
CP001298_1770(CP001298|pid:none) Methylobacterium chloromethanic... 99 3e-19
CP001510_1378(CP001510|pid:none) Methylobacterium extorquens AM1... 99 3e-19
CP000781_185(CP000781|pid:none) Xanthobacter autotrophicus Py2, ... 99 3e-19
(Q6N5G6) RecName: Full=Probable potassium transport system prote... 99 4e-19
CP001096_3356(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 99 4e-19
(A8ILJ2) RecName: Full=Probable potassium transport system prote... 99 5e-19
CP001053_2637(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 99 5e-19
(Q136R8) RecName: Full=Probable potassium transport system prote... 99 5e-19
(Q035P5) RecName: Full=Probable potassium transport system prote... 99 5e-19
AJ427453_1(AJ427453|pid:none) Vicia faba mRNA for putative potas... 98 6e-19
(A6U6M1) RecName: Full=Probable potassium transport system prote... 98 6e-19
AM270011_22(AM270011|pid:none) Aspergillus niger contig An02c016... 98 6e-19
(Q89NN5) RecName: Full=Probable potassium transport system prote... 98 6e-19
(A4YWY8) RecName: Full=Probable potassium transport system prote... 98 6e-19
(Q1GSZ7) RecName: Full=Probable potassium transport system prote... 98 6e-19
AP007159_235(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 98 8e-19
(A1VTR7) RecName: Full=Probable potassium transport system prote... 98 8e-19
CP001074_2688(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 97 1e-18
DQ489736_758(DQ489736|pid:none) Leuconostoc citreum KM20, comple... 97 1e-18
CP001016_1244(CP001016|pid:none) Beijerinckia indica subsp. indi... 97 1e-18
(A6T3X6) RecName: Full=Probable potassium transport system prote... 97 1e-18
(Q837G9) RecName: Full=Probable potassium transport system prote... 97 1e-18
(Q0BPL2) RecName: Full=Probable potassium transport system prote... 97 1e-18
AE007915_10(AE007915|pid:none) Agrobacterium tumefaciens str. C5... 97 1e-18
(Q03XG1) RecName: Full=Probable potassium transport system prote... 97 2e-18
(Q8G7Q3) RecName: Full=Probable potassium transport system prote... 97 2e-18
(Q031B2) RecName: Full=Probable potassium transport system prote... 96 2e-18
CP001635_2470(CP001635|pid:none) Variovorax paradoxus S110 chrom... 96 2e-18
(Q9CHU5) RecName: Full=Probable potassium transport system prote... 96 2e-18
(Q6A5S0) RecName: Full=Probable potassium transport system prote... 96 2e-18
(Q5FQL0) RecName: Full=Probable potassium transport system prote... 96 3e-18
CP001389_436(CP001389|pid:none) Rhizobium sp. NGR234, complete g... 96 3e-18
(Q217M1) RecName: Full=Probable potassium transport system prote... 96 3e-18
CP001032_3103(CP001032|pid:none) Opitutus terrae PB90-1, complet... 96 3e-18
(Q1MEX2) RecName: Full=Probable potassium transport system prote... 96 3e-18
EU961396_1(EU961396|pid:none) Zea mays clone 235083 potassium tr... 96 3e-18
(Q0K2K6) RecName: Full=Probable potassium transport system prote... 96 3e-18
(P96790) RecName: Full=Putative potassium transport system prote... 96 3e-18
CP001280_2273(CP001280|pid:none) Methylocella silvestris BL2, co... 96 3e-18
DQ465924_1(DQ465924|pid:none) Hordeum vulgare potassium transpor... 96 4e-18
AP009256_1522(AP009256|pid:none) Bifidobacterium adolescentis AT... 96 4e-18
(A1A3M0) RecName: Full=Probable potassium transport system prote... 96 4e-18
(Q465T0) RecName: Full=Probable potassium transport system prote... 95 6e-18
(Q8TL61) RecName: Full=Probable potassium transport system prote... 95 6e-18
(Q88Z42) RecName: Full=Probable potassium transport system prote... 95 6e-18
AP008937_1119(AP008937|pid:none) Lactobacillus fermentum IFO 395... 95 6e-18
(Q48SQ3) RecName: Full=Probable potassium transport system prote... 95 7e-18
(Q99Z39) RecName: Full=Probable potassium transport system prote... 95 7e-18
(Q8P0C8) RecName: Full=Probable potassium transport system prote... 95 7e-18
(Q1J5X4) RecName: Full=Probable potassium transport system prote... 95 7e-18
(A2RDW5) RecName: Full=Probable potassium transport system prote... 95 7e-18
EU973361_1(EU973361|pid:none) Zea mays clone 397426 potassium tr... 95 7e-18
(Q216N0) RecName: Full=Probable potassium transport system prote... 95 7e-18
(B5XM58) RecName: Full=Probable potassium transport system prote... 95 7e-18
CP000721_2008(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 95 7e-18
CP001298_1150(CP001298|pid:none) Methylobacterium chloromethanic... 94 9e-18
CP001213_865(CP001213|pid:none) Bifidobacterium animalis subsp. ... 94 9e-18
AX026652_1(AX026652|pid:none) Sequence 9 from Patent WO0037646. 94 9e-18
CP000261_1221(CP000261|pid:none) Streptococcus pyogenes MGAS2096... 94 9e-18
(Q8K6Y2) RecName: Full=Probable potassium transport system prote... 94 9e-18
AM431927_2(AM431927|pid:none) Vitis vinifera contig VV78X003403.... 94 9e-18
AP008210_702(AP008210|pid:none) Oryza sativa (japonica cultivar-... 94 2e-17
(Q6VVA6) RecName: Full=Potassium transporter 1; AltName: Full=Os... 94 2e-17
BA000016_978(BA000016|pid:none) Clostridium perfringens str. 13 ... 93 2e-17
(A4SYW3) RecName: Full=Probable potassium transport system prote... 93 2e-17
(Q0TRQ9) RecName: Full=Probable potassium transport system prote... 93 2e-17
AL031394_2(AL031394|pid:none) Arabidopsis thaliana DNA chromosom... 93 2e-17
(Q2G8I5) RecName: Full=Probable potassium transport system prote... 93 2e-17
(Q0SIZ9) RecName: Full=Probable potassium transport system prote... 93 3e-17
(Q3K107) RecName: Full=Probable potassium transport system prote... 93 3e-17
(Q9CHU4) RecName: Full=Probable potassium transport system prote... 93 3e-17
(Q031B1) RecName: Full=Probable potassium transport system prote... 92 4e-17
(A2RIU1) RecName: Full=Probable potassium transport system prote... 92 4e-17
(Q942X8) RecName: Full=Probable potassium transporter 2; AltName... 92 4e-17
CP000517_490(CP000517|pid:none) Lactobacillus helveticus DPC 457... 92 5e-17
(Q5FLF5) RecName: Full=Probable potassium transport system prote... 92 5e-17
FB811063_1(FB811063|pid:none) Sequence 30336 from Patent WO20080... 92 5e-17
AM902716_2701(AM902716|pid:none) Bordetella petrii strain DSM 12... 92 5e-17
CP001154_1709(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 92 5e-17
(A5F0D8) RecName: Full=Probable potassium transport system prote... 92 6e-17
AM946015_1221(AM946015|pid:none) Streptococcus uberis 0140J comp... 92 6e-17
AL391712_20(AL391712|pid:none) Arabidopsis thaliana DNA chromoso... 92 6e-17
FM204883_635(FM204883|pid:none) Streptococcus equi subsp. equi 4... 92 6e-17
CP000820_4546(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 91 8e-17
(A4QC57) RecName: Full=Probable potassium transport system prote... 91 8e-17
CP001129_627(CP001129|pid:none) Streptococcus equi subsp. zooepi... 91 8e-17
(Q046Q7) RecName: Full=Probable potassium transport system prote... 91 8e-17
CU633438_615(CU633438|pid:none) Podospora anserina genomic DNA c... 91 1e-16
AJ009759_1(AJ009759|pid:none) Neurospora crassa hak-1 gene. &BX... 91 1e-16
AM436385_3(AM436385|pid:none) Vitis vinifera contig VV78X236551.... 91 1e-16
CP001338_1625(CP001338|pid:none) Candidatus Methanosphaerula pal... 91 1e-16
CP000780_1359(CP000780|pid:none) Candidatus Methanoregula boonei... 91 1e-16
(Q7VTK0) RecName: Full=Probable potassium transport system prote... 91 1e-16
(Q2FQC0) RecName: Full=Probable potassium transport system prote... 91 1e-16
AB055630_1(AB055630|pid:none) Phragmites australis n-PhaHAK1 mRN... 91 1e-16
(Q74LN2) RecName: Full=Probable potassium transport system prote... 91 1e-16
AB055629_1(AB055629|pid:none) Phragmites australis u-PhaHAK1 mRN... 91 1e-16
AB055631_1(AB055631|pid:none) Phragmites australis e-PhaHAK1A mR... 91 1e-16
BT034109_1(BT034109|pid:none) Zea mays full-length cDNA clone ZM... 90 2e-16
(A6GXA1) RecName: Full=Probable potassium transport system prote... 90 2e-16
(Q8H3P9) RecName: Full=Potassium transporter 7; AltName: Full=Os... 90 2e-16
AP004570_21(AP004570|pid:none) Oryza sativa Japonica Group genom... 90 2e-16
FB811047_1(FB811047|pid:none) Sequence 30320 from Patent WO20080... 90 2e-16
AP008213_1921(AP008213|pid:none) Oryza sativa (japonica cultivar... 90 2e-16
AF025292_1(AF025292|pid:none) Hordeum vulgare subsp. vulgare put... 90 2e-16
(Q1GBZ5) RecName: Full=Probable potassium transport system prote... 90 2e-16
FB900330_1(FB900330|pid:none) Sequence 119603 from Patent WO2008... 89 3e-16
(Q8DHB0) RecName: Full=Probable potassium transport system prote... 89 3e-16
AJ427984_1(AJ427984|pid:none) Oryza sativa HAK15 gene for putati... 89 3e-16
AJ297886_1(AJ297886|pid:none) Hordeum vulgare partial putative h... 89 3e-16
AJ297888_1(AJ297888|pid:none) Hordeum vulgare partial mRNA for p... 89 3e-16
(Q9SA05) RecName: Full=Putative potassium transporter 10; ... 89 4e-16
CP001229_928(CP001229|pid:none) Sulfurihydrogenibium azorense Az... 89 4e-16
AK111629_1(AK111629|pid:none) Oryza sativa Japonica Group cDNA c... 89 4e-16
AM889285_634(AM889285|pid:none) Gluconacetobacter diazotrophicus... 89 4e-16
AM423271_6(AM423271|pid:none) Vitis vinifera contig VV78X118542.... 89 5e-16
(O80739) RecName: Full=Putative potassium transporter 12; ... 89 5e-16
AB254448_1(AB254448|pid:none) Phragmites australis PhaHAK2-n mRN... 89 5e-16
AJ427292_1(AJ427292|pid:none) Cymodocea nodosa mRNA for putative... 89 5e-16
AM696205_1(AM696205|pid:none) Physcomitrella patens hak2 gene fo... 89 5e-16
FB900334_1(FB900334|pid:none) Sequence 119607 from Patent WO2008... 88 7e-16
(Q67UC7) RecName: Full=Probable potassium transporter 17; AltNam... 88 7e-16
FB900326_1(FB900326|pid:none) Sequence 119599 from Patent WO2008... 88 7e-16
AJ427975_1(AJ427975|pid:none) Oryza sativa HAK17 gene for putati... 88 7e-16
AM695751_1(AM695751|pid:none) Physcomitrella patens hak4 gene fo... 88 7e-16
AP005308_11(AP005308|pid:none) Oryza sativa Japonica Group genom... 88 7e-16
BT011758_1(BT011758|pid:none) Arabidopsis thaliana At4g19960 gen... 88 7e-16
(O49423) RecName: Full=Putative potassium transporter 9; ... 88 7e-16
(A5FAI5) RecName: Full=Probable potassium transport system prote... 88 7e-16
DQ489721_1(DQ489721|pid:none) Lycopersicon esculentum HAK5 mRNA,... 88 9e-16
(Q03S07) RecName: Full=Probable potassium transport system prote... 88 9e-16
AJ427293_1(AJ427293|pid:none) Cymodocea nodosa mRNA for putative... 87 1e-15
AL049608_16(AL049608|pid:none) Arabidopsis thaliana DNA chromoso... 87 1e-15
DQ841950_1(DQ841950|pid:none) Nicotiana tabacum putative high-af... 87 1e-15
AB256660_1(AB256660|pid:none) Phragmites australis PhaHAK3 mRNA ... 87 1e-15
(A5G9I7) RecName: Full=Probable potassium transport system prote... 87 1e-15
AF207621_1(AF207621|pid:none) Arabidopsis thaliana potassium tra... 87 1e-15
AB254447_1(AB254447|pid:none) Phragmites australis PhaHAK2-u mRN... 87 1e-15
(Q9LD18) RecName: Full=Potassium transporter 4; Short=A... 87 1e-15
(Q8VXB5) RecName: Full=Putative potassium transporter 8; AltName... 87 1e-15
(Q74AA5) RecName: Full=Probable potassium transport system prote... 87 2e-15
DQ465409_1(DQ465409|pid:none) Vitis vinifera KUP1 mRNA, complete... 87 2e-15
(O64769) RecName: Full=Potassium transporter 11; Short=... 87 2e-15
FB811089_1(FB811089|pid:none) Sequence 30362 from Patent WO20080... 86 3e-15
AC141106_9(AC141106|pid:none) Medicago truncatula clone mth2-33e... 86 3e-15
AL021637_6(AL021637|pid:none) Arabidopsis thaliana DNA chromosom... 86 3e-15
AB254449_1(AB254449|pid:none) Phragmites australis PhaHAK2-e mRN... 86 3e-15
BT055157_1(BT055157|pid:none) Zea mays full-length cDNA clone ZM... 86 3e-15
AB257219_1(AB257219|pid:none) Phragmites australis PhaHAK4 mRNA ... 86 3e-15
AB256659_1(AB256659|pid:none) Phragmites australis PhaHAK3 mRNA ... 86 3e-15
EF087366_1(EF087366|pid:none) Picea sitchensis clone WS02748_F20... 86 3e-15
AF367865_1(AF367865|pid:none) Mesembryanthemum crystallinum pota... 86 3e-15
EF101928_696(EF101928|pid:none) Acanthocystis turfacea Chlorella... 86 3e-15
DQ890022_110(DQ890022|pid:none) Paramecium bursaria Chlorella vi... 86 3e-15
(Q6YSA9) RecName: Full=Probable potassium transporter 4; AltName... 86 4e-15
(Q7XLC6) RecName: Full=Probable potassium transporter 11; AltNam... 86 4e-15
AM286415_7(AM286415|pid:none) Yersinia enterocolitica subsp. ent... 86 4e-15
(Q11PK1) RecName: Full=Probable potassium transport system prote... 86 4e-15
AM696206_1(AM696206|pid:none) Physcomitrella patens hak3 gene fo... 86 4e-15
(Q69RI8) RecName: Full=Probable potassium transporter 14; AltNam... 86 4e-15
AF012658_1(AF012658|pid:none) Arabidopsis thaliana putative pota... 86 4e-15
FB811053_1(FB811053|pid:none) Sequence 30326 from Patent WO20080... 85 6e-15
CR382129_397(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 85 7e-15
FB811181_1(FB811181|pid:none) Sequence 30454 from Patent WO20080... 84 1e-14
AY887893_1(AY887893|pid:none) Phytolacca acinosa putative potass... 84 1e-14
AJ427982_1(AJ427982|pid:none) Oryza sativa partial HAK13 gene fo... 84 1e-14
AF367864_1(AF367864|pid:none) Mesembryanthemum crystallinum puta... 84 1e-14
FB900338_1(FB900338|pid:none) Sequence 119611 from Patent WO2008... 84 1e-14
AY919346_1(AY919346|pid:none) Phytolacca acinosa putative high-a... 84 1e-14
AF129479_1(AF129479|pid:none) Hordeum vulgare subsp. vulgare cul... 84 1e-14
AM434085_1(AM434085|pid:none) Vitis vinifera contig VV78X045913.... 84 2e-14
CP001089_3189(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 84 2e-14
EU296578_1(EU296578|pid:none) Pseudomonas syringae pv. maculicol... 84 2e-14
AC152057_20(AC152057|pid:none) Medicago truncatula clone mth2-25... 84 2e-14
FB811061_1(FB811061|pid:none) Sequence 30334 from Patent WO20080... 83 3e-14
AP003272_5(AP003272|pid:none) Oryza sativa Japonica Group genomi... 83 3e-14
AP008207_3556(AP008207|pid:none) Oryza sativa (japonica cultivar... 83 3e-14
(A1ALM1) RecName: Full=Probable potassium transport system prote... 82 4e-14
FB811055_1(FB811055|pid:none) Sequence 30328 from Patent WO20080... 82 5e-14
(Q8W4I4) RecName: Full=Potassium transporter 6; Short=A... 81 1e-13
AL035394_11(AL035394|pid:none) Arabidopsis thaliana DNA chromoso... 81 1e-13
AP003281_26(AP003281|pid:none) Oryza sativa Japonica Group genom... 81 1e-13
AC011806_20(AC011806|pid:none) Genomic Sequence For Oryza sativa... 81 1e-13
AC003671_17(AC003671|pid:none) Arabidopsis thaliana chromosome 1... 80 1e-13
FB900344_1(FB900344|pid:none) Sequence 119617 from Patent WO2008... 80 2e-13
CP001124_3610(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 80 2e-13
AM696204_1(AM696204|pid:none) Physcomitrella patens hak1 gene fo... 80 2e-13
CP001089_3192(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 80 2e-13
CP001390_2952(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 79 3e-13
G84830(G84830)probable potassium transporter [imported] - Arabid... 79 3e-13
CP000739_2(CP000739|pid:none) Sinorhizobium medicae WSM419 plasm... 78 7e-13
CR382131_472(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 77 2e-12
CP000908_1097(CP000908|pid:none) Methylobacterium extorquens PA1... 75 6e-12
(Q67VS5) RecName: Full=Potassium transporter 10; AltName: Full=O... 74 1e-11
AY879592_1(AY879592|pid:none) Phytolacca acinosa putative potass... 74 1e-11
DQ914819_1(DQ914819|pid:none) Debaryomyces hansenii strain CBS 7... 72 5e-11
AP005869_20(AP005869|pid:none) Oryza sativa Japonica Group genom... 70 2e-10
AL731610_23(AL731610|pid:none) Oryza sativa genomic DNA, chromos... 70 2e-10
FB900328_1(FB900328|pid:none) Sequence 119601 from Patent WO2008... 69 4e-10
AC146468_11(AC146468|pid:none) Oryza sativa (japonica cultivar-g... 69 6e-10
CP000496_996(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 67 1e-09
FM992688_612(FM992688|pid:none) Candida dubliniensis CD36 chromo... 58 7e-07
CP001019_967(CP001019|pid:none) Coxiella burnetii CbuG_Q212, com... 50 2e-04
EU296563_1(EU296563|pid:none) Pseudomonas syringae pv. tomato st... 49 3e-04
AJ300161_1(AJ300161|pid:none) Hordeum vulgare partial hak4 gene ... 40 0.27
AK071411_1(AK071411|pid:none) Oryza sativa Japonica Group cDNA c... 39 0.36
AJ427977_1(AJ427977|pid:none) Oryza sativa partial HAK8 gene for... 38 0.80
DQ307289_1(DQ307289|pid:none) Pseudomonas fluorescens strain TDK... 37 1.8
CP000414_924(CP000414|pid:none) Leuconostoc mesenteroides subsp.... 37 2.3
(Q8CXB4) RecName: Full=UvrABC system protein C; Short=P... 37 2.3
AF129483_1(AF129483|pid:none) Arabidopsis thaliana cultivar Colu... 36 4.0
AF129480_1(AF129480|pid:none) Hordeum vulgare subsp. vulgare cul... 35 5.2
AC084282_23(AC084282|pid:none) Oryza sativa chromosome 3 BAC OSJ... 35 5.2
AF129482_1(AF129482|pid:none) Arabidopsis thaliana cultivar Colu... 35 5.2
AF079445_1(AF079445|pid:none) Dictyostelium discoideum TipC (tip... 35 5.2
FP236842_423(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/96... 35 6.8
AE014187_224(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 35 6.8
AB256661_1(AB256661|pid:none) Phragmites australis PhaHAK3 mRNA ... 35 8.8
(Q9LUJ4) RecName: Full=Pentatricopeptide repeat-containing prote... 35 8.8
>AP010904_1583(AP010904|pid:none) Desulfovibrio magneticus RS-1 DNA,
complete genome.
Length = 635
Score = 119 bits (297), Expect = 4e-25
Identities = 59/119 (49%), Positives = 80/119 (67%), Gaps = 5/119 (4%)
Frame = +2
Query: 296 TFYLSITAIGCIFGDIGTSPLYVYASMFKGPPG----EKEVIGSLSLILWALIMVVTVKY 463
T L++ A+G +FGDIGTSPLY F G ++G LSLI W+L MV+TVKY
Sbjct: 20 TAALTLAALGVVFGDIGTSPLYAIKECFHGIHAIAVTPDNILGVLSLIFWSLTMVITVKY 79
Query: 464 VVFILNADNNGEGGIIALVSLIPKQTNQK-LKSALTILALCGSSFILGDGVITPAVSLL 637
V+FI ADN GEGGI AL+ L+PK + +++ L L LCG++ + GDG+ITPA+S+L
Sbjct: 80 VLFITAADNRGEGGIFALIELLPKDAGHRHVRTVLAFLGLCGAALLYGDGIITPAISVL 138
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,177,105,288
Number of extensions: 43287192
Number of successful extensions: 95082
Number of sequences better than 10.0: 372
Number of HSP's gapped: 94499
Number of HSP's successfully gapped: 497
Length of query: 477
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 345
Effective length of database: 623,955,076
Effective search space: 215264501220
Effective search space used: 215264501220
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
20 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
1 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |