Contig-U11841-1
Contig ID Contig-U11841-1
Contig update 2002.12.18
Contig sequence
>Contig-U11841-1 (Contig-U11841-1Q) /CSM_Contig/Contig-U11841-1Q.Seq.d
TTAATTAATTCAATTAAACCAAAAACAATTAATGAAACAACATTAAAATT
AAATTCAGATAAATTAAATATTTTTGAAAAGAATGTAAATTTAGAAAATT
GTTTAAAAGGTGCAAAAAAGATTGGAATTCAATTGACAAATATTGGTGCA
GGTGATATTCAAGAGGGAAAGAGACATTTAATTCTATCTATTCTATGGCA
ATTGGTAAAGATTGATTTAATGAATAAAGTTAGTAAATTGGCATATCGTG
TAAAGGCAGAGATGTTAGATTTAGGAGAGACTGAAAAGATTGAAGAATTG
GTAGCAGATGAGATTCTATTACGTTGGGTTAATCATCATTTANCTGAAGC
AGGTATTGATCGTCGTATAAGTAATTTCTCAAGTGATATTAAAGATTGTG
TAGTTTACATTCAATTATTTCATCAATTATCACCATCAATTTGTGGATTG
GAACTTTTGAATGAGAAGGATTTGAATGAGCNNNNNNNNN----------
AGTTAAATATTGATCAAGAAGCAATTTCAAAATTGGATTCAGAGATTCAA
CGTTACCAAAATCGTCATTTTGAATCGATTGAAGTTTATGAAGAGATTAA
AAAAAGAATTGAAATTAATAAACAACAAGACATTCAATTCGAGGAGATAA
ACAAATGAAAAGATTGAAATCATTGAAAAAGAATTTCAACAGCAAAAGAC
TGAATATGAAATTCAAATTCAACAATTGGAACAACAATTACAAGAGATTC
AAGAATCAGCGGGTCCAACTGAATCTCAATTAATTGAACAATTGGAACAA
GAGAAACAAGAGATTCAAAAATTAGAACAAGAAATTTCTACAAGCCTTGA
AAATGAATATAATGAAATTAAATCAATCTCTGAACAAAATCAAAGGGAAT
TGGAGCAATTGAAATTAAATACCTCTACAAATGAAAATGAATTAAAATTA
GTAAAAGAGAAATTAGATCAAGAGAAGCAAGAAATATTGAATAAATTAGA
ATCTACAGGTTTACTTGAAACTAAAAGACAATTGGAGAAAGTGAAACAAC
AAGCAATTGAAATTGAATCACAAATTGTAACATTAAAACAAAGTGAAAAA
CAATTAAAAGTTGATTTAACTGAAACCAAAGAAGATAAACATCGTATTTC
AATGGCAAAGAAAAAGATTCAAGATGAATTAGTTCGTGCAAAAGATAATA
CAGAGAAAATGATTAAAAATAAAGTTGAAACAGAGAGAATAATTGATAAA
ACCACTAAACAAGTCAGAGATTTACGTCATGAAATTGATAGAATTCAAAA
TGATAAGGTTTATACTCGACAACAAACAGAGGTAATTAAAATTGAAACTA
TTGAAGTTCAAGAGGAATTAGAACAAACTATCATTCAAAAGAAGAGATTA
ACCACAAAGAAACAAGAAACTTCTCAAATTTTAATGGAAAAAGAAATGGA
ATTGGATGAGGTACTAGTTCAAAAAGAAATTAAACTCAGTGATACAAAAC
AAAAGAATCGTGAAACCATTGAAAAAATGAAACGTGATTTTGAGAACAAC
TAAAAAAGAGTATTGAATATGAAAAAGAGAAAATTAAAACTCAAGTTATT
GAATCTGAAAATCGATTATTAAAACAACAAATTCAAACTGAAAATGAAAA
AAGAGAAAAAGAATTAATGGAAATAAAAAATAAAGATCTTAAATTGGATA
TTCATTTCGCTGCAATTCAAAAAGAACAAACTGAAAAAGAATCTGAAAGA
ATTAAAAAGGAACAATCAAAAACCAATCAATTACTATCACAAGAGAAAGA
AATCAATCATTTATTACAATCTAAAAATACTGAACTCTATAAAGAGAAAT
CATTATTACGTGAAAAAACTTCACAAGCTATGGCTGAAGCTCACCAAGCT
TTAAAAGATAATAAACTATTGGAAGATCAAATTTCAAAAACCAATTTAGA
GGTTGATGATACATTAATTAATAAACAAAAGTTAGAATTACTATCGATTG
AAGATTCAGCAGAGGTTGAAATGAAGAAAGCAGAGGTTAAAGATGAGAAA
AAGCGTTTAAAGAAATTAAAACAATTAAAACAACAAGAAGAAAAAGAGTT
ATTGGAAAAAGTTGAACAAGGACTCTCTAAAGATTTACATAAAGTTAAAG
CACAACAAGAGTTATGGAAAAAGAAATTCAAGATAAAGCATACGCATNCG
AAGATTTAGA

Gap gap included
Contig length 2200
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 1137018
End point 1134826
Strand (PLUS/MINUS) MINUS
Number of clones 5
Number of EST 6
Link to clone list U11841
List of clone(s)

est1=CHM275F,1,481
est2=CFC575Z,482,1202
est3=SHB661F,879,1384
est4=SFH687Z,1213,1581
est5=SHD292Z,1408,2193
est6=CHM275Z,1415,2146
Translated Amino Acid sequence
LINSIKPKTINETTLKLNSDKLNIFEKNVNLENCLKGAKKIGIQLTNIGAGDIQEGKRHL
ILSILWQLVKIDLMNKVSKLAYRVKAEMLDLGETEKIEELVADEILLRWVNHHLXEAGID
RRISNFSSDIKDCVVYIQLFHQLSPSICGLELLNEKDLNEXXX---

---LNIDQEAISKLDSEIQRYQNRHFESIEVYEEIKKRIEINKQQDIQFEEINK*kd*nh
*kristakd*i*nsnstigttitrdsrisgsn*isin*tigtretrdskirtrnfykp*k
*i**n*inl*tkskgigaieikylyk*k*ikiskreirsrearnie*iriyrft*n*kti
gesettsn*n*itncniktk*ktiks*fn*nqrr*tsyfngkekdsr*issckr*yrend
*k*s*nrenn**nh*tsqrfts*n**nsk**glysttnrgn*n*ny*ssrgirtnyhske
einhketrnfsnfngkrngig*gtsskrn*tq*yktkes*nh*knet*f*eqlkksieye
kekiktqviesenrllkqqiqtenekrekelmeiknkdlkldihfaaiqkeqtekeseri
kkeqsktnqllsqekeinhllqskntelykeksllrektsqamaeahqalkdnklledqi
sktnlevddtlinkqklellsiedsaevemkkaevkdekkrlkklkqlkqqeekellekv
eqglskdlhkvkaqqelwkkkfkikhthxki*


Translated Amino Acid sequence (All Frames)
Frame A:
LINSIKPKTINETTLKLNSDKLNIFEKNVNLENCLKGAKKIGIQLTNIGAGDIQEGKRHL
ILSILWQLVKIDLMNKVSKLAYRVKAEMLDLGETEKIEELVADEILLRWVNHHLXEAGID
RRISNFSSDIKDCVVYIQLFHQLSPSICGLELLNEKDLNEXXX---

---s*ilikkqfqnwiqrfnvtkivilnrlkfmkrlkkelklinnktfnsrr*tnekiei
iekefqqqkteyeiqiqqleqqlqeiqesagptesqlieqleqekqeiqkleqeistsle
neyneiksiseqnqreleqlklntstnenelklvkekldqekqeilnklestglletkrq
lekvkqqaieiesqivtlkqsekqlkvdltetkedkhrismakkkiqdelvrakdntekm
iknkveteriidkttkqvrdlrheidriqndkvytrqqtevikietievqeeleqtiiqk
krlttkkqetsqilmekemeldevlvqkeiklsdtkqknretiekmkrdfenn*krvlnm
kkrklklkllnlkidy*nnkfklkmkkekkn*wk*kikilnwifislqfkknklkknlke
lkrnnqkpinyyhkrkksiiyynlkilnsikrnhyyvkklhklwlkltkl*kiinywkik
fqkpi*rlmih*links*nyyrlkiqqrlk*rkqrlkmrksv*rn*nn*nnkkkksywkk
lnkdslkiyiklkhnksygkrnsr*sirxrrfr

Frame B:
*liqlnqkqlmkqh*n*iqin*iflkrm*i*kiv*kvqkrlefn*qilvqvifkrerdi*
fylfygnw*rli**iklvnwhiv*rqrc*i*erlkrlknw*qmrfyyvgliiixlkqvli
vv*visqvilkiv*ftfnyfinyhhqfvdwnf*mrri*msxxx---

---vky*srsnfkigfrdstlpkssf*id*sl*rd*kkn*n**ttrhsirgdkqmkrlks
lkknfnskrlnmkfkfnnwnnnykrfknqrvqlnln*lnnwnkrnkrfkn*nkkflqalk
mnimklnqslnkikgnwsn*n*iplqmkmn*n**krn*ikrskky*in*nlqvylklkdn
wrk*nnkqlklnhkl*h*nkvknn*kli*lkpkkinivfqwqrkrfkmn*fvqkiiqrk*
lkiklkqre*likplnkseiyvmkliefkmirfildnkqr*lklkllkfkrn*nklsfkr
rd*pqrnkkllkf*wkkkwnwmry*fkkklnsviqnkrivkplkk*nvilrttkkey*i*
kren*nssy*i*ksiikttnsn*k*kkrkringnkk*rs*igysfrcnskrtn*kri*kn
*kgtiknqsititrernqsfiti*ky*tl*reiiit*knftsyg*sspsfkr**tigrsn
fknqfrg**yin**tkvritid*rfsrg*neesrg*r*ekafkeiktikttrrkrvigks
*trtl*rft*s*sttrvmekeiqdkayaxedl

Frame C:
n*fn*tknn**nnikikfr*ikyf*keckfrklfkrckkdwnsidkywcr*ysrgketfn
siysmaigkd*fne*s**igisckgrdvrfrrd*kd*rigsr*dsitlg*ssfx*sry*s
syk*flk*y*rlcslhsiissiitinlwigtfe*egfe*axx---

---LNIDQEAISKLDSEIQRYQNRHFESIEVYEEIKKRIEINKQQDIQFEEINK*kd*nh
*kristakd*i*nsnstigttitrdsrisgsn*isin*tigtretrdskirtrnfykp*k
*i**n*inl*tkskgigaieikylyk*k*ikiskreirsrearnie*iriyrft*n*kti
gesettsn*n*itncniktk*ktiks*fn*nqrr*tsyfngkekdsr*issckr*yrend
*k*s*nrenn**nh*tsqrfts*n**nsk**glysttnrgn*n*ny*ssrgirtnyhske
einhketrnfsnfngkrngig*gtsskrn*tq*yktkes*nh*knet*f*eqlkksieye
kekiktqviesenrllkqqiqtenekrekelmeiknkdlkldihfaaiqkeqtekeseri
kkeqsktnqllsqekeinhllqskntelykeksllrektsqamaeahqalkdnklledqi
sktnlevddtlinkqklellsiedsaevemkkaevkdekkrlkklkqlkqqeekellekv
eqglskdlhkvkaqqelwkkkfkikhthxki*

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11841-1 (Contig-U11841-1Q)
/CSM_Contig/Contig-U11841-1Q.Seq.d
(2210 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11841-1 (Contig-U11841-1Q) /CSM_Contig/Conti... 1877 0.0
Contig-U12025-1 (Contig-U12025-1Q) /CSM_Contig/Conti... 40 0.010
Contig-U11683-1 (Contig-U11683-1Q) /CSM_Contig/Conti... 40 0.010
Contig-U12567-1 (Contig-U12567-1Q) /CSM_Contig/Conti... 38 0.040
Contig-U11746-1 (Contig-U11746-1Q) /CSM_Contig/Conti... 38 0.040
Contig-U11513-1 (Contig-U11513-1Q) /CSM_Contig/Conti... 38 0.040
Contig-U10395-1 (Contig-U10395-1Q) /CSM_Contig/Conti... 38 0.040
Contig-U06917-1 (Contig-U06917-1Q) /CSM_Contig/Conti... 38 0.040
Contig-U05103-1 (Contig-U05103-1Q) /CSM_Contig/Conti... 38 0.040
Contig-U14711-1 (Contig-U14711-1Q) /CSM_Contig/Conti... 36 0.16

>Contig-U11841-1 (Contig-U11841-1Q) /CSM_Contig/Contig-U11841-1Q.Seq.d
Length = 2210

Score = 1877 bits (947), Expect = 0.0
Identities = 961/968 (99%)
Strand = Plus / Plus


Query: 501 agttaaatattgatcaagaagcaatttcaaaattggattcagagattcaacgttaccaaa 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agttaaatattgatcaagaagcaatttcaaaattggattcagagattcaacgttaccaaa 560


Query: 561 atcgtcattttgaatcgattgaagtttatgaagagattnnnnnnngaattgaaattaata 620
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 561 atcgtcattttgaatcgattgaagtttatgaagagattaaaaaaagaattgaaattaata 620


Query: 621 aacaacaagacattcaattcgaggagataaacaaatgaaaagattgaaatcattgaaaaa 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aacaacaagacattcaattcgaggagataaacaaatgaaaagattgaaatcattgaaaaa 680


Query: 681 gaatttcaacagcaaaagactgaatatgaaattcaaattcaacaattggaacaacaatta 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaatttcaacagcaaaagactgaatatgaaattcaaattcaacaattggaacaacaatta 740


Query: 741 caagagattcaagaatcagcgggtccaactgaatctcaattaattgaacaattggaacaa 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caagagattcaagaatcagcgggtccaactgaatctcaattaattgaacaattggaacaa 800


Query: 801 gagaaacaagagattcaaaaattagaacaagaaatttctacaagccttgaaaatgaatat 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gagaaacaagagattcaaaaattagaacaagaaatttctacaagccttgaaaatgaatat 860


Query: 861 aatgaaattaaatcaatctctgaacaaaatcaaagggaattggagcaattgaaattaaat 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 aatgaaattaaatcaatctctgaacaaaatcaaagggaattggagcaattgaaattaaat 920


Query: 921 acctctacaaatgaaaatgaattaaaattagtaaaagagaaattagatcaagagaagcaa 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 acctctacaaatgaaaatgaattaaaattagtaaaagagaaattagatcaagagaagcaa 980


Query: 981 gaaatattgaataaattagaatctacaggtttacttgaaactaaaagacaattggagaaa 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 gaaatattgaataaattagaatctacaggtttacttgaaactaaaagacaattggagaaa 1040


Query: 1041 gtgaaacaacaagcaattgaaattgaatcacaaattgtaacattaaaacaaagtgaaaaa 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 gtgaaacaacaagcaattgaaattgaatcacaaattgtaacattaaaacaaagtgaaaaa 1100


Query: 1101 caattaaaagttgatttaactgaaaccaaagaagataaacatcgtatttcaatggcaaag 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1101 caattaaaagttgatttaactgaaaccaaagaagataaacatcgtatttcaatggcaaag 1160


Query: 1161 aaaaagattcaagatgaattagttcgtgcaaaagataatacagagaaaatgattaaaaat 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1161 aaaaagattcaagatgaattagttcgtgcaaaagataatacagagaaaatgattaaaaat 1220


Query: 1221 aaagttgaaacagagagaataattgataaaaccactaaacaagtcagagatttacgtcat 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1221 aaagttgaaacagagagaataattgataaaaccactaaacaagtcagagatttacgtcat 1280


Query: 1281 gaaattgatagaattcaaaatgataaggtttatactcgacaacaaacagaggtaattaaa 1340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1281 gaaattgatagaattcaaaatgataaggtttatactcgacaacaaacagaggtaattaaa 1340


Query: 1341 attgaaactattgaagttcaagaggaattagaacaaactatcattcaaaagaagagatta 1400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1341 attgaaactattgaagttcaagaggaattagaacaaactatcattcaaaagaagagatta 1400


Query: 1401 accacaaagaaacaagaaacttctcaaattttaatggaaaaagaaatggaattggatgag 1460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1401 accacaaagaaacaagaaacttctcaaattttaatggaaaaagaaatggaattggatgag 1460


Query: 1461 gtactagt 1468
||||||||
Sbjct: 1461 gtactagt 1468


Score = 839 bits (423), Expect = 0.0
Identities = 426/426 (100%)
Strand = Plus / Plus


Query: 56 cagataaattaaatatttttgaaaagaatgtaaatttagaaaattgtttaaaaggtgcaa 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 cagataaattaaatatttttgaaaagaatgtaaatttagaaaattgtttaaaaggtgcaa 115


Query: 116 aaaagattggaattcaattgacaaatattggtgcaggtgatattcaagagggaaagagac 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 aaaagattggaattcaattgacaaatattggtgcaggtgatattcaagagggaaagagac 175


Query: 176 atttaattctatctattctatggcaattggtaaagattgatttaatgaataaagttagta 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 atttaattctatctattctatggcaattggtaaagattgatttaatgaataaagttagta 235


Query: 236 aattggcatatcgtgtaaaggcagagatgttagatttaggagagactgaaaagattgaag 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 aattggcatatcgtgtaaaggcagagatgttagatttaggagagactgaaaagattgaag 295


Query: 296 aattggtagcagatgagattctattacgttgggttaatcatcatttanctgaagcaggta 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 aattggtagcagatgagattctattacgttgggttaatcatcatttanctgaagcaggta 355


Query: 356 ttgatcgtcgtataagtaatttctcaagtgatattaaagattgtgtagtttacattcaat 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ttgatcgtcgtataagtaatttctcaagtgatattaaagattgtgtagtttacattcaat 415


Query: 416 tatttcatcaattatcaccatcaatttgtggattggaacttttgaatgagaaggatttga 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tatttcatcaattatcaccatcaatttgtggattggaacttttgaatgagaaggatttga 475


Query: 476 atgagc 481
||||||
Sbjct: 476 atgagc 481


Score = 716 bits (361), Expect = 0.0
Identities = 361/361 (100%)
Strand = Plus / Plus


Query: 1685 gatcttaaattggatattcatttcgctgcaattcaaaaagaacaaactgaaaaagaatct 1744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1685 gatcttaaattggatattcatttcgctgcaattcaaaaagaacaaactgaaaaagaatct 1744


Query: 1745 gaaagaattaaaaaggaacaatcaaaaaccaatcaattactatcacaagagaaagaaatc 1804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1745 gaaagaattaaaaaggaacaatcaaaaaccaatcaattactatcacaagagaaagaaatc 1804


Query: 1805 aatcatttattacaatctaaaaatactgaactctataaagagaaatcattattacgtgaa 1864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1805 aatcatttattacaatctaaaaatactgaactctataaagagaaatcattattacgtgaa 1864


Query: 1865 aaaacttcacaagctatggctgaagctcaccaagctttaaaagataataaactattggaa 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1865 aaaacttcacaagctatggctgaagctcaccaagctttaaaagataataaactattggaa 1924


Query: 1925 gatcaaatttcaaaaaccaatttagaggttgatgatacattaattaataaacaaaagtta 1984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1925 gatcaaatttcaaaaaccaatttagaggttgatgatacattaattaataaacaaaagtta 1984


Query: 1985 gaattactatcgattgaagattcagcagaggttgaaatgaagaaagcagaggttaaagat 2044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1985 gaattactatcgattgaagattcagcagaggttgaaatgaagaaagcagaggttaaagat 2044


Query: 2045 g 2045
|
Sbjct: 2045 g 2045


Score = 218 bits (110), Expect = 2e-56
Identities = 113/113 (100%)
Strand = Plus / Plus


Query: 2098 gttattggaaaaagttgaacaaggactctctaaagatttacataaagttaaagcacaaca 2157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2098 gttattggaaaaagttgaacaaggactctctaaagatttacataaagttaaagcacaaca 2157


Query: 2158 agagttatggaaaaagaaattcaagataaagcatacgcatncgaagatttaga 2210
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2158 agagttatggaaaaagaaattcaagataaagcatacgcatncgaagatttaga 2210


Score = 129 bits (65), Expect = 1e-29
Identities = 65/65 (100%)
Strand = Plus / Plus


Query: 1533 cgtgattttgagaacaactaaaaaagagtattgaatatgaaaaagagaaaattaaaactc 1592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1533 cgtgattttgagaacaactaaaaaagagtattgaatatgaaaaagagaaaattaaaactc 1592


Query: 1593 aagtt 1597
|||||
Sbjct: 1593 aagtt 1597


>Contig-U12025-1 (Contig-U12025-1Q) /CSM_Contig/Contig-U12025-1Q.Seq.d
Length = 1366

Score = 40.1 bits (20), Expect = 0.010
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 1719 aaaaagaacaaactgaaaaa 1738
||||||||||||||||||||
Sbjct: 590 aaaaagaacaaactgaaaaa 609


Score = 30.2 bits (15), Expect = 9.7
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1431 ttaatggaaaaagaa 1445
|||||||||||||||
Sbjct: 583 ttaatggaaaaagaa 597


>Contig-U11683-1 (Contig-U11683-1Q) /CSM_Contig/Contig-U11683-1Q.Seq.d
Length = 1180

Score = 40.1 bits (20), Expect = 0.010
Identities = 23/24 (95%)
Strand = Plus / Plus


Query: 720 caacaattggaacaacaattacaa 743
||||||||| ||||||||||||||
Sbjct: 715 caacaattgcaacaacaattacaa 738


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 39,396
Number of Sequences: 6905
Number of extensions: 39396
Number of successful extensions: 4861
Number of sequences better than 10.0: 565
length of query: 2210
length of database: 5,674,871
effective HSP length: 16
effective length of query: 2194
effective length of database: 5,564,391
effective search space: 12208273854
effective search space used: 12208273854
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.27
Homology vs DNA
Query= Contig-U11841-1 (Contig-U11841-1Q) /CSM_Contig/Contig-U11841-1Q.Seq.d
(2210 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ374160) Dictyostelium discoideum cDNA clone:ddc6e19, 3' e... 1084 0.0 4
(BJ392421) Dictyostelium discoideum cDNA clone:dds27i16, 5' ... 852 0.0 2
(BJ405175) Dictyostelium discoideum cDNA clone:dds30g24, 3' ... 505 0.0 5
(BJ368451) Dictyostelium discoideum cDNA clone:ddc46e20, 5' ... 712 0.0 1
(BJ402434) Dictyostelium discoideum cDNA clone:dds16m22, 3' ... 379 e-101 2
(BJ383074) Dictyostelium discoideum cDNA clone:ddc46e20, 3' ... 170 2e-64 4
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 36 2e-04 22
(AM285308) Spiroplasma citri GII3-3X chromosome, contig Cont... 46 0.002 5
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 54 0.023 1
(AY328534) Vagococcus fluvialis GroES (groES) gene, complete... 54 0.023 1
(EJ471028) 1095403410885 Global-Ocean-Sampling_GS-28-01-01-1... 46 0.059 2
(CR548612) Paramecium tetraurelia macronuclear largest chrom... 42 0.059 24
(AF057019) Dictyostelium discoideum interaptin (abpD) gene, ... 34 0.091 6
(BX538353) Cryptosporidium parvum chromosome 6, complete seq... 36 0.11 13
(CU749106) A BAC library has been constructed from PN40024 g... 40 0.13 3
(BM169716) EST572239 PyBS Plasmodium yoelii yoelii cDNA clon... 44 0.15 2
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 34 0.17 20
(AE017308) Mycoplasma mobile 163K complete genome. 38 0.17 20
(ET876919) CHO_OF422xa24f1.ab1 CHO_OF Nicotiana tabacum geno... 44 0.17 2
(EJ615581) 1092963015295 Global-Ocean-Sampling_GS-29-01-01-1... 46 0.20 2
(AM422018) Candidatus Phytoplasma australiense complete genome. 36 0.20 19
(EJ053805) 1095456015109 Global-Ocean-Sampling_GS-26-01-01-1... 46 0.20 2
(CR354389) Zebrafish DNA sequence from clone CH211-220J14 in... 38 0.23 8
(AE006822) Sulfolobus solfataricus P2 section 181 of 272 of ... 38 0.30 4
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 40 0.36 15
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 36 0.36 11
(DQ396875) Scenedesmus obliquus strain UTEX 393 chloroplast,... 40 0.41 11
(AC046163) Homo sapiens chromosome 6 clone RP11-316M18 map 6... 36 0.58 11
(AL844179) Zebrafish DNA sequence from clone DKEY-218M22. 38 0.60 8
(ER801962) PPTHO50TF Solanum tuberosum RHPOTKEY BAC ends Sol... 46 0.62 2
(CP000552) Prochlorococcus marinus str. MIT 9515, complete g... 36 0.67 21
(AG528483) Mus musculus molossinus DNA, clone:MSMg01-437L11.... 38 0.68 2
(EK585747) 1095522074222 Global-Ocean-Sampling_GS-32-01-01-1... 38 0.79 2
(AZ535807) ENTBR36TR Entamoeba histolytica Sheared DNA Entam... 42 0.87 3
(CT027606) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 38 0.89 8
(BJ419728) Dictyostelium discoideum cDNA clone:ddv37c02, 5' ... 30 0.91 5
(AM440377) Vitis vinifera, whole genome shotgun sequence, co... 38 0.95 3
(BC132736) Homo sapiens coiled-coil domain containing 88A, m... 32 0.95 6
(BI451138) kx11b12.y3 Parastrongyloides trichosuri IL pAMP1 ... 42 0.97 3
(EJ840421) 1093017827140 Global-Ocean-Sampling_GS-30-02-01-1... 38 1.1 4
(AX417035) Sequence 4026 from Patent WO0228891. 42 1.1 10
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 32 1.1 13
(AE014820) Plasmodium falciparum 3D7 chromosome 14 section 5... 36 1.2 11
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 32 1.3 22
(AC010887) Homo sapiens BAC clone RP11-395A12 from 2, comple... 38 1.3 7
(BX537304) Zebrafish DNA sequence from clone CH211-283H6 in ... 48 1.4 1
(BX005305) Zebrafish DNA sequence from clone DKEY-29C11 in l... 48 1.4 1
(AC135782) Homo sapiens chromosome 16 clone CTD-2555A7, comp... 48 1.4 1
(AC137288) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 48 1.4 1
(AC136911) Homo sapiens chromosome 16 clone RP11-933C23, WOR... 48 1.4 1
(AC135772) Rattus norvegicus clone CH230-142J11, *** SEQUENC... 48 1.4 1
(AC112597) Rattus norvegicus clone CH230-107C23, WORKING DRA... 48 1.4 1
(AC107468) Rattus norvegicus clone CH230-138D19, *** SEQUENC... 48 1.4 1
(AC099209) Rattus norvegicus clone CH230-135J1, *** SEQUENCI... 48 1.4 1
(CU914506) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 1.4 1
(CU855711) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 1.4 1
(AC016684) Homo sapiens chromosome 5 clone RP11-68G9, WORKIN... 48 1.4 1
(CZ766193) OC__Ba0121K22.r OC__Ba Oryza coarctata genomic cl... 48 1.4 1
(EC825567) SME00002632 esmbsro2 Sawyeria marylandensis cDNA,... 48 1.4 1
(AU071613) Dictyostelium discoideum slug cDNA, clone SSB895. 48 1.4 1
(AU036976) Dictyostelium discoideum slug cDNA, clone SSB895. 48 1.4 1
(AU034937) Dictyostelium discoideum slug cDNA, clone SLE367. 48 1.4 1
(BJ374011) Dictyostelium discoideum cDNA clone:ddc5i21, 3' e... 48 1.4 1
(BJ373815) Dictyostelium discoideum cDNA clone:ddc4j01, 3' e... 48 1.4 1
(BJ373303) Dictyostelium discoideum cDNA clone:ddc2k17, 3' e... 48 1.4 1
(BJ373167) Dictyostelium discoideum cDNA clone:ddc1c22, 3' e... 48 1.4 1
(BJ372911) Dictyostelium discoideum cDNA clone:ddc14n22, 3' ... 48 1.4 1
(BJ372389) Dictyostelium discoideum cDNA clone:ddc12n11, 3' ... 48 1.4 1
(BJ372369) Dictyostelium discoideum cDNA clone:ddc12g07, 3' ... 48 1.4 1
(BJ372081) Dictyostelium discoideum cDNA clone:ddc11o04, 3' ... 48 1.4 1
(CP000609) Methanococcus maripaludis C5, complete genome. 48 1.4 1
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 34 1.5 20
(AM484887) Vitis vinifera contig VV78X082114.14, whole genom... 36 1.6 5
(AM426695) Vitis vinifera contig VV78X121677.2, whole genome... 42 1.6 2
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 36 1.7 23
(AB012239) Arabidopsis thaliana genomic DNA, chromosome 5, T... 40 1.8 5
(DX217623) OR_ABa0092N02.r OR_ABa Oryza ridleyi genomic clon... 36 2.1 2
(FG081055) UI-FF-IH0-aav-f-21-0-UI.r1 Ceratitis capitata adu... 34 2.3 3
(DX348792) OR_ABa0279K07.f OR_ABa Oryza ridleyi genomic clon... 36 2.3 2
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 34 2.5 17
(AM649386) Entamoeba moshkovskii FIC GSS, clone mosh067c03.p1k. 46 2.6 2
(AM591143) Paracentrotus lividus EST, clone MPMGp1173B1755Q,... 38 2.7 3
(FI008999) CHO_OF6903xl17f1.ab1 CHO_OF6 Nicotiana tabacum ge... 40 2.8 2
(AC177908) Zea mays chromosome 1 clone CH201-155K9; ZMMBBc01... 36 2.8 2
(CU651590) M.truncatula DNA sequence from clone MTH2-69F9 on... 36 3.2 7
(EJ006974) 1091139284572 Global-Ocean-Sampling_GS-26-01-01-1... 42 3.2 2
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 32 3.3 15
(AC171168) Medicago truncatula chromosome 2 BAC clone mth2-9... 40 3.5 8
(CP000253) Staphylococcus aureus subsp. aureus NCTC 8325, co... 40 3.6 20
(DN215188) MEST909_H08.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRN... 36 3.8 2
(CC787312) ZMMBBb0155B15.r ZMMBBb Zea mays subsp. mays genom... 36 3.8 2
(AL445565) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 36 3.8 16
(AC177214) Strongylocentrotus purpuratus clone R3-1034N20, W... 34 3.8 9
(CR753906) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 4.1 7
(AB201172) Homo sapiens GRDN mRNA for girdin, complete cds. 32 4.2 6
(AC115607) Dictyostelium discoideum chromosome 2 map 4559693... 32 4.3 7
(AB102780) Dictyostelium discoideum K4 mRNA for kinesin-rela... 40 4.6 4
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 36 4.7 14
(BJ409464) Dictyostelium discoideum cDNA clone:dds41l24, 3' ... 38 4.8 3
(BJ418024) Dictyostelium discoideum cDNA clone:ddv31l07, 5' ... 34 4.9 3

>(BJ374160) Dictyostelium discoideum cDNA clone:ddc6e19, 3' end,
single read.
Length = 719

Score = 1084 bits (547), Expect(4) = 0.0
Identities = 547/547 (100%)
Strand = Plus / Minus


Query: 606 gaattgaaattaataaacaacaagacattcaattcgaggagataaacaaatgaaaagatt 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gaattgaaattaataaacaacaagacattcaattcgaggagataaacaaatgaaaagatt 555


Query: 666 gaaatcattgaaaaagaatttcaacagcaaaagactgaatatgaaattcaaattcaacaa 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gaaatcattgaaaaagaatttcaacagcaaaagactgaatatgaaattcaaattcaacaa 495


Query: 726 ttggaacaacaattacaagagattcaagaatcagcgggtccaactgaatctcaattaatt 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ttggaacaacaattacaagagattcaagaatcagcgggtccaactgaatctcaattaatt 435


Query: 786 gaacaattggaacaagagaaacaagagattcaaaaattagaacaagaaatttctacaagc 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gaacaattggaacaagagaaacaagagattcaaaaattagaacaagaaatttctacaagc 375


Query: 846 cttgaaaatgaatataatgaaattaaatcaatctctgaacaaaatcaaagggaattggag 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cttgaaaatgaatataatgaaattaaatcaatctctgaacaaaatcaaagggaattggag 315


Query: 906 caattgaaattaaatacctctacaaatgaaaatgaattaaaattagtaaaagagaaatta 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 caattgaaattaaatacctctacaaatgaaaatgaattaaaattagtaaaagagaaatta 255


Query: 966 gatcaagagaagcaagaaatattgaataaattagaatctacaggtttacttgaaactaaa 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gatcaagagaagcaagaaatattgaataaattagaatctacaggtttacttgaaactaaa 195


Query: 1026 agacaattggagaaagtgaaacaacaagcaattgaaattgaatcacaaattgtaacatta 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 agacaattggagaaagtgaaacaacaagcaattgaaattgaatcacaaattgtaacatta 135


Query: 1086 aaacaaagtgaaaaacaattaaaagttgatttaactgaaaccaaagaagataaacatcgt 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 aaacaaagtgaaaaacaattaaaagttgatttaactgaaaccaaagaagataaacatcgt 75


Query: 1146 atttcaa 1152
|||||||
Sbjct: 74 atttcaa 68

Score = 194 bits (98), Expect(4) = 0.0
Identities = 98/98 (100%)
Strand = Plus / Minus


Query: 501 agttaaatattgatcaagaagcaatttcaaaattggattcagagattcaacgttaccaaa 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 agttaaatattgatcaagaagcaatttcaaaattggattcagagattcaacgttaccaaa 660


Query: 561 atcgtcattttgaatcgattgaagtttatgaagagatt 598
||||||||||||||||||||||||||||||||||||||
Sbjct: 659 atcgtcattttgaatcgattgaagtttatgaagagatt 622

Score = 63.9 bits (32), Expect(4) = 0.0
Identities = 41/44 (93%)
Strand = Plus / Minus


Query: 1176 gaattagttcgtgcaaaagataatacagagaaaatgattaaaaa 1219
||||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 46 gaattagttcgtgcaaaagataatacagaaaaaataataaaaaa 3

Score = 42.1 bits (21), Expect(4) = 0.0
Identities = 21/21 (100%)
Strand = Plus / Minus


Query: 1154 ggcaaagaaaaagattcaaga 1174
|||||||||||||||||||||
Sbjct: 67 ggcaaagaaaaagattcaaga 47

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,383,505,953
Number of extensions: 151993116
Number of successful extensions: 12991427
Number of sequences better than 10.0: 175
Length of query: 2210
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 2186
Effective length of database: 97,308,875,965
Effective search space: 212717202859490
Effective search space used: 212717202859490
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7. 1
Homology vs Protein
Query= Contig-U11841-1 (Contig-U11841-1Q) /CSM_Contig/Contig-U11841-1Q.Seq.d
(2210 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

L36202_1(L36202|pid:none) Dictyostelium discoideum fimbrin (fimA... 120 2e-25
(P54680) RecName: Full=Fimbrin; 120 2e-25
AM920428_548(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 110 2e-22
L33405_1(L33405|pid:none) Schistosoma mansoni fimbrin (FM) mRNA,... 109 5e-22
AM600681_1(AM600681|pid:none) Oncorhynchus mykiss partial mRNA f... 108 6e-22
CR858800_1(CR858800|pid:none) Pongo abelii mRNA; cDNA DKFZp459F2... 108 8e-22
BC031083_1(BC031083|pid:none) Homo sapiens plastin 1 (I isoform)... 108 8e-22
(Q14651) RecName: Full=Plastin-1; AltName: Full=Intestine-specif... 108 8e-22
AK290316_1(AK290316|pid:none) Homo sapiens cDNA FLJ78068 complet... 108 8e-22
(Q6P698) RecName: Full=Plastin-2; AltName: Full=L-plastin; AltNa... 107 1e-21
CP000500_377(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 107 1e-21
(Q3V0K9) RecName: Full=Plastin-1; &AK133070_1(AK133070|pid:none... 107 1e-21
BT064193_1(BT064193|pid:none) Zea mays full-length cDNA clone ZM... 107 2e-21
BC076470_1(BC076470|pid:none) Danio rerio plastin 3 (T isoform),... 107 2e-21
(P19179) RecName: Full=Plastin-1; AltName: Full=Fimbrin; &A3709... 106 3e-21
BC061655_1(BC061655|pid:none) Xenopus laevis hypothetical protei... 106 4e-21
FN392320_674(FN392320|pid:none) Pichia pastoris GS115 chromosome... 106 4e-21
FM992693_272(FM992693|pid:none) Candida dubliniensis CD36 chromo... 105 5e-21
CR382137_836(CR382137|pid:none) Debaryomyces hansenii strain CBS... 105 7e-21
BC094886_1(BC094886|pid:none) Xenopus tropicalis plastin 3 (T is... 105 9e-21
AP003202_3(AP003202|pid:none) Oryza sativa Japonica Group genomi... 105 9e-21
A84461(A84461) probable fimbrin [imported] - Arabidopsis thalian... 104 1e-20
AJ719624_1(AJ719624|pid:none) Gallus gallus mRNA for hypothetica... 104 2e-20
AK300575_1(AK300575|pid:none) Homo sapiens cDNA FLJ50683 complet... 103 2e-20
AL589842_1(AL589842|pid:none) Human DNA sequence from clone RP11... 103 2e-20
(A7E3Q8) RecName: Full=Plastin-3; AltName: Full=T-plastin; &BT0... 103 2e-20
S31765(S31765) T-plastin - rat (fragment) &X70706_1(X70706|pid:... 103 2e-20
(O88818) RecName: Full=Plastin-3; AltName: Full=T-plastin; &AB0... 103 2e-20
BC089653_1(BC089653|pid:none) Xenopus tropicalis MGC107867 prote... 103 2e-20
CR859218_1(CR859218|pid:none) Pongo abelii mRNA; cDNA DKFZp459D0... 103 2e-20
M22299_1(M22299|pid:none) Human T-plastin polypeptide mRNA, comp... 103 2e-20
AJ720945_1(AJ720945|pid:none) Gallus gallus mRNA for hypothetica... 103 2e-20
(Q99K51) RecName: Full=Plastin-3; AltName: Full=T-plastin; &AB1... 103 2e-20
AK160501_1(AK160501|pid:none) Mus musculus adult male tongue cDN... 103 2e-20
AY893127_1(AY893127|pid:none) Synthetic construct Homo sapiens c... 103 2e-20
(P13797) RecName: Full=Plastin-3; AltName: Full=T-plastin; &A34... 103 2e-20
AK222801_1(AK222801|pid:none) Homo sapiens mRNA for plastin 3 va... 103 2e-20
BC167378_1(BC167378|pid:none) Xenopus tropicalis hypothetical pr... 103 2e-20
(Q63598) RecName: Full=Plastin-3; AltName: Full=T-plastin; 103 2e-20
AK030996_1(AK030996|pid:none) Mus musculus adult male thymus cDN... 103 3e-20
AK151542_1(AK151542|pid:none) Mus musculus bone marrow macrophag... 103 3e-20
CR380948_81(CR380948|pid:none) Candida glabrata strain CBS138 ch... 103 3e-20
(Q61233) RecName: Full=Plastin-2; AltName: Full=L-plastin; AltNa... 103 3e-20
(A6H742) RecName: Full=Plastin-1; &BC146105_1(BC146105|pid:none) 103 3e-20
(O59945) RecName: Full=Fimbrin; &AF053722_1(AF053722|pid:none) ... 102 5e-20
CP001291_4282(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 82 5e-20
AE016820_437(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 102 6e-20
AB020745_9(AB020745|pid:none) Arabidopsis thaliana genomic DNA, ... 101 1e-19
(Q9FJ70) RecName: Full=Putative fimbrin-like protein 3; &AB0154... 101 1e-19
AP004040_3(AP004040|pid:none) Oryza sativa Japonica Group genomi... 100 2e-19
FM200069_1(FM200069|pid:none) Histomonas meleagridis partial mRN... 100 2e-19
U66424_1(U66424|pid:none) Arabidopsis thaliana fimbrin-like prot... 100 2e-19
AK318682_1(AK318682|pid:none) Arabidopsis thaliana AT4G26700 mRN... 100 2e-19
AK316790_1(AK316790|pid:none) Arabidopsis thaliana AT4G26700 mRN... 100 2e-19
AP005643_13(AP005643|pid:none) Oryza sativa Japonica Group genom... 100 2e-19
AE014298_2678(AE014298|pid:none) Drosophila melanogaster chromos... 100 4e-19
CU928176_273(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 97 2e-18
(Q9FKI0) RecName: Full=Fimbrin-like protein 2; &AB011485_5(AB01... 96 4e-18
BC105483_1(BC105483|pid:none) Bos taurus plastin 3 (T isoform), ... 96 4e-18
CU633455_30(CU633455|pid:none) Podospora anserina genomic DNA ch... 96 6e-18
AF042668_1(AF042668|pid:none) Arabidopsis thaliana fimbrin 1 mRN... 95 9e-18
BC063742_1(BC063742|pid:none) Danio rerio plastin 1 (I isoform),... 94 3e-17
CR940347_652(CR940347|pid:none) Theileria annulata strain Ankara... 69 6e-17
T06799(T06799) fimbrin/plastin-like protein - wheat (fragment) ... 92 1e-16
AL844503_62(AL844503|pid:none) Plasmodium falciparum 3D7 chromos... 69 9e-15
CP000123_804(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 64 2e-14
(O76329) RecName: Full=Interaptin; AltName: Full=Alpha-actinin B... 60 3e-14
U77673_1(U77673|pid:none) Arabidopsis thaliana fimbrin-like prot... 84 3e-14
CP000123_802(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 72 6e-14
AM459664_1(AM459664|pid:none) Vitis vinifera contig VV78X045040.... 82 6e-14
(Q8IIG7) RecName: Full=Uncharacterized protein PF11_0207; &AE01... 78 7e-14
AF360120_1(AF360120|pid:none) Human herpesvirus 8 ORF73 gene, co... 80 3e-13
T18372(T18372) repeat organellar protein - Plasmodium chabaudi ... 64 2e-12
AL844509_110(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 59 2e-12
AF207901_1(AF207901|pid:none) Xenopus laevis cingulin mRNA, comp... 62 2e-12
(Q9PTD7) RecName: Full=Cingulin; 62 2e-12
BX572633_2(BX572633|pid:none) Zebrafish DNA sequence from clone ... 67 2e-12
AM999887_1158(AM999887|pid:none) Wolbachia endosymbiont of Culex... 60 2e-12
FM992691_467(FM992691|pid:none) Candida dubliniensis CD36 chromo... 65 5e-12
BC008588_1(BC008588|pid:none) Homo sapiens, Similar to plastin 3... 75 8e-12
AF305694_1(AF305694|pid:none) Kaposi's sarcoma-associated herpes... 75 8e-12
AB058959_1(AB058959|pid:none) Patinopecten yessoensis mRNA for m... 55 8e-12
U93872_83(U93872|pid:none) Kaposi's sarcoma-associated herpesvir... 74 2e-11
CP001454_12(CP001454|pid:none) Borrelia burgdorferi WI91-23 plas... 61 2e-11
CP001229_945(CP001229|pid:none) Sulfurihydrogenibium azorense Az... 74 2e-11
AM910991_242(AM910991|pid:none) Plasmodium knowlesi strain H chr... 60 2e-11
(P54697) RecName: Full=Myosin-J heavy chain; AltName: Full=Myosi... 59 3e-11
T18278(T18278;T30579) myosin heavy chain [similarity] - slime mo... 59 3e-11
(Q54G05) RecName: Full=Putative leucine-rich repeat-containing p... 59 3e-11
A45605(A45605;A54517)mature-parasite-infected erythrocyte surfac... 55 4e-11
M69183_1(M69183|pid:none) Plasmodium falciparum (MESA) mRNA exon... 55 4e-11
AL844506_105(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 58 5e-11
AM502246_231(AM502246|pid:none) Leishmania infantum chromosome 28. 56 5e-11
(P43047) RecName: Full=Uncharacterized protein MCAP_0864; AltNam... 61 5e-11
AY042084_3(AY042084|pid:none) Plasmodium falciparum erythrocyte ... 62 7e-11
CR548612_182(CR548612|pid:none) Paramecium tetraurelia macronucl... 58 7e-11
AE014188_70(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 68 8e-11
AL844504_8(AL844504|pid:none) Plasmodium falciparum 3D7 chromoso... 59 9e-11
BC044408_1(BC044408|pid:none) Danio rerio structural maintenance... 60 9e-11
BX649294_1(BX649294|pid:none) Zebrafish DNA sequence from clone ... 60 9e-11
BC165249_1(BC165249|pid:none) Danio rerio structural maintenance... 60 9e-11
AM910995_58(AM910995|pid:none) Plasmodium knowlesi strain H chro... 62 1e-10
CP000061_184(CP000061|pid:none) Aster yellows witches'-broom phy... 62 1e-10
CP000885_3166(CP000885|pid:none) Clostridium phytofermentans ISD... 57 1e-10
FJ897525_1(FJ897525|pid:none) Bombyx mandarina clone B myosin he... 63 1e-10
BC159134_1(BC159134|pid:none) Xenopus tropicalis hypothetical pr... 49 2e-10
CP000123_803(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 70 2e-10
T18352(T18352) protein P120 - Mycoplasma hominis &U22019_1(U220... 70 2e-10
CR940347_653(CR940347|pid:none) Theileria annulata strain Ankara... 56 3e-10
AM910994_140(AM910994|pid:none) Plasmodium knowlesi strain H chr... 64 3e-10
AC007357_25(AC007357|pid:none) Arabidopsis thaliana chromosome 1... 55 3e-10
(P58301) RecName: Full=DNA double-strand break repair rad50 ATPa... 57 3e-10
AB264661_1(AB264661|pid:none) Papilio xuthus mRNA for muscle myo... 59 4e-10
BC172390_1(BC172390|pid:none) Synthetic construct Homo sapiens c... 51 4e-10
(Q9Y2K3) RecName: Full=Myosin-15; AltName: Full=Myosin heavy cha... 51 4e-10
BC139006_1(BC139006|pid:none) Mus musculus cingulin-like 1, mRNA... 51 4e-10
L03534_1(L03534|pid:none) Entamoeba histolytica myosin heavy cha... 59 7e-10
CR548612_442(CR548612|pid:none) Paramecium tetraurelia macronucl... 58 7e-10
(P37709) RecName: Full=Trichohyalin; &CS673546_1(CS673546|pid:n... 57 7e-10
AJ535316_1(AJ535316|pid:none) Xenopus laevis mRNA for structural... 60 7e-10
AC115680_34(AC115680|pid:none) Dictyostelium discoideum chromoso... 69 7e-10
S18199(S18199) myosin heavy chain - chicken (fragment) &X59552_... 57 9e-10
BC167433_1(BC167433|pid:none) Danio rerio hypothetical protein L... 66 9e-10
AB240551_1(AB240551|pid:none) Paralichthys olivaceus mRNA for hy... 69 9e-10
CP000084_1312(CP000084|pid:none) Candidatus Pelagibacter ubique ... 69 9e-10
AM422018_415(AM422018|pid:none) Candidatus Phytoplasma australie... 69 9e-10
AB019691_1(AB019691|pid:none) Homo sapiens mRNA for Centrosome- ... 52 1e-09
A45973(A45973) trichohyalin - human &CS673550_1(CS673550|pid:no... 56 1e-09
AE013599_3545(AE013599|pid:none) Drosophila melanogaster chromos... 52 1e-09
CP000609_181(CP000609|pid:none) Methanococcus maripaludis C5, co... 68 1e-09
AM999887_162(AM999887|pid:none) Wolbachia endosymbiont of Culex ... 68 1e-09
CT005253_116(CT005253|pid:none) Leishmania major strain Friedlin... 51 1e-09
S03166(S03166;A27066;A26045;A36604;A43298) myosin heavy chain, g... 55 1e-09
AF056936_1(AF056936|pid:none) Plasmodium falciparum mature paras... 55 2e-09
DQ022376_1(DQ022376|pid:none) Danio rerio smooth muscle myosin h... 54 2e-09
BC162152_1(BC162152|pid:none) Danio rerio myosin, heavy polypept... 54 2e-09
T18356(T18356) membrane protein p120 - Mycoplasma hominis &X784... 67 2e-09
AM422018_797(AM422018|pid:none) Candidatus Phytoplasma australie... 67 2e-09
AJ545046_1(AJ545046|pid:none) Mycoplasma hominis vmp gene for va... 62 3e-09
AF335500_1(AF335500|pid:none) Physarum polycephalum major plasmo... 66 3e-09
(P12847) RecName: Full=Myosin-3; AltName: Full=Myosin heavy chai... 55 3e-09
BC126305_1(BC126305|pid:none) Homo sapiens CAP-GLY domain contai... 63 3e-09
BC114213_1(BC114213|pid:none) Homo sapiens CAP-GLY domain contai... 63 3e-09
AJ409115_1(AJ409115|pid:none) Paramecium tetraurelia macronuclea... 52 3e-09
CP001552_13(CP001552|pid:none) Borrelia burgdorferi 29805 plasmi... 61 3e-09
BX950229_1397(BX950229|pid:none) Methanococcus maripaludis strai... 67 3e-09
CT005271_71(CT005271|pid:none) Leishmania major strain Friedlin,... 59 3e-09
BX842624_9(BX842624|pid:none) Neurospora crassa DNA linkage grou... 62 3e-09
U51472_1(U51472|pid:none) Felis catus superfast myosin heavy cha... 55 3e-09
AF212147_1(AF212147|pid:none) Oryctolagus cuniculus skeletal mus... 51 3e-09
AC116957_105(AC116957|pid:none) Dictyostelium discoideum chromos... 65 3e-09
CP000866_750(CP000866|pid:none) Nitrosopumilus maritimus SCM1, c... 50 3e-09
CP000721_938(CP000721|pid:none) Clostridium beijerinckii NCIMB 8... 54 4e-09
CP000745_636(CP000745|pid:none) Methanococcus maripaludis C7, co... 66 5e-09
CR855260_1(CR855260|pid:none) Zebrafish DNA sequence from clone ... 55 5e-09
(Q9UKX3) RecName: Full=Myosin-13; AltName: Full=Myosin heavy cha... 57 5e-09
(Q9WVQ0) RecName: Full=Polyamine-modulated factor 1-binding prot... 66 6e-09
AY166677_1(AY166677|pid:none) Plasmodium reichenowi reticulocyte... 66 6e-09
BC137284_1(BC137284|pid:none) Homo sapiens centrosomal protein 1... 55 7e-09
AF513978_1(AF513978|pid:none) Homo sapiens CENTRIOLIN mRNA, comp... 55 7e-09
BC170424_1(BC170424|pid:none) Xenopus laevis nonmuscle myosin II... 52 7e-09
AK074079_1(AK074079|pid:none) Homo sapiens mRNA for FLJ00150 pro... 55 7e-09
AL137068_4(AL137068|pid:none) Human DNA sequence from clone RP11... 55 7e-09
BC047253_1(BC047253|pid:none) Xenopus laevis nonmuscle myosin II... 50 7e-09
AL137068_6(AL137068|pid:none) Human DNA sequence from clone RP11... 55 7e-09
BC155635_1(BC155635|pid:none) Danio rerio RUN and FYVE domain co... 45 7e-09
BC134954_1(BC134954|pid:none) Danio rerio RUN and FYVE domain co... 45 7e-09
L04159_1(L04159|pid:none) Plasmodium falciparum unknown gene. 65 8e-09
DQ411847_1(DQ411847|pid:none) Physarum polycephalum rad50 mRNA, ... 65 8e-09
AL844508_36(AL844508|pid:none) Plasmodium falciparum 3D7 chromos... 65 8e-09
(Q8IDX6) RecName: Full=Reticulocyte-binding protein 2 homolog a;... 65 8e-09
AF312916_1(AF312916|pid:none) Plasmodium falciparum reticulocyte... 65 8e-09
AB258222_1(AB258222|pid:none) Oryzias latipes gene for fast skel... 60 9e-09
(P25386) RecName: Full=Intracellular protein transport protein U... 58 9e-09
X54378_1(X54378|pid:none) S.cerevisiae gene for Uso1 protein, in... 58 9e-09
AC011914_9(AC011914|pid:none) Arabidopsis thaliana chromosome 1 ... 63 9e-09
CP001229_1223(CP001229|pid:none) Sulfurihydrogenibium azorense A... 53 9e-09
AJ276417_1(AJ276417|pid:none) Drosophila melanogaster GM130 gene... 49 9e-09
CP000923_199(CP000923|pid:none) Thermoanaerobacter sp. X514, com... 65 1e-08
CP000924_1961(CP000924|pid:none) Thermoanaerobacter pseudethanol... 65 1e-08
EF568108_62(EF568108|pid:none) Glossina pallidipes salivary glan... 62 1e-08
(Q15643) RecName: Full=Thyroid receptor-interacting protein 11; ... 59 1e-08
BX641024_1(BX641024|pid:none) Homo sapiens mRNA; cDNA DKFZp686C0... 59 1e-08
L03188_1(L03188|pid:none) Saccharomyces cerevisiae integrin anal... 62 1e-08
U41990_2(U41990|pid:none) Caenorhabditis elegans cosmid F52B10, ... 52 2e-08
T16416(T16416)hypothetical protein F52B10.1 - Caenorhabditis ele... 52 2e-08
AF142406_1(AF142406|pid:none) Babesia bigemina 200 kDa antigen p... 52 2e-08
BC059323_1(BC059323|pid:none) Xenopus laevis hypothetical protei... 56 2e-08
EU841911_1(EU841911|pid:none) Xenopus laevis smooth muscle myosi... 54 2e-08
EU841912_1(EU841912|pid:none) Xenopus laevis smooth muscle myosi... 54 2e-08
AF148805_82(AF148805|pid:none) Human herpesvirus 8 type P isolat... 64 2e-08
(Q9Z221) RecName: Full=Polyamine-modulated factor 1-binding prot... 64 2e-08
CR548612_382(CR548612|pid:none) Paramecium tetraurelia macronucl... 64 2e-08
(P14105) RecName: Full=Myosin-9; AltName: Full=Myosin heavy chai... 60 2e-08
AB057661_1(AB057661|pid:none) Gallus gallus myosin heavy chain m... 54 2e-08
AE000657_451(AE000657|pid:none) Aquifex aeolicus VF5, complete g... 62 2e-08
CR385063_3(CR385063|pid:none) Zebrafish DNA sequence from clone ... 64 2e-08
AL021811_17(AL021811|pid:none) Arabidopsis thaliana DNA chromoso... 64 2e-08
AC024742_1(AC024742|pid:none) Caenorhabditis elegans cosmid Y104... 64 2e-08
AE017194_4937(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 64 2e-08
AY150465_1(AY150465|pid:none) Arabidopsis thaliana unknown prote... 64 2e-08
BC158017_1(BC158017|pid:none) Mus musculus CDC42 binding protein... 54 3e-08
CP000679_1519(CP000679|pid:none) Caldicellulosiruptor saccharoly... 56 3e-08
AL844504_46(AL844504|pid:none) Plasmodium falciparum 3D7 chromos... 53 3e-08
T22976(T22976;T23157) hypothetical protein F59A2.6 - Caenorhabdi... 57 3e-08
AB012247_4(AB012247|pid:none) Arabidopsis thaliana genomic DNA, ... 54 3e-08
(Q9LW85) RecName: Full=MAR-binding filament-like protein 1; &BT... 54 3e-08
DQ286057_1(DQ286057|pid:none) Hydra vulgaris myosin heavy chain ... 63 4e-08
A57013(A57013;S44243) early endosome antigen 1 - human &L40157_... 63 4e-08
A72287(A72287) hypothetical protein TM1182 - Thermotoga maritima... 63 4e-08
T47237(T47237) myosin II heavy chain [imported] - Naegleria fowl... 63 4e-08
AF042349_1(AF042349|pid:none) Loligo pealei myosin heavy chain i... 63 4e-08
(Q15075) RecName: Full=Early endosome antigen 1; AltName: Full=E... 63 4e-08
AY040821_1(AY040821|pid:none) Loligo pealei non-muscle myosin II... 57 4e-08
AY277505_1(AY277505|pid:none) Plasmodium falciparum isolate Hond... 56 5e-08
CP001176_3093(CP001176|pid:none) Bacillus cereus B4264, complete... 62 5e-08
CP001283_3162(CP001283|pid:none) Bacillus cereus AH820, complete... 63 5e-08
AF113971_1(AF113971|pid:none) Schistosoma japonicum paramyosin m... 63 5e-08
EF025362_1(EF025362|pid:none) Synthetic construct multivalent an... 63 5e-08
(Q05870) RecName: Full=Paramyosin; AltName: Full=Antigen Sj97; ... 63 5e-08
AK126990_1(AK126990|pid:none) Homo sapiens cDNA FLJ45045 fis, cl... 63 5e-08
EF025370_1(EF025370|pid:none) Synthetic construct multivalent an... 63 5e-08
EF025368_1(EF025368|pid:none) Synthetic construct multivalent an... 63 5e-08
EF025355_1(EF025355|pid:none) Synthetic construct multivalent an... 63 5e-08
AE014186_398(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 63 5e-08
EF025358_1(EF025358|pid:none) Synthetic construct multivalent an... 63 5e-08
EF025372_1(EF025372|pid:none) Synthetic construct multivalent an... 63 5e-08
AM502232_118(AM502232|pid:none) Leishmania infantum chromosome 14. 63 5e-08
CP000866_573(CP000866|pid:none) Nitrosopumilus maritimus SCM1, c... 63 5e-08
EU488865_1(EU488865|pid:none) Schistosoma japonicum clone 30Xa/L... 63 5e-08
CU633445_101(CU633445|pid:none) Podospora anserina genomic DNA c... 50 6e-08
AY229987_101(AY229987|pid:none) Cryptophlebia leucotreta granulo... 54 6e-08
AP009178_217(AP009178|pid:none) Nitratiruptor sp. SB155-2 genomi... 62 7e-08
AC116920_30(AC116920|pid:none) Dictyostelium discoideum chromoso... 62 7e-08
AM502232_120(AM502232|pid:none) Leishmania infantum chromosome 14. 62 7e-08
AE016877_3053(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 62 7e-08
(Q295G5) RecName: Full=Eukaryotic translation initiation factor ... 62 7e-08
EU930276_1(EU930276|pid:none) Simulium vittatum clone SV-38 hypo... 62 7e-08
FJ029108_1(FJ029108|pid:none) Bombyx mori clone B myosin heavy c... 62 7e-08
CP000969_1610(CP000969|pid:none) Thermotoga sp. RQ2, complete ge... 62 7e-08
(A8MZA4) RecName: Full=Putative golgin subfamily A member 6-like... 59 8e-08
AK302092_1(AK302092|pid:none) Homo sapiens cDNA FLJ61456 complet... 62 9e-08
BC132667_1(BC132667|pid:none) Homo sapiens myosin, heavy chain 6... 62 9e-08
CP000393_2580(CP000393|pid:none) Trichodesmium erythraeum IMS101... 62 9e-08
AJ237670_1(AJ237670|pid:none) Rattus norvegicus mRNA for CLIP-17... 62 9e-08
BC125086_1(BC125086|pid:none) Homo sapiens coiled-coil domain co... 46 1e-07
BC125087_1(BC125087|pid:none) Homo sapiens coiled-coil domain co... 52 1e-07
(Q9TV62) RecName: Full=Myosin-4; AltName: Full=Myosin heavy chai... 62 1e-07
(P22793) RecName: Full=Trichohyalin; &A40691(A40691;A34209;S326... 62 1e-07
AF112359_1(AF112359|pid:none) Schmidtea mediterranea clone M11 m... 62 1e-07
AB015484_1(AB015484|pid:none) Dugesia japonica mRNA for myosin h... 62 1e-07
AL670008_4(AL670008|pid:none) Neurospora crassa DNA linkage grou... 62 1e-07
U11825_1(U11825|pid:none) Schistosoma japonicum structural muscl... 62 1e-07
AE014188_63(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 62 1e-07
CP000923_1678(CP000923|pid:none) Thermoanaerobacter sp. X514, co... 62 1e-07
AJ582913_1(AJ582913|pid:none) Mus musculus mRNA for A-kinase anc... 52 1e-07
AE014134_2859(AE014134|pid:none) Drosophila melanogaster chromos... 56 1e-07
AE014134_2860(AE014134|pid:none) Drosophila melanogaster chromos... 56 1e-07
AE014134_2857(AE014134|pid:none) Drosophila melanogaster chromos... 56 1e-07
AB201172_1(AB201172|pid:none) Homo sapiens GRDN mRNA for girdin,... 47 1e-07
(Q3V6T2) RecName: Full=Girdin; AltName: Full=Girders of actin fi... 47 1e-07
BC132736_1(BC132736|pid:none) Homo sapiens coiled-coil domain co... 47 1e-07
BC144320_1(BC144320|pid:none) Homo sapiens coiled-coil domain co... 47 1e-07
CR382125_227(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 55 1e-07
AK220172_1(AK220172|pid:none) Mus musculus mRNA for mKIAA4046 pr... 57 1e-07
CP000675_2650(CP000675|pid:none) Legionella pneumophila str. Cor... 50 1e-07
BC091650_1(BC091650|pid:none) Xenopus laevis cingulin, mRNA (cDN... 53 1e-07
B35815(B35815) myosin heavy chain 2, muscle - fruit fly (Drosoph... 56 1e-07
D35815(D35815)myosin heavy chain 4, muscle - fruit fly (Drosophi... 56 1e-07
X53155_4(X53155|pid:none) Drosophila melanogaster MHC gene, exon... 56 1e-07
(B3EX63) RecName: Full=Cingulin; 54 1e-07
AY642382_1(AY642382|pid:none) Homo sapiens GPBP-interacting prot... 48 1e-07
(Q8IUM3) RecName: Full=Filamin A-interacting protein 1-like; Alt... 48 1e-07
AF514868_1(AF514868|pid:none) Homo sapiens GPBP-interacting prot... 48 1e-07
AF514869_1(AF514869|pid:none) Homo sapiens GPBP-interacting prot... 48 1e-07
AB110205_1(AB110205|pid:none) Oryza sativa Japonica Group mRNA f... 49 1e-07
CP000227_4526(CP000227|pid:none) Bacillus cereus Q1, complete ge... 57 1e-07
BC078168_1(BC078168|pid:none) Homo sapiens coiled-coil domain co... 47 1e-07
AE017355_2969(AE017355|pid:none) Bacillus thuringiensis serovar ... 61 2e-07
CP001215_1280(CP001215|pid:none) Bacillus anthracis str. CDC 684... 61 2e-07
AM263448_1(AM263448|pid:none) Hydra vulgaris mRNA for putative R... 61 2e-07
CP001638_1002(CP001638|pid:none) Geobacillus sp. WCH70, complete... 61 2e-07
AL731581_25(AL731581|pid:none) Oryza sativa genomic DNA, chromos... 61 2e-07
AL137141_3(AL137141|pid:none) Human DNA sequence from clone RP11... 61 2e-07
BC093827_1(BC093827|pid:none) Homo sapiens cingulin-like 1, mRNA... 57 2e-07
AY274808_1(AY274808|pid:none) Homo sapiens KIAA1749 protein mRNA... 57 2e-07
(Q0VF96) RecName: Full=Cingulin-like protein 1; AltName: Full=Pa... 57 2e-07
AY445042_1(AY445042|pid:none) Streptococcus pyogenes SpyM6 mefA ... 55 2e-07
BC118919_1(BC118919|pid:none) Homo sapiens cingulin-like 1, mRNA... 57 2e-07
CP000502_245(CP000502|pid:none) Pichia stipitis CBS 6054 chromos... 61 2e-07
BC163537_1(BC163537|pid:none) Danio rerio myosin, heavy polypept... 61 2e-07
BX510649_10(BX510649|pid:none) Zebrafish DNA sequence from clone... 61 2e-07
AB258225_1(AB258225|pid:none) Oryzias latipes gene for fast skel... 61 2e-07
CP001047_264(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 61 2e-07
BX510649_8(BX510649|pid:none) Zebrafish DNA sequence from clone ... 61 2e-07
A64505(A64505)P115 homolog - Methanococcus jannaschii 61 2e-07
BC171708_1(BC171708|pid:none) Danio rerio cDNA clone MGC:198435 ... 51 2e-07
BC139880_1(BC139880|pid:none) Danio rerio si:dkey-204a24.2, mRNA... 52 2e-07
AB051536_1(AB051536|pid:none) Homo sapiens mRNA for KIAA1749 pro... 57 2e-07
CP001080_932(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1... 58 2e-07
CR548612_251(CR548612|pid:none) Paramecium tetraurelia macronucl... 46 2e-07
EU414733_1(EU414733|pid:none) Ctenopharyngodon idella skeletal m... 60 3e-07
(B4GDX4) RecName: Full=Eukaryotic translation initiation factor ... 60 3e-07
AB258227_1(AB258227|pid:none) Oryzias latipes gene for fast skel... 60 3e-07
AL353032_19(AL353032|pid:none) Arabidopsis thaliana DNA chromoso... 60 3e-07
CP001186_3158(CP001186|pid:none) Bacillus cereus G9842, complete... 60 3e-07
CP001407_3117(CP001407|pid:none) Bacillus cereus 03BB102, comple... 60 3e-07
(Q9UZC8) RecName: Full=DNA double-strand break repair rad50 ATPa... 60 3e-07
BT011136_1(BT011136|pid:none) Drosophila melanogaster GM09007 fu... 60 3e-07
CP000485_2743(CP000485|pid:none) Bacillus thuringiensis str. Al ... 60 3e-07
CP001146_1446(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 60 3e-07
CR548612_204(CR548612|pid:none) Paramecium tetraurelia macronucl... 60 3e-07
CP000855_1429(CP000855|pid:none) Thermococcus onnurineus NA1, co... 60 3e-07
Z20656_1(Z20656|pid:none) Homo sapiens of cardiac alpha-myosin h... 60 3e-07
AB032020_1(AB032020|pid:none) Seriola dumerilii mRNA for myosin ... 59 3e-07
(P13535) RecName: Full=Myosin-8; AltName: Full=Myosin heavy chai... 60 3e-07
AE017198_1308(AE017198|pid:none) Lactobacillus johnsonii NCC 533... 60 3e-07
Z98866_24(Z98866|pid:none) Caenorhabditis elegans YAC Y49E10, co... 60 3e-07
AB472675_1(AB472675|pid:none) Oryzias latipes mMYHL2 mRNA for my... 60 3e-07
AF134172_1(AF134172|pid:none) Pecten maximus myosin heavy chain ... 60 3e-07
FN357489_12(FN357489|pid:none) Schistosoma mansoni genome sequen... 60 3e-07
AF295804_1(AF295804|pid:none) Danio rerio rho coiled-coil associ... 60 3e-07
AY130758_3(AY130758|pid:none) Caenorhabditis elegans titin locus... 60 3e-07
AF192756_1(AF192756|pid:none) Kaposi's sarcoma-associated herpes... 60 3e-07
T27055(T27055) hypothetical protein Y49E10.23 - Caenorhabditis e... 60 3e-07
I38055(I38055;JH0154;S12459;S09332;A30220;S49478) myosin heavy c... 60 3e-07
(A3LYI0) RecName: Full=Stress response protein NST1; &CP000500_... 60 3e-07
CP000312_1813(CP000312|pid:none) Clostridium perfringens SM101, ... 60 3e-07
AY032860_1(AY032860|pid:none) Caenorhabditis elegans EEA1 mRNA, ... 55 4e-07
Z81118_6(Z81118|pid:none) Caenorhabditis elegans Cosmid T10G3, c... 55 4e-07
BC041716_1(BC041716|pid:none) Xenopus laevis similar to myosin, ... 53 4e-07
T24806(T24806)hypothetical protein T10G3.5 - Caenorhabditis eleg... 55 4e-07
L41069_1(L41069|pid:none) Mus musculus testicular protein mRNA, ... 55 4e-07
(P08799) RecName: Full=Myosin-2 heavy chain; AltName: Full=Myosi... 60 4e-07
BA000011_821(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA,... 60 4e-07
(B4NIC3) RecName: Full=Eukaryotic translation initiation factor ... 60 4e-07
AL157389_1(AL157389|pid:none) Human DNA sequence from clone RP11... 60 4e-07
AL157389_2(AL157389|pid:none) Human DNA sequence from clone RP11... 60 4e-07
CP000806_361(CP000806|pid:none) Cyanothece sp. ATCC 51142 circul... 60 4e-07
AP008207_2024(AP008207|pid:none) Oryza sativa (japonica cultivar... 60 4e-07
U52064_1(U52064|pid:none) Kaposi's sarcoma-associated herpes-lik... 60 4e-07
AE016879_2982(AE016879|pid:none) Bacillus anthracis str. Ames, c... 60 4e-07
CP000227_2950(CP000227|pid:none) Bacillus cereus Q1, complete ge... 60 4e-07
BC123995_1(BC123995|pid:none) Xenopus tropicalis hypothetical pr... 60 4e-07
BC170138_1(BC170138|pid:none) Xenopus laevis cDNA clone MGC:1968... 60 4e-07
CP000246_195(CP000246|pid:none) Clostridium perfringens ATCC 131... 60 4e-07
AP003294_7(AP003294|pid:none) Oryza sativa Japonica Group genomi... 60 4e-07
CR761987_1(CR761987|pid:none) Xenopus tropicalis finished cDNA, ... 60 4e-07
AY075577_1(AY075577|pid:none) Drosophila melanogaster SD05887 fu... 60 4e-07
A26655(A26655;A24728;S00250) myosin heavy chain [similarity] - s... 60 4e-07
(Q076A3) RecName: Full=Myosin-13; AltName: Full=Myosin heavy cha... 60 4e-07
AB258224_1(AB258224|pid:none) Oryzias latipes gene for fast skel... 60 4e-07
(Q28641) RecName: Full=Myosin-4; AltName: Full=Myosin heavy chai... 60 4e-07
BC166135_1(BC166135|pid:none) Xenopus tropicalis hypothetical pr... 60 4e-07
AF041382_1(AF041382|pid:none) Drosophila melanogaster microtubul... 60 4e-07
AJ131693_1(AJ131693|pid:none) Homo sapiens mRNA for AKAP450 prot... 51 4e-07
AF083037_1(AF083037|pid:none) Homo sapiens A-kinase anchoring pr... 53 4e-07
U29381_13(U29381|pid:none) Caenorhabditis elegans cosmid F35D11,... 55 5e-07
AY803272_1(AY803272|pid:none) Homo sapiens AKAP9-BRAF fusion pro... 51 5e-07
CR382399_47(CR382399|pid:none) Plasmodium falciparum chromosome ... 57 5e-07
(Q5RA03) RecName: Full=Shootin-1; 51 5e-07
AE001362_157(AE001362|pid:none) Plasmodium falciparum 3D7 chromo... 59 6e-07
BC052414_1(BC052414|pid:none) Mus musculus inner centromere prot... 59 6e-07
U93121_1(U93121|pid:none) Homo sapiens M-phase phosphoprotein-1 ... 59 6e-07
AB303685_1(AB303685|pid:none) Hypophthalmichthys molitrix MYH sc... 59 6e-07
AB033337_1(AB033337|pid:none) Homo sapiens KRMP1 mRNA for mitoti... 59 6e-07
AK024959_1(AK024959|pid:none) Homo sapiens cDNA: FLJ21306 fis, c... 59 6e-07
BC097506_1(BC097506|pid:none) Xenopus laevis XL-INCENP protein, ... 59 6e-07
CP001047_47(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, c... 59 6e-07
AB100432_1(AB100432|pid:none) Mus musculus INCENP mRNA for inner... 59 6e-07
AE014186_199(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 59 6e-07
AP006628_690(AP006628|pid:none) Onion yellows phytoplasma OY-M D... 59 6e-07
CP001287_1060(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 59 6e-07
(Q9H3R8) RecName: Full=M-phase phosphoprotein 1; Short=... 59 6e-07
AL117496_1(AL117496|pid:none) Homo sapiens mRNA; cDNA DKFZp434B0... 59 6e-07
AJ786380_1(AJ786380|pid:none) Cryptosporidium parvum mt1 gene fo... 59 6e-07
AE013599_3803(AE013599|pid:none) Drosophila melanogaster chromos... 59 6e-07
E71606(E71606)hypothetical protein PFB0765w - malaria parasite (... 59 6e-07
CP000033_1216(CP000033|pid:none) Lactobacillus acidophilus NCFM,... 59 6e-07
AJ131892_1(AJ131892|pid:none) Gallus gallus mRNA for Hyperion pr... 58 6e-07
D89990_1(D89990|pid:none) Cyprinus carpio mRNA for myosin heavy ... 49 6e-07
(Q86XX3) RecName: Full=Serine/threonine-protein kinase MRCK alph... 50 6e-07
AL353689_7(AL353689|pid:none) Human DNA sequence from clone RP5-... 50 6e-07
AJ518975_1(AJ518975|pid:none) Homo sapiens mRNA for CDC42 bindin... 50 6e-07
AB384799_1(AB384799|pid:none) Synthetic construct DNA, clone: pF... 50 6e-07
AC116957_23(AC116957|pid:none) Dictyostelium discoideum chromoso... 52 6e-07
BC171934_1(BC171934|pid:none) Mus musculus cDNA clone MGC:198637... 49 6e-07
AL133654_1(AL133654|pid:none) Homo sapiens mRNA; cDNA DKFZp434D0... 44 6e-07
AK027863_1(AK027863|pid:none) Homo sapiens cDNA FLJ14957 fis, cl... 57 6e-07
AY088565_1(AY088565|pid:none) Arabidopsis thaliana clone 7883 mR... 59 7e-07
AB181503_1(AB181503|pid:none) Aspergillus oryzae usoA gene for A... 59 7e-07
(Q12234) RecName: Full=GRIP domain-containing protein RUD3; AltN... 59 7e-07
M31013_1(M31013|pid:none) Human nonmuscle myosin heavy chain (NM... 59 7e-07
AM285313_9(AM285313|pid:none) Spiroplasma citri GII3-3X chromoso... 59 7e-07
(P35579) RecName: Full=Myosin-9; AltName: Full=Myosin heavy chai... 59 7e-07
(P13542) RecName: Full=Myosin-8; AltName: Full=Myosin heavy chai... 59 7e-07
DQ227281_1(DQ227281|pid:none) Canis familiaris fast myosin heavy... 59 7e-07
AJ243767_1(AJ243767|pid:none) Notothenia coriiceps mRNA for fast... 59 7e-07
AK302306_1(AK302306|pid:none) Homo sapiens cDNA FLJ59579 complet... 59 7e-07
CP000102_217(CP000102|pid:none) Methanosphaera stadtmanae DSM 30... 59 7e-07
(Q9BE40) RecName: Full=Myosin-1; AltName: Full=Myosin heavy chai... 59 7e-07
CP001047_207(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 59 7e-07
BC076678_1(BC076678|pid:none) Xenopus tropicalis myosin, heavy p... 59 7e-07
AF026245_1(AF026245|pid:none) Homo sapiens yotiao mRNA, complete... 51 8e-07
AJ535204_1(AJ535204|pid:none) Anopheles gambiae mRNA for SMC2 pr... 53 8e-07
L49344_1(L49344|pid:none) Mus musculus leucine zipper protein 1 ... 48 8e-07
(Q8R4U7) RecName: Full=Leucine zipper protein 1; AltName: Full=L... 48 8e-07
AL139421_3(AL139421|pid:none) Human DNA sequence from clone RP4-... 42 8e-07
AE014188_479(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 45 8e-07
(A6NEF3) RecName: Full=Putative golgin subfamily A member 6-like... 55 8e-07
CP000947_573(CP000947|pid:none) Haemophilus somnus 2336, complet... 48 8e-07
FN357667_8(FN357667|pid:none) Schistosoma mansoni genome sequenc... 59 1e-06
U59295_1(U59295|pid:none) Placopecten magellanicus myosin heavy ... 59 1e-06
CU928174_15(CU928174|pid:none) Zygosaccharomyces rouxii strain C... 59 1e-06
AB275402_1(AB275402|pid:none) Saurida wanieso wMYH1 mRNA for myo... 59 1e-06
BC127816_1(BC127816|pid:none) Homo sapiens golgi autoantigen, go... 59 1e-06
CP001129_1836(CP001129|pid:none) Streptococcus equi subsp. zooep... 59 1e-06
FM204883_2083(FM204883|pid:none) Streptococcus equi subsp. equi ... 59 1e-06
(O61308) RecName: Full=227 kDa spindle- and centromere-associate... 59 1e-06
U59294_1(U59294|pid:none) Placopecten magellanicus myosin heavy ... 59 1e-06
FN357667_11(FN357667|pid:none) Schistosoma mansoni genome sequen... 59 1e-06
FN357667_12(FN357667|pid:none) Schistosoma mansoni genome sequen... 59 1e-06
BC150737_1(BC150737|pid:none) Mus musculus myosin, heavy polypep... 59 1e-06
BC157407_1(BC157407|pid:none) Xenopus laevis cDNA clone IMAGE:63... 59 1e-06
FN357667_9(FN357667|pid:none) Schistosoma mansoni genome sequenc... 59 1e-06
AE009439_771(AE009439|pid:none) Methanopyrus kandleri AV19, comp... 59 1e-06
BC067305_1(BC067305|pid:none) Xenopus tropicalis myosin heavy ch... 59 1e-06
AJ243769_1(AJ243769|pid:none) Notothenia coriiceps mRNA for slow... 59 1e-06
AK292599_1(AK292599|pid:none) Homo sapiens cDNA FLJ78259 complet... 59 1e-06
(Q5PQ23) RecName: Full=Outer dense fiber protein 2; AltName: Ful... 59 1e-06
BC144163_1(BC144163|pid:none) Homo sapiens structural maintenanc... 59 1e-06
(O95347) RecName: Full=Structural maintenance of chromosomes pro... 59 1e-06
FN357667_10(FN357667|pid:none) Schistosoma mansoni genome sequen... 59 1e-06
U31906_1(U31906|pid:none) Homo sapiens golgin-245 mRNA, complete... 54 1e-06
CR628337_2421(CR628337|pid:none) Legionella pneumophila str. Len... 51 1e-06
AK228666_1(AK228666|pid:none) Arabidopsis thaliana mRNA for puta... 43 1e-06
A59294(A59294) skeletal myosin - nematode (Onchocerca volvulus) ... 58 1e-06
(P32380) RecName: Full=Protein NUF1; AltName: Full=Spindle poly ... 58 1e-06
CT005266_229(CT005266|pid:none) Leishmania major strain Friedlin... 58 1e-06
AP009552_3992(AP009552|pid:none) Microcystis aeruginosa NIES-843... 58 1e-06
AF183909_3(AF183909|pid:none) Argopecten irradians MHC gene, alt... 58 1e-06
AF183909_2(AF183909|pid:none) Argopecten irradians MHC gene, alt... 58 1e-06
U09782_1(U09782|pid:none) Argopecten irradians myosin heavy chai... 58 1e-06
(B4QVI2) RecName: Full=Eukaryotic translation initiation factor ... 58 1e-06
AK302792_1(AK302792|pid:none) Homo sapiens cDNA FLJ59792 complet... 58 1e-06
CU928171_576(CU928171|pid:none) Kluyveromyces thermotolerans str... 58 1e-06
AY579200_1(AY579200|pid:none) Tetrahymena thermophila condensin ... 58 1e-06
(Q8N7Z2) RecName: Full=Golgin subfamily A member 6-like protein ... 58 1e-06
BA000016_216(BA000016|pid:none) Clostridium perfringens str. 13 ... 58 1e-06
CR380953_99(CR380953|pid:none) Candida glabrata strain CBS138 ch... 58 1e-06
CP001047_343(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 58 1e-06
AF183909_1(AF183909|pid:none) Argopecten irradians MHC gene, alt... 58 1e-06
AF039187_1(AF039187|pid:none) Schistosoma japonicum myosin mRNA,... 58 1e-06
AB280018_1(AB280018|pid:none) Molgula tectiformis Mt-MHC2 mRNA f... 58 1e-06
AY138499_1(AY138499|pid:none) Plasmodium falciparum normocyte bi... 58 1e-06
(Q86VH2) RecName: Full=Kinesin-like protein KIF27; &AL354733_3(... 44 1e-06
DQ321780_1(DQ321780|pid:none) Trichomonas vaginalis strain NIH-C... 54 1e-06
(Q03410) RecName: Full=Synaptonemal complex protein 1; ... 52 1e-06
S28061(S28061) SCP1 protein - rat &X67805_1(X67805|pid:none) 52 1e-06
CP000049_494(CP000049|pid:none) Borrelia turicatae 91E135, compl... 40 2e-06
AY692273_1(AY692273|pid:none) Borrelia turicatae P-512 gene, com... 40 2e-06
AK147211_1(AK147211|pid:none) Mus musculus 15 days embryo liver ... 56 2e-06
(P21249) RecName: Full=Major antigen; AltName: Full=Myosin-like ... 47 2e-06
(Q62812) RecName: Full=Myosin-9; AltName: Full=Myosin heavy chai... 57 2e-06
AJ312390_1(AJ312390|pid:none) Mus musculus mRNA for nonmuscle he... 56 2e-06
AP008971_958(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 58 2e-06
AE014297_91(AE014297|pid:none) Drosophila melanogaster chromosom... 58 2e-06
AL929220_5(AL929220|pid:none) Zebrafish DNA sequence from clone ... 58 2e-06
CP000916_1394(CP000916|pid:none) Thermotoga neapolitana DSM 4359... 58 2e-06
(Q9FJL0) RecName: Full=Structural maintenance of chromosomes pro... 58 2e-06
AE014298_2110(AE014298|pid:none) Drosophila melanogaster chromos... 58 2e-06
S28261(S28261) centromere protein E - human &Z15005_1(Z15005|pi... 58 2e-06
BX538350_110(BX538350|pid:none) Cryptosporidium parvum chromosom... 58 2e-06
BT001505_1(BT001505|pid:none) Drosophila melanogaster LD35838 fu... 58 2e-06
AY071601_1(AY071601|pid:none) Drosophila melanogaster RE65203 fu... 58 2e-06
CP000312_189(CP000312|pid:none) Clostridium perfringens SM101, c... 58 2e-06
AE014298_2112(AE014298|pid:none) Drosophila melanogaster chromos... 58 2e-06
DQ119137_1(DQ119137|pid:none) Aplysia californica nonmuscle myos... 58 2e-06
AM494965_241(AM494965|pid:none) Leishmania braziliensis chromoso... 58 2e-06
A59236(A59236) embryonic muscle myosin heavy chain - sea squirt ... 58 2e-06
M76600_1(M76600|pid:none) Mouse alpha cardiac myosin heavy chain... 58 2e-06
AL844505_303(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 58 2e-06
AK148323_1(AK148323|pid:none) Mus musculus B16 F10Y cells cDNA, ... 47 2e-06
AB289560_1(AB289560|pid:none) Mizuhopecten yessoensis mRNA for n... 52 2e-06
(Q49419) RecName: Full=Uncharacterized protein MG328; &C64236(C... 46 2e-06
(Q14789) RecName: Full=Golgin subfamily B member 1; AltName: Ful... 55 2e-06
A56539(A56539;S37536) giantin - human &X75304_1(X75304|pid:none) 55 2e-06
D25542_1(D25542|pid:none) Homo sapiens mRNA for golgi antigen gc... 55 2e-06
D89991_1(D89991|pid:none) Cyprinus carpio mRNA for myosin heavy ... 48 2e-06
BC153839_1(BC153839|pid:none) Bos taurus caspase recruitment dom... 57 2e-06
AY135367_1(AY135367|pid:none) Mus musculus caspase recruitment d... 57 2e-06
(Q960E0) RecName: Full=DNA repair protein RAD50; EC=3.6... 57 2e-06
U75357_1(U75357|pid:none) Schizosaccharomyces pombe myosin II (m... 57 2e-06
AB303687_1(AB303687|pid:none) Hypophthalmichthys molitrix MYH sc... 57 2e-06
(Q75AF5) RecName: Full=Golgin IMH1; &AE016817_363(AE016817|pid:... 57 2e-06
(Q9USI6) RecName: Full=Myosin type-2 heavy chain 1; AltName: Ful... 57 2e-06
AE015929_909(AE015929|pid:none) Staphylococcus epidermidis ATCC ... 57 2e-06
EU769112_1(EU769112|pid:none) Sander vitreus white muscle myosin... 57 2e-06
AK122925_1(AK122925|pid:none) Homo sapiens cDNA FLJ16610 fis, cl... 57 2e-06
AL445065_133(AL445065|pid:none) Thermoplasma acidophilum complet... 57 2e-06

>L36202_1(L36202|pid:none) Dictyostelium discoideum fimbrin (fimA)
mRNA, complete cds.
Length = 610

Score = 120 bits (301), Expect = 2e-25
Identities = 66/150 (44%), Positives = 87/150 (58%), Gaps = 1/150 (0%)
Frame = +1

Query: 1 LINSIKPKTINETTLKLNSDKLNIFEKNVNLENCLKGAKKIGIQLTNIGAGDIQEGKRHL 180
LIN P TI+E L N LN F N N C+ AK IG + NIGAGD+ EG+ HL
Sbjct: 162 LINDAVPDTIDERVL--NKKNLNAFRINENQVLCINSAKAIGCNVVNIGAGDLVEGRAHL 219

Query: 181 ILSILWQLVKIDLMNKVSKLAYRVKAEMLDLGET-EKIEELVADEILLRWVNHHLXEAGI 357
I+ + WQ++KI L +++ + +L GET E + +L +EILLRW N+HL AG
Sbjct: 220 IMGLTWQIIKIGLFARINLTNHPELYRLLHDGETIEDLLKLPVEEILLRWFNYHLAAAGS 279

Query: 358 DRRISNFSSDIKDCVVYIQLFHQLSPSICG 447
RR+ NFS DIKD Y L Q++P G
Sbjct: 280 QRRVKNFSGDIKDSECYTILLKQIAPKDAG 309

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,073,727,806
Number of extensions: 30749328
Number of successful extensions: 206544
Number of sequences better than 10.0: 7573
Number of HSP's gapped: 194601
Number of HSP's successfully gapped: 14268
Length of query: 736
Length of database: 1,051,180,864
Length adjustment: 136
Effective length of query: 600
Effective length of database: 611,008,840
Effective search space: 366605304000
Effective search space used: 366605304000
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.63 gvh: 0.22 alm: 0.43 top: 0.53 tms: 0.00 mit: 0.25 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.33 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: nuclear
28.0 %: cytoplasmic
12.0 %: cytoskeletal
8.0 %: mitochondrial
8.0 %: vacuolar

>> prediction for Contig-U11841-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 2
SF (FL, S) 1
CH (FL, L) 1
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0