| Contig-U11757-1 |
| Contig ID |
Contig-U11757-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1575 |
| Chromosome number (1..6, M) |
2 |
| Chromosome length |
8467578 |
| Start point |
6773134 |
| End point |
6771559 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
21 |
| Number of EST |
35 |
| Link to clone list |
U11757 |
| List of clone(s) |
est1=VHO706F,1,603
est2=VHL573F,7,606
est3=SHH565F,15,603
est4=VHL689F,15,606
est5=VHP894F,22,599
est6=VHA678F,27,549
est7=CHP366F,29,600
est8=VHC852F,45,670
est9=VHK838F,50,686
est10=VHF817F,54,317
est11=CHG862F,57,681
est12=VHK614F,59,687
est13=VHG190F,68,683
est14=VHH828F,68,687
est15=VHB752F,176,492
est16=VHC852Z,688,1475
est17=VHK614Z,713,1522
est18=VHP894Z,747,1542
est19=SSB290F,765,1060
est20=SSB291F,767,1324
est21=VHO706Z,803,1473
est22=VHK838Z,810,1523
est23=CHP366Z,811,1498
est24=VHL689Z,817,1498
est25=VHN221Z,818,1450
est26=VHH828Z,819,1470
est27=VHA678Z,821,1544
est28=CHG862Z,846,1497
est29=VHL573Z,846,1532
est30=VSG440Z,848,1541
est31=VHF817Z,914,1086
est32=VSB405Z,1002,1529
est33=SSH278Z,1054,1578
est34=VHB752Z,1237,1417
est35=VHG190Z,1241,1343
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.26 |
| Homology vs DNA |
Query= Contig-U11757-1 (Contig-U11757-1Q) /CSM_Contig/Contig-U11757-1Q.Seq.d
(1585 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(X74387) D. discoideum (AX2, AX3) gene for protovillin. 1524 0.0 1
(AC114261) Dictyostelium discoideum chromosome 2 map 126059-... 1524 0.0 1
(BJ443178) Dictyostelium discoideum cDNA clone:ddv52k04, 3' ... 1479 0.0 1
(BJ438172) Dictyostelium discoideum cDNA clone:ddv36h14, 3' ... 1451 0.0 2
(BJ446497) Dictyostelium discoideum cDNA clone:ddv62l24, 3' ... 1411 0.0 1
(BJ443264) Dictyostelium discoideum cDNA clone:ddv52l10, 3' ... 1287 0.0 1
(BJ383298) Dictyostelium discoideum cDNA clone:ddc52d17, 3' ... 1285 0.0 1
(BJ437003) Dictyostelium discoideum cDNA clone:ddv32k20, 3' ... 1265 0.0 1
(BJ441317) Dictyostelium discoideum cDNA clone:ddv46h08, 3' ... 1253 0.0 1
(BJ444672) Dictyostelium discoideum cDNA clone:ddv57i06, 3' ... 1249 0.0 1
(BJ445638) Dictyostelium discoideum cDNA clone:ddv60l01, 3' ... 1223 0.0 2
(BJ379684) Dictyostelium discoideum cDNA clone:ddc35l16, 3' ... 1215 0.0 1
(AU266486) Dictyostelium discoideum vegetative cDNA clone:VS... 1211 0.0 1
(BJ443952) Dictyostelium discoideum cDNA clone:ddv54a19, 3' ... 1209 0.0 1
(BJ424342) Dictyostelium discoideum cDNA clone:ddv52k04, 5' ... 977 0.0 2
(BJ422561) Dictyostelium discoideum cDNA clone:ddv46h08, 5' ... 977 0.0 2
(BJ424426) Dictyostelium discoideum cDNA clone:ddv52l10, 5' ... 975 0.0 2
(BJ421765) Dictyostelium discoideum cDNA clone:ddv43c23, 5' ... 969 0.0 2
(BJ365522) Dictyostelium discoideum cDNA clone:ddc35l16, 5' ... 967 0.0 2
(BJ419594) Dictyostelium discoideum cDNA clone:ddv36h14, 5' ... 944 0.0 2
(BJ443957) Dictyostelium discoideum cDNA clone:ddv54a24, 3' ... 916 0.0 2
(BJ425129) Dictyostelium discoideum cDNA clone:ddv54a19, 5' ... 817 0.0 2
(BJ425133) Dictyostelium discoideum cDNA clone:ddv54a24, 5' ... 817 0.0 2
(BJ426757) Dictyostelium discoideum cDNA clone:ddv60l01, 5' ... 811 0.0 2
(BJ395600) Dictyostelium discoideum cDNA clone:dds39a17, 5' ... 811 0.0 2
(BJ369931) Dictyostelium discoideum cDNA clone:ddc52d17, 5' ... 807 0.0 2
(BJ427589) Dictyostelium discoideum cDNA clone:ddv62l24, 5' ... 803 0.0 2
(AU261999) Dictyostelium discoideum vegetative cDNA clone:VS... 763 0.0 3
(BJ418476) Dictyostelium discoideum cDNA clone:ddv32k20, 5' ... 704 0.0 2
(AU038106) Dictyostelium discoideum slug cDNA, clone SSH278. 783 0.0 1
(AU071358) Dictyostelium discoideum slug cDNA, clone SSB291. 476 e-129 1
(BJ418954) Dictyostelium discoideum cDNA clone:ddv34h13, 5' ... 454 e-123 1
(BJ421263) Dictyostelium discoideum cDNA clone:ddv42b06, 5' ... 230 e-102 2
(BJ439901) Dictyostelium discoideum cDNA clone:ddv42b06, 3' ... 331 5e-86 1
(BJ437539) Dictyostelium discoideum cDNA clone:ddv34h13, 3' ... 105 2e-60 5
(BJ440462) Dictyostelium discoideum cDNA clone:ddv43c23, 3' ... 167 2e-36 1
(AU071357) Dictyostelium discoideum slug cDNA, clone SSB290. 74 1e-20 2
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 34 2e-05 21
(DN144347) 4819_G01_N01 Switchgrass stem cDNA library Panicu... 54 0.007 2
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 34 0.009 15
(AE017308) Mycoplasma mobile 163K complete genome. 34 0.013 21
(CZ544528) SRAA-aad56d09.g1 Strongyloides ratti whole genome... 44 0.014 2
(AX344569) Sequence 20 from Patent WO0200932. 34 0.038 14
(AL844507) Plasmodium falciparum chromosome 8. 36 0.074 18
(CK527088) rswfa0_004056.y1 swf Bombyx mori cDNA, mRNA seque... 48 0.081 2
(AX458578) Sequence 124 from Patent WO0246454. 32 0.17 10
(AM107427) Lutzomyia longipalpis EST clone NSFM-81b02, seque... 50 0.17 2
(AC132065) Rattus norvegicus clone CH230-4H18, WORKING DRAFT... 50 0.26 1
(AC105724) Rattus norvegicus clone CH230-193A14, *** SEQUENC... 50 0.26 1
(AC164786) Bos taurus clone CH240-154P9, *** SEQUENCING IN P... 50 0.26 1
(CO900668) Mddb5026l06.y1 Mddb Malus x domestica cDNA clone ... 50 0.26 1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 38 0.55 16
(AC136676) Rattus norvegicus clone CH230-141C19, *** SEQUENC... 38 0.56 2
(AE017243) Mycoplasma hyopneumoniae J, complete genome. 36 0.60 22
(DX987091) CHORI103-6K15.TJ CHORI103 Schistosoma mansoni gen... 36 0.73 2
(BH204092) Sm1-54N5.TF Sm1 Schistosoma mansoni genomic clone... 36 0.73 2
(BH180509) 016_P_06-21 SmBAC1 Schistosoma mansoni genomic cl... 36 0.73 2
(AL617461) T7 end of clone 016DH03 of library SmBAC1 from st... 36 0.73 2
(BH210531) Sm1-46O13.TF Sm1 Schistosoma mansoni genomic clon... 36 0.73 2
(BH182027) 020_K_19-rev SmBAC1 Schistosoma mansoni genomic c... 36 0.73 2
(AL618977) T3 end of clone 020AF10 of library SmBAC1 from st... 36 0.73 2
(BH187729) 034_F_05-rev SmBAC1 Schistosoma mansoni genomic c... 36 0.74 2
(AL624674) T3 end of clone 034CC03 of library SmBAC1 from st... 36 0.74 2
(DX995807) CHORI103-49C17.TV CHORI103 Schistosoma mansoni ge... 36 0.74 2
(DX985841) CHORI103-4K23.TV CHORI103 Schistosoma mansoni gen... 36 0.74 2
(BH189590) 038_J_11-rev SmBAC1 Schistosoma mansoni genomic c... 36 0.74 2
(AL626528) T3 end of clone 038CE06 of library SmBAC1 from st... 36 0.74 2
(BH200391) Sm1-39D16.TF Sm1 Schistosoma mansoni genomic clon... 36 0.74 2
(BH203231) Sm1-57E13.TF Sm1 Schistosoma mansoni genomic clon... 36 0.74 2
(BH207612) Sm1-57B8.TF Sm1 Schistosoma mansoni genomic clone... 36 0.75 2
(AE017244) Mycoplasma hyopneumoniae 7448, complete genome. 36 0.84 22
(BJ432394) Dictyostelium discoideum cDNA clone:ddv18f16, 3' ... 32 0.90 4
(CQ595530) Sequence 23288 from Patent WO0171042. 48 1.0 1
(CQ595529) Sequence 23287 from Patent WO0171042. 48 1.0 1
(AE014298) Drosophila melanogaster chromosome X, complete se... 48 1.0 1
(AC104625) Drosophila melanogaster X BAC RP98-48G8 (Roswell ... 48 1.0 1
(CU928612) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 1.0 1
(CU914505) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 1.0 1
(AC020474) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 48 1.0 1
(EK334810) 1095467037429 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.0 1
(EK175853) 1095458097108 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.0 1
(EJ083789) 1095460074061 Global-Ocean-Sampling_GS-26-01-01-1... 48 1.0 1
(EJ010946) 1095403706335 Global-Ocean-Sampling_GS-26-01-01-1... 48 1.0 1
(DT610122) ACAG-aab25e11.g1 Hydra_EST_UCI-9 Hydra magnipapil... 48 1.0 1
(DN246032) ACAE-aaa49f18.g1 Hydra EST UCI 5 Hydra magnipapil... 48 1.0 1
(BW771779) Branchiostoma floridae cDNA, gastrula clone:bfga0... 48 1.0 1
(BA000045) Gloeobacter violaceus PCC 7421 DNA, complete genome. 48 1.0 1
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 36 1.1 23
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 32 1.2 12
(BM637050) 17000687563465 A.Gam.ad.cDNA1 Anopheles gambiae c... 46 1.3 2
(BZ155314) CH230-407F19.TVB CHORI-230 Segment 2 Rattus norve... 42 1.3 2
(EJ480074) 1095403463685 Global-Ocean-Sampling_GS-28-01-01-1... 40 1.3 3
(AC004388) Homo Sapiens Chromosome X clone bWXD306, complete... 38 1.3 11
(EB620017) AGENCOURT_56970127 D. grimshawi EST Drosophila gr... 46 1.4 2
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s... 32 1.4 13
(DR127653) 46557577 Drosophila pseudoobscura embryonic cDNA ... 46 1.4 2
(BJ672670) Paralabidochromis chilotes cDNA clone:no111f02. 40 1.4 2
(CZ536965) SRAA-aad06c11.g1 Strongyloides ratti whole genome... 46 1.4 2
(AC176127) Strongylocentrotus purpuratus clone R3-24O11, WOR... 40 1.4 3
(EK556464) 1095516171542 Global-Ocean-Sampling_GS-32-01-01-1... 36 1.5 3
>(X74387) D. discoideum (AX2, AX3) gene for protovillin.
Length = 3064
Score = 1524 bits (769), Expect = 0.0
Identities = 769/769 (100%)
Strand = Plus / Plus
Query: 700 attccaatgttcaaataatagtggtgtattcaaagtatttgaaattcatgatttctctca 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2251 attccaatgttcaaataatagtggtgtattcaaagtatttgaaattcatgatttctctca 2310
Query: 760 agatgatttagattctgatgatgtaatgatcttggataatcaaaaacaaattttcgtttg 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2311 agatgatttagattctgatgatgtaatgatcttggataatcaaaaacaaattttcgtttg 2370
Query: 820 ggttggtaaagaaagtagtgatactgaaaaattaatggcaaatgaaactgctctcgagta 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2371 ggttggtaaagaaagtagtgatactgaaaaattaatggcaaatgaaactgctctcgagta 2430
Query: 880 tattatgaatgctccaactcatagaagagatgatccaatctttaccattcaagatggttt 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2431 tattatgaatgctccaactcatagaagagatgatccaatctttaccattcaagatggttt 2490
Query: 940 tgaaccacatgaattcacttttaatttccatgcttggcaagttaataaaactcaacaaga 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2491 tgaaccacatgaattcacttttaatttccatgcttggcaagttaataaaactcaacaaga 2550
Query: 1000 ttcttataaatcaaaattaagtgctatccttggttcaaacaatagtggtccagcttctcc 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2551 ttcttataaatcaaaattaagtgctatccttggttcaaacaatagtggtccagcttctcc 2610
Query: 1060 aattatgttacctacttctggtgttactttaaaaccaacaacagcagctactccaaaacc 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2611 aattatgttacctacttctggtgttactttaaaaccaacaacagcagctactccaaaacc 2670
Query: 1120 aataactacaccaacagtaactactcctaaaccaataactacaccgacagtagctactct 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2671 aataactacaccaacagtaactactcctaaaccaataactacaccgacagtagctactct 2730
Query: 1180 aaaaacagttacacctgctgtaactttaaagccaacaactgtaactactccatctaaagt 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2731 aaaaacagttacacctgctgtaactttaaagccaacaactgtaactactccatctaaagt 2790
Query: 1240 tgctaccactacaaatacctctactccatcaccaactacaattacaacattctatccatt 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2791 tgctaccactacaaatacctctactccatcaccaactacaattacaacattctatccatt 2850
Query: 1300 atcagttttaaaacaaaaaactaatttaccaaatgatattgataaaagttgtcttcactt 1359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2851 atcagttttaaaacaaaaaactaatttaccaaatgatattgataaaagttgtcttcactt 2910
Query: 1360 gtacctttctgatgaagaatttttatcaacctttaaaatgacaaaagaaatcttccaaaa 1419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2911 gtacctttctgatgaagaatttttatcaacctttaaaatgacaaaagaaatcttccaaaa 2970
Query: 1420 aactcctgcttggaaaactaaacaattacgtgttgataatggattattt 1468
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2971 aactcctgcttggaaaactaaacaattacgtgttgataatggattattt 3019
Score = 656 bits (331), Expect(5) = 0.0
Identities = 331/331 (100%)
Strand = Plus / Plus
Query: 357 gggacaattttatgatggtaatatgaatattaaaacttataatattcatttttggattgg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gggacaattttatgatggtaatatgaatattaaaacttataatattcatttttggattgg 462
Query: 417 tgaattattaataaattcacaagaaacaattaatttttgtaatgatagaattgaagaact 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tgaattattaataaattcacaagaaacaattaatttttgtaatgatagaattgaagaact 522
Query: 477 tgaaagaattattaaatataatcaaaaacaatttgattcagaacaattttatccagaacc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tgaaagaattattaaatataatcaaaaacaatttgattcagaacaattttatccagaacc 582
Query: 537 aattctttatagagaatttcaaggtaaagaaggtgatatttttatgtcatactttaaatc 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 aattctttatagagaatttcaaggtaaagaaggtgatatttttatgtcatactttaaatc 642
Query: 597 ttatggtggtccaagatatgttgcaccattgaaattaacatcagcatcagcagcaattgc 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ttatggtggtccaagatatgttgcaccattgaaattaacatcagcatcagcagcaattgc 702
Query: 657 aacagcagcaaaacaatataaattattccac 687
|||||||||||||||||||||||||||||||
Sbjct: 703 aacagcagcaaaacaatataaattattccac 733
Score = 325 bits (164), Expect(5) = 0.0
Identities = 164/164 (100%)
Strand = Plus / Plus
Query: 195 cagagaaaatttacaacaatcttcatgttttagtcatataaatgaaattggtaaagaaat 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 cagagaaaatttacaacaatcttcatgttttagtcatataaatgaaattggtaaagaaat 210
Query: 255 tggtttagaaatttggaaaattattgatgattcaacaattcaaaaagttccaaaagtgaa 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 tggtttagaaatttggaaaattattgatgattcaacaattcaaaaagttccaaaagtgaa 270
Query: 315 tcattcaacttttgaaactaataaatcttatttattattaatgg 358
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tcattcaacttttgaaactaataaatcttatttattattaatgg 314
Score = 176 bits (89), Expect(5) = 0.0
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 99 ggaaccaccacttgaactaccaacacaaagaaaaagagttatcccatcaaaatttggtat 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 ggaaccaccacttgaactaccaacacaaagaaaaagagttatcccatcaaaatttggtat 114
Query: 159 cctcaaaagaaatgcagaaattgaagcag 187
|||||||||||||||||||||||||||||
Sbjct: 115 cctcaaaagaaatgcagaaattgaagcag 143
Score = 56.0 bits (28), Expect(5) = 0.0
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1098 caacagcagctactccaaaaccaataactacaccaacagtaactactc 1145
|||||| | ||||||| ||||||||||||||||| |||||| ||||||
Sbjct: 2682 caacagtaactactcctaaaccaataactacaccgacagtagctactc 2729
Score = 28.2 bits (14), Expect(5) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 816 tttgggttggtaaa 829
||||||||||||||
Sbjct: 2046 tttgggttggtaaa 2059
Score = 56.0 bits (28), Expect(2) = 0.002
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1131 caacagtaactactcctaaaccaataactacaccgacagtagctactc 1178
|||||| | ||||||| ||||||||||||||||| |||||| ||||||
Sbjct: 2649 caacagcagctactccaaaaccaataactacaccaacagtaactactc 2696
Score = 28.2 bits (14), Expect(2) = 0.002
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 494 ataatcaaaaacaa 507
||||||||||||||
Sbjct: 2346 ataatcaaaaacaa 2359
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,927,842,367
Number of extensions: 123974192
Number of successful extensions: 10790081
Number of sequences better than 10.0: 241
Length of query: 1585
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1561
Effective length of database: 97,308,875,965
Effective search space: 151899155381365
Effective search space used: 151899155381365
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 1 |
| Homology vs Protein |
Query= Contig-U11757-1 (Contig-U11757-1Q) /CSM_Contig/Contig-U11757-1Q.Seq.d
(1585 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(P36418) RecName: Full=Protovillin; AltName: Full=100 kDa actin-... 380 e-104
AY825266_1(AY825266|pid:none) Meleagris gallopavo villin (VIL1) ... 66 4e-09
AK154851_1(AK154851|pid:none) Mus musculus NOD-derived CD11c +ve... 64 1e-08
AF099929_1(AF099929|pid:none) Rattus norvegicus pervin mRNA, com... 64 2e-08
BC111730_1(BC111730|pid:none) Homo sapiens advillin, mRNA (cDNA ... 63 3e-08
(O75366) RecName: Full=Advillin; AltName: Full=p92; &AK314362_1... 63 3e-08
AF041449_1(AF041449|pid:none) Homo sapiens advillin mRNA, comple... 63 3e-08
BC168981_1(BC168981|pid:none) Rattus norvegicus villin 1, mRNA (... 62 6e-08
AY227447_1(AY227447|pid:none) Anableps anableps gelsolin mRNA, c... 61 1e-07
BC135895_1(BC135895|pid:none) Xenopus tropicalis hypothetical pr... 60 2e-07
BC015267_1(BC015267|pid:none) Mus musculus villin 1, mRNA (cDNA ... 60 2e-07
(P09327) RecName: Full=Villin-1; 60 3e-07
AK300965_1(AK300965|pid:none) Homo sapiens cDNA FLJ57609 complet... 60 3e-07
AK313709_1(AK313709|pid:none) Homo sapiens cDNA, FLJ94302, highl... 60 3e-07
BC054960_1(BC054960|pid:none) Xenopus laevis villin 1, mRNA (cDN... 59 4e-07
(Q3SZP7) RecName: Full=Villin-1; &BC102759_1(BC102759|pid:none) 59 5e-07
BT020776_1(BT020776|pid:none) Bos taurus villin 1 (VIL1), mRNA, ... 59 5e-07
DQ453500_1(DQ453500|pid:none) Heliocidaris tuberculata advillin ... 59 7e-07
BC045214_1(BC045214|pid:none) Xenopus laevis similar to villin 1... 59 7e-07
BC074679_1(BC074679|pid:none) Xenopus tropicalis villin 1, mRNA ... 58 9e-07
EU334660_1(EU334660|pid:none) Strongylocentrotus purpuratus vill... 58 9e-07
DQ453502_1(DQ453502|pid:none) Strongylocentrotus purpuratus advi... 58 9e-07
U70047_1(U70047|pid:none) Physarum polycephalum actin-binding pr... 58 1e-06
DQ465376_1(DQ465376|pid:none) Oreochromis mossambicus clone SSH ... 57 1e-06
A07400_1(A07400|pid:none) H.sapiens DNA for villin. &A31642(A31... 57 2e-06
BC074148_1(BC074148|pid:none) Xenopus laevis similar to villin, ... 57 2e-06
BC044966_1(BC044966|pid:none) Xenopus laevis similar to villin, ... 57 2e-06
AF088901_1(AF088901|pid:none) Lilium longiflorum actin bundling ... 56 3e-06
BC074175_1(BC074175|pid:none) Xenopus laevis MGC81993 protein, m... 56 3e-06
DQ453501_1(DQ453501|pid:none) Heliocidaris erythrogramma advilli... 56 3e-06
EF042093_1(EF042093|pid:none) Lilium longiflorum actin-binding p... 56 3e-06
BX927121_2(BX927121|pid:none) Zebrafish DNA sequence from clone ... 55 7e-06
BT055016_1(BT055016|pid:none) Zea mays full-length cDNA clone ZM... 55 7e-06
BC155581_1(BC155581|pid:none) Danio rerio scinderin like a, mRNA... 55 7e-06
BC125898_1(BC125898|pid:none) Danio rerio scinderin like a, mRNA... 55 7e-06
AF175294_1(AF175294|pid:none) Danio rerio gelsolin mRNA, complet... 55 7e-06
BC066531_1(BC066531|pid:none) Danio rerio scinderin like b, mRNA... 55 7e-06
(Q3SX14) RecName: Full=Gelsolin; AltName: Full=Actin-depolymeriz... 54 1e-05
AK151684_1(AK151684|pid:none) Mus musculus bone marrow macrophag... 54 1e-05
AK150359_1(AK150359|pid:none) Mus musculus bone marrow macrophag... 54 1e-05
A32621(A32621) gelsolin, cytosolic - mouse &J04953_1(J04953|pid... 54 1e-05
FJ438495_1(FJ438495|pid:none) Epinephelus coioides scinderin-lik... 53 3e-05
S51363(S51363;S49320) actin modulator protein EWAM - earthworm (... 53 3e-05
AB174009_1(AB174009|pid:none) Macaca fascicularis brain cDNA clo... 53 4e-05
AK299453_1(AK299453|pid:none) Homo sapiens cDNA FLJ55934 complet... 53 4e-05
T23355(T23355) hypothetical protein K06A4.3 - Caenorhabditis ele... 53 4e-05
(P06396) RecName: Full=Gelsolin; AltName: Full=Actin-depolymeriz... 53 4e-05
AK295201_1(AK295201|pid:none) Homo sapiens cDNA FLJ53327 complet... 53 4e-05
AK304675_1(AK304675|pid:none) Homo sapiens cDNA FLJ56212 complet... 53 4e-05
AB170287_1(AB170287|pid:none) Macaca fascicularis brain cDNA clo... 53 4e-05
BC017491_1(BC017491|pid:none) Homo sapiens, Similar to gelsolin ... 53 4e-05
AL513122_9(AL513122|pid:none) Human DNA sequence from clone RP11... 53 4e-05
AK304629_1(AK304629|pid:none) Homo sapiens cDNA FLJ53698 complet... 53 4e-05
AK096280_1(AK096280|pid:none) Homo sapiens cDNA FLJ38961 fis, cl... 53 4e-05
AY893064_1(AY893064|pid:none) Synthetic construct Homo sapiens c... 53 4e-05
BC135025_1(BC135025|pid:none) Danio rerio gelsolin b, mRNA (cDNA... 52 5e-05
AJ621806_1(AJ621806|pid:none) Suberites ficus mRNA for gelsolin ... 52 6e-05
AK318626_1(AK318626|pid:none) Arabidopsis thaliana AT3G57410 mRN... 52 6e-05
AY093052_1(AY093052|pid:none) Arabidopsis thaliana unknown prote... 52 6e-05
(O81645) RecName: Full=Villin-3; &AF081203_1(AF081203|pid:none)... 52 6e-05
BT072437_1(BT072437|pid:none) Salmo salar clone ssal-rgf-525-250... 52 8e-05
AP008209_1498(AP008209|pid:none) Oryza sativa (japonica cultivar... 52 8e-05
FN357417_16(FN357417|pid:none) Schistosoma mansoni genome sequen... 52 8e-05
EU714148_1(EU714148|pid:none) Epinephelus coioides gelsolin a mR... 52 8e-05
E84845(E84845)probable villin 2 [imported] - Arabidopsis thaliana 51 1e-04
BX572629_4(BX572629|pid:none) Zebrafish DNA sequence from clone ... 50 2e-04
BX005064_2(BX005064|pid:none) Zebrafish DNA sequence from clone ... 50 2e-04
BC094991_1(BC094991|pid:none) Danio rerio scinderin like a, mRNA... 50 2e-04
AK300631_1(AK300631|pid:none) Homo sapiens cDNA FLJ56154 complet... 50 2e-04
AX960828_1(AX960828|pid:none) Sequence 6 from Patent EP1371728. 49 4e-04
BC115120_1(BC115120|pid:none) Danio rerio gelsolin a, mRNA (cDNA... 49 4e-04
BC021090_1(BC021090|pid:none) Homo sapiens scinderin, mRNA (cDNA... 49 4e-04
(Q9Y6U3) RecName: Full=Adseverin; AltName: Full=Scinderin; &AK2... 49 4e-04
EU677720_1(EU677720|pid:none) Caenorhabditis brenneri gelsolin m... 49 4e-04
AK027778_1(AK027778|pid:none) Homo sapiens cDNA FLJ14872 fis, cl... 49 4e-04
BC134994_1(BC134994|pid:none) Danio rerio gelsolin a, mRNA (cDNA... 49 4e-04
A31142(A31142;B31142)gelsolin, ovarian - African clawed frog (fr... 49 5e-04
(P14885) RecName: Full=Gelsolin; AltName: Full=Actin-depolymeriz... 49 5e-04
BC084059_1(BC084059|pid:none) Xenopus laevis gelsolin, mRNA (cDN... 49 5e-04
CR859411_1(CR859411|pid:none) Pongo abelii mRNA; cDNA DKFZp469O1... 49 5e-04
AC005281_1(AC005281|pid:none) Homo sapiens PAC clone RP4-722F20 ... 49 7e-04
AK318641_1(AK318641|pid:none) Arabidopsis thaliana AT2G29890 mRN... 49 7e-04
H84701(H84701)probable villin [imported] - Arabidopsis thaliana 49 7e-04
BC090138_1(BC090138|pid:none) Xenopus tropicalis flightless 1 ho... 49 7e-04
(O81643) RecName: Full=Villin-1; &AC007113_2(AC007113|pid:none) 49 7e-04
AF081202_1(AF081202|pid:none) Arabidopsis thaliana villin 2 (VLN... 48 9e-04
AY533218_1(AY533218|pid:none) Chinchilla lanigera plasma gelsoli... 48 0.001
(Q60604) RecName: Full=Adseverin; AltName: Full=Scinderin; AltNa... 47 0.002
BC074479_1(BC074479|pid:none) Xenopus laevis MGC84783 protein, m... 47 0.002
AK136080_1(AK136080|pid:none) Mus musculus in vitro fertilized e... 47 0.002
AK173295_1(AK173295|pid:none) Mus musculus mRNA for mKIAA1905 pr... 47 0.002
(Q27319) RecName: Full=Gelsolin, cytoplasmic; AltName: Full=Acti... 47 0.002
S41391(S41391)gelsolin - American lobster 47 0.002
AK133484_1(AK133484|pid:none) Mus musculus 11 days pregnant adul... 47 0.002
AY324394_1(AY324394|pid:none) Rattus norvegicus scinderin (Scind... 47 0.002
A49674(A49674) flightless-I homolog - human (fragment) &U01184_... 47 0.002
I45832(I45832) scinderin - bovine &X78479_1(X78479|pid:none) 47 0.002
AL137080_26(AL137080|pid:none) Arabidopsis thaliana DNA chromoso... 47 0.002
(Q13045) RecName: Full=Protein flightless-1 homolog; &BC025300_... 47 0.002
(Q28046) RecName: Full=Adseverin; AltName: Full=Scinderin; ... 47 0.002
AK295655_1(AK295655|pid:none) Homo sapiens cDNA FLJ50164 complet... 47 0.002
AK295814_1(AK295814|pid:none) Homo sapiens cDNA FLJ50778 complet... 47 0.002
EU155485_1(EU155485|pid:none) Lumbricus terrestris gelsolin-rela... 47 0.003
EF103444_1(EF103444|pid:none) Haliotis discus discus gelsolin mR... 47 0.003
(O65570) RecName: Full=Villin-4; &AK117296_1(AK117296|pid:none)... 46 0.004
AY380816_1(AY380816|pid:none) Mustela putorius furo smooth muscl... 46 0.004
AJ719674_1(AJ719674|pid:none) Gallus gallus mRNA for hypothetica... 45 0.006
Y13971_1(Y13971|pid:none) Mus musculus mRNA for adseverin(D5). 45 0.006
AB019233_13(AB019233|pid:none) Arabidopsis thaliana genomic DNA,... 45 0.006
CR861279_1(CR861279|pid:none) Pongo abelii mRNA; cDNA DKFZp459O0... 45 0.006
AE014296_486(AE014296|pid:none) Drosophila melanogaster chromoso... 45 0.007
AE014296_485(AE014296|pid:none) Drosophila melanogaster chromoso... 45 0.007
(Q54K81) RecName: Full=Talin-B; 45 0.007
BT031169_1(BT031169|pid:none) Drosophila melanogaster SD07506 fu... 45 0.007
AB023655_1(AB023655|pid:none) Dictyostelium discoideum talB mRNA... 45 0.007
U88311_9(U88311|pid:none) Caenorhabditis elegans cosmid C10H11, ... 45 0.007
AY058783_1(AY058783|pid:none) Drosophila melanogaster SD07766 fu... 45 0.007
AF051850_1(AF051850|pid:none) Homo sapiens supervillin mRNA, com... 45 0.010
AL158167_3(AL158167|pid:none) Human DNA sequence from clone RP11... 45 0.010
AK304720_1(AK304720|pid:none) Homo sapiens cDNA FLJ53284 complet... 45 0.010
BC092440_1(BC092440|pid:none) Homo sapiens supervillin, mRNA (cD... 45 0.010
AK304799_1(AK304799|pid:none) Homo sapiens cDNA FLJ53285 complet... 45 0.010
AL158167_2(AL158167|pid:none) Human DNA sequence from clone RP11... 45 0.010
BC113265_1(BC113265|pid:none) Bos taurus supervillin, mRNA (cDNA... 45 0.010
AE014297_18(AE014297|pid:none) Drosophila melanogaster chromosom... 44 0.013
(Q07171) RecName: Full=Gelsolin; Flags: Precursor; &AE014297_15... 44 0.013
AE014297_14(AE014297|pid:none) Drosophila melanogaster chromosom... 44 0.013
A53909(A53909;S32531) gelsolin, secreted form precursor - fruit ... 44 0.013
CR855138_6(CR855138|pid:none) Oryza sativa genomic DNA, chromoso... 44 0.013
AL513122_6(AL513122|pid:none) Human DNA sequence from clone RP11... 44 0.013
T30330(T30330) gelsolin-related protein GRP125 - slime mold (Dic... 44 0.017
AL773523_9(AL773523|pid:none) Mouse DNA sequence from clone RP23... 44 0.017
AP008214_585(AP008214|pid:none) Oryza sativa (japonica cultivar-... 44 0.017
AK161114_1(AK161114|pid:none) Mus musculus 10 days neonate skin ... 44 0.022
BC004055_1(BC004055|pid:none) Mus musculus supervillin, mRNA (cD... 44 0.022
BC052516_1(BC052516|pid:none) Mus musculus supervillin, mRNA (cD... 44 0.022
AL078464_19(AL078464|pid:none) Arabidopsis thaliana DNA chromoso... 44 0.022
(Q8K4L3) RecName: Full=Supervillin; AltName: Full=Archvillin; Al... 44 0.022
AJ427856_1(AJ427856|pid:none) Dictyostelium discoideum ORF encod... 43 0.028
(Q8WQ85) RecName: Full=Villidin; 43 0.028
BC129018_1(BC129018|pid:none) Xenopus tropicalis supervillin, mR... 43 0.028
AK173040_1(AK173040|pid:none) Mus musculus mRNA for mKIAA0843 pr... 43 0.028
AM392844_1(AM392844|pid:none) Synthetic construct Mus musculus c... 43 0.028
AM393284_1(AM393284|pid:none) Synthetic construct Homo sapiens c... 42 0.048
DQ413174_1(DQ413174|pid:none) Homo sapiens actin-binding LIM pro... 42 0.048
AB075881_1(AB075881|pid:none) Homo sapiens mRNA for putative pro... 42 0.048
AF287264_1(AF287264|pid:none) Mus musculus cytoskeletal actin-mo... 42 0.048
AM393524_1(AM393524|pid:none) Synthetic construct Homo sapiens c... 42 0.048
AM392595_1(AM392595|pid:none) Synthetic construct Homo sapiens c... 42 0.048
AP008210_1797(AP008210|pid:none) Oryza sativa (japonica cultivar... 42 0.048
AM393563_1(AM393563|pid:none) Synthetic construct Homo sapiens c... 42 0.048
(O94929) RecName: Full=Actin-binding LIM protein 3; AltName: Ful... 42 0.048
CR860826_1(CR860826|pid:none) Pongo abelii mRNA; cDNA DKFZp469A2... 42 0.048
AM393655_1(AM393655|pid:none) Synthetic construct Homo sapiens c... 42 0.048
BC085829_1(BC085829|pid:none) Rattus norvegicus flightless I hom... 42 0.048
BC142519_1(BC142519|pid:none) Bos taurus actin binding LIM prote... 42 0.048
AM392930_1(AM392930|pid:none) Synthetic construct Homo sapiens c... 42 0.048
AM392998_1(AM392998|pid:none) Synthetic construct Homo sapiens c... 42 0.048
(Q9JJ28) RecName: Full=Protein flightless-1 homolog; &AF142329_... 42 0.048
BC032282_1(BC032282|pid:none) Mus musculus flightless I homolog ... 42 0.048
AJ577853_1(AJ577853|pid:none) Nicotiana tabacum partial mRNA for... 42 0.063
A14103_1(A14103|pid:none) H.sapiens mRNA for villin. &X04657_1(... 42 0.063
S15011(S15011)mbh1 protein - mouse 42 0.063
AM393559_1(AM393559|pid:none) Synthetic construct Homo sapiens c... 42 0.063
AM393554_1(AM393554|pid:none) Synthetic construct Homo sapiens c... 42 0.063
AM393401_1(AM393401|pid:none) Synthetic construct Homo sapiens c... 42 0.063
(Q865V6) RecName: Full=Macrophage-capping protein; AltName: Full... 42 0.082
AK152818_1(AK152818|pid:none) Mus musculus bone marrow macrophag... 42 0.082
AM393116_1(AM393116|pid:none) Synthetic construct Homo sapiens c... 42 0.082
AK146622_1(AK146622|pid:none) Mus musculus 17 days pregnant adul... 42 0.082
CP000312_392(CP000312|pid:none) Clostridium perfringens SM101, c... 42 0.082
(P24452) RecName: Full=Macrophage-capping protein; AltName: Full... 42 0.082
AK165153_1(AK165153|pid:none) Mus musculus 10 days neonate olfac... 41 0.11
AM393099_1(AM393099|pid:none) Synthetic construct Homo sapiens c... 41 0.11
AM393722_1(AM393722|pid:none) Synthetic construct Homo sapiens c... 41 0.11
AK158744_1(AK158744|pid:none) Mus musculus visual cortex cDNA, R... 41 0.14
CR861194_1(CR861194|pid:none) Pongo abelii mRNA; cDNA DKFZp459C1... 41 0.14
AK055842_1(AK055842|pid:none) Homo sapiens cDNA FLJ31280 fis, cl... 41 0.14
AK313898_1(AK313898|pid:none) Homo sapiens cDNA, FLJ94534, highl... 41 0.14
AF079846_1(AF079846|pid:none) Mus musculus dematin 48 kDa subuni... 41 0.14
X54511_1(X54511|pid:none) M.musculus mbh1 gene for Myc basic mot... 41 0.14
U12026_1(U12026|pid:none) Human actin-regulatory protein Cap-G (... 41 0.14
(Q9WV69) RecName: Full=Dematin; AltName: Full=Erythrocyte membra... 41 0.14
AK149301_1(AK149301|pid:none) Mus musculus adult retina cDNA, RI... 41 0.14
BT066840_1(BT066840|pid:none) Zea mays full-length cDNA clone ZM... 41 0.14
I39062(I39062) dematin 52K chain - human &U28389_1(U28389|pid:n... 41 0.14
AK295452_1(AK295452|pid:none) Homo sapiens cDNA FLJ59528 complet... 41 0.14
AK162866_1(AK162866|pid:none) Mus musculus adult male hypothalam... 41 0.14
AP004657_10(AP004657|pid:none) Oryza sativa Japonica Group genom... 41 0.14
BC129372_1(BC129372|pid:none) Danio rerio zgc:158673, mRNA (cDNA... 40 0.18
BC155652_1(BC155652|pid:none) Danio rerio zgc:172321, mRNA (cDNA... 40 0.18
AM392963_1(AM392963|pid:none) Synthetic construct Homo sapiens c... 40 0.18
BX957309_6(BX957309|pid:none) Zebrafish DNA sequence from clone ... 40 0.18
BC171566_1(BC171566|pid:none) Danio rerio cDNA clone MGC:198293 ... 40 0.18
CR457461_4(CR457461|pid:none) Zebrafish DNA sequence from clone ... 40 0.18
A26237_1(A26237|pid:none) Human villin cDNA. 40 0.24
AK091581_1(AK091581|pid:none) Homo sapiens cDNA FLJ34262 fis, cl... 40 0.24
DQ227765_1(DQ227765|pid:none) Danio rerio supervillin (svil) mRN... 40 0.24
BC055667_1(BC055667|pid:none) Danio rerio supervillin, mRNA (cDN... 40 0.24
FN316954_1(FN316954|pid:none) Schistosoma japonicum isolate Anhu... 40 0.24
AY814387_1(AY814387|pid:none) Schistosoma japonicum SJCHGC01371 ... 40 0.24
BT021858_1(BT021858|pid:none) Bos taurus erythrocyte membrane pr... 40 0.24
NRL(1VIL) Villin (domain one comprising residues 1 126) (also ca... 40 0.24
BT075471_1(BT075471|pid:none) Osmerus mordax clone omor-eva-511-... 40 0.24
FN317120_1(FN317120|pid:none) Schistosoma japonicum isolate Anhu... 40 0.24
AF465625_1(AF465625|pid:none) Dermatophagoides farinae gelsolin-... 40 0.31
(O15195) RecName: Full=Villin-like protein; 39 0.53
A48222(A48222) dematin 48K chain - human &L19713_1(L19713|pid:n... 39 0.53
BC017303_1(BC017303|pid:none) Homo sapiens villin 1, mRNA (cDNA ... 39 0.53
AL834195_1(AL834195|pid:none) Homo sapiens mRNA; cDNA DKFZp761F1... 39 0.53
DQ413176_1(DQ413176|pid:none) Homo sapiens actin-binding LIM pro... 39 0.53
AB058711_1(AB058711|pid:none) Homo sapiens mRNA for KIAA1808 pro... 39 0.53
BC122567_1(BC122567|pid:none) Homo sapiens actin binding LIM pro... 39 0.53
DQ413175_1(DQ413175|pid:none) Mus musculus actin-binding LIM pro... 39 0.53
BC004300_1(BC004300|pid:none) Homo sapiens villin-like, mRNA (cD... 39 0.53
BC000243_1(BC000243|pid:none) Homo sapiens villin-like, mRNA (cD... 39 0.53
DQ413177_1(DQ413177|pid:none) Homo sapiens actin-binding LIM pro... 39 0.53
AK154494_1(AK154494|pid:none) Mus musculus NOD-derived CD11c +ve... 39 0.53
AJ703893_1(AJ703893|pid:none) Rattus norvegicus mRNA for actin b... 39 0.53
AK094798_1(AK094798|pid:none) Homo sapiens cDNA FLJ37479 fis, cl... 39 0.53
JC5708(JC5708)villin-like protein - human 39 0.53
AJ748603_1(AJ748603|pid:none) Mus musculus mRNA for actin bindin... 39 0.53
AF118397_1(AF118397|pid:none) Entamoeba histolytica actin-bindin... 39 0.70
BC073251_1(BC073251|pid:none) Xenopus laevis MGC80597 protein, m... 38 0.91
BC075797_1(BC075797|pid:none) Homo sapiens cDNA clone MGC:87550 ... 38 0.91
S44732(S44732)b0523.5 protein - Caenorhabditis elegans 38 0.91
AK170878_1(AK170878|pid:none) Mus musculus NOD-derived CD11c +ve... 38 1.2
X07066_1(X07066|pid:none) Human gene for gelsolin exon 4. 38 1.2
AM474513_1(AM474513|pid:none) Vitis vinifera contig VV78X109071.... 37 1.6
T20634(T20634) hypothetical protein F09B9.2 - Caenorhabditis ele... 37 1.6
BT041812_1(BT041812|pid:none) Zea mays full-length cDNA clone ZM... 37 1.6
A54832(A54832) villin homolog quail - fruit fly (Drosophila mela... 37 2.0
AY349648_10(AY349648|pid:none) Methanococcus voltae strain PS tr... 37 2.0
AB071136_1(AB071136|pid:none) Echinococcus multilocularis EmAMP ... 37 2.7
AL844505_23(AL844505|pid:none) Plasmodium falciparum 3D7 chromos... 36 3.5
DQ515930_1(DQ515930|pid:none) Bombyx mori strain NB F-actin bund... 36 3.5
AK118185_1(AK118185|pid:none) Arabidopsis thaliana At2g29890 mRN... 36 3.5
CU469464_190(CU469464|pid:none) Candidatus Phytoplasma mali stra... 36 4.5
BC022664_1(BC022664|pid:none) Mus musculus villin-like, mRNA (cD... 35 5.9
(Q91YD6) RecName: Full=Villin-like protein; AltName: Full=EF-6; ... 35 5.9
BC021808_1(BC021808|pid:none) Mus musculus villin-like, mRNA (cD... 35 5.9
BC160730_1(BC160730|pid:none) Xenopus laevis hypothetical protei... 35 7.7
BC081247_1(BC081247|pid:none) Xenopus laevis MGC86227 protein, m... 35 7.7
AY809768_1(AY809768|pid:none) Schistosoma japonicum SJCHGC06031 ... 35 7.7
FN313917_1(FN313917|pid:none) Schistosoma japonicum isolate Anhu... 35 7.7
AL844508_114(AL844508|pid:none) Plasmodium falciparum 3D7 chromo... 35 7.7
>(P36418) RecName: Full=Protovillin; AltName: Full=100 kDa
actin-binding protein; &AC114261_6(AC114261|pid:none)
&S35061(S35061) &X74387_1(X74387|pid:none)
Length = 959
Score = 380 bits (977), Expect = e-104
Identities = 186/197 (94%), Positives = 186/197 (94%)
Frame = +1
Query: 97 MEPPLELPTQRKRVIPSKFGILKRNAEIEAEKNRENLQQSSCFSHINEIGKEIGLEIWKI 276
MEPPLELPTQRKRVIPSKFGILKRNAEIEAEKNRENLQQSSCFSHINEIGKEIGLEIWKI
Sbjct: 1 MEPPLELPTQRKRVIPSKFGILKRNAEIEAEKNRENLQQSSCFSHINEIGKEIGLEIWKI 60
Query: 277 IDDSTIQKVPKVNHSTFETNKSYLLLMGQFYDGNMNIKTYNIHFWIGELLINSQETINFC 456
IDDSTIQKVPKVNHSTFETNKSYLLLMGQFYDGNMNIKTYNIHFWIGELLINSQETINFC
Sbjct: 61 IDDSTIQKVPKVNHSTFETNKSYLLLMGQFYDGNMNIKTYNIHFWIGELLINSQETINFC 120
Query: 457 NDRIEELERIIKYNQKQFDSEQFYPEPILYREFQGKEGDIFMSYFKSYGGPRYVAPLKLX 636
NDRIEELERIIKYNQKQFDSEQFYPEPILYREFQGKEGDIFMSYFKSYGGPRYVAPLKL
Sbjct: 121 NDRIEELERIIKYNQKQFDSEQFYPEPILYREFQGKEGDIFMSYFKSYGGPRYVAPLKLT 180
Query: 637 XXXXXXXXXXKQYKLFH 687
KQYKLFH
Sbjct: 181 SASAAIATAAKQYKLFH 197
Score = 227 bits (578), Expect = 1e-57
Identities = 111/127 (87%), Positives = 111/127 (87%)
Frame = +2
Query: 701 FQCSNNSGVFKVFEIHXXXXXXXXXXXXXXXXNQKQIFVWVGKESSDTEKLMANETALEY 880
FQCSNNSGVFKVFEIH NQKQIFVWVGKESSDTEKLMANETALEY
Sbjct: 704 FQCSNNSGVFKVFEIHDFSQDDLDSDDVMILDNQKQIFVWVGKESSDTEKLMANETALEY 763
Query: 881 IMNAPTHRRDDPIFTIQDGFEPHEFTFNFHAWQVNKTQQDSYKSKLSAILGSNNSGPASP 1060
IMNAPTHRRDDPIFTIQDGFEPHEFTFNFHAWQVNKTQQDSYKSKLSAILGSNNSGPASP
Sbjct: 764 IMNAPTHRRDDPIFTIQDGFEPHEFTFNFHAWQVNKTQQDSYKSKLSAILGSNNSGPASP 823
Query: 1061 IMLPTSG 1081
IMLPTSG
Sbjct: 824 IMLPTSG 830
Score = 127 bits (318), Expect = 1e-27
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +2
Query: 1289 FYPLSVLKQKTNLPNDIDKSCLHLYLSDEEFLSTFKMTKEIFQKTPAWKTKQLRVDNGLF 1468
FYPLSVLKQKTNLPNDIDKSCLHLYLSDEEFLSTFKMTKEIFQKTPAWKTKQLRVDNGLF
Sbjct: 900 FYPLSVLKQKTNLPNDIDKSCLHLYLSDEEFLSTFKMTKEIFQKTPAWKTKQLRVDNGLF 959
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,728,176,717
Number of extensions: 28808337
Number of successful extensions: 79471
Number of sequences better than 10.0: 246
Number of HSP's gapped: 79291
Number of HSP's successfully gapped: 379
Length of query: 528
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 395
Effective length of database: 620,718,517
Effective search space: 245183814215
Effective search space used: 245183814215
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
2 |
| VH (FL, L) |
13 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
3 |
| SH (FL, L) |
1 |
| SF (FL, S) |
0 |
| CH (FL, L) |
2 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |