Contig-U11701-1
Contig ID Contig-U11701-1
Contig update 2002.12.18
Contig sequence
>Contig-U11701-1 (Contig-U11701-1Q) /CSM_Contig/Contig-U11701-1Q.Seq.d
ATAACAAAAATTATACACACAAACACCCAATCTTTTATTCCGCTTAATTA
TAAAGAATTATTATAAATAATTAATAAAGGGTATTTTTTATTTTTAAAAA
TAGAAAAATTAAATACTCAAGAATGGATGTAAAATATATTATCAATAAAG
ATCAATTGCACCAAGCCAGAAATAGTGCACTCCACGCTCACGAAAAGTAT
TATAAAGACTTTAGTCAATTATTAAAAACAAATATTAATAATAGACCAGT
GATTGATATGGCTAGTGATGAACATAAAGCCAAAACACATAGAGATGCGA
TAGAAGTTTGTAAGATGGGAGTTTTAGATGTTAGAGTTATTCAGAAAGAT
CCAAAGATATTCTTGTCCTATTTAACGAGTTTATCAAGTTGTGATATGTC
ATTGATGGCTAAATTAGTCATTCATTTCCAATTATTTGGTGGTACAATCT
TAGAGTTGGGTACAGAAGAACACCATAATAAATACTTTCCAGATATTAAA
ACCATGAGAATCGTTGGTGGTTTCGGTATGACTGAAATGGGACATGGTTC
AAATGTTAGACAAATTGAAACAACAGCTGAATATGACCATACTACAAAAG
AATTTATAATTAATTCACCAACTCGTTCAAGTACTAAATTTTGGATTGGT
AATATGGCAAAATATGGTACACATATTGTTTTATTTTGTAGATTAATTTA
TAAAGGTGAAGATAAAGGTGTACATGGTATAGTTACACAAATTAGAGATT
TAGATAGTAAAAATGTATTTCCAGGTATTGAAATTGGTGATTGTGGTCCA
A----------ATAGAAATGAAATGGATATTTTTCAAACAGCAGAGGGTG
ATGGAGCAGTATTATATCAACAATTGGCTAAATTTTTATTATCAGAATAT
AAGAAATGGTATAAGAAAGAAGGTGTTACAGGATATATAATTAAAGAGGT
TCAAACTTTTTTAGCAACTAGTAATCCAATGTATACTCATACTAGATCAA
TTCCATATATTCTATCGAATGAATTTCATCATCATGCATTCCTTTATAGA
TTTGAACGTATTCGTTCAACTGTAATCGAGAAACTTAGTCATTCAAAATC
AAAGAAATTGACATTCCTTCAATCTTGGAATGATTCACTACTATACATCA
TAGATATGGCAAAGGCTTATTCTCATCTTTACATTTTAGAACAAAGTCAT
CTAGCAATTAGAAGATGTCAAGATCCTTCAACAAGACATTTACTCAATGA
TTTGATTAAACTATATGCTCTATCAAATATTGAACAAGATTTTGCTTTCT
TTAGAAATTGTAATTTCTTATCCTCTGGTAAAGCATTTGCAATATCTGAT
GCAATCAAAGAACTATGTATTGGTATTAAACCTTATGCACTTCAAATCAT
TAATTCTGATTATAACATTTTAATTGATCCACTCTTAAATATTCCTTTAG
CAAATTTGGATGGTGATTATATTAATCATATGGCTGATTGTGTTGGTGTT
CCAAAATCAAATTTATAAATAATTAAAATAATTAATAATTAATAATAATA
ATAATAATAATAAAAATAATAAGTCATTTTAAAAATGATATGCGGTTTTA
TATCAAATGAATATAAACATTTGGTTTATAATTTAATAATAAAAAATAAA
TAAATAAGAAAAAAAATTAATAAATAAATTAAAAATTTTAAAAAAA

Gap gap included
Contig length 1686
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 62823
End point 64511
Strand (PLUS/MINUS) PLUS
Number of clones 10
Number of EST 15
Link to clone list U11701
List of clone(s)

est1=CHG861F,1,590
est2=CHE779F,20,680
est3=CHI334F,20,640
est4=CHH133F,55,586
est5=SLH509F,81,601
est6=CHP742F,184,801
est7=SSH291F,802,1132
est8=CHI334Z,821,1624
est9=VHI151Z,869,1495
est10=VHB344Z,872,1520
est11=CHG861Z,877,1589
est12=SSE273E,894,1686
est13=CHP742Z,946,1654
est14=CHH133Z,958,1674
est15=CHE779Z,973,1673
Translated Amino Acid sequence
nknythkhpifysa*l*riiinn**RVFFIFKNRKIKYSRMDVKYIINKDQLHQARNSAL
HAHEKYYKDFSQLLKTNINNRPVIDMASDEHKAKTHRDAIEVCKMGVLDVRVIQKDPKIF
LSYLTSLSSCDMSLMAKLVIHFQLFGGTILELGTEEHHNKYFPDIKTMRIVGGFGMTEMG
HGSNVRQIETTAEYDHTTKEFIINSPTRSSTKFWIGNMAKYGTHIVLFCRLIYKGEDKGV
HGIVTQIRDLDSKNVFPGIEIGDCGP---

---RNEMDIFQTAEGDGAVLYQQLAKFLLSEYKKWYKKEGVTGYIIKEVQTFLATSNPMY
THTRSIPYILSNEFHHHAFLYRFERIRSTVIEKLSHSKSKKLTFLQSWNDSLLYIIDMAK
AYSHLYILEQSHLAIRRCQDPSTRHLLNDLIKLYALSNIEQDFAFFRNCNFLSSGKAFAI
SDAIKELCIGIKPYALQIINSDYNILIDPLLNIPLANLDGDYINHMADCVGVPKSNL*ii
kiinn********k**vilkmicgfisneykhlvynliiknk*irkkink*iknfkk


Translated Amino Acid sequence (All Frames)
Frame A:
itkiihtntqsfiplnykell*iinkgyflflkieklntqewm*nilsikinctkpeivh
stltksiiktlvny*kqiliidq*liwlvmnikpkhiemr*kfvrwef*mlelfrkiqry
scpi*rvyqvvich*wln*sfisnylvvqs*swvqkntiintfqilkp*eslvvsv*lkw
dmvqmldklkqqlnmtilqknl*lihqlvqvlnfglviwqnmvhilfyfvd*fikvkikv
ymv*lhklei*ivkmyfqvlklvivvq---

---iemkwiffkqqrvmeqyyinnwlnfyyqnirngirkkvlqdi*lkrfklf*qlviqc
ilildqfhifyrmnfiimhsfidlnvfvql*srnlviqnqrn*hsfnlgmihyyts*iwq
rliliftf*nkvi*qledvkilqqdiysmi*lnymlyqilnkillsleivisyplvkhlq
ylmqsknyvlvlnlmhfksliliitf*lihs*ifl*qiwmviiliiwlivlvfqnqiyk*
lk*liinnnnnnnknnksf*k*yavlyqmniniwfii***kink*ekklinklkilkk

Frame B:
*qklytqtpnllfrliiknyyk*likgifyf*k*kn*ilkngckiyyq*rsiapsqk*ct
prsrkvl*rl*siiknky***tsd*yg***t*sqnt*rcdrsl*dgsfrc*syserskdi
lvlfnefikl*yvidg*ishsfpiiwwynlrvgyrrtp**ilsry*nhenrwwfryd*ng
twfkc*tn*nns*i*pyykriyn*ftnsfky*ildw*ygkiwytycfil*inl*r*r*rc
twysytn*rfr**kcisry*nw*lws---

---*k*ngyfsnsrg*wssiistig*ifiiri*emv*errcyriyn*rgsnffsn**snv
ysy*insiysie*issscipl*i*tysfncnret*sfkikeidipsile*fttihhrygk
glfsslhfrtksssn*kmsrsfnktftq*fd*ticsiky*trfcfl*kl*flilw*sicn
i*cnqrtmywy*tlctsnh*f*l*hfn*stlkysfskfgw*ly*syg*lcwcskikfinn
*nn**liiiiiiikiishfkndmrfyik*i*tfgl*fnnkk*inkkkn**in*kf*k

Frame C:
nknythkhpifysa*l*riiinn**RVFFIFKNRKIKYSRMDVKYIINKDQLHQARNSAL
HAHEKYYKDFSQLLKTNINNRPVIDMASDEHKAKTHRDAIEVCKMGVLDVRVIQKDPKIF
LSYLTSLSSCDMSLMAKLVIHFQLFGGTILELGTEEHHNKYFPDIKTMRIVGGFGMTEMG
HGSNVRQIETTAEYDHTTKEFIINSPTRSSTKFWIGNMAKYGTHIVLFCRLIYKGEDKGV
HGIVTQIRDLDSKNVFPGIEIGDCGP---

---RNEMDIFQTAEGDGAVLYQQLAKFLLSEYKKWYKKEGVTGYIIKEVQTFLATSNPMY
THTRSIPYILSNEFHHHAFLYRFERIRSTVIEKLSHSKSKKLTFLQSWNDSLLYIIDMAK
AYSHLYILEQSHLAIRRCQDPSTRHLLNDLIKLYALSNIEQDFAFFRNCNFLSSGKAFAI
SDAIKELCIGIKPYALQIINSDYNILIDPLLNIPLANLDGDYINHMADCVGVPKSNL*ii
kiinn********k**vilkmicgfisneykhlvynliiknk*irkkink*iknfkk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11701-1 (Contig-U11701-1Q)
/CSM_Contig/Contig-U11701-1Q.Seq.d
(1696 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11701-1 (Contig-U11701-1Q) /CSM_Contig/Conti... 2870 0.0
Contig-U11187-1 (Contig-U11187-1Q) /CSM_Contig/Conti... 40 0.008
Contig-U13190-1 (Contig-U13190-1Q) /CSM_Contig/Conti... 38 0.030
Contig-U12462-1 (Contig-U12462-1Q) /CSM_Contig/Conti... 38 0.030
Contig-U14239-1 (Contig-U14239-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U13359-1 (Contig-U13359-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U12450-1 (Contig-U12450-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U11084-1 (Contig-U11084-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U10376-1 (Contig-U10376-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U09309-1 (Contig-U09309-1Q) /CSM_Contig/Conti... 36 0.12

>Contig-U11701-1 (Contig-U11701-1Q) /CSM_Contig/Contig-U11701-1Q.Seq.d
Length = 1696

Score = 2870 bits (1448), Expect = 0.0
Identities = 1502/1514 (99%)
Strand = Plus / Plus


Query: 1 ataacaaaaattatacacacaaacacccaatcttttattccgcttaattataaagaatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataacaaaaattatacacacaaacacccaatcttttattccgcttaattataaagaatta 60


Query: 61 ttataaataattaataaagggtannnnnnnnnnnnaaaaatagaaaaattaaatactcaa 120
||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 61 ttataaataattaataaagggtattttttatttttaaaaatagaaaaattaaatactcaa 120


Query: 121 gaatggatgtaaaatatattatcaataaagatcaattgcaccaagccagaaatagtgcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaatggatgtaaaatatattatcaataaagatcaattgcaccaagccagaaatagtgcac 180


Query: 181 tccacgctcacgaaaagtattataaagactttagtcaattattaaaaacaaatattaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tccacgctcacgaaaagtattataaagactttagtcaattattaaaaacaaatattaata 240


Query: 241 atagaccagtgattgatatggctagtgatgaacataaagccaaaacacatagagatgcga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atagaccagtgattgatatggctagtgatgaacataaagccaaaacacatagagatgcga 300


Query: 301 tagaagtttgtaagatgggagttttagatgttagagttattcagaaagatccaaagatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagaagtttgtaagatgggagttttagatgttagagttattcagaaagatccaaagatat 360


Query: 361 tcttgtcctatttaacgagtttatcaagttgtgatatgtcattgatggctaaattagtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcttgtcctatttaacgagtttatcaagttgtgatatgtcattgatggctaaattagtca 420


Query: 421 ttcatttccaattatttggtggtacaatcttagagttgggtacagaagaacaccataata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttcatttccaattatttggtggtacaatcttagagttgggtacagaagaacaccataata 480


Query: 481 aatactttccagatattaaaaccatgagaatcgttggtggtttcggtatgactgaaatgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatactttccagatattaaaaccatgagaatcgttggtggtttcggtatgactgaaatgg 540


Query: 541 gacatggttcaaatgttagacaaattgaaacaacagctgaatatgaccatactacaaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gacatggttcaaatgttagacaaattgaaacaacagctgaatatgaccatactacaaaag 600


Query: 601 aatttataattaattcaccaactcgttcaagtactaaattttggattggtaatatggcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aatttataattaattcaccaactcgttcaagtactaaattttggattggtaatatggcaa 660


Query: 661 aatatggtacacatattgttttattttgtagattaatttataaaggtgaagataaaggtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aatatggtacacatattgttttattttgtagattaatttataaaggtgaagataaaggtg 720


Query: 721 tacatggtatagttacacaaattagagatttagatagtaaaaatgtatttccaggtattg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tacatggtatagttacacaaattagagatttagatagtaaaaatgtatttccaggtattg 780


Query: 781 aaattggtgattgtggtccaannnnnnnnnnatagaaatgaaatggatatttttcaaaca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aaattggtgattgtggtccaannnnnnnnnnatagaaatgaaatggatatttttcaaaca 840


Query: 841 gcagagggtgatggagcagtattatatcaacaattggctaaatttttattatcagaatat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gcagagggtgatggagcagtattatatcaacaattggctaaatttttattatcagaatat 900


Query: 901 aagaaatggtataagaaagaaggtgttacaggatatataattaaagaggttcaaactttt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aagaaatggtataagaaagaaggtgttacaggatatataattaaagaggttcaaactttt 960


Query: 961 ttagcaactagtaatccaatgtatactcatactagatcaattccatatattctatcgaat 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ttagcaactagtaatccaatgtatactcatactagatcaattccatatattctatcgaat 1020


Query: 1021 gaatttcatcatcatgcattcctttatagatttgaacgtattcgttcaactgtaatcgag 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gaatttcatcatcatgcattcctttatagatttgaacgtattcgttcaactgtaatcgag 1080


Query: 1081 aaacttagtcattcaaaatcaaagaaattgacattccttcaatcttggaatgattcacta 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 aaacttagtcattcaaaatcaaagaaattgacattccttcaatcttggaatgattcacta 1140


Query: 1141 ctatacatcatagatatggcaaaggcttattctcatctttacattttagaacaaagtcat 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ctatacatcatagatatggcaaaggcttattctcatctttacattttagaacaaagtcat 1200


Query: 1201 ctagcaattagaagatgtcaagatccttcaacaagacatttactcaatgatttgattaaa 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ctagcaattagaagatgtcaagatccttcaacaagacatttactcaatgatttgattaaa 1260


Query: 1261 ctatatgctctatcaaatattgaacaagattttgctttctttagaaattgtaatttctta 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ctatatgctctatcaaatattgaacaagattttgctttctttagaaattgtaatttctta 1320


Query: 1321 tcctctggtaaagcatttgcaatatctgatgcaatcaaagaactatgtattggtattaaa 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 tcctctggtaaagcatttgcaatatctgatgcaatcaaagaactatgtattggtattaaa 1380


Query: 1381 ccttatgcacttcaaatcattaattctgattataacattttaattgatccactcttaaat 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ccttatgcacttcaaatcattaattctgattataacattttaattgatccactcttaaat 1440


Query: 1441 attcctttagcaaatttggatggtgattatattaatcatatggctgattgtgttggtgtt 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 attcctttagcaaatttggatggtgattatattaatcatatggctgattgtgttggtgtt 1500


Query: 1501 ccaaaatcaaattt 1514
||||||||||||||
Sbjct: 1501 ccaaaatcaaattt 1514


Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus


Query: 1573 gtcattttaaaaatgatatgcggttt 1598
||||||||||||||||||||||||||
Sbjct: 1573 gtcattttaaaaatgatatgcggttt 1598


>Contig-U11187-1 (Contig-U11187-1Q) /CSM_Contig/Contig-U11187-1Q.Seq.d
Length = 3426

Score = 40.1 bits (20), Expect = 0.008
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 221 attaaaaacaaatattaata 240
||||||||||||||||||||
Sbjct: 861 attaaaaacaaatattaata 880


Score = 30.2 bits (15), Expect = 7.4
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1485 tgattgtgttggtgt 1499
|||||||||||||||
Sbjct: 1464 tgattgtgttggtgt 1478


>Contig-U13190-1 (Contig-U13190-1Q) /CSM_Contig/Contig-U13190-1Q.Seq.d
Length = 1421

Score = 38.2 bits (19), Expect = 0.030
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 1296 tttctttagaaattgtaat 1314
|||||||||||||||||||
Sbjct: 310 tttctttagaaattgtaat 328


Score = 30.2 bits (15), Expect = 7.4
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 220 tattaaaaacaaata 234
|||||||||||||||
Sbjct: 83 tattaaaaacaaata 69


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 24,455
Number of Sequences: 6905
Number of extensions: 24455
Number of successful extensions: 2742
Number of sequences better than 10.0: 258
length of query: 1696
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1680
effective length of database: 5,564,391
effective search space: 9348176880
effective search space used: 9348176880
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.26
Homology vs DNA
Query= Contig-U11701-1 (Contig-U11701-1Q) /CSM_Contig/Contig-U11701-1Q.Seq.d
(1696 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ380471) Dictyostelium discoideum cDNA clone:ddc38d09, 3' ... 1318 0.0 1
(BJ441695) Dictyostelium discoideum cDNA clone:ddv47e13, 3' ... 1237 0.0 1
(BJ437145) Dictyostelium discoideum cDNA clone:ddv33h11, 3' ... 1231 0.0 1
(BJ379674) Dictyostelium discoideum cDNA clone:ddc35j16, 3' ... 1221 0.0 1
(BJ370203) Dictyostelium discoideum cDNA clone:ddc53d11, 5' ... 1178 0.0 1
(BJ364492) Dictyostelium discoideum cDNA clone:ddc31n19, 5' ... 1120 0.0 1
(BJ383509) Dictyostelium discoideum cDNA clone:ddc53d11, 3' ... 1084 0.0 1
(BJ379860) Dictyostelium discoideum cDNA clone:ddc36a09, 3' ... 1061 0.0 1
(BJ366244) Dictyostelium discoideum cDNA clone:ddc38d09, 5' ... 1041 0.0 1
(BJ378432) Dictyostelium discoideum cDNA clone:ddc31n19, 3' ... 1031 0.0 1
(BJ365510) Dictyostelium discoideum cDNA clone:ddc35j16, 5' ... 942 0.0 2
(AU062086) Dictyostelium discoideum slug cDNA, clone SLH509. 957 0.0 1
(BJ365682) Dictyostelium discoideum cDNA clone:ddc36a09, 5' ... 934 0.0 1
(AU037771) Dictyostelium discoideum slug cDNA, clone SSE273. 531 e-146 1
(AU073468) Dictyostelium discoideum slug cDNA, clone SSH291. 476 e-129 1
(AU072355) Dictyostelium discoideum slug cDNA, clone SSE273. 476 e-129 1
(AR546297) Sequence 1428 from patent US 6747137. 54 0.018 1
(AC189476) Brassica rapa subsp. pekinensis clone KBrB080N15,... 40 0.068 6
(AC160254) Bos taurus clone CH240-89J18, WORKING DRAFT SEQUE... 50 0.28 1
(AC172756) Bos taurus clone CH240-305C4, WORKING DRAFT SEQUE... 50 0.28 1
(AC170056) Atelerix albiventris clone LB4-130K1, WORKING DRA... 50 0.28 1
(CL181618) 104_392_10896870_116_31926_246 Sorghum methylatio... 50 0.28 1
(CL151484) 104_334_10779284_114_31361_068 Sorghum methylatio... 50 0.28 1
(CC524530) CH240_373F19.T7 CHORI-240 Bos taurus genomic clon... 50 0.28 1
(EC274672) TT1CM56TH Tetrahymena thermophila SB210 cDNA libr... 46 0.37 2
(CX580251) TTE00023583 Amplicon Express - Conjugative Form T... 46 0.39 2
(CX581536) TTE00020322 Amplicon Express - Conjugative Form T... 46 0.40 2
(FF563076) TT1B244TH Tetrahymena thermophila SB210 cDNA libr... 46 0.47 2
(FD706833) CAAA13911.fwd CAAA Petromyzon marinus Petromyzon ... 40 0.48 2
(BM400433) 5009-0-72-G07.t.1 Chilcoat/Turkewitz cDNA (large ... 46 0.56 2
(CU463336) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 1.1 1
(AC178846) Strongylocentrotus purpuratus clone R3-26F6, WORK... 48 1.1 1
(DC211644) Plasmodium berghei strain ANKA cDNA clone:MG01276... 48 1.1 1
(DC210353) Plasmodium berghei strain ANKA cDNA clone:MG01106... 48 1.1 1
(DC204442) Plasmodium berghei strain ANKA cDNA clone:MG00383... 48 1.1 1
(DC203896) Plasmodium berghei strain ANKA cDNA clone:MG00317... 48 1.1 1
(BB973642) Plasmodium berghei strain ANKA cDNA clone:OK00342... 48 1.1 1
(EJ092236) 1095460204856 Global-Ocean-Sampling_GS-26-01-01-1... 36 1.1 2
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 38 1.2 16
(ED626613) GM_WBa0024L11.f GM_WBa Glycine max genomic clone ... 40 1.4 2
(AL136106) Human DNA sequence *** SEQUENCING CANCELLED *** f... 36 2.3 8
(BW908145) Branchiostoma floridae cDNA, neurula clone:bfne00... 34 2.9 2
(CT030320) Xenopus tropicalis finished cDNA, clone TEgg126j20. 46 4.4 1
(AC144375) Medicago truncatula clone mth2-11p13, complete se... 46 4.4 1
(DD010736) Diagnosis of known genetic Parameters within the ... 46 4.4 1
(AX344571) Sequence 22 from Patent WO0200932. 46 4.4 1
(AC159927) Atelerix albiventris clone LB4-91J8, WORKING DRAF... 46 4.4 1
(CR940348) Theileria annulata genomic DNA chromosome 2. 46 4.4 1
(ER442048) 1092963816663 Global-Ocean-Sampling_GS-35-01-01-1... 46 4.4 1
(ER406790) 1095366021412 Global-Ocean-Sampling_GS-34-01-01-1... 46 4.4 1
(EJ927101) 1093018787298 Global-Ocean-Sampling_GS-30-02-01-1... 46 4.4 1
(EJ844183) 1093017846781 Global-Ocean-Sampling_GS-30-02-01-1... 46 4.4 1
(EJ707215) 1092956057951 Global-Ocean-Sampling_GS-30-02-01-1... 46 4.4 1
(EJ661866) 1092955026497 Global-Ocean-Sampling_GS-30-02-01-1... 46 4.4 1
(EJ597055) 1092961095987 Global-Ocean-Sampling_GS-29-01-01-1... 46 4.4 1
(EJ594587) 1092961069875 Global-Ocean-Sampling_GS-29-01-01-1... 46 4.4 1
(ED804812) MG__Bb0078D16r MG__Bb Mimulus guttatus genomic, g... 46 4.4 1
(DX405395) GR_Sa0008D14.b1 Gossypium raimondii WGS library G... 46 4.4 1
(CZ290519) cp70d08.f Candida parapsilosis Random Genomic Lib... 46 4.4 1
(CZ278890) cp02f02.r Candida parapsilosis Random Genomic Lib... 46 4.4 1
(EG625905) EMBRYOF088230B4 POSSUM_01-POSSUM-C-EMBRYO-2KB Tri... 46 4.4 1
(CX452821) JGI_XZG24198.rev NIH_XGC_tropGas7 Xenopus (Silura... 46 4.4 1
(CK484569) ai_L000.94 Bay Scallop spat whole body ZAP Expres... 46 4.4 1
(AJ935554) Theileria annulata EST, clone ta0076E08_b. 46 4.4 1
(AJ935192) Theileria annulata EST, clone ta0061E02_b. 46 4.4 1
(AJ933544) Theileria annulata EST, clone ta0060A10_b. 46 4.4 1
(AJ932754) Theileria annulata EST, clone ta0019F11_b. 46 4.4 1
(AJ931321) Theileria annulata EST, clone ta0061B08_b. 46 4.4 1
(AJ930201) Theileria annulata EST, clone ta0061D10_b. 46 4.4 1
(CP000387) Streptococcus sanguinis SK36, complete genome. 46 4.4 1
(EJ946974) 1093018918924 Global-Ocean-Sampling_GS-30-02-01-1... 42 5.7 2
(FG736837) G1145P326FM23.T0 Anolis carolinensis pooled norma... 36 6.4 2
(AM442495) Vitis vinifera, whole genome shotgun sequence, co... 40 6.5 4
(EJ971936) 1093022088529 Global-Ocean-Sampling_GS-30-02-01-1... 42 7.5 2
(AC105171) Mus musculus clone RP24-170O9, WORKING DRAFT SEQU... 34 7.9 2
(CT954327) Mouse DNA sequence from clone RP24-537H9 on chrom... 34 8.2 2
(AM472018) Vitis vinifera contig VV78X026033.15, whole genom... 36 9.3 3
(DX527299) GH_MBb0047F21f GH_MBb Gossypium hirsutum genomic ... 36 9.4 2
(EI348368) GM_WBc0095E22.r GM_WBc Glycine max genomic clone ... 34 9.9 3

>(BJ380471) Dictyostelium discoideum cDNA clone:ddc38d09, 3' end,
single read.
Length = 803

Score = 1318 bits (665), Expect = 0.0
Identities = 670/672 (99%)
Strand = Plus / Minus


Query: 831 ttttcaaacagcagagggtgatggagcagtattatatcaacaattggctaaatttttatt 890
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 803 ttttcaaacagcagagggtgatggggcagtattatatcaacaattggntaaatttttatt 744


Query: 891 atcagaatataagaaatggtataagaaagaaggtgttacaggatatataattaaagaggt 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 atcagaatataagaaatggtataagaaagaaggtgttacaggatatataattaaagaggt 684


Query: 951 tcaaacttttttagcaactagtaatccaatgtatactcatactagatcaattccatatat 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tcaaacttttttagcaactagtaatccaatgtatactcatactagatcaattccatatat 624


Query: 1011 tctatcgaatgaatttcatcatcatgcattcctttatagatttgaacgtattcgttcaac 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tctatcgaatgaatttcatcatcatgcattcctttatagatttgaacgtattcgttcaac 564


Query: 1071 tgtaatcgagaaacttagtcattcaaaatcaaagaaattgacattccttcaatcttggaa 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tgtaatcgagaaacttagtcattcaaaatcaaagaaattgacattccttcaatcttggaa 504


Query: 1131 tgattcactactatacatcatagatatggcaaaggcttattctcatctttacattttaga 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tgattcactactatacatcatagatatggcaaaggcttattctcatctttacattttaga 444


Query: 1191 acaaagtcatctagcaattagaagatgtcaagatccttcaacaagacatttactcaatga 1250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 acaaagtcatctagcaattagaagatgtcaagatccttcaacaagacatttactcaatga 384


Query: 1251 tttgattaaactatatgctctatcaaatattgaacaagattttgctttctttagaaattg 1310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tttgattaaactatatgctctatcaaatattgaacaagattttgctttctttagaaattg 324


Query: 1311 taatttcttatcctctggtaaagcatttgcaatatctgatgcaatcaaagaactatgtat 1370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 taatttcttatcctctggtaaagcatttgcaatatctgatgcaatcaaagaactatgtat 264


Query: 1371 tggtattaaaccttatgcacttcaaatcattaattctgattataacattttaattgatcc 1430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tggtattaaaccttatgcacttcaaatcattaattctgattataacattttaattgatcc 204


Query: 1431 actcttaaatattcctttagcaaatttggatggtgattatattaatcatatggctgattg 1490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 actcttaaatattcctttagcaaatttggatggtgattatattaatcatatggctgattg 144


Query: 1491 tgttggtgttcc 1502
||||||||||||
Sbjct: 143 tgttggtgttcc 132

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,763,649,662
Number of extensions: 106441590
Number of successful extensions: 8611950
Number of sequences better than 10.0: 81
Length of query: 1696
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1672
Effective length of database: 97,308,875,965
Effective search space: 162700440613480
Effective search space used: 162700440613480
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.30
Homology vs Protein
Query= Contig-U11701-1 (Contig-U11701-1Q) /CSM_Contig/Contig-U11701-1Q.Seq.d
(1696 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(O65201) RecName: Full=Acyl-coenzyme A oxidase 2, peroxisomal; ... 142 3e-32
AK317051_1(AK317051|pid:none) Arabidopsis thaliana AT5G65110 mRN... 142 3e-32
AF057043_1(AF057043|pid:none) Arabidopsis thaliana acyl-CoA oxid... 142 3e-32
EU973313_1(EU973313|pid:none) Zea mays clone 396607 acyl-coenzym... 142 4e-32
(O64894) RecName: Full=Acyl-coenzyme A oxidase, peroxisomal; ... 140 1e-31
AC116979_33(AC116979|pid:none) Dictyostelium discoideum chromoso... 139 2e-31
U66299_1(U66299|pid:none) Phalaenopsis sp. 'True Lady' acyl-CoA ... 137 1e-30
U77053_1(U77053|pid:none) Phalaenopsis cv. 'True Lady' acyl-CoA ... 137 1e-30
CP000088_2232(CP000088|pid:none) Thermobifida fusca YX, complete... 135 6e-30
AC025290_15(AC025290|pid:none) Sequence of BAC F9P14 from Arabid... 133 2e-29
(Q9LLH9) RecName: Full=Acyl-coenzyme A oxidase 3, peroxisomal; ... 133 2e-29
AF207994_1(AF207994|pid:none) Arabidopsis thaliana acyl-CoA oxid... 133 2e-29
AC117081_72(AC117081|pid:none) Dictyostelium discoideum chromoso... 133 2e-29
AC116979_31(AC116979|pid:none) Dictyostelium discoideum chromoso... 132 3e-29
(Q9LMI7) RecName: Full=Putative acyl-coenzyme A oxidase 3.2, per... 132 3e-29
AF202987_1(AF202987|pid:none) Petroselinum crispum acyl-CoA oxid... 132 4e-29
AP008957_1663(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 131 7e-29
AC149079_18(AC149079|pid:none) Medicago truncatula clone mth2-75... 129 4e-28
AF404404_1(AF404404|pid:none) Glycine max acyl-CoA oxidase (ACX1... 128 6e-28
AP011115_1718(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 127 9e-28
(Q5RAU0) RecName: Full=Peroxisomal acyl-coenzyme A oxidase 3; ... 127 2e-27
(Q9ZQP2) RecName: Full=Putative peroxisomal acyl-coenzyme A oxid... 127 2e-27
AF404403_1(AF404403|pid:none) Glycine max acyl-CoA oxidase (ACX1... 126 3e-27
AM420293_7173(AM420293|pid:none) Saccharopolyspora erythraea NRR... 125 4e-27
BT064264_1(BT064264|pid:none) Zea mays full-length cDNA clone ZM... 125 6e-27
BT033561_1(BT033561|pid:none) Zea mays full-length cDNA clone ZM... 124 1e-26
AM942444_1844(AM942444|pid:none) Corynebacterium urealyticum DSM... 123 2e-26
AP009493_6404(AP009493|pid:none) Streptomyces griseus subsp. gri... 122 5e-26
BT067440_1(BT067440|pid:none) Zea mays full-length cDNA clone ZM... 121 7e-26
AY817111_1(AY817111|pid:none) Lycopersicon cheesmaniae peroxisom... 121 7e-26
AK028818_1(AK028818|pid:none) Mus musculus 10 days neonate skin ... 121 7e-26
CP000479_1992(CP000479|pid:none) Mycobacterium avium 104, comple... 121 7e-26
BC044725_1(BC044725|pid:none) Mus musculus acyl-Coenzyme A oxida... 121 7e-26
AY817109_1(AY817109|pid:none) Lycopersicon esculentum peroxisoma... 121 7e-26
(Q9EPL9) RecName: Full=Peroxisomal acyl-coenzyme A oxidase 3; ... 121 7e-26
(O65202) RecName: Full=Peroxisomal acyl-coenzyme A oxidase 1; ... 120 2e-25
AL161544_35(AL161544|pid:none) Arabidopsis thaliana DNA chromoso... 120 2e-25
AJ278430_1(AJ278430|pid:none) Mus musculus mRNA for pristanoyl-C... 120 2e-25
BC134478_1(BC134478|pid:none) Bos taurus acyl-Coenzyme A oxidase... 119 3e-25
CP001341_1861(CP001341|pid:none) Arthrobacter chlorophenolicus A... 118 8e-25
CP000474_2049(CP000474|pid:none) Arthrobacter aurescens TC1, com... 117 1e-24
AF463454_1(AF463454|pid:none) Phascolarctos cinereus acyl-CoA ox... 117 1e-24
(Q6FY63) RecName: Full=Acyl-coenzyme A oxidase; Short=A... 116 2e-24
AB212678_1(AB212678|pid:none) Arthrobacter ureafaciens aco gene ... 116 2e-24
AK028876_1(AK028876|pid:none) Mus musculus 10 days neonate skin ... 116 2e-24
AL607108_23(AL607108|pid:none) Mouse DNA sequence from clone RP2... 116 2e-24
(Q8HYL8) RecName: Full=Peroxisomal acyl-coenzyme A oxidase 1; ... 116 2e-24
AY817110_1(AY817110|pid:none) Lycopersicon esculentum peroxisoma... 116 3e-24
(Q5RC19) RecName: Full=Peroxisomal acyl-coenzyme A oxidase 1; ... 116 3e-24
(Q15067) RecName: Full=Peroxisomal acyl-coenzyme A oxidase 1; ... 115 5e-24
AK292965_1(AK292965|pid:none) Homo sapiens cDNA FLJ76484 complet... 115 5e-24
CP000656_2707(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 115 6e-24
I38095(I38095) acyl-CoA oxidase (EC 1.3.3.6), peroxisomal - huma... 114 8e-24
AK291793_1(AK291793|pid:none) Homo sapiens cDNA FLJ75886 complet... 114 8e-24
(P07872) RecName: Full=Peroxisomal acyl-coenzyme A oxidase 1; ... 114 8e-24
AB034914_1(AB034914|pid:none) Mus musculus muspaox mRNA for pero... 114 1e-23
(Q9R0H0) RecName: Full=Peroxisomal acyl-coenzyme A oxidase 1; ... 114 1e-23
DQ842227_1(DQ842227|pid:none) Sus scrofa breed Landrace palmitoy... 114 1e-23
CU458896_3560(CU458896|pid:none) Mycobacterium abscessus chromos... 114 1e-23
U07866_1(U07866|pid:none) Human peroxisomal fatty acyl-coA oxida... 113 2e-23
BC089698_1(BC089698|pid:none) Xenopus tropicalis MGC108278 prote... 113 2e-23
CP000581_266(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 112 3e-23
(Q9Z1N0) RecName: Full=Peroxisomal acyl-coenzyme A oxidase 1; ... 112 3e-23
CP000384_3420(CP000384|pid:none) Mycobacterium sp. MCS, complete... 112 5e-23
AP006618_2492(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 112 5e-23
CP000910_2046(CP000910|pid:none) Renibacterium salmoninarum ATCC... 111 9e-23
CR848332_1(CR848332|pid:none) Xenopus tropicalis finished cDNA, ... 110 1e-22
BC125765_1(BC125765|pid:none) Xenopus tropicalis hypothetical pr... 110 1e-22
CP001628_1101(CP001628|pid:none) Micrococcus luteus NCTC 2665, c... 110 2e-22
BC063727_1(BC063727|pid:none) Xenopus laevis hypothetical protei... 110 2e-22
FN392319_1331(FN392319|pid:none) Pichia pastoris GS115 chromosom... 109 3e-22
(Q9Y7B1) RecName: Full=Acyl-coenzyme A oxidase; Short=A... 108 5e-22
AM920435_180(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 108 6e-22
AJ001302_1(AJ001302|pid:none) Yarrowia lipolytica ACO4 gene. &C... 108 6e-22
CR382131_1362(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 108 8e-22
AP009152_1677(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ... 108 8e-22
BC097101_1(BC097101|pid:none) Danio rerio zgc:92584, mRNA (cDNA ... 108 8e-22
(O74934) RecName: Full=Acyl-coenzyme A oxidase 1; Short... 108 8e-22
EF085068_1(EF085068|pid:none) Picea sitchensis clone WS02813_G04... 108 8e-22
BC083524_1(BC083524|pid:none) Danio rerio zgc:92584, mRNA (cDNA ... 107 2e-21
M27515_1(M27515|pid:none) Yeast (S.cerevisiae) acyl-coenzyme A o... 106 2e-21
BC022268_1(BC022268|pid:none) Homo sapiens acyl-Coenzyme A oxida... 106 3e-21
(Q9NUZ1) RecName: Full=Acyl-coenzyme A oxidase-like protein; ... 106 3e-21
CU928181_331(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 104 9e-21
(Q7KML2) RecName: Full=Probable peroxisomal acyl-coenzyme A oxid... 104 9e-21
(Q99424) RecName: Full=Peroxisomal acyl-coenzyme A oxidase 2; ... 103 1e-20
AE017347_31(AE017347|pid:none) Cryptococcus neoformans var. neof... 102 4e-20
(Q54GQ6) RecName: Full=Peroxisomal acyl-coenzyme A oxidase 1; ... 102 4e-20
BX120012_1(BX120012|pid:none) Zebrafish DNA sequence from clone ... 102 6e-20
AM711867_829(AM711867|pid:none) Clavibacter michiganensis subsp.... 101 7e-20
(P05335) RecName: Full=Acyl-coenzyme A oxidase 4; Short... 101 7e-20
OXCKPM(A29441)acyl-CoA oxidase (EC 1.3.3.6) PXP4, peroxisomal - ... 101 7e-20
(P34355) RecName: Full=Probable peroxisomal acyl-coenzyme A oxid... 101 9e-20
AY060596_1(AY060596|pid:none) Drosophila melanogaster GH01266 fu... 101 9e-20
AM920428_1441(AM920428|pid:none) Penicillium chrysogenum Wiscons... 101 9e-20
AP007175_12(AP007175|pid:none) Aspergillus oryzae RIB40 genomic ... 100 2e-19
(Q756A9) RecName: Full=Acyl-coenzyme A oxidase; Short=A... 100 2e-19
(P11356) RecName: Full=Acyl-coenzyme A oxidase 2; Short... 99 4e-19
T20569(T20569) hypothetical protein F08A8.3 - Caenorhabditis ele... 98 8e-19
FM992690_189(FM992690|pid:none) Candida dubliniensis CD36 chromo... 98 1e-18
BC021339_1(BC021339|pid:none) Mus musculus acyl-Coenzyme A oxida... 98 1e-18
(Q6BRD5) RecName: Full=Acyl-coenzyme A oxidase; Short=A... 97 1e-18
CR382136_852(CR382136|pid:none) Debaryomyces hansenii chromosome... 97 1e-18
AF051203_1(AF051203|pid:none) Picea mariana acyl-CoA oxidase hom... 97 2e-18
CP000094_2859(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 96 3e-18
(P08790) RecName: Full=Acyl-coenzyme A oxidase 5; Short... 96 3e-18
OXCKX5(B25123)acyl-CoA oxidase (EC 1.3.3.6) POX5, peroxisomal - ... 96 3e-18
FM992693_326(FM992693|pid:none) Candida dubliniensis CD36 chromo... 96 5e-18
AK144243_1(AK144243|pid:none) Mus musculus kidney CCL-142 RAG cD... 95 7e-18
AP007159_665(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 95 9e-18
FJ362381_9(FJ362381|pid:none) Caenorhabditis sp. PS1010 contig J... 94 2e-17
T21329(T21329) hypothetical protein F25C8.1 - Caenorhabditis ele... 94 2e-17
Z99710_6(Z99710|pid:none) Caenorhabditis elegans Cosmid F08A8, c... 93 3e-17
T20568(T20568)hypothetical protein F08A8.2 - Caenorhabditis eleg... 93 3e-17
Z99710_4(Z99710|pid:none) Caenorhabditis elegans Cosmid F08A8, c... 93 3e-17
T20571(T20571) hypothetical protein F08A8.1 - Caenorhabditis ele... 93 3e-17
Z99710_5(Z99710|pid:none) Caenorhabditis elegans Cosmid F08A8, c... 93 3e-17
AX155021_1(AX155021|pid:none) Sequence 67 from Patent WO0138484. 93 3e-17
EF467330_1(EF467330|pid:none) Nicotiana attenuata clone 13-2 acy... 90 3e-16
AE014134_1139(AE014134|pid:none) Drosophila melanogaster chromos... 89 4e-16
AY069799_1(AY069799|pid:none) Drosophila melanogaster SD03592 fu... 89 4e-16
AE013599_3398(AE013599|pid:none) Drosophila melanogaster chromos... 89 4e-16
(Q00468) RecName: Full=Acyl-coenzyme A oxidase 2; Short... 87 2e-15
AF356085_1(AF356085|pid:none) Cricetulus griseus acyl-CoA oxidas... 78 1e-12
AM420293_5368(AM420293|pid:none) Saccharopolyspora erythraea NRR... 74 2e-11
AL805950_2(AL805950|pid:none) Mouse DNA sequence from clone RP23... 73 4e-11
AP009493_142(AP009493|pid:none) Streptomyces griseus subsp. gris... 65 8e-09
AF055922_10(AF055922|pid:none) Streptomyces fradiae dipeptidil c... 65 1e-08
AF145049_1(AF145049|pid:none) Streptomyces fradiae tylosin-biosy... 65 1e-08
AE014134_1156(AE014134|pid:none) Drosophila melanogaster chromos... 59 7e-07
AM270236_11(AM270236|pid:none) Aspergillus niger contig An11c019... 59 7e-07
CP000386_2401(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 58 9e-07
BC050168_1(BC050168|pid:none) Danio rerio glutaryl-Coenzyme A de... 57 2e-06
BC083397_1(BC083397|pid:none) Danio rerio glutaryl-Coenzyme A de... 56 4e-06
CR954212_226(CR954212|pid:none) Ostreococcus tauri strain OTTH05... 56 4e-06
CP001323_243(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 56 5e-06
CP000431_1850(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 56 5e-06
AP011115_1553(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 55 8e-06
BA000028_2667(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 54 1e-05
AF039038_2(AF039038|pid:none) Caenorhabditis elegans cosmid K06A... 54 1e-05
CP000592_234(CP000592|pid:none) Ostreococcus lucimarinus CCE9901... 54 2e-05
AK342563_1(AK342563|pid:none) Acyrthosiphon pisum ACYPI004433 mR... 54 2e-05
AF012342_1(AF012342|pid:none) Homo sapiens glutaryl-CoA dehydrog... 54 2e-05
AY891828_1(AY891828|pid:none) Synthetic construct Homo sapiens c... 54 2e-05
(Q92947) RecName: Full=Glutaryl-CoA dehydrogenase, mitochondrial... 54 2e-05
AK296446_1(AK296446|pid:none) Homo sapiens cDNA FLJ59559 complet... 54 2e-05
AB170318_1(AB170318|pid:none) Macaca fascicularis brain cDNA clo... 53 4e-05
CR860857_1(CR860857|pid:none) Pongo abelii mRNA; cDNA DKFZp469I0... 53 4e-05
(Q8HXX8) RecName: Full=Glutaryl-CoA dehydrogenase, mitochondrial... 52 5e-05
CR931997_1479(CR931997|pid:none) Corynebacterium jeikeium K411 c... 52 5e-05
CP000083_634(CP000083|pid:none) Colwellia psychrerythraea 34H, c... 52 7e-05
CP000454_434(CP000454|pid:none) Arthrobacter sp. FB24, complete ... 52 7e-05
CR761575_1(CR761575|pid:none) Xenopus tropicalis finished cDNA, ... 52 9e-05
AK165406_1(AK165406|pid:none) Mus musculus adult male kidney cDN... 52 9e-05
CP001124_2803(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 52 9e-05
AK078866_1(AK078866|pid:none) Mus musculus adult male colon cDNA... 52 9e-05
CP001365_2544(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 51 1e-04
CP001638_3040(CP001638|pid:none) Geobacillus sp. WCH70, complete... 51 1e-04
AE000516_2658(AE000516|pid:none) Mycobacterium tuberculosis CDC1... 51 1e-04
AP009152_1650(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ... 51 1e-04
BT045718_1(BT045718|pid:none) Salmo salar clone ssal-rgf-529-163... 51 1e-04
CP000382_1424(CP000382|pid:none) Clostridium novyi NT, complete ... 50 2e-04
CP000557_175(CP000557|pid:none) Geobacillus thermodenitrificans ... 50 2e-04
CP000817_828(CP000817|pid:none) Lysinibacillus sphaericus C3-41,... 50 2e-04
BC095385_1(BC095385|pid:none) Danio rerio im:7141484, mRNA (cDNA... 50 2e-04
CP000854_3787(CP000854|pid:none) Mycobacterium marinum M, comple... 50 2e-04
CP000359_808(CP000359|pid:none) Deinococcus geothermalis DSM 113... 50 3e-04
AM180355_823(AM180355|pid:none) Clostridium difficile 630 comple... 50 3e-04
CP001390_2162(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 50 3e-04
BX571866_278(BX571866|pid:none) Photorhabdus luminescens subsp. ... 50 3e-04
CP000431_2723(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 49 4e-04
CP000249_2142(CP000249|pid:none) Frankia sp. CcI3, complete geno... 49 4e-04
(Q2KHZ9) RecName: Full=Glutaryl-CoA dehydrogenase, mitochondrial... 49 4e-04
CP000750_3476(CP000750|pid:none) Kineococcus radiotolerans SRS30... 49 4e-04
BA000043_445(BA000043|pid:none) Geobacillus kaustophilus HTA426 ... 49 4e-04
AM270105_15(AM270105|pid:none) Aspergillus niger contig An05c005... 49 6e-04
AK031820_1(AK031820|pid:none) Mus musculus adult male medulla ob... 49 6e-04
AJ720566_1(AJ720566|pid:none) Gallus gallus mRNA for hypothetica... 49 6e-04
CP000454_1358(CP000454|pid:none) Arthrobacter sp. FB24, complete... 49 6e-04
CR936257_795(CR936257|pid:none) Natronomonas pharaonis DSM 2160 ... 49 6e-04
AK075984_1(AK075984|pid:none) Mus musculus 10 days embryo whole ... 49 6e-04
CP000721_2013(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 49 6e-04
CP000557_447(CP000557|pid:none) Geobacillus thermodenitrificans ... 49 6e-04
BC131514_1(BC131514|pid:none) Homo sapiens acyl-Coenzyme A oxida... 49 7e-04
CP000721_320(CP000721|pid:none) Clostridium beijerinckii NCIMB 8... 48 0.001
AE000782_978(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304,... 48 0.001
CP000922_1226(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 48 0.001
CP000850_34(CP000850|pid:none) Salinispora arenicola CNS-205, co... 48 0.001
AM412317_3206(AM412317|pid:none) Clostridium botulinum A str. AT... 48 0.001
AY058314_1(AY058314|pid:none) Drosophila melanogaster GH07925 fu... 48 0.001
CP000474_724(CP000474|pid:none) Arthrobacter aurescens TC1, comp... 48 0.001
(Q8JZN5) RecName: Full=Acyl-CoA dehydrogenase family member 9, m... 48 0.001
AE015927_1865(AE015927|pid:none) Clostridium tetani E88, complet... 48 0.001
CP000962_3184(CP000962|pid:none) Clostridium botulinum A3 str. L... 48 0.001
CP001078_1277(CP001078|pid:none) Clostridium botulinum E3 str. A... 48 0.001
(Q54IM8) RecName: Full=Isobutyryl-CoA dehydrogenase, mitochondri... 48 0.001
CR382132_990(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 48 0.001
CP000764_3674(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 48 0.001
CP000910_2101(CP000910|pid:none) Renibacterium salmoninarum ATCC... 48 0.001
AE009951_1359(AE009951|pid:none) Fusobacterium nucleatum subsp. ... 48 0.001
AF494018_2(AF494018|pid:none) Clostridium beijerinckii strain NR... 48 0.001
CP001056_1365(CP001056|pid:none) Clostridium botulinum B str. Ek... 47 0.002
AF142581_1(AF142581|pid:none) Streptomyces coelicolor acyl-CoA d... 47 0.002
CP000910_514(CP000910|pid:none) Renibacterium salmoninarum ATCC ... 47 0.002
BC162016_1(BC162016|pid:none) Rattus norvegicus acyl-Coenzyme A ... 47 0.002
BA000016_97(BA000016|pid:none) Clostridium perfringens str. 13 D... 47 0.002
CP000667_28(CP000667|pid:none) Salinispora tropica CNB-440, comp... 47 0.002
CP000685_4717(CP000685|pid:none) Flavobacterium johnsoniae UW101... 47 0.002
AE000513_1515(AE000513|pid:none) Deinococcus radiodurans R1 chro... 47 0.002
CP001078_1240(CP001078|pid:none) Clostridium botulinum E3 str. A... 47 0.002
CP000246_81(CP000246|pid:none) Clostridium perfringens ATCC 1312... 47 0.002
CP000728_3181(CP000728|pid:none) Clostridium botulinum F str. La... 47 0.003
BA000028_3010(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 47 0.003
CR936258_86(CR936258|pid:none) Natronomonas pharaonis DSM 2160 p... 47 0.003
CP000939_3212(CP000939|pid:none) Clostridium botulinum B1 str. O... 47 0.003
CP001638_414(CP001638|pid:none) Geobacillus sp. WCH70, complete ... 46 0.004
FJ688103_3(FJ688103|pid:none) Desulfococcus multivorans strain D... 46 0.004
AM180355_406(AM180355|pid:none) Clostridium difficile 630 comple... 46 0.004
CP001087_3802(CP001087|pid:none) Desulfobacterium autotrophicum ... 46 0.004
AE017341_420(AE017341|pid:none) Cryptococcus neoformans var. neo... 46 0.004
AP009152_506(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, c... 46 0.004
CP001083_3334(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 46 0.004
AE004437_1141(AE004437|pid:none) Halobacterium sp. NRC-1, comple... 46 0.005
CP000141_1692(CP000141|pid:none) Carboxydothermus hydrogenoforma... 46 0.005
BC089733_1(BC089733|pid:none) Xenopus tropicalis MGC108374 prote... 46 0.005
CP001078_1731(CP001078|pid:none) Clostridium botulinum E3 str. A... 46 0.005
AP008955_5497(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 46 0.005
CP000661_2703(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17... 45 0.006
CP001087_3790(CP001087|pid:none) Desulfobacterium autotrophicum ... 45 0.006
CP001322_3753(CP001322|pid:none) Desulfatibacillum alkenivorans ... 45 0.006
CP001186_5327(CP001186|pid:none) Bacillus cereus G9842, complete... 45 0.006
CP000557_3291(CP000557|pid:none) Geobacillus thermodenitrificans... 45 0.006
DQ515927_1(DQ515927|pid:none) Bombyx mori strain NB acyl-coenzym... 45 0.006
AM920435_792(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 45 0.006
CP001601_872(CP001601|pid:none) Corynebacterium aurimucosum ATCC... 45 0.006
AP006840_2463(AP006840|pid:none) Symbiobacterium thermophilum IA... 45 0.006
CP000863_2477(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 45 0.008
CP001116_158(CP001116|pid:none) Deinococcus deserti VCD115 plasm... 45 0.008
AM746676_7639(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 45 0.008
CP000820_3972(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 45 0.008
CP000438_3069(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 45 0.008
AP011115_6154(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 45 0.008
CP000431_6038(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 45 0.008
AM270251_73(AM270251|pid:none) Aspergillus niger contig An11c034... 45 0.008
AP011115_2380(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 45 0.008
AP009049_560(AP009049|pid:none) Clostridium kluyveri NBRC 12016 ... 45 0.008
T15905(T15905) hypothetical protein E04F6.5 - Caenorhabditis ele... 45 0.011
AM420293_1867(AM420293|pid:none) Saccharopolyspora erythraea NRR... 45 0.011
CP000744_3238(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 45 0.011
CP000511_4015(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 45 0.011
CP000091_1317(CP000091|pid:none) Ralstonia eutropha JMP134 chrom... 45 0.011
BA000040_119(BA000040|pid:none) Bradyrhizobium japonicum USDA 11... 44 0.014
CR543861_1518(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 44 0.014
CP000442_658(CP000442|pid:none) Burkholderia ambifaria AMMD chro... 44 0.014
CP000083_4529(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 44 0.014
AE004437_528(AE004437|pid:none) Halobacterium sp. NRC-1, complet... 44 0.014
CP001177_5286(CP001177|pid:none) Bacillus cereus AH187, complete... 44 0.014
AM238664_417(AM238664|pid:none) Streptomyces ambofaciens ATCC 23... 44 0.014
CP000509_4240(CP000509|pid:none) Nocardioides sp. JS614, complet... 44 0.014
AE017355_4975(AE017355|pid:none) Bacillus thuringiensis serovar ... 44 0.014
CP000769_4235(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 44 0.014
AP009493_4756(AP009493|pid:none) Streptomyces griseus subsp. gri... 44 0.014
BT078234_1(BT078234|pid:none) Lepeophtheirus salmonis Pacific fo... 44 0.014
CP000863_662(CP000863|pid:none) Acinetobacter baumannii ACICU, c... 44 0.018
CP000580_3598(CP000580|pid:none) Mycobacterium sp. JLS, complete... 44 0.018
CP000478_3896(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 44 0.018
CP000817_940(CP000817|pid:none) Lysinibacillus sphaericus C3-41,... 44 0.018
AP008957_4895(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 44 0.018
CP001172_2845(CP001172|pid:none) Acinetobacter baumannii AB307-0... 44 0.018
CU468230_2628(CU468230|pid:none) Acinetobacter baumannii str. SD... 44 0.018
CP000521_748(CP000521|pid:none) Acinetobacter baumannii ATCC 179... 44 0.018
CP001472_2685(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 44 0.018
CP000352_2642(CP000352|pid:none) Ralstonia metallidurans CH34, c... 44 0.018
CP000323_814(CP000323|pid:none) Psychrobacter cryohalolentis K5,... 44 0.018
AM420293_6843(AM420293|pid:none) Saccharopolyspora erythraea NRR... 44 0.018
AM260479_2744(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 44 0.023
BA000004_3799(BA000004|pid:none) Bacillus halodurans C-125 DNA, ... 44 0.023
AP011115_2621(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 44 0.023
CU458896_813(CU458896|pid:none) Mycobacterium abscessus chromoso... 44 0.023
AP009324_232(AP009324|pid:none) Staphylococcus aureus subsp. aur... 44 0.023
CP000431_758(CP000431|pid:none) Rhodococcus jostii RHA1, complet... 44 0.023
AM743169_2999(AM743169|pid:none) Stenotrophomonas maltophilia K2... 44 0.023
BA000028_864(BA000028|pid:none) Oceanobacillus iheyensis HTE831 ... 44 0.023
BA000033_209(BA000033|pid:none) Staphylococcus aureus subsp. aur... 44 0.023
CP000781_901(CP000781|pid:none) Xanthobacter autotrophicus Py2, ... 44 0.023
BX571856_224(BX571856|pid:none) Staphylococcus aureus subsp. aur... 44 0.023
AB170478_1(AB170478|pid:none) Macaca fascicularis brain cDNA clo... 44 0.023
BC079521_1(BC079521|pid:none) Danio rerio acyl-Coenzyme A dehydr... 44 0.023
CP000853_91(CP000853|pid:none) Alkaliphilus oremlandii OhILAs, c... 44 0.023
AP006840_1571(AP006840|pid:none) Symbiobacterium thermophilum IA... 44 0.023
AB169822_1(AB169822|pid:none) Macaca fascicularis brain cDNA, cl... 44 0.023
AP011115_2821(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 43 0.031
BC077618_1(BC077618|pid:none) Xenopus laevis acyl-Coenzyme A deh... 43 0.031
AM398681_341(AM398681|pid:none) Flavobacterium psychrophilum JIP... 43 0.031
AY742811_1(AY742811|pid:none) Macaca fascicularis ACADSB mRNA, p... 43 0.031
CP000910_2114(CP000910|pid:none) Renibacterium salmoninarum ATCC... 43 0.031
CP000384_4130(CP000384|pid:none) Mycobacterium sp. MCS, complete... 43 0.031
CP000323_1532(CP000323|pid:none) Psychrobacter cryohalolentis K5... 43 0.031
CP000478_1358(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 43 0.031
T45286(T45286) butyryl-CoA dehydrogenase (EC 1.3.99.2) [imported... 43 0.031
CP000680_891(CP000680|pid:none) Pseudomonas mendocina ymp, compl... 43 0.031
CP001078_330(CP001078|pid:none) Clostridium botulinum E3 str. Al... 43 0.031
CP001365_1129(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 43 0.031
CP000480_5089(CP000480|pid:none) Mycobacterium smegmatis str. MC... 43 0.031
CP000634_742(CP000634|pid:none) Agrobacterium vitis S4 chromosom... 43 0.040
CP000250_4055(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 43 0.040
CP000386_2428(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 43 0.040
CP000656_4573(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 43 0.040
AP008957_1832(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 43 0.040
AE015451_4020(AE015451|pid:none) Pseudomonas putida KT2440 compl... 43 0.040
CP000926_3637(CP000926|pid:none) Pseudomonas putida GB-1, comple... 43 0.040
CP001581_2242(CP001581|pid:none) Clostridium botulinum A2 str. K... 43 0.040
BT077567_1(BT077567|pid:none) Lepeophtheirus salmonis Pacific fo... 43 0.040
CP000356_1516(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 43 0.040
CP000136_69(CP000136|pid:none) Rhizobium etli CFN 42 plasmid p42... 43 0.040
CP000774_821(CP000774|pid:none) Parvibaculum lavamentivorans DS-... 43 0.040
BX572600_138(BX572600|pid:none) Rhodopseudomonas palustris CGA00... 43 0.040
CP000431_3915(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 43 0.040
AY596297_1753(AY596297|pid:none) Haloarcula marismortui ATCC 430... 43 0.040
CP000325_2333(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 42 0.052
CP000352_2522(CP000352|pid:none) Ralstonia metallidurans CH34, c... 42 0.052
CP001052_587(CP001052|pid:none) Burkholderia phytofirmans PsJN c... 42 0.052
AP009153_1701(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 42 0.052
AP009389_15(AP009389|pid:none) Pelotomaculum thermopropionicum S... 42 0.052
(P79273) RecName: Full=Short-chain specific acyl-CoA dehydrogena... 42 0.052
AM420293_5291(AM420293|pid:none) Saccharopolyspora erythraea NRR... 42 0.052
CP001087_4460(CP001087|pid:none) Desulfobacterium autotrophicum ... 42 0.052
AM295250_2396(AM295250|pid:none) Staphylococcus carnosus subsp. ... 42 0.052
AM920438_91(AM920438|pid:none) Penicillium chrysogenum Wisconsin... 42 0.052
EU908202_12(EU908202|pid:none) Planobispora rosea strain ATCC 53... 42 0.052
(Q3ZBF6) RecName: Full=Short-chain specific acyl-CoA dehydrogena... 42 0.052
BA000018_230(BA000018|pid:none) Staphylococcus aureus subsp. aur... 42 0.052
CP000283_354(CP000283|pid:none) Rhodopseudomonas palustris BisB5... 42 0.052
BA000028_3011(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 42 0.052
CP001393_1166(CP001393|pid:none) Anaerocellum thermophilum DSM 6... 42 0.052
CP000479_4885(CP000479|pid:none) Mycobacterium avium 104, comple... 42 0.052
CP001111_2604(CP001111|pid:none) Stenotrophomonas maltophilia R5... 42 0.052
CP000283_3092(CP000283|pid:none) Rhodopseudomonas palustris BisB... 42 0.052
CP000830_2344(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 42 0.052
EU016664_19(EU016664|pid:none) Uncultured marine microorganism H... 42 0.052
AP002539_22(AP002539|pid:none) Oryza sativa Japonica Group genom... 42 0.068
CP000431_4546(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 42 0.068
CP000863_3250(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 42 0.068
CP000509_266(CP000509|pid:none) Nocardioides sp. JS614, complete... 42 0.068
CP000270_376(CP000270|pid:none) Burkholderia xenovorans LB400 ch... 42 0.068
CP001628_2205(CP001628|pid:none) Micrococcus luteus NCTC 2665, c... 42 0.068
AP009510_598(AP009510|pid:none) Uncultured Termite group 1 bacte... 42 0.068
CP001172_450(CP001172|pid:none) Acinetobacter baumannii AB307-02... 42 0.068
CU468230_420(CU468230|pid:none) Acinetobacter baumannii str. SDF... 42 0.068
AK298638_1(AK298638|pid:none) Homo sapiens cDNA FLJ57418 complet... 42 0.068
CP000853_626(CP000853|pid:none) Alkaliphilus oremlandii OhILAs, ... 42 0.068
AP008955_5496(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 42 0.068
CP000927_3044(CP000927|pid:none) Caulobacter sp. K31, complete g... 42 0.068
CP000699_4200(CP000699|pid:none) Sphingomonas wittichii RW1, com... 42 0.068
AL831821_1(AL831821|pid:none) Homo sapiens mRNA; cDNA DKFZp451K2... 42 0.068
CP000001_4992(CP000001|pid:none) Bacillus cereus E33L, complete ... 42 0.068
CP000150_799(CP000150|pid:none) Burkholderia sp. 383 chromosome ... 42 0.068
CP000383_3341(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 42 0.068
CU633750_2229(CU633750|pid:none) Cupriavidus taiwanensis str. LM... 42 0.068
CP000150_654(CP000150|pid:none) Burkholderia sp. 383 chromosome ... 42 0.068
AE017333_3300(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 42 0.089
CP000511_4595(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 42 0.089
CP001618_3826(CP001618|pid:none) Beutenbergia cavernae DSM 12333... 42 0.089
CP000485_4598(CP000485|pid:none) Bacillus thuringiensis str. Al ... 42 0.089
CP000509_1420(CP000509|pid:none) Nocardioides sp. JS614, complet... 42 0.089
CP001340_1410(CP001340|pid:none) Caulobacter crescentus NA1000, ... 42 0.089
CP000724_2988(CP000724|pid:none) Alkaliphilus metalliredigens QY... 42 0.089
CR555306_1076(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 42 0.089
AE000782_951(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304,... 42 0.089
AE005673_1343(AE005673|pid:none) Caulobacter crescentus CB15, co... 42 0.089
CR936257_1304(CR936257|pid:none) Natronomonas pharaonis DSM 2160... 42 0.089
AM998794_3(AM998794|pid:none) Clostridium saccharobutylicum ORF1... 42 0.089
BA000043_3394(BA000043|pid:none) Geobacillus kaustophilus HTA426... 42 0.089
AC006625_6(AC006625|pid:none) Caenorhabditis elegans cosmid C55B... 42 0.089
CP000362_3680(CP000362|pid:none) Roseobacter denitrificans OCh 1... 42 0.089
CP000781_4672(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 41 0.12
BX571965_61(BX571965|pid:none) Burkholderia pseudomallei strain ... 41 0.12
BX572596_47(BX572596|pid:none) Rhodopseudomonas palustris CGA009... 41 0.12
CP000448_2058(CP000448|pid:none) Syntrophomonas wolfei subsp. wo... 41 0.12
CP001635_118(CP001635|pid:none) Variovorax paradoxus S110 chromo... 41 0.12
CR555306_1685(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 41 0.12
CP000267_4100(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 41 0.12
CP000383_3531(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 41 0.12
CP000922_2453(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 41 0.12
AL646053_653(AL646053|pid:none) Ralstonia solanacearum GMI1000 m... 41 0.12
CP001636_877(CP001636|pid:none) Variovorax paradoxus S110 chromo... 41 0.12
CP000507_2786(CP000507|pid:none) Shewanella amazonensis SB2B, co... 41 0.12
CP000124_278(CP000124|pid:none) Burkholderia pseudomallei 1710b ... 41 0.12
CP000875_4371(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 41 0.12
AF155831_2(AF155831|pid:none) Bacillus cereus zwittermicin A bio... 41 0.12
CP001096_1164(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 41 0.12
CP000076_5012(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 41 0.12
CP000821_1456(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 41 0.12
CP001010_868(CP001010|pid:none) Polynucleobacter necessarius sub... 41 0.12
EU293887_3(EU293887|pid:none) Bacillus thuringiensis nonribosoma... 41 0.12
EF085075_1(EF085075|pid:none) Picea sitchensis clone WS02713_M11... 41 0.12
EU637020_9(EU637020|pid:none) Philodina roseola peptidylprolyl i... 41 0.12
CP000152_1393(CP000152|pid:none) Burkholderia sp. 383 chromosome... 41 0.12
CP001392_117(CP001392|pid:none) Diaphorobacter sp. TPSY, complet... 41 0.12
CR931997_1549(CR931997|pid:none) Corynebacterium jeikeium K411 c... 41 0.12
AM902716_367(AM902716|pid:none) Bordetella petrii strain DSM 128... 41 0.12
CU694399_4(CU694399|pid:none) Ralstonia solanacearum strain MolK... 41 0.15
AP008934_2425(AP008934|pid:none) Staphylococcus saprophyticus su... 41 0.15
CP000157_2215(CP000157|pid:none) Erythrobacter litoralis HTCC259... 41 0.15
CP000577_2937(CP000577|pid:none) Rhodobacter sphaeroides ATCC 17... 41 0.15
AP008226_1938(AP008226|pid:none) Thermus thermophilus HB8 genomi... 41 0.15
AE016958_3878(AE016958|pid:none) Mycobacterium avium subsp. para... 41 0.15
CU914166_689(CU914166|pid:none) Ralstonia solanacearum strain IP... 41 0.15
CP000249_1176(CP000249|pid:none) Frankia sp. CcI3, complete geno... 41 0.15
AE017221_1569(AE017221|pid:none) Thermus thermophilus HB27, comp... 41 0.15
CP000557_2916(CP000557|pid:none) Geobacillus thermodenitrificans... 41 0.15
CP001252_1491(CP001252|pid:none) Shewanella baltica OS223, compl... 41 0.15
CP000830_834(CP000830|pid:none) Dinoroseobacter shibae DFL 12, c... 41 0.15
CP001348_962(CP001348|pid:none) Clostridium cellulolyticum H10, ... 41 0.15
CP001615_810(CP001615|pid:none) Exiguobacterium sp. AT1b, comple... 41 0.15
AP011115_2365(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 41 0.15
CP000141_1685(CP000141|pid:none) Carboxydothermus hydrogenoforma... 41 0.15
CP000744_4947(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 41 0.15
CP000264_3069(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 41 0.15
AP011115_2597(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 41 0.15
CP000891_2957(CP000891|pid:none) Shewanella baltica OS195, compl... 41 0.15
CP001283_2281(CP001283|pid:none) Bacillus cereus AH820, complete... 41 0.15
CP000511_1827(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 41 0.15
BC123880_1(BC123880|pid:none) Bos taurus acyl-Coenzyme A dehydro... 41 0.15
AJ720541_1(AJ720541|pid:none) Gallus gallus mRNA for hypothetica... 41 0.15
AM412317_2183(AM412317|pid:none) Clostridium botulinum A str. AT... 41 0.15
CP000563_2776(CP000563|pid:none) Shewanella baltica OS155, compl... 41 0.15
CP001192_14(CP001192|pid:none) Rhizobium leguminosarum bv. trifo... 41 0.15
CP001147_556(CP001147|pid:none) Thermodesulfovibrio yellowstonii... 41 0.15
AM494964_101(AM494964|pid:none) Leishmania braziliensis chromoso... 41 0.15
AF462227_1(AF462227|pid:none) Narcissus pseudonarcissus putative... 41 0.15
CP000874_2057(CP000874|pid:none) Rhizobium sp. NGR234 plasmid pN... 40 0.20
DQ987698_3(DQ987698|pid:none) Roseburia intestinalis strain L1-8... 40 0.20
AP011117_102(AP011117|pid:none) Rhodococcus opacus B4 plasmid pR... 40 0.20
CP000359_425(CP000359|pid:none) Deinococcus geothermalis DSM 113... 40 0.20
CP000352_2521(CP000352|pid:none) Ralstonia metallidurans CH34, c... 40 0.20
AM181176_817(AM181176|pid:none) Pseudomonas fluorescens SBW25 co... 40 0.20
CP000158_664(CP000158|pid:none) Hyphomonas neptunium ATCC 15444,... 40 0.20
AX066497_1(AX066497|pid:none) Sequence 79 from Patent WO0100805.... 40 0.20
CP000382_1971(CP000382|pid:none) Clostridium novyi NT, complete ... 40 0.20
AP009384_3558(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 40 0.20
CP001322_1155(CP001322|pid:none) Desulfatibacillum alkenivorans ... 40 0.20
AP011115_3824(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 40 0.20
CP001322_3889(CP001322|pid:none) Desulfatibacillum alkenivorans ... 40 0.20
BA000043_3006(BA000043|pid:none) Geobacillus kaustophilus HTA426... 40 0.20
CP001275_37(CP001275|pid:none) Thermomicrobium roseum DSM 5159, ... 40 0.20
AK005140_1(AK005140|pid:none) Mus musculus adult male cerebellum... 40 0.20
CP000094_4691(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 40 0.20
CP000386_2227(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 40 0.20
EF152775_1(EF152775|pid:none) Azoarcus sp. CIB GcdH (gcdH) and G... 40 0.20
AX813811_1(AX813811|pid:none) Sequence 51 from Patent WO03040292... 40 0.20
AP009044_377(AP009044|pid:none) Corynebacterium glutamicum R DNA... 40 0.20
CP000781_4627(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 40 0.20
CP001150_2695(CP001150|pid:none) Rhodobacter sphaeroides KD131 c... 40 0.20
(P51174) RecName: Full=Long-chain specific acyl-CoA dehydrogenas... 40 0.20
CP000656_4441(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 40 0.20
CP000481_403(CP000481|pid:none) Acidothermus cellulolyticus 11B ... 40 0.20
BX640451_10(BX640451|pid:none) Bordetella bronchiseptica strain ... 40 0.20
AB026669_6(AB026669|pid:none) Acinetobacter sp. NCIMB9871 cycloh... 40 0.20
CP000820_3968(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 40 0.20
AC124144_11(AC124144|pid:none) Oryza sativa (japonica cultivar-g... 40 0.20
CP000542_1695(CP000542|pid:none) Verminephrobacter eiseniae EF01... 40 0.20
CP000479_4591(CP000479|pid:none) Mycobacterium avium 104, comple... 40 0.20
CP000479_4883(CP000479|pid:none) Mycobacterium avium 104, comple... 40 0.20
AK018319_1(AK018319|pid:none) Mus musculus 10 days neonate cereb... 40 0.20
AK170217_1(AK170217|pid:none) Mus musculus NOD-derived CD11c +ve... 40 0.20
CP000124_3186(CP000124|pid:none) Burkholderia pseudomallei 1710b... 40 0.26
CP000086_1376(CP000086|pid:none) Burkholderia thailandensis E264... 40 0.26
AP011115_2384(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 40 0.26
BT042828_1(BT042828|pid:none) Zea mays full-length cDNA clone ZM... 40 0.26
EU959603_1(EU959603|pid:none) Zea mays clone 218822 glutaryl-CoA... 40 0.26
CU861906_761(CU861906|pid:none) Ralstonia solanacearum strain Mo... 40 0.26
AM420293_4503(AM420293|pid:none) Saccharopolyspora erythraea NRR... 40 0.26
AY596297_682(AY596297|pid:none) Haloarcula marismortui ATCC 4304... 40 0.26
CP000304_3141(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 40 0.26
AP008955_4897(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 40 0.26
CP000431_6723(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 40 0.26
CP000614_733(CP000614|pid:none) Burkholderia vietnamiensis G4 ch... 40 0.26
BX571965_2772(BX571965|pid:none) Burkholderia pseudomallei strai... 40 0.26
FJ618544_6(FJ618544|pid:none) Streptomyces toxytricini strain NR... 40 0.26
CR931997_194(CR931997|pid:none) Corynebacterium jeikeium K411 co... 40 0.26
CP000378_326(CP000378|pid:none) Burkholderia cenocepacia AU 1054... 40 0.26
CP000777_3124(CP000777|pid:none) Leptospira biflexa serovar Pato... 40 0.26
CR378678_213(CR378678|pid:none) Photobacterium profundum SS9 chr... 40 0.26
CP000479_2591(CP000479|pid:none) Mycobacterium avium 104, comple... 40 0.26
CP001341_733(CP001341|pid:none) Arthrobacter chlorophenolicus A6... 40 0.26
CP000875_3551(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 40 0.26
AE016958_1713(AE016958|pid:none) Mycobacterium avium subsp. para... 40 0.26
BC064210_1(BC064210|pid:none) Xenopus tropicalis acyl-Coenzyme A... 40 0.26
CU914168_2257(CU914168|pid:none) Ralstonia solanacearum strain I... 40 0.26
AE016958_3651(AE016958|pid:none) Mycobacterium avium subsp. para... 40 0.26
AP008957_2775(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 40 0.26
AM167904_900(AM167904|pid:none) Bordetella avium 197N complete g... 40 0.26
BC071366_1(BC071366|pid:none) Danio rerio acyl-Coenzyme A dehydr... 40 0.26
AE014296_1562(AE014296|pid:none) Drosophila melanogaster chromos... 40 0.26
AE007870_1381(AE007870|pid:none) Agrobacterium tumefaciens str. ... 40 0.26
CP000088_944(CP000088|pid:none) Thermobifida fusca YX, complete ... 40 0.34
CP000769_2145(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 40 0.34
AE017221_536(AE017221|pid:none) Thermus thermophilus HB27, compl... 40 0.34
AE017224_952(AE017224|pid:none) Brucella abortus biovar 1 str. 9... 40 0.34

>(O65201) RecName: Full=Acyl-coenzyme A oxidase 2, peroxisomal;
Short=AOX 2; EC=1.3.3.6; AltName:
Full=Long-chain acyl-CoA oxidase; Short=AtCX2;
Flags: Precursor; &AB013395_4(AB013395|pid:none)
Length = 692

Score = 142 bits (359), Expect = 3e-32
Identities = 75/208 (36%), Positives = 119/208 (57%), Gaps = 11/208 (5%)
Frame = +3

Query: 207 DFSQLLKTNINNRP----VIDMASDEHKAKTHRDAIEVCK-MGVLDVRVIQKDPKIFLSY 371
D + + N+RP I+++ D+H+ I + + GV R + DP+ + +
Sbjct: 73 DIQEKIFDFFNSRPDLQTPIEISKDDHRELCMNQLIGLVREAGVRPFRYVADDPEKYFAI 132

Query: 372 LTSLSSCDMSLMAKLVIHFQLFGGTILELGTEEHHNKYFPDIKTMRIVGGFGMTEMGHGS 551
+ ++ S DMSL K+ + + L+GG+++ LGT++H +KYF I + G F MTE+ HGS
Sbjct: 133 MEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYFDGIDNLDYTGCFAMTELHHGS 192

Query: 552 NVRQIETTAEYDHTTKEFIINSPTRSSTKFWIGNMAKYGTHIVLFCRLIY-----KG-ED 713
NV+ ++TTA +D EF+I++P + K+WIGN A +G +F RLI KG D
Sbjct: 193 NVQGLQTTATFDPLKDEFVIDTPNDGAIKWWIGNAAVHGKFATVFARLILPTHDSKGVSD 252

Query: 714 KGVHGIVTQIRDLDSKNVFPGIEIGDCG 797
GVH + IRD+ + PG+EI DCG
Sbjct: 253 MGVHAFIVPIRDMKTHQTLPGVEIQDCG 280

Score = 101 bits (252), Expect = 7e-20
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 3/201 (1%)
Frame = +1

Query: 814 RNEMDIFQTAEGDGAVLYQQLAKFLLSEYKKWYKKEGVT---GYIIKEVQTFLATSNPMY 984
RN+ DIFQT EGD VL QQ+A LL YK+ ++ +T Y+ + + T+L+ NP+
Sbjct: 465 RNDHDIFQTFEGDNTVLLQQVAADLLKRYKEKFQGGTLTVTWSYLRESMNTYLSQPNPVT 524

Query: 985 THTRSIPYILSNEFHHHAFLYRFERIRSTVIEKLSHSKSKKLTFLQSWNDSLLYIIDMAK 1164
++ +F AF YR R+ V +L SK L +WN L +++ +A+
Sbjct: 525 ARWEGEDHLRDPKFQLDAFRYRTSRLLQNVAARLQ-KHSKTLGGFGAWNRCLNHLLTLAE 583

Query: 1165 AYSHLYILEQSHLAIRRCQDPSTRHLLNDLIKLYALSNIEQDFAFFRNCNFLSSGKAFAI 1344
++ IL + A++ C DPS + L LYAL I +D +RN ++++ KA AI
Sbjct: 584 SHIETVILAKFIEAVKNCPDPSAKAALKLACDLYALDRIWKDIGTYRNVDYVAPNKAKAI 643

Query: 1345 SDAIKELCIGIKPYALQIINS 1407
+ L ++ A +++++
Sbjct: 644 HKLTEYLSFQVRNVAKELVDA 664

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,474,490,113
Number of extensions: 47603005
Number of successful extensions: 118362
Number of sequences better than 10.0: 913
Number of HSP's gapped: 118205
Number of HSP's successfully gapped: 978
Length of query: 565
Length of database: 1,051,180,864
Length adjustment: 134
Effective length of query: 431
Effective length of database: 617,481,958
Effective search space: 266134723898
Effective search space used: 266134723898
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.53 gvh: 0.24 alm: 0.37 top: 0.53 tms: 0.00 mit: 0.42 mip: 0.04
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

32.0 %: cytoplasmic
32.0 %: mitochondrial
24.0 %: nuclear
8.0 %: cytoskeletal
4.0 %: extracellular, including cell wall

>> prediction for Contig-U11701-1 is cyt

VS (DIR, S) 0
VH (FL, L) 2
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 2
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 5
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0