| Contig-U11706-1 |
| Contig ID |
Contig-U11706-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
866 |
| Chromosome number (1..6, M) |
1 |
| Chromosome length |
4919822 |
| Start point |
2100704 |
| End point |
2099846 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
7 |
| Number of EST |
8 |
| Link to clone list |
U11706 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.26 |
| Homology vs DNA |
Query= Contig-U11706-1 (Contig-U11706-1Q) /CSM_Contig/Contig-U11706-1Q.Seq.d
(876 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ398070) Dictyostelium discoideum cDNA clone:dds10h20, 3' ... 985 0.0 2
(BJ374445) Dictyostelium discoideum cDNA clone:ddc7h21, 3' e... 977 0.0 1
(BJ341862) Dictyostelium discoideum cDNA clone:dda8a16, 3' e... 720 0.0 1
(BJ378304) Dictyostelium discoideum cDNA clone:ddc31b14, 3' ... 563 e-156 1
(BJ441583) Dictyostelium discoideum cDNA clone:ddv47m04, 3' ... 125 7e-70 4
(BJ381092) Dictyostelium discoideum cDNA clone:ddc40g11, 3' ... 76 2e-25 3
(BJ381645) Dictyostelium discoideum cDNA clone:ddc42o04, 3' ... 76 3e-25 3
(BJ364375) Dictyostelium discoideum cDNA clone:ddc31b14, 5' ... 86 3e-12 1
(AE017245) Mycoplasma synoviae 53, complete genome. 40 0.002 16
(M24057) D.discoideum Val-tRNA gene, clone lambda-ValGUU5. 54 0.009 1
(AC178481) Strongylocentrotus purpuratus clone R3-113F05, WO... 46 0.078 2
(EJ956921) 1093018976377 Global-Ocean-Sampling_GS-30-02-01-1... 38 0.13 2
(EJ412209) 1093012157126 Global-Ocean-Sampling_GS-28-01-01-1... 40 0.21 3
(AC231468) Choloepus hoffmanni clone CH281-529O20, WORKING D... 36 0.33 2
(EK421366) 1095515508395 Global-Ocean-Sampling_GS-31-01-01-1... 42 0.48 2
(AM430719) Vitis vinifera contig VV78X164890.7, whole genome... 36 0.49 4
(EK273724) 1095462268350 Global-Ocean-Sampling_GS-31-01-01-1... 40 0.52 2
(AC024744) Caenorhabditis elegans cosmid Y108G3AL, complete ... 48 0.56 1
(CU640440) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.56 1
(AC167854) Bos taurus clone CH240-211H4, WORKING DRAFT SEQUE... 48 0.56 1
(AC006704) Caenorhabditis elegans clone Y108G3a, *** SEQUENC... 48 0.56 1
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 34 0.68 18
(AM465218) Vitis vinifera contig VV78X095684.6, whole genome... 36 0.77 4
(AX344572) Sequence 23 from Patent WO0200932. 44 1.0 11
(AM054493) Isotricha prostoma EST, clone Ip05_D11. 40 1.2 2
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 34 1.4 20
(AC209662) Solanum lycopersicum DNA sequence from clone LE_H... 38 1.7 5
(CP000049) Borrelia turicatae 91E135, complete genome. 40 1.8 15
(ER456727) 1092963872181 Global-Ocean-Sampling_GS-35-01-01-1... 44 1.8 2
(ER420389) 1092963699637 Global-Ocean-Sampling_GS-35-01-01-1... 30 1.9 4
(AL135906) Human DNA sequence from clone RP1-20N11 on chromo... 36 1.9 4
(EJ371213) 1092963724841 Global-Ocean-Sampling_GS-28-01-01-1... 30 2.0 4
(BD453067) Diagnosis of Diseases Associated with tumor suppr... 42 2.1 6
(AX251546) Sequence 514 from Patent WO0168912. 42 2.1 6
(AC022819) Homo sapiens chromosome 15, clone RP11-41I15, com... 40 2.1 6
(CR927456) Zebrafish DNA sequence from clone DKEY-189J19. 46 2.2 1
(CR925751) Zebrafish DNA sequence from clone DKEY-264M23 in ... 46 2.2 1
(BX000470) Zebrafish DNA sequence from clone DKEY-16N16 in l... 46 2.2 1
(BV217751) S233P6407FA4.T0 LabradorRetriever Canis familiari... 46 2.2 1
(AC166800) Mus musculus chromosome 1, clone RP24-260I21, com... 46 2.2 1
(AC100539) Mus musculus chromosome 1, clone RP23-152E3, comp... 46 2.2 1
(CU463046) Medicago truncatula chromosome 5 clone mth4-41d3,... 46 2.2 1
(CT009750) Medicago truncatula chromosome 5 clone mth2-46a17... 46 2.2 1
(AC148719) Medicago truncatula clone mth2-41m14, complete se... 46 2.2 1
(BD453065) Diagnosis of Diseases Associated with tumor suppr... 46 2.2 1
(AX251544) Sequence 512 from Patent WO0168912. 46 2.2 1
(U53333) Caenorhabditis elegans cosmid F36A4, complete seque... 46 2.2 1
(AL355985) Human DNA sequence from clone RP11-98O17 on chrom... 46 2.2 1
(AC213060) Homo sapiens FOSMID clone ABC10-44588800N18 from ... 46 2.2 1
(AL355380) Human DNA sequence *** SEQUENCING CANCELLED *** f... 46 2.2 1
(AC229733) Medicago truncatula clone mth2-58n6, WORKING DRAF... 46 2.2 1
(AC229726) Medicago truncatula clone mth2-193a19, WORKING DR... 46 2.2 1
(AC182020) Sorex araneus clone SA_Ba-165F8, WORKING DRAFT SE... 46 2.2 1
(AC180460) Strongylocentrotus purpuratus clone R3-3102D04, W... 46 2.2 1
(EJ589981) 1092961043248 Global-Ocean-Sampling_GS-29-01-01-1... 46 2.2 1
(ED009542) MUGQ_CH252P094H05Sp6_CP163_025 CHORI-252 Vervet M... 46 2.2 1
(AG176410) Pan troglodytes DNA, clone: RP43-047K08.T7. 46 2.2 1
(EJ215528) 1092351084461 Global-Ocean-Sampling_GS-27-01-01-1... 30 2.4 4
(CR847859) Zebrafish DNA sequence from clone DKEYP-2F4 in li... 36 2.5 3
(ER323906) 1092344197305 Global-Ocean-Sampling_GS-34-01-01-1... 30 2.7 4
(AC152430) Bos taurus clone CH240-5D14, WORKING DRAFT SEQUEN... 38 2.8 5
(AC073090) Homo sapiens BAC clone RP11-328J2 from 7, complet... 34 2.9 7
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 36 3.0 8
(ER451042) 1092963849549 Global-Ocean-Sampling_GS-35-01-01-1... 34 3.2 3
(AC115626) Homo sapiens chromosome 4 clone RP11-685M6, WORKI... 34 3.2 4
(AE014850) Plasmodium falciparum 3D7 chromosome 12, section ... 38 3.6 7
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 32 3.9 15
(AC150501) Bos taurus clone CH240-132N9, WORKING DRAFT SEQUE... 34 4.2 2
(AC218579) Bos taurus clone CH240-311A20, WORKING DRAFT SEQU... 34 4.2 2
(AL805926) Mouse DNA sequence from clone RP24-135N15 on chro... 40 4.3 5
(BX000703) Zebrafish DNA sequence from clone CH211-276I6 in ... 38 4.6 5
(AC115584) Dictyostelium discoideum chromosome 2 map complem... 42 5.0 5
(DU122856) KBrH098G19F Brassica rapa BAC library KBrH Brassi... 42 5.1 2
(DU112961) KBrH099G19F Brassica rapa BAC library KBrH Brassi... 42 5.1 2
(AM188052) Paracentrotus lividus EST, clone MPMGp1172B141Q, ... 32 5.7 2
(EK352203) 1095468011241 Global-Ocean-Sampling_GS-31-01-01-1... 34 6.0 2
(ET769113) CHO_OF556xc23f1.ab1 CHO_OF Nicotiana tabacum geno... 36 6.0 2
(AC005505) Plasmodium falciparum chromosome 12 clone 3D7, **... 38 6.2 6
(AL445528) Human DNA sequence from clone RP11-419N10 on chro... 36 6.4 6
(CU468283) S.lycopersicum DNA sequence from clone SL_MboI-14... 36 6.5 3
(AX344574) Sequence 25 from Patent WO0200932. 32 6.8 12
(CZ974169) 174689 Tomato MboI BAC Library Solanum lycopersic... 34 6.8 2
(AE001272) Lactococcus lactis DPC3147 plasmid pMRC01, comple... 42 6.9 5
(AC193120) Homo sapiens chromosome 12 clone WI2-1396M13, com... 42 7.1 4
(AC230045) Homo sapiens chromosome UNKNOWN clone ABC10-44766... 42 7.1 4
(CU302392) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 7.2 5
(AP001313) Arabidopsis thaliana genomic DNA, chromosome 3, B... 32 8.1 6
(EG471745) AYAQD29TF pooled cDNA populations Arabidopsis tha... 34 8.5 2
(AL844509) Plasmodium falciparum chromosome 13. 36 8.6 14
(BX323831) Zebrafish DNA sequence from clone CH211-12E7 in l... 44 8.8 1
(BX000480) Zebrafish DNA sequence from clone DKEY-14C5 in li... 44 8.8 1
(DQ333351) Choristoneura occidentalis granulovirus, complete... 44 8.8 1
(AF538602) Choristoneura fumiferana granulovirus ubiquitin, ... 44 8.8 1
(CT025575) Mouse DNA sequence from clone RP23-272A7 on chrom... 44 8.8 1
(AC159900) Mus musculus BAC clone RP23-48H10 from chromosome... 44 8.8 1
(AC156634) Mus musculus BAC clone RP24-462L6 from chromosome... 44 8.8 1
(AC148205) Callicebus moloch clone LB5-314H24, complete sequ... 44 8.8 1
(AJ884758) Gigaspora rosea dispersed repeat GrosRE1-T3, clon... 44 8.8 1
(DD010736) Diagnosis of known genetic Parameters within the ... 44 8.8 1
(AL356953) Human DNA sequence from clone RP11-572A16 on chro... 44 8.8 1
>(BJ398070) Dictyostelium discoideum cDNA clone:dds10h20, 3' end,
single read.
Length = 657
Score = 985 bits (497), Expect(2) = 0.0
Identities = 500/501 (99%)
Strand = Plus / Minus
Query: 292 aaattattaaaaatgattgaattttggggtttatggataatttatttctttgctggtggt 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaattattaaaaatgattgaattttggggtttatggataatttatttctttgctggtggt 445
Query: 352 ttaagtattatgtttttaaataatattgcaattatggctgaagcaatgaaagaatcagat 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttaagtattatgtttttaaataatattgcaattatggctgaagcaatgaaagaatcagat 385
Query: 412 tcagtccatagtaatttagttattgttttttcaattggtaatttaattggtagagttgga 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcagtccatagtaatttagttattgttttttcaattggtaatttaattggtagagttgga 325
Query: 472 atgggatttttatcggatttaatatcaaagagagtttcaagattttggtgtgttgtttta 531
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 324 atgggatttttatcggatttaatgtcaaagagagtttcaagattttggtgtgttgtttta 265
Query: 532 tcaagtttagttcttacaataactcatttaatttgtgcttttgaattaaaaccattactt 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcaagtttagttcttacaataactcatttaatttgtgcttttgaattaaaaccattactt 205
Query: 592 tatccagctactatattaactggtattggttatggtggaattgtttcaattatggtttta 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tatccagctactatattaactggtattggttatggtggaattgtttcaattatggtttta 145
Query: 652 ttagcatcattcagatttggcccaagaagatttggtcttaatttcggttttttggcttta 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ttagcatcattcagatttggcccaagaagatttggtcttaatttcggttttttggcttta 85
Query: 712 tcttcagcatctggttctttaatttttagtacagttagtagtaaaatttatgatggcctt 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tcttcagcatctggttctttaatttttagtacagttagtagtaaaatttatgatggcctt 25
Query: 772 tcagaaaattcagttgatagt 792
|||||||||||||||||||||
Sbjct: 24 tcagaaaattcagttgatagt 4
Score = 157 bits (79), Expect(2) = 0.0
Identities = 79/79 (100%)
Strand = Plus / Minus
Query: 215 atcatcacataatcaaaattcaattgatacttctattccaaactttttagatggtaaaag 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 atcatcacataatcaaaattcaattgatacttctattccaaactttttagatggtaaaag 521
Query: 275 agatatttcaggttttaaa 293
|||||||||||||||||||
Sbjct: 520 agatatttcaggttttaaa 502
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,023,642,239
Number of extensions: 66081837
Number of successful extensions: 5876302
Number of sequences better than 10.0: 145
Length of query: 876
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 852
Effective length of database: 97,308,875,965
Effective search space: 82907162322180
Effective search space used: 82907162322180
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.30 |
| Homology vs Protein |
Query= Contig-U11706-1 (Contig-U11706-1Q) /CSM_Contig/Contig-U11706-1Q.Seq.d
(876 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506028_14(AF506028|pid:none) Poncirus trifoliata citrus triste... 86 1e-15
AK101156_1(AK101156|pid:none) Oryza sativa Japonica Group cDNA c... 70 1e-10
AM269999_11(AM269999|pid:none) Aspergillus niger contig An02c004... 69 2e-10
AK228500_1(AK228500|pid:none) Arabidopsis thaliana mRNA for nodu... 69 3e-10
BT022027_1(BT022027|pid:none) Arabidopsis thaliana At2g34355 gen... 69 3e-10
BT061840_1(BT061840|pid:none) Zea mays full-length cDNA clone ZM... 69 3e-10
AP008210_1249(AP008210|pid:none) Oryza sativa (japonica cultivar... 68 5e-10
AL606604_3(AL606604|pid:none) Oryza sativa genomic DNA, chromoso... 68 5e-10
CR855215_2(CR855215|pid:none) Oryza sativa genomic DNA, chromoso... 68 5e-10
AC068602_8(AC068602|pid:none) Genomic sequence for Arabidopsis t... 67 8e-10
AB007650_10(AB007650|pid:none) Arabidopsis thaliana genomic DNA,... 67 1e-09
BT086292_1(BT086292|pid:none) Zea mays full-length cDNA clone ZM... 66 2e-09
AP008210_645(AP008210|pid:none) Oryza sativa (japonica cultivar-... 66 2e-09
BT065360_1(BT065360|pid:none) Zea mays full-length cDNA clone ZM... 65 2e-09
AC010797_25(AC010797|pid:none) Arabidopsis thaliana chromosome I... 65 3e-09
EU963215_1(EU963215|pid:none) Zea mays clone 259231 nodulin-like... 65 3e-09
AY643843_2(AY643843|pid:none) Hordeum vulgare subsp. vulgare clo... 65 3e-09
AF031244_1(AF031244|pid:none) Arabidopsis thaliana nodulin-like ... 65 4e-09
EU835982_2(EU835982|pid:none) Triticum aestivum clone BAC 1067B0... 64 5e-09
CR626934_11(CR626934|pid:none) Triticum aestivum. &CT009735_15(... 64 5e-09
AC018849_14(AC018849|pid:none) Arabidopsis thaliana chromosome 1... 64 7e-09
EU973663_1(EU973663|pid:none) Zea mays clone 403831 nodulin-like... 64 9e-09
AM438530_2(AM438530|pid:none) Vitis vinifera contig VV78X081235.... 64 9e-09
BT087847_1(BT087847|pid:none) Zea mays full-length cDNA clone ZM... 64 9e-09
CR626930_5(CR626930|pid:none) Triticum aestivum. &CR626932_5(CR... 64 9e-09
AK101608_1(AK101608|pid:none) Oryza sativa Japonica Group cDNA c... 63 1e-08
EU835980_5(EU835980|pid:none) Triticum aestivum clone BAC 502E09... 62 3e-08
CR626933_3(CR626933|pid:none) Triticum turgidum. &CT009587_9(CT... 62 3e-08
CU638744_493(CU638744|pid:none) Podospora anserina genomic DNA c... 60 1e-07
EF115006_1(EF115006|pid:none) Triticum turgidum subsp. dicoccoid... 60 1e-07
EF114997_1(EF114997|pid:none) Triticum aestivum strain CRB-INRA-... 59 3e-07
EF114958_1(EF114958|pid:none) Triticum turgidum subsp. dicoccon ... 59 3e-07
EF114969_1(EF114969|pid:none) Triticum turgidum subsp. dicoccoid... 59 3e-07
EF115011_1(EF115011|pid:none) Triticum turgidum subsp. dicoccoid... 59 3e-07
EF115009_1(EF115009|pid:none) Triticum turgidum subsp. dicoccoid... 59 3e-07
EF115004_1(EF115004|pid:none) Triticum turgidum subsp. dicoccoid... 59 3e-07
EF114970_1(EF114970|pid:none) Triticum turgidum subsp. dicoccoid... 59 3e-07
EF114968_1(EF114968|pid:none) Triticum turgidum subsp. dicoccoid... 58 5e-07
AM429072_1(AM429072|pid:none) Vitis vinifera contig VV78X024215.... 58 5e-07
EU954519_1(EU954519|pid:none) Zea mays clone 1469261 nodulin-lik... 57 6e-07
BT004270_1(BT004270|pid:none) Arabidopsis thaliana clone RAFL15-... 57 6e-07
AK066119_1(AK066119|pid:none) Oryza sativa Japonica Group cDNA c... 57 6e-07
AC009325_18(AC009325|pid:none) Arabidopsis thaliana chromosome I... 57 6e-07
AE016796_159(AE016796|pid:none) Vibrio vulnificus CMCP6 chromoso... 57 8e-07
CP000790_1360(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 57 1e-06
BA000032_701(BA000032|pid:none) Vibrio parahaemolyticus RIMD 221... 57 1e-06
CP001089_2603(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 57 1e-06
AM448026_4(AM448026|pid:none) Vitis vinifera contig VV78X197217.... 56 2e-06
EU957503_1(EU957503|pid:none) Zea mays clone 1595631 nodulin-lik... 55 2e-06
AB023037_2(AB023037|pid:none) Arabidopsis thaliana genomic DNA, ... 55 3e-06
AK221645_1(AK221645|pid:none) Arabidopsis thaliana mRNA for nodu... 55 3e-06
BT034399_1(BT034399|pid:none) Zea mays full-length cDNA clone ZM... 55 4e-06
FM954973_1024(FM954973|pid:none) Vibrio splendidus LGP32 chromos... 55 4e-06
AP008218_868(AP008218|pid:none) Oryza sativa (japonica cultivar-... 54 5e-06
AC149131_28(AC149131|pid:none) Medicago truncatula chromosome 7 ... 54 9e-06
CP001154_114(CP001154|pid:none) Laribacter hongkongensis HLHK9, ... 54 9e-06
AE017346_424(AE017346|pid:none) Cryptococcus neoformans var. neo... 53 1e-05
AK099869_1(AK099869|pid:none) Oryza sativa Japonica Group cDNA c... 52 2e-05
A84681(A84681) nodulin-like protein [imported] - Arabidopsis tha... 52 3e-05
AE000782_360(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304,... 52 3e-05
AK072321_1(AK072321|pid:none) Oryza sativa Japonica Group cDNA c... 52 3e-05
AY726670_1(AY726670|pid:none) Glycine max nitrate and chloride t... 51 4e-05
AL079347_19(AL079347|pid:none) Arabidopsis thaliana DNA chromoso... 51 6e-05
AP008217_35(AP008217|pid:none) Oryza sativa (japonica cultivar-g... 50 1e-04
EF147106_1(EF147106|pid:none) Populus trichocarpa clone WS01227_... 50 1e-04
AP008218_31(AP008218|pid:none) Oryza sativa (japonica cultivar-g... 49 2e-04
AE017180_2476(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 49 2e-04
CR382132_596(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 49 2e-04
AC005825_8(AC005825|pid:none) Arabidopsis thaliana chromosome 2 ... 49 3e-04
CP001089_920(CP001089|pid:none) Geobacter lovleyi SZ, complete g... 48 4e-04
BT069244_1(BT069244|pid:none) Zea mays full-length cDNA clone ZM... 48 4e-04
CP000724_3745(CP000724|pid:none) Alkaliphilus metalliredigens QY... 48 5e-04
CP001575_2(CP001575|pid:none) Micromonas sp. RCC299 chromosome 8... 48 5e-04
BT000872_1(BT000872|pid:none) Arabidopsis thaliana clone C104966... 48 5e-04
AL022580_22(AL022580|pid:none) Arabidopsis thaliana DNA chromoso... 48 5e-04
(Q5AXV1) RecName: Full=Probable transporter mch1; 47 8e-04
AY084219_1(AY084219|pid:none) Arabidopsis thaliana clone 100165 ... 47 0.001
DQ295238_19(DQ295238|pid:none) Uncultured marine bacterium Ant4E... 47 0.001
CP000497_497(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 47 0.001
(Q6CGU8) RecName: Full=Probable transporter MCH1; &CR382127_482... 46 0.001
CP000360_3918(CP000360|pid:none) Acidobacteria bacterium Ellin34... 46 0.002
CP000769_1689(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 45 0.002
FN357395_3(FN357395|pid:none) Schistosoma mansoni genome sequenc... 45 0.004
CP000939_1621(CP000939|pid:none) Clostridium botulinum B1 str. O... 45 0.004
CP001083_1636(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 45 0.004
CP000141_1979(CP000141|pid:none) Carboxydothermus hydrogenoforma... 45 0.004
CP000924_1765(CP000924|pid:none) Thermoanaerobacter pseudethanol... 45 0.004
CP000923_420(CP000923|pid:none) Thermoanaerobacter sp. X514, com... 45 0.004
CP001399_359(CP001399|pid:none) Sulfolobus islandicus L.S.2.15, ... 44 0.005
CP001400_334(CP001400|pid:none) Sulfolobus islandicus M.14.25, c... 44 0.005
CP001403_358(CP001403|pid:none) Sulfolobus islandicus Y.G.57.14,... 44 0.005
EU962372_1(EU962372|pid:none) Zea mays clone 242143 unknown mRNA. 44 0.005
AP011115_1546(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 44 0.007
CP000728_1584(CP000728|pid:none) Clostridium botulinum F str. La... 44 0.007
AM412317_1596(AM412317|pid:none) Clostridium botulinum A str. AT... 44 0.007
AM448247_2(AM448247|pid:none) Vitis vinifera contig VV78X054715.... 44 0.009
CP001576_62(CP001576|pid:none) Micromonas sp. RCC299 chromosome ... 44 0.009
FM992691_373(FM992691|pid:none) Candida dubliniensis CD36 chromo... 44 0.009
CP001404_2418(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51... 43 0.012
AB259663_11(AB259663|pid:none) Streptomyces griseus orfA, griT, ... 43 0.012
AM946015_1320(AM946015|pid:none) Streptococcus uberis 0140J comp... 43 0.016
AP006725_4760(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 43 0.016
CR382139_717(CR382139|pid:none) Debaryomyces hansenii strain CBS... 42 0.021
AC096673_5(AC096673|pid:none) Trypanosoma brucei chromosome 3 cl... 42 0.027
AE014075_4270(AE014075|pid:none) Escherichia coli CFT073, comple... 42 0.027
CU928162_4122(CU928162|pid:none) Escherichia coli ED1a chromosom... 42 0.027
CU651637_3435(CU651637|pid:none) Escherichia coli LF82 chromosom... 42 0.027
AP009389_1574(AP009389|pid:none) Pelotomaculum thermopropionicum... 42 0.027
CT005250_66(CT005250|pid:none) Leishmania major strain Friedlin,... 42 0.036
CP000480_2228(CP000480|pid:none) Mycobacterium smegmatis str. MC... 42 0.036
BT061060_1(BT061060|pid:none) Zea mays full-length cDNA clone ZM... 42 0.036
CP000769_849(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, co... 42 0.036
AP007151_254(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 42 0.036
CU928164_4023(CU928164|pid:none) Escherichia coli IAI39 chromoso... 42 0.036
CP000970_3716(CP000970|pid:none) Escherichia coli SMS-3-5, compl... 42 0.036
CP000822_4861(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 41 0.046
CP000431_1843(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 41 0.046
CP001095_33(CP001095|pid:none) Bifidobacterium longum subsp. inf... 41 0.061
AC087412_5(AC087412|pid:none) Oryza sativa chromosome 3 BAC OSJN... 41 0.061
CU928163_3973(CU928163|pid:none) Escherichia coli UMN026 chromos... 41 0.061
CU928145_3906(CU928145|pid:none) Escherichia coli 55989 chromoso... 41 0.061
EU893390_1(EU893390|pid:none) Escherichia coli strain 493/89 put... 41 0.061
AP009240_3820(AP009240|pid:none) Escherichia coli SE11 DNA, comp... 41 0.061
(P37662) RecName: Full=Inner membrane protein yhjX; &AP009048_3... 41 0.061
AM427628_1(AM427628|pid:none) Vitis vinifera contig VV78X114147.... 41 0.061
AE006641_1956(AE006641|pid:none) Sulfolobus solfataricus P2, com... 40 0.079
(Q4WVT3) RecName: Full=Probable transporter mch1; 40 0.079
FN392322_682(FN392322|pid:none) Pichia pastoris GS115 chromosome... 40 0.10
AE016817_678(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 40 0.10
CP000301_2450(CP000301|pid:none) Rhodopseudomonas palustris BisB... 40 0.10
CP001359_863(CP001359|pid:none) Anaeromyxobacter dehalogenans 2C... 40 0.13
CP001131_861(CP001131|pid:none) Anaeromyxobacter sp. K, complete... 40 0.13
(Q03795) RecName: Full=Uncharacterized membrane protein YMR155W;... 39 0.18
AM494948_44(AM494948|pid:none) Leishmania braziliensis chromosom... 39 0.18
CP000771_1385(CP000771|pid:none) Fervidobacterium nodosum Rt17-B... 39 0.18
AM502229_67(AM502229|pid:none) Leishmania infantum chromosome 11. 39 0.23
AK060613_1(AK060613|pid:none) Oryza sativa Japonica Group cDNA c... 39 0.23
CP001146_351(CP001146|pid:none) Dictyoglomus thermophilum H-6-12... 39 0.30
CP001291_2852(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 39 0.30
CP000783_4058(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 39 0.30
CR382137_911(CR382137|pid:none) Debaryomyces hansenii strain CBS... 39 0.30
AP007167_461(AP007167|pid:none) Aspergillus oryzae RIB40 genomic... 38 0.51
AE017283_875(AE017283|pid:none) Propionibacterium acnes KPA17120... 38 0.51
CP001157_4070(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 38 0.51
AM295007_711(AM295007|pid:none) Streptococcus pyogenes Manfredo ... 38 0.51
AP007175_417(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 37 0.67
CP001390_1258(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 37 0.67
AC1346(AC1346) antiporter proteins homolog lmo2171 [imported] - ... 37 0.67
CP000270_12(CP000270|pid:none) Burkholderia xenovorans LB400 chr... 37 0.67
CP000560_745(CP000560|pid:none) Bacillus amyloliquefaciens FZB42... 37 0.67
CP000702_1174(CP000702|pid:none) Thermotoga petrophila RKU-1, co... 37 0.87
CP001032_4557(CP001032|pid:none) Opitutus terrae PB90-1, complet... 37 0.87
AC116984_163(AC116984|pid:none) Dictyostelium discoideum chromos... 37 0.87
AC096673_6(AC096673|pid:none) Trypanosoma brucei chromosome 3 cl... 37 0.87
CR380959_420(CR380959|pid:none) Candida glabrata strain CBS138 c... 37 0.87
AL132898_7(AL132898|pid:none) Caenorhabditis elegans YAC Y59A8B,... 37 0.87
AM920436_795(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 37 0.87
AE000512_1576(AE000512|pid:none) Thermotoga maritima MSB8, compl... 37 0.87
CP000252_695(CP000252|pid:none) Syntrophus aciditrophicus SB, co... 37 0.87
EF421860_1(EF421860|pid:none) Lactobacillus reuteri strain ATCC ... 37 1.1
CP000444_56(CP000444|pid:none) Shewanella sp. MR-7, complete gen... 37 1.1
AC096673_4(AC096673|pid:none) Trypanosoma brucei chromosome 3 cl... 37 1.1
M82963_1(M82963|pid:none) Saccharomyces cerevisiae hexose transp... 37 1.1
CP000644_58(CP000644|pid:none) Aeromonas salmonicida subsp. salm... 37 1.1
CP000698_2496(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 37 1.1
CP001283_2962(CP001283|pid:none) Bacillus cereus AH820, complete... 37 1.1
CP000891_61(CP000891|pid:none) Shewanella baltica OS195, complet... 37 1.1
AJ875406_1(AJ875406|pid:none) Candida intermedia mRNA for glucos... 37 1.1
AM494948_109(AM494948|pid:none) Leishmania braziliensis chromoso... 37 1.1
CP000502_344(CP000502|pid:none) Pichia stipitis CBS 6054 chromos... 37 1.1
CP000563_4226(CP000563|pid:none) Shewanella baltica OS155, compl... 36 1.5
AP011115_753(AP011115|pid:none) Rhodococcus opacus B4 DNA, compl... 36 1.5
AM920431_1001(AM920431|pid:none) Penicillium chrysogenum Wiscons... 36 1.5
CP000960_209(CP000960|pid:none) Burkholderia cenocepacia MC0-3 c... 36 1.5
AE009949_1116(AE009949|pid:none) Streptococcus pyogenes MGAS8232... 36 1.5
CP001488_1504(CP001488|pid:none) Brucella melitensis ATCC 23457 ... 36 1.9
CP000379_2219(CP000379|pid:none) Burkholderia cenocepacia AU 105... 36 1.9
CP001634_43(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, com... 36 1.9
FM992691_540(FM992691|pid:none) Candida dubliniensis CD36 chromo... 36 1.9
AP011115_5462(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 36 1.9
CP000026_274(CP000026|pid:none) Salmonella enterica subsp. enter... 36 1.9
CP000477_503(CP000477|pid:none) Methanosaeta thermophila PT, com... 36 1.9
CP000744_6006(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 36 1.9
AE008917_444(AE008917|pid:none) Brucella melitensis 16M chromoso... 36 1.9
CP001341_1036(CP001341|pid:none) Arthrobacter chlorophenolicus A... 36 1.9
U89712_4(U89712|pid:none) Rhodococcus globerulus hpp operon, 3-(... 36 1.9
AY598344_1(AY598344|pid:none) Torulaspora delbrueckii low-affini... 36 1.9
FM209186_5706(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 36 1.9
AE017223_1464(AE017223|pid:none) Brucella abortus biovar 1 str. ... 36 1.9
CP000967_553(CP000967|pid:none) Xanthomonas oryzae pv. oryzae PX... 36 1.9
CP000708_1397(CP000708|pid:none) Brucella ovis ATCC 25840 chromo... 36 1.9
AE016818_725(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 36 1.9
CU207211_2393(CU207211|pid:none) Herminiimonas arsenicoxydans ch... 35 2.5
CP000431_1018(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 35 2.5
CP001601_953(CP001601|pid:none) Corynebacterium aurimucosum ATCC... 35 2.5
CP001175_366(CP001175|pid:none) Listeria monocytogenes HCC23, co... 35 2.5
AE014291_1526(AE014291|pid:none) Brucella suis 1330 chromosome I... 35 2.5
CP000705_1060(CP000705|pid:none) Lactobacillus reuteri DSM 20016... 35 2.5
AE017262_2180(AE017262|pid:none) Listeria monocytogenes str. 4b ... 35 2.5
AP007281_1026(AP007281|pid:none) Lactobacillus reuteri JCM 1112 ... 35 2.5
AM920430_3(AM920430|pid:none) Penicillium chrysogenum Wisconsin ... 35 2.5
CP000812_1210(CP000812|pid:none) Thermotoga lettingae TMO, compl... 35 2.5
CP000261_1097(CP000261|pid:none) Streptococcus pyogenes MGAS2096... 35 2.5
AK072288_1(AK072288|pid:none) Oryza sativa Japonica Group cDNA c... 35 2.5
CP000262_1193(CP000262|pid:none) Streptococcus pyogenes MGAS1075... 35 2.5
AF1716(AF1716) antiporter protein homolog lin2274 [imported] - L... 35 2.5
AE017283_1071(AE017283|pid:none) Propionibacterium acnes KPA1712... 35 2.5
AE016827_2284(AE016827|pid:none) Mannheimia succiniciproducens M... 35 2.5
CP000872_1525(CP000872|pid:none) Brucella canis ATCC 23365 chrom... 35 2.5
CP000758_1578(CP000758|pid:none) Ochrobactrum anthropi ATCC 4918... 35 2.5
CP000561_1648(CP000561|pid:none) Pyrobaculum calidifontis JCM 11... 35 2.5
CP000509_748(CP000509|pid:none) Nocardioides sp. JS614, complete... 35 3.3
AE013598_4131(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 35 3.3
AM933173_3523(AM933173|pid:none) Salmonella enterica subsp. ente... 35 3.3
AM920427_823(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 35 3.3
AP007155_1335(AP007155|pid:none) Aspergillus oryzae RIB40 genomi... 35 3.3
EU196742_1(EU196742|pid:none) Saccharomyces cerevisiae isolate U... 35 3.3
CP001131_3025(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 35 3.3
CP000822_5(CP000822|pid:none) Citrobacter koseri ATCC BAA-895, c... 35 3.3
AP008229_3990(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M... 35 3.3
(P32465) RecName: Full=Low-affinity glucose transporter HXT1; &... 35 3.3
AE014074_1020(AE014074|pid:none) Streptococcus pyogenes MGAS315,... 35 3.3
AE017220_2569(AE017220|pid:none) Salmonella enterica subsp. ente... 35 3.3
AB114446_12(AB114446|pid:none) Coleonyx variegatus mitochondrial... 35 3.3
CP000653_30(CP000653|pid:none) Enterobacter sp. 638, complete ge... 35 3.3
AM295007_751(AM295007|pid:none) Streptococcus pyogenes Manfredo ... 35 3.3
AE004092_1028(AE004092|pid:none) Streptococcus pyogenes M1 GAS, ... 35 3.3
CP001359_3128(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 35 3.3
AM260480_1948(AM260480|pid:none) Ralstonia eutropha H16 chromoso... 35 3.3
CP000857_1046(CP000857|pid:none) Salmonella enterica subsp. ente... 35 3.3
FM992690_734(FM992690|pid:none) Candida dubliniensis CD36 chromo... 35 3.3
AP008937_1109(AP008937|pid:none) Lactobacillus fermentum IFO 395... 35 4.3
CP001614_653(CP001614|pid:none) Teredinibacter turnerae T7901, c... 35 4.3
CP000964_31(CP000964|pid:none) Klebsiella pneumoniae 342, comple... 35 4.3
CP000419_1183(CP000419|pid:none) Streptococcus thermophilus LMD-... 35 4.3
AP006725_4933(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 35 4.3
CU928170_433(CU928170|pid:none) Kluyveromyces thermotolerans str... 35 4.3
AM269994_8(AM269994|pid:none) Aspergillus niger contig An01c0480... 35 4.3
BA000030_1829(BA000030|pid:none) Streptomyces avermitilis MA-468... 35 4.3
AM946015_1205(AM946015|pid:none) Streptococcus uberis 0140J comp... 35 4.3
CT005252_169(CT005252|pid:none) Leishmania major strain Friedlin... 35 4.3
AD2736(AD2736) MFS permease [imported] - Agrobacterium tumefacie... 35 4.3
AP007159_36(AP007159|pid:none) Aspergillus oryzae RIB40 genomic ... 35 4.3
AC120505_6(AC120505|pid:none) Oryza sativa chromosome 3 BAC OSJN... 35 4.3
FN392322_348(FN392322|pid:none) Pichia pastoris GS115 chromosome... 34 5.7
CU928158_1575(CU928158|pid:none) Escherichia fergusonii ATCC 354... 34 5.7
AP008230_2495(AP008230|pid:none) Desulfitobacterium hafniense Y5... 34 5.7
AY007504_2(AY007504|pid:none) Streptococcus mitis strain SF100 P... 34 5.7
CP001146_419(CP001146|pid:none) Dictyoglomus thermophilum H-6-12... 34 5.7
CP000462_64(CP000462|pid:none) Aeromonas hydrophila subsp. hydro... 34 5.7
AY944685_4(AY944685|pid:none) Pseudomonas reinekei strain MT1 sa... 34 5.7
CP000411_799(CP000411|pid:none) Oenococcus oeni PSU-1, complete ... 34 5.7
CP000499_258(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 34 5.7
CP000943_3273(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 34 5.7
CP001196_2670(CP001196|pid:none) Oligotropha carboxidovorans OM5... 34 5.7
CP000854_4118(CP000854|pid:none) Mycobacterium marinum M, comple... 34 5.7
CP000502_121(CP000502|pid:none) Pichia stipitis CBS 6054 chromos... 34 5.7
AE016825_1769(AE016825|pid:none) Chromobacterium violaceum ATCC ... 34 5.7
CP000091_202(CP000091|pid:none) Ralstonia eutropha JMP134 chromo... 34 5.7
CP001503_399(CP001503|pid:none) Burkholderia glumae BGR1 chromos... 34 5.7
FM992695_855(FM992695|pid:none) Candida dubliniensis CD36 chromo... 34 5.7
CP000023_1331(CP000023|pid:none) Streptococcus thermophilus LMG ... 34 5.7
CP000323_1254(CP000323|pid:none) Psychrobacter cryohalolentis K5... 34 5.7
CP000575_1060(CP000575|pid:none) Staphylothermus marinus F1, com... 34 5.7
EU196735_1(EU196735|pid:none) Saccharomyces cerevisiae isolate U... 34 5.7
AP011115_5151(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 34 5.7
CP000920_1475(CP000920|pid:none) Streptococcus pneumoniae P1031,... 34 7.4
CP001069_90(CP001069|pid:none) Ralstonia pickettii 12J chromosom... 34 7.4
AM398681_436(AM398681|pid:none) Flavobacterium psychrophilum JIP... 34 7.4
AM747721_2800(AM747721|pid:none) Burkholderia cenocepacia J2315 ... 34 7.4
AE005672_1499(AE005672|pid:none) Streptococcus pneumoniae TIGR4,... 34 7.4
CP000077_1058(CP000077|pid:none) Sulfolobus acidocaldarius DSM 6... 34 7.4
CP000490_1385(CP000490|pid:none) Paracoccus denitrificans PD1222... 34 7.4
CP000444_3497(CP000444|pid:none) Shewanella sp. MR-7, complete g... 34 7.4
CP000561_420(CP000561|pid:none) Pyrobaculum calidifontis JCM 115... 34 7.4
AM236085_306(AM236085|pid:none) Rhizobium leguminosarum bv. vici... 34 7.4
AB062418_1(AB062418|pid:none) Homo sapiens ust3 mRNA for hUST3, ... 34 7.4
AK074246_1(AK074246|pid:none) Homo sapiens cDNA FLJ23666 fis, cl... 34 7.4
CP000227_2297(CP000227|pid:none) Bacillus cereus Q1, complete ge... 34 7.4
CP000699_1544(CP000699|pid:none) Sphingomonas wittichii RW1, com... 34 7.4
CP000909_3438(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 34 7.4
CU458896_2958(CU458896|pid:none) Mycobacterium abscessus chromos... 34 7.4
(Q8IVM8) RecName: Full=Solute carrier family 22 member 9; AltNam... 34 7.4
CP000910_194(CP000910|pid:none) Renibacterium salmoninarum ATCC ... 34 7.4
CP001321_1913(CP001321|pid:none) Haemophilus parasuis SH0165, co... 34 7.4
Z68215_3(Z68215|pid:none) Caenorhabditis elegans Cosmid C53B4, c... 34 7.4
CP001186_5431(CP001186|pid:none) Bacillus cereus G9842, complete... 34 7.4
CP000919_1416(CP000919|pid:none) Streptococcus pneumoniae JJA, c... 34 7.4
CP000446_506(CP000446|pid:none) Shewanella sp. MR-4, complete ge... 34 7.4
CU928169_112(CU928169|pid:none) Kluyveromyces thermotolerans str... 34 7.4
CP000943_2837(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 33 9.7
CP000414_149(CP000414|pid:none) Leuconostoc mesenteroides subsp.... 33 9.7
CP000353_365(CP000353|pid:none) Ralstonia metallidurans CH34 meg... 33 9.7
AX066279_1(AX066279|pid:none) Sequence 183 from Patent WO0100804. 33 9.7
CP000863_236(CP000863|pid:none) Acinetobacter baumannii ACICU, c... 33 9.7
CP000390_2881(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 33 9.7
CP000270_3289(CP000270|pid:none) Burkholderia xenovorans LB400 c... 33 9.7
AP008230_4733(AP008230|pid:none) Desulfitobacterium hafniense Y5... 33 9.7
CP001176_2296(CP001176|pid:none) Bacillus cereus B4264, complete... 33 9.7
CP001615_1018(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 33 9.7
CP000829_1001(CP000829|pid:none) Streptococcus pyogenes NZ131, c... 33 9.7
AJ344068_105(AJ344068|pid:none) Pseudomonas putida plasmid pWW0 ... 33 9.7
CP000323_400(CP000323|pid:none) Psychrobacter cryohalolentis K5,... 33 9.7
CP000946_32(CP000946|pid:none) Escherichia coli ATCC 8739, compl... 33 9.7
BA000026_123(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c... 33 9.7
(Q5RC45) RecName: Full=Solute carrier family 22 member 24; &CR8... 33 9.7
CP000884_3183(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 33 9.7
CP000473_4297(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 33 9.7
AE017340_630(AE017340|pid:none) Idiomarina loihiensis L2TR, comp... 33 9.7
AP011115_4520(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 33 9.7
CP001182_253(CP001182|pid:none) Acinetobacter baumannii AB0057, ... 33 9.7
AP009044_1166(AP009044|pid:none) Corynebacterium glutamicum R DN... 33 9.7
AX066277_1(AX066277|pid:none) Sequence 181 from Patent WO0100804... 33 9.7
CP000539_3331(CP000539|pid:none) Acidovorax sp. JS42, complete g... 33 9.7
AE007317_1440(AE007317|pid:none) Streptococcus pneumoniae R6, co... 33 9.7
(O52213) RecName: Full=Lipoprotein signal peptidase; EC... 33 9.7
>AF506028_14(AF506028|pid:none) Poncirus trifoliata citrus tristeza
virus resistance gene locus, complete sequence.
Length = 564
Score = 86.3 bits (212), Expect = 1e-15
Identities = 58/186 (31%), Positives = 92/186 (49%), Gaps = 3/186 (1%)
Frame = +1
Query: 274 EIFQVLKLLKMIEFWGLWIIYFFAGGLSIMFLNNIAIMAEAMKESDSVHSNLVIVFSIGN 453
E F++ + +FW LW +YF G + LNN+A + A+ +D+ + L+ +FS+ N
Sbjct: 337 EDFKLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVNDT--TELLCLFSLCN 394
Query: 454 LIGRVGMGFLSD--LISKRVSRFWCVVLSSLVLTITHLICAFELKPLLYPATILTGIGYG 627
GR+G G LS+ + SK + R + + +++ +T L+ A L LY ATIL G+ G
Sbjct: 395 FAGRLGSGVLSEHYVRSKAIPRTVWITCTHIMMILTFLLYASALSGTLYAATILLGVCCG 454
Query: 628 GIVSIMVLLASFRFGPRRFGL-NXXXXXXXXXXXXXXXXTVSSKIYDGLSENSVDSKXYG 804
I S+MV AS FG + FGL ++ K+YD + S G
Sbjct: 455 VIYSLMVPTASELFGLKHFGLIYNFILLGNPIGALLFSGLLAGKLYDAEATKQGSSTCIG 514
Query: 805 NHCFEV 822
CF +
Sbjct: 515 AECFRL 520
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 890,915,107
Number of extensions: 14256966
Number of successful extensions: 37237
Number of sequences better than 10.0: 316
Number of HSP's gapped: 37151
Number of HSP's successfully gapped: 317
Length of query: 292
Length of database: 1,051,180,864
Length adjustment: 127
Effective length of query: 165
Effective length of database: 640,137,871
Effective search space: 105622748715
Effective search space used: 105622748715
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
1 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
1 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
1 |
| CH (FL, L) |
3 |
| CF (FL, S) |
1 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |