Contig-U11697-1
Contig ID Contig-U11697-1
Contig update 2002.12.18
Contig sequence
>Contig-U11697-1 (Contig-U11697-1Q) /CSM_Contig/Contig-U11697-1Q.Seq.d
ATATAAAAAATAAATTTTTATTTTAATGAAATAGAATAATAATAATAATT
TTAAAATAATAAAATAAAAATAAAATTCATTCAATATGAATAAAATAATA
GTTTTTTTAATCTTTTTTTTTATCGATTATAAATATAATACAATGTCAAT
CACCTTACCCTTATAATACAACATTAGGTTGTTCAATGTATGGCGTTTCA
TCTTCATTTGTTGAAGCAAAAGATTTTCCACCATTAAATAATACGGAAAT
CGCACCAAATACATGTCAATTAACACATCCAGAATATTCAATTGAATCAT
GTTGTAATTATAATCAAACTTTAATCTTACAAACCAATATGTTGGTAGCG
GGTGGTATATTTGGTAGATGTAGTAGTTGTATGGTTAATCTTTATAATCT
ATGGTGTGCATCGTCATGTTCACCCTATCAGAAATCATTTATGGTACCAA
CTAAAGTTGATAATAAAACTGACCAAATCATTAGCATCGATTTCGTTTTA
CATCCAGATTTCGCCAATGGTTTATATAATTCATGTAGAGATGTACATGC
CAATGGTGCTCAACCATTTGGTGTAATGTTTCCAACTGCACAATTGTTCT
TCACTGGTGTTTTCTCTGCAGTGAATCCAACATTCAAAGAATTAAATTGG
GTTTTTAATAATGAAGGTTATAATGATGCAATCGTACCATGTTCTGAAGG
TTGTTCTTGTGATCAATGTCGTGATGCTTGTTTACCTCCCCCTTCCTATA
AAGATATTGGTTTATTAAATGATACAATCATTCAAACTCATTTATTAATA
GAAGTACCACATTTAACAATTTGGATAGTTTGGTCATTTTTATTATTTTT
ATTATCATTATTATTTGGATTTAGCATTTGGTTAATATTTAAATATTCAT
CAAAGATTAGATATTTTAANGGTAAAAAGTTTAAAACAGTAATGATGATA
ATATTGGGTATTTTATTCATTTGTACAGTATTGATACCATTTGTAACTAC
TCATCAAATGATAGATGGTAAAACAGCAAGTTGTATGTGGAAATTAGATG
ATGGAAAAGAATGGAATTGTTCATTTGCAATGGGTGTATCCATTTATATA
ATGATAACATTATTGTTATTATCAATAGTAATTTTAGCTTGTATAATTGT
TGATAAAACAGCTTCAAATAGAAATTCAAGAAGAATACTTGGTATTAGTG
GTGGTATAATTAATCAACAAGTTAATAATGATGAAATTCAAAATACCAAT
AATAATAGAAATAATAACAATAATAGTGGTAGCAATTATTCAAATATTTT
TCAAAAAGTATTTTATTGGTATGGAATTAATATTACAAAAAGACCAATAA
TAGTTTTAATATGTTGTTTACTATTTACAATTGGTATTGGTATTGGTATT
ATTTCATTAGAGATTGAAACTGATCCAGTAAAATTATGGGTATCACCAGA
TAGTAGATCAGCAATTGAGAAACAATATTTCGATNATCATTTCGGTC---
-------CGGTCCATTCTATCGTGTTGAACAATTAATTTTAATACCAAAA
CAAAAGAATTTATCAACGATTTTCAATTATGATTTATTTAAATCATTAAT
TGATATAGAGACACAACTAATGAAGAATACAAGTGTAAAGCTTAATGATG
GTTCAAATAGGATTATAACATTGGATCAATTATGTTTTGAACCTACTAAA
CGTGGTTGTTTGGTTGAGAGTATAACAGGTATTTTTCAACGTGATCAAAA
TAAATTAAATCAACAAAAGGATAATGTAATTGGTTGGTTTGAACAATGTA
AATCACAATTACTTTCACCAGAATGTATGGATTCAACTGGTGTACCTGTA
AATCCAAAGATAGTATTGGGTGGTTGGAATGATAATTCAACGTTGGCAAA
AGCATTTGTCACCACTTTCCTATTGAATAATCCAGATTCAATGATTGATA
GATCAATGATGTGGGAACAAGTTTGGTTAAATAAAATTCAAGAGATTTCA
AATGATCCTTCATGTCCATTCGAAATATCATTCAATGCTCAAAGATCAGT
ACAAGATGAATTGGCAAGAGAAGGTAATGCAGATATACCAACGATTATCG
TTAGTTATTTCGTTATGTTTTTATATATCTCCCTTAGTTTAGGTAGTTAT
TACCCATTTCCAAGAAGATTCAATTCATTTTTCATTCGTTCAAGATTTGC
ATTGGGTCTATCTGGTATTTGTATAGTTGCATGTTCAATTATAATCTCTG
TTGGTATTTGTCCAATTCTACGTATAAAAGCAACTCTAATCATTAGTGAA
GTTATACCATTCTTAGTGTTAGCCATTGGTGTTGATAATATATTCATTTT
AGTAAATACTTTTGAATCTTTACATGTTGCATCATCATCATCATCATCAT
CAATTAGTGGTTTTAATCAAAATCATCATCAAATGCCAACACCAGAAGAA
TCATTTGCTCGTACACTTGCAAAGGTTGGTCCATCAATTGCATTAGCATC
ATTAAGTGAATCATTTGCTTTCCTATTAGGTTCCTTAACTAAAATGCCAG
CAGTAAAAGCATTTTCATTCTATGCTTCAATTGCAGTTTTCTTTGACTTC
CTATTACAAATTAGTGCATTCGCTTGTTTATTAGTTTTAGATACAAAACG
TTTACAATCAAGAAGAGTTGATTGTTTACCATGCTTATCATTAAATGGTG
ATAATTCAGATTTAGAAGATGATCCATTTGATAATATTGATCAACAATTA
AATAGTAATAATAATAATAATAATAATAATCTTAATAACAATGATAACAA
TAATAATAATAATCAAGAAGAAATTGAAAATGAACCACTTTTAATTAATG
GTGAAGATGATGATAGAAATGATAATGCTCATAATTTTAATTATGATGTT
GATGCATTAAATGTTGTTGAGGTTTAAATATTAATAATGAAGAATCATCA
CCATTATCAAAAAAGAGAAGGTTAAAAAAGAAATCAAAAAAGAANACAAC
ATTATTAAAGGAATTATTTACAAAATATTATGCTCCATTTTTAGTTCATC
CAATTTCAAAATTATTAATTATAATATTCTTTATTGCAATGTTATTGTTT
TCAATAAATTATGCATATCAAATTCCAATTGGTTTAGATCAAAAGGTTGC
ACTACCAAGAAACTCTTATCTTCAAGCTTATTTCACAAATATGAATCAAT
TCTTAGAGGTTGGACCACCAATGTATATATGTTGTAAAAGGAAATTATGA
TTTCTCCATACCATCAATTCAAAATCAATTTTGTACAGTAGGTGGTTGTA
ATAATAATTCAGTTATAAATACATTTGATAATGCACCATTCATTTCACCT
GGAATTTCATCATGGTTAGATGATATGTTACGATGGAGTAATACTGTCGG
TTGTTGTACAGCATTCGATAATGGTACCTATTGTAATAGTGATGAACCTG
GTTGTGATCAACAATGTTTCCCATTGGAAAAATCTGGTAGACCCGATCCA
TCACTATTTAAAAAGTATTTACCTGCATTTTTAAATTTCACAAATACAGA
TCAATGTCCATTGGCAGGTTTAGCATATACTGGTGATGTAAAATTCAATA
GTGATGGTAGTATTGCAGCAACTCGTTTCGATGCTTATCATACAACTCTA
AGAACTCAAAATGATTTCATCAATGCACTTGCCCACAAGTTATTATTTGG
CTGACCATTCAGATGCTCAAGTTTTCACTTATAGTATTTTCTATTGTTAC
TTTGAAGCTTATTTAACCATAAAACAAGTGGCATTAAAAGGTATTTTATT
GGCATTGGGAAGTGTATTTTTCGTATCACTAGCTATATTAATGAATCCAT
TGGTTTCAATATTGGTTGTACTTTGTGTTGGTATGACGGTTGTTGACCTT
TTGGCCGTCATGACATTATGGGATATATTTTTGAATGCAATCTCTGTCGT
AAATTTAATTATGGCTGTTGGTATATCAATAGAATTTTGCGTTCATATTG
CAAGTACATTCATCAGATCACCAAAACATTATTCAAGAGATGAAAAGGTT
AAATTTGCAATATCAGAAATGGGTGCAAACATATTTAGTGGTATCTTTAT
CACAAAACTTTTAGGTTGTGTAGTTTTAGCTTTTTCAAAATCAGAAATCT
TTATCATATACTATTTCAAAATGTATATAAGTATTTGTTTATTAGCAGCT
GTTCATGGTTTAGTCTTATTACCAGTTTTATTATCAATATTTGGTACAAA
CAAATTTTCTTTTGAAAAATTTTTAACTTTTAAAAAAGTATAGTTAAAAA
TAATAAAATAATAAAATAAAAAATAAAAAATAAAAATACAAAGAAAAAAA
AAAAAAAAAAAAAA

Gap gap included
Contig length 4354
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 7063353
End point 7058997
Strand (PLUS/MINUS) MINUS
Number of clones 22
Number of EST 39
Link to clone list U11697
List of clone(s)

est1=SHI779F,1,639
est2=SHI428F,35,696
est3=CHN149F,38,657
est4=SHD250F,41,660
est5=CHM468F,51,366
est6=CHF390F,53,661
est7=CHE657F,58,698
est8=CHH438F,58,660
est9=SHL321F,60,698
est10=VFG508F,235,825
est11=VHF794F,386,702
est12=CHR479F,389,501
est13=CHL822F,718,1252
est14=VFG508Z,927,1498
est15=SHG673F,1499,2126
est16=CHM468Z,1981,2753
est17=CHF390Z,2205,2960
est18=SHL321Z,2213,2928
est19=SHD250Z,2215,2919
est20=CHE657Z,2242,2955
est21=CHH438Z,2249,2960
est22=CHR479Z,2305,2553
est23=VHF794Z,2433,2560
est24=CHN149Z,2517,2943
est25=AFL136F,2915,3282
est26=CFE234F,2991,3636
est27=CFB741F,3010,3572
est28=CHE457F,3020,3335
est29=CHC306F,3094,3746
est30=SLB571F,3231,3753
est31=SSC435Z,3434,4362
est32=SHG673Z,3559,4346
est33=CFB741Z,3591,4178
est34=CHE457Z,3623,4300
est35=SSC781Z,3646,4360
est36=CFE234Z,3895,4305
est37=SLB571Z,3907,4344
est38=AFL136Z,3982,4179
est39=CHC306Z,4058,4274
Translated Amino Acid sequence
iknkflf**nriiiiilk**nknkihsi*ik**ff*SFFLSIINIIQCQSPYPYNTTLGC
SMYGVSSSFVEAKDFPPLNNTEIAPNTCQLTHPEYSIESCCNYNQTLILQTNMLVAGGIF
GRCSSCMVNLYNLWCASSCSPYQKSFMVPTKVDNKTDQIISIDFVLHPDFANGLYNSCRD
VHANGAQPFGVMFPTAQLFFTGVFSAVNPTFKELNWVFNNEGYNDAIVPCSEGCSCDQCR
DACLPPPSYKDIGLLNDTIIQTHLLIEVPHLTIWIVWSFLLFLLSLLFGFSIWLIFKYSS
KIRYFXGKKFKTVMMIILGILFICTVLIPFVTTHQMIDGKTASCMWKLDDGKEWNCSFAM
GVSIYIMITLLLLSIVILACIIVDKTASNRNSRRILGISGGIINQQVNNDEIQNTNNNRN
NNNNSGSNYSNIFQKVFYWYGINITKRPIIVLICCLLFTIGIGIGIISLEIETDPVKLWV
SPDSRSAIEKQYFDXHFG---

---GPFYRVEQLILIPKQKNLSTIFNYDLFKSLIDIETQLMKNTSVKLNDGSNRIITLDQ
LCFEPTKRGCLVESITGIFQRDQNKLNQQKDNVIGWFEQCKSQLLSPECMDSTGVPVNPK
IVLGGWNDNSTLAKAFVTTFLLNNPDSMIDRSMMWEQVWLNKIQEISNDPSCPFEISFNA
QRSVQDELAREGNADIPTIIVSYFVMFLYISLSLGSYYPFPRRFNSFFIRSRFALGLSGI
CIVACSIIISVGICPILRIKATLIISEVIPFLVLAIGVDNIFILVNTFESLHVASSSSSS
SISGFNQNHHQMPTPEESFARTLAKVGPSIALASLSESFAFLLGSLTKMPAVKAFSFYAS
IAVFFDFLLQISAFACLLVLDTKRLQSRRVDCLPCLSLNGDNSDLEDDPFDNIDQQLNSN
NNNNNNNLNNNDNNNNNNQEEIENEPLLINGEDDDRNDNAHNFNYDVDALNVVEV*ilim
knhhhyqkreg*krnqkrxqhy*rnylqnimlhf*fiqfqny*l*ysllqcycfq*imhi
kfqlv*ikrlhyqetlifklisqi*ins*rldhqciyvvkgnydfsipsiqnqfctvggc
nnnsvintfdnapfispgisswlddmlrwsntvgcctafdngtycnsdepgcdqqcfple
ksgrpdpslfkkylpaflnftntdqcplaglaytgdvkfnsdgsiaatrfdayhttlrtq
ndfinalahkllfg*pfrcssfhl*yfllll*slfnhktsgikryfigigkcifritsyi
nesigfnigctlcwydgc*pfgrhdimgyifecnlcrkfnygcwyinrilrsyckyihqi
tktlfkr*kg*icnirngckhi*wylyhktfrlcsfsffkirnlyhilfqnvykylfiss
cswfslitsfiiniwykqiff*kifnf*ksivknnkiik*kiknkntkkkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
i*kinfyfneie****f*nnkikikfiqye*nnsffnlffyrl*i*ynvnhltliiqh*v
vqcmafhlhllkqkifhh*iirkshqihvn*hiqniqlnhvviiikl*sykpicw*rvvy
lvdvvvvwlifiiygvhrhvhpirnhlwyqlkliikltkslasisfyiqispmvyiihve
mympmvlnhlv*cfqlhncsslvfslq*iqhskn*igflimkvimmqsyhvlkvvlvinv
vmlvylplpikilvy*miqsfkliy**kyhi*qfg*fghfyyfyyhyyldlafg*ylnih
qrldilxvkslkq****ywvfysfvqy*yhl*llik**mvkqqvvcgn*mmekngivhlq
wvypfi***hycyyq**f*lv*llikqlqieiqeeylvlvvv*linklimmkfkipiiie
iitiivvaiiqiffkkyfigmelilqkdq**f*yvvyylqlvlvlvlfh*rlkliq*nyg
yhqivdqqlrnnisxiisv---

---rsilsc*tinfntktkefindfql*fi*iin*yrdttneeykcka**wfk*dynigs
imf*ty*twlfg*eynryfst*sk*ikstkg*cnwlv*tm*ititftrmygfnwctcksk
dsigwle**fnvgksichhfpie*srfnd**indvgtslvk*nsrdfk*sfmsirniiqc
skistr*igkrr*crytndyr*lfryvfiylp*fr*llpiskkiqfifhsfkicigsiwy
lyscmfnynlcwylsnstyksnsnh**sytilsvshwc**yihfskyf*iftcciiiiii
in*wf*sksssnantrriicsytckgwsincisiik*iicfpirfln*nassksifilcf
ncsfl*lpitn*cirlfisfryktftikks*lftmliikw**frfrr*si**y*stik**
*******s**q**q****srrn*k*ttfn*w*r***k**cs*f*l*c*cikcc*glninn
eessplskkrrlkkkskkxttllkelftkyyapflvhpisklliiiffiamllfsinyay
qipigldqkvalprnsylqayftnmnqflevgppmyicckrkl*flhtinsksilysrwl
***fsykyi**ctihftwnfimvr*yvtme*ycrllysir*wyll****twl*stmfpig
kiw*trsiti*kvftcifkfhkyrsmsigrfsiyw*ckiq**w*ycsnsfrclsynskns
k*fhqctcpqviiwltiqmlkfslivfsivtlkli*p*nkwh*kvfywhwevyfsyh*ly
**ihwfqywlyfvlv*rlltfwps*hygiyf*mqsls*i*lwllvyq*nfafilqvhssd
hqniiqemkrlnlqyqkwvqtylvvslsqnf*vv*f*lfqnqkslsytiskci*vfvy*q
lfmv*syyqfyyqylvqtnfllknf*llkkys*k**nnkiknkk*kykekkkkkk

Frame B:
ykk*ifilmk*nnnnnfkiik*k*nsfnmnkiivflifffidykyntmsitlpl*ynirl
fnvwrfific*skrfstik*ygnrtkymsintsrifn*iml*l*snfnltnqyvgsgwyi
w*m**lyg*sl*smvcivmftlseiiygtn*s***n*pnh*hrfrftsrfrqwfi*fm*r
ctcqwcstiwcnvsnctivlhwcflcsesniqriklgf***rl**cnrtmf*rlfl*sms
*clftspfl*rywfik*ynhsnsfinrsttfnnldslvifiifiiiiiwi*hlvni*ifi
kd*if*x*kv*nsnddnigyfihlysidticnyssndrw*nsklyveir*wkrmelficn
gcihlyndniiviinsnfslync**nsfk*kfkkntwy*wwyn*sts****nskyq***k
**q**w*qlfkyfsksillvwn*yykktnnsfnmlftiynwywywyyfird*n*sskimg
itr**isn*etifrxsfr---

---GPFYRVEQLILIPKQKNLSTIFNYDLFKSLIDIETQLMKNTSVKLNDGSNRIITLDQ
LCFEPTKRGCLVESITGIFQRDQNKLNQQKDNVIGWFEQCKSQLLSPECMDSTGVPVNPK
IVLGGWNDNSTLAKAFVTTFLLNNPDSMIDRSMMWEQVWLNKIQEISNDPSCPFEISFNA
QRSVQDELAREGNADIPTIIVSYFVMFLYISLSLGSYYPFPRRFNSFFIRSRFALGLSGI
CIVACSIIISVGICPILRIKATLIISEVIPFLVLAIGVDNIFILVNTFESLHVASSSSSS
SISGFNQNHHQMPTPEESFARTLAKVGPSIALASLSESFAFLLGSLTKMPAVKAFSFYAS
IAVFFDFLLQISAFACLLVLDTKRLQSRRVDCLPCLSLNGDNSDLEDDPFDNIDQQLNSN
NNNNNNNLNNNDNNNNNNQEEIENEPLLINGEDDDRNDNAHNFNYDVDALNVVEV*ilim
knhhhyqkreg*krnqkrxqhy*rnylqnimlhf*fiqfqny*l*ysllqcycfq*imhi
kfqlv*ikrlhyqetlifklisqi*ins*rldhqciyvvkgnydfsipsiqnqfctvggc
nnnsvintfdnapfispgisswlddmlrwsntvgcctafdngtycnsdepgcdqqcfple
ksgrpdpslfkkylpaflnftntdqcplaglaytgdvkfnsdgsiaatrfdayhttlrtq
ndfinalahkllfg*pfrcssfhl*yfllll*slfnhktsgikryfigigkcifritsyi
nesigfnigctlcwydgc*pfgrhdimgyifecnlcrkfnygcwyinrilrsyckyihqi
tktlfkr*kg*icnirngckhi*wylyhktfrlcsfsffkirnlyhilfqnvykylfiss
cswfslitsfiiniwykqiff*kifnf*ksivknnkiik*kiknkntkkkkkkkk

Frame C:
iknkflf**nriiiiilk**nknkihsi*ik**ff*SFFLSIINIIQCQSPYPYNTTLGC
SMYGVSSSFVEAKDFPPLNNTEIAPNTCQLTHPEYSIESCCNYNQTLILQTNMLVAGGIF
GRCSSCMVNLYNLWCASSCSPYQKSFMVPTKVDNKTDQIISIDFVLHPDFANGLYNSCRD
VHANGAQPFGVMFPTAQLFFTGVFSAVNPTFKELNWVFNNEGYNDAIVPCSEGCSCDQCR
DACLPPPSYKDIGLLNDTIIQTHLLIEVPHLTIWIVWSFLLFLLSLLFGFSIWLIFKYSS
KIRYFXGKKFKTVMMIILGILFICTVLIPFVTTHQMIDGKTASCMWKLDDGKEWNCSFAM
GVSIYIMITLLLLSIVILACIIVDKTASNRNSRRILGISGGIINQQVNNDEIQNTNNNRN
NNNNSGSNYSNIFQKVFYWYGINITKRPIIVLICCLLFTIGIGIGIISLEIETDPVKLWV
SPDSRSAIEKQYFDXHFG---

---vhsivlnn*f*yqnkriyqrfsimiylnh*li*rhn**riqv*slmmvqigl*hwin
yvlnllnvvvwlrv*qvffnvikin*inkrim*lvglnnvnhnyfhqnvwiqlvyl*iqr
*ywvvgmiiqrwqkhlsplsy*iiqiq*lidq*cgnkfg*ikfkrfqmilhvhskyhsml
kdqykmnwqekvmqiyqrlslvislcfyisplv*vvithfqedsihfsfvqdlhwvylvf
v*lhvql*sllvfvqfyv*kql*slvklyhs*c*plvliiysf**illnlymlhhhhhhh
qlvvlikiiikcqhqknhllvhlqrlvhqlh*hh*vnhllsy*vp*lkcqq*khfhsmlq
lqfsltsyyklvhslvy*f*iqnvynqeelivyhayh*mviiqi*kmihliilinn*ivi
iiiiiiilitmitiiiiikkklkmnhf*lmvkmmiemimliilimmlmh*mllrfky***
riitiikkekvkkeikkexniikgiiykilcsifsssnfkiinynilycnvivfnklcis
nsnwfrskgcttkkllssslfhkyesilrgwttnvyml*keimispyhqfkinfvq*vvv
iiiql*ihlimhhsfhlefhhg*micydgvilsvvvqhsimvpivivmnlvvinnvshwk
nlvdpihhylksiylhf*isqiqinvhwqv*hilvm*nsivmvvlqqlvsmliiql*elk
missmhlptsyyladhsdaqvftysifycyfeayltikqvalkgillalgsvffvslail
mnplvsilvvlcvgmtvvdllavmtlwdiflnaisvvnlimavgisiefcvhiastfirs
pkhysrdekvkfaisemganifsgifitkllgcvvlafskseifiiyyfkmyisicllaa
vhglvllpvllsifgtnkfsfekfltfkkv*lkiik**nkk*kikiqrkkkkkk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11697-1 (Contig-U11697-1Q)
/CSM_Contig/Contig-U11697-1Q.Seq.d
(4364 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11697-1 (Contig-U11697-1Q) /CSM_Contig/Conti... 2480 0.0
Contig-U13062-1 (Contig-U13062-1Q) /CSM_Contig/Conti... 680 0.0
Contig-U14805-1 (Contig-U14805-1Q) /CSM_Contig/Conti... 42 0.005
Contig-U14123-1 (Contig-U14123-1Q) /CSM_Contig/Conti... 42 0.005
Contig-U01127-1 (Contig-U01127-1Q) /CSM_Contig/Conti... 42 0.005
Contig-U14713-1 (Contig-U14713-1Q) /CSM_Contig/Conti... 40 0.020
Contig-U11923-1 (Contig-U11923-1Q) /CSM_Contig/Conti... 40 0.020
Contig-U10415-1 (Contig-U10415-1Q) /CSM_Contig/Conti... 40 0.020
Contig-U14520-1 (Contig-U14520-1Q) /CSM_Contig/Conti... 38 0.079
Contig-U14166-1 (Contig-U14166-1Q) /CSM_Contig/Conti... 38 0.079

>Contig-U11697-1 (Contig-U11697-1Q) /CSM_Contig/Contig-U11697-1Q.Seq.d
Length = 4364

Score = 2480 bits (1251), Expect = 0.0
Identities = 1254/1254 (100%)
Strand = Plus / Plus


Query: 2992 gaanacaacattattaaaggaattatttacaaaatattatgctccatttttagttcatcc 3051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2992 gaanacaacattattaaaggaattatttacaaaatattatgctccatttttagttcatcc 3051


Query: 3052 aatttcaaaattattaattataatattctttattgcaatgttattgttttcaataaatta 3111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3052 aatttcaaaattattaattataatattctttattgcaatgttattgttttcaataaatta 3111


Query: 3112 tgcatatcaaattccaattggtttagatcaaaaggttgcactaccaagaaactcttatct 3171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3112 tgcatatcaaattccaattggtttagatcaaaaggttgcactaccaagaaactcttatct 3171


Query: 3172 tcaagcttatttcacaaatatgaatcaattcttagaggttggaccaccaatgtatatatg 3231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3172 tcaagcttatttcacaaatatgaatcaattcttagaggttggaccaccaatgtatatatg 3231


Query: 3232 ttgtaaaaggaaattatgatttctccataccatcaattcaaaatcaattttgtacagtag 3291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3232 ttgtaaaaggaaattatgatttctccataccatcaattcaaaatcaattttgtacagtag 3291


Query: 3292 gtggttgtaataataattcagttataaatacatttgataatgcaccattcatttcacctg 3351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3292 gtggttgtaataataattcagttataaatacatttgataatgcaccattcatttcacctg 3351


Query: 3352 gaatttcatcatggttagatgatatgttacgatggagtaatactgtcggttgttgtacag 3411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3352 gaatttcatcatggttagatgatatgttacgatggagtaatactgtcggttgttgtacag 3411


Query: 3412 cattcgataatggtacctattgtaatagtgatgaacctggttgtgatcaacaatgtttcc 3471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3412 cattcgataatggtacctattgtaatagtgatgaacctggttgtgatcaacaatgtttcc 3471


Query: 3472 cattggaaaaatctggtagacccgatccatcactatttaaaaagtatttacctgcatttt 3531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3472 cattggaaaaatctggtagacccgatccatcactatttaaaaagtatttacctgcatttt 3531


Query: 3532 taaatttcacaaatacagatcaatgtccattggcaggtttagcatatactggtgatgtaa 3591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3532 taaatttcacaaatacagatcaatgtccattggcaggtttagcatatactggtgatgtaa 3591


Query: 3592 aattcaatagtgatggtagtattgcagcaactcgtttcgatgcttatcatacaactctaa 3651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3592 aattcaatagtgatggtagtattgcagcaactcgtttcgatgcttatcatacaactctaa 3651


Query: 3652 gaactcaaaatgatttcatcaatgcacttgcccacaagttattatttggctgaccattca 3711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3652 gaactcaaaatgatttcatcaatgcacttgcccacaagttattatttggctgaccattca 3711


Query: 3712 gatgctcaagttttcacttatagtattttctattgttactttgaagcttatttaaccata 3771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3712 gatgctcaagttttcacttatagtattttctattgttactttgaagcttatttaaccata 3771


Query: 3772 aaacaagtggcattaaaaggtattttattggcattgggaagtgtatttttcgtatcacta 3831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3772 aaacaagtggcattaaaaggtattttattggcattgggaagtgtatttttcgtatcacta 3831


Query: 3832 gctatattaatgaatccattggtttcaatattggttgtactttgtgttggtatgacggtt 3891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3832 gctatattaatgaatccattggtttcaatattggttgtactttgtgttggtatgacggtt 3891


Query: 3892 gttgaccttttggccgtcatgacattatgggatatatttttgaatgcaatctctgtcgta 3951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3892 gttgaccttttggccgtcatgacattatgggatatatttttgaatgcaatctctgtcgta 3951


Query: 3952 aatttaattatggctgttggtatatcaatagaattttgcgttcatattgcaagtacattc 4011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3952 aatttaattatggctgttggtatatcaatagaattttgcgttcatattgcaagtacattc 4011


Query: 4012 atcagatcaccaaaacattattcaagagatgaaaaggttaaatttgcaatatcagaaatg 4071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4012 atcagatcaccaaaacattattcaagagatgaaaaggttaaatttgcaatatcagaaatg 4071


Query: 4072 ggtgcaaacatatttagtggtatctttatcacaaaacttttaggttgtgtagttttagct 4131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4072 ggtgcaaacatatttagtggtatctttatcacaaaacttttaggttgtgtagttttagct 4131


Query: 4132 ttttcaaaatcagaaatctttatcatatactatttcaaaatgtatataagtatttgttta 4191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4132 ttttcaaaatcagaaatctttatcatatactatttcaaaatgtatataagtatttgttta 4191


Query: 4192 ttagcagctgttcatggtttagtcttattaccagttttattatcaatatttggt 4245
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4192 ttagcagctgttcatggtttagtcttattaccagttttattatcaatatttggt 4245


Score = 2123 bits (1071), Expect = 0.0
Identities = 1104/1104 (100%)
Strand = Plus / Plus


Query: 1276 gtggtagcaattattcaaatatttttcaaaaagtattttattggtatggaattaatatta 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1276 gtggtagcaattattcaaatatttttcaaaaagtattttattggtatggaattaatatta 1335


Query: 1336 caaaaagaccaataatagttttaatatgttgtttactatttacaattggtattggtattg 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1336 caaaaagaccaataatagttttaatatgttgtttactatttacaattggtattggtattg 1395


Query: 1396 gtattatttcattagagattgaaactgatccagtaaaattatgggtatcaccagatagta 1455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1396 gtattatttcattagagattgaaactgatccagtaaaattatgggtatcaccagatagta 1455


Query: 1456 gatcagcaattgagaaacaatatttcgatnatcatttcggtcnnnnnnnnnncggtccat 1515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1456 gatcagcaattgagaaacaatatttcgatnatcatttcggtcnnnnnnnnnncggtccat 1515


Query: 1516 tctatcgtgttgaacaattaattttaataccaaaacaaaagaatttatcaacgattttca 1575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1516 tctatcgtgttgaacaattaattttaataccaaaacaaaagaatttatcaacgattttca 1575


Query: 1576 attatgatttatttaaatcattaattgatatagagacacaactaatgaagaatacaagtg 1635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1576 attatgatttatttaaatcattaattgatatagagacacaactaatgaagaatacaagtg 1635


Query: 1636 taaagcttaatgatggttcaaataggattataacattggatcaattatgttttgaaccta 1695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1636 taaagcttaatgatggttcaaataggattataacattggatcaattatgttttgaaccta 1695


Query: 1696 ctaaacgtggttgtttggttgagagtataacaggtatttttcaacgtgatcaaaataaat 1755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1696 ctaaacgtggttgtttggttgagagtataacaggtatttttcaacgtgatcaaaataaat 1755


Query: 1756 taaatcaacaaaaggataatgtaattggttggtttgaacaatgtaaatcacaattacttt 1815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1756 taaatcaacaaaaggataatgtaattggttggtttgaacaatgtaaatcacaattacttt 1815


Query: 1816 caccagaatgtatggattcaactggtgtacctgtaaatccaaagatagtattgggtggtt 1875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1816 caccagaatgtatggattcaactggtgtacctgtaaatccaaagatagtattgggtggtt 1875


Query: 1876 ggaatgataattcaacgttggcaaaagcatttgtcaccactttcctattgaataatccag 1935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1876 ggaatgataattcaacgttggcaaaagcatttgtcaccactttcctattgaataatccag 1935


Query: 1936 attcaatgattgatagatcaatgatgtgggaacaagtttggttaaataaaattcaagaga 1995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1936 attcaatgattgatagatcaatgatgtgggaacaagtttggttaaataaaattcaagaga 1995


Query: 1996 tttcaaatgatccttcatgtccattcgaaatatcattcaatgctcaaagatcagtacaag 2055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1996 tttcaaatgatccttcatgtccattcgaaatatcattcaatgctcaaagatcagtacaag 2055


Query: 2056 atgaattggcaagagaaggtaatgcagatataccaacgattatcgttagttatttcgtta 2115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2056 atgaattggcaagagaaggtaatgcagatataccaacgattatcgttagttatttcgtta 2115


Query: 2116 tgtttttatatatctcccttagtttaggtagttattacccatttccaagaagattcaatt 2175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2116 tgtttttatatatctcccttagtttaggtagttattacccatttccaagaagattcaatt 2175


Query: 2176 catttttcattcgttcaagatttgcattgggtctatctggtatttgtatagttgcatgtt 2235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2176 catttttcattcgttcaagatttgcattgggtctatctggtatttgtatagttgcatgtt 2235


Query: 2236 caattataatctctgttggtatttgtccaattctacgtataaaagcaactctaatcatta 2295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2236 caattataatctctgttggtatttgtccaattctacgtataaaagcaactctaatcatta 2295


Query: 2296 gtgaagttataccattcttagtgttagccattggtgttgataatatattcattttagtaa 2355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2296 gtgaagttataccattcttagtgttagccattggtgttgataatatattcattttagtaa 2355


Query: 2356 atacttttgaatctttacatgttg 2379
||||||||||||||||||||||||
Sbjct: 2356 atacttttgaatctttacatgttg 2379


Score = 1411 bits (712), Expect = 0.0
Identities = 712/712 (100%)
Strand = Plus / Plus


Query: 122 atcgattataaatataatacaatgtcaatcaccttacccttataatacaacattaggttg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atcgattataaatataatacaatgtcaatcaccttacccttataatacaacattaggttg 181


Query: 182 ttcaatgtatggcgtttcatcttcatttgttgaagcaaaagattttccaccattaaataa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttcaatgtatggcgtttcatcttcatttgttgaagcaaaagattttccaccattaaataa 241


Query: 242 tacggaaatcgcaccaaatacatgtcaattaacacatccagaatattcaattgaatcatg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tacggaaatcgcaccaaatacatgtcaattaacacatccagaatattcaattgaatcatg 301


Query: 302 ttgtaattataatcaaactttaatcttacaaaccaatatgttggtagcgggtggtatatt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttgtaattataatcaaactttaatcttacaaaccaatatgttggtagcgggtggtatatt 361


Query: 362 tggtagatgtagtagttgtatggttaatctttataatctatggtgtgcatcgtcatgttc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tggtagatgtagtagttgtatggttaatctttataatctatggtgtgcatcgtcatgttc 421


Query: 422 accctatcagaaatcatttatggtaccaactaaagttgataataaaactgaccaaatcat 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 accctatcagaaatcatttatggtaccaactaaagttgataataaaactgaccaaatcat 481


Query: 482 tagcatcgatttcgttttacatccagatttcgccaatggtttatataattcatgtagaga 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tagcatcgatttcgttttacatccagatttcgccaatggtttatataattcatgtagaga 541


Query: 542 tgtacatgccaatggtgctcaaccatttggtgtaatgtttccaactgcacaattgttctt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgtacatgccaatggtgctcaaccatttggtgtaatgtttccaactgcacaattgttctt 601


Query: 602 cactggtgttttctctgcagtgaatccaacattcaaagaattaaattgggtttttaataa 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cactggtgttttctctgcagtgaatccaacattcaaagaattaaattgggtttttaataa 661


Query: 662 tgaaggttataatgatgcaatcgtaccatgttctgaaggttgttcttgtgatcaatgtcg 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tgaaggttataatgatgcaatcgtaccatgttctgaaggttgttcttgtgatcaatgtcg 721


Query: 722 tgatgcttgtttacctcccccttcctataaagatattggtttattaaatgatacaatcat 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tgatgcttgtttacctcccccttcctataaagatattggtttattaaatgatacaatcat 781


Query: 782 tcaaactcatttattaatagaagtaccacatttaacaatttggatagtttgg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tcaaactcatttattaatagaagtaccacatttaacaatttggatagtttgg 833


Score = 680 bits (343), Expect = 0.0
Identities = 343/343 (100%)
Strand = Plus / Plus


Query: 2403 attagtggttttaatcaaaatcatcatcaaatgccaacaccagaagaatcatttgctcgt 2462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2403 attagtggttttaatcaaaatcatcatcaaatgccaacaccagaagaatcatttgctcgt 2462


Query: 2463 acacttgcaaaggttggtccatcaattgcattagcatcattaagtgaatcatttgctttc 2522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2463 acacttgcaaaggttggtccatcaattgcattagcatcattaagtgaatcatttgctttc 2522


Query: 2523 ctattaggttccttaactaaaatgccagcagtaaaagcattttcattctatgcttcaatt 2582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2523 ctattaggttccttaactaaaatgccagcagtaaaagcattttcattctatgcttcaatt 2582


Query: 2583 gcagttttctttgacttcctattacaaattagtgcattcgcttgtttattagttttagat 2642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2583 gcagttttctttgacttcctattacaaattagtgcattcgcttgtttattagttttagat 2642


Query: 2643 acaaaacgtttacaatcaagaagagttgattgtttaccatgcttatcattaaatggtgat 2702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2643 acaaaacgtttacaatcaagaagagttgattgtttaccatgcttatcattaaatggtgat 2702


Query: 2703 aattcagatttagaagatgatccatttgataatattgatcaac 2745
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2703 aattcagatttagaagatgatccatttgataatattgatcaac 2745


Score = 648 bits (327), Expect = 0.0
Identities = 330/330 (100%)
Strand = Plus / Plus


Query: 880 ggttaatatttaaatattcatcaaagattagatattttaanggtaaaaagtttaaaacag 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 ggttaatatttaaatattcatcaaagattagatattttaanggtaaaaagtttaaaacag 939


Query: 940 taatgatgataatattgggtattttattcatttgtacagtattgataccatttgtaacta 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 taatgatgataatattgggtattttattcatttgtacagtattgataccatttgtaacta 999


Query: 1000 ctcatcaaatgatagatggtaaaacagcaagttgtatgtggaaattagatgatggaaaag 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 ctcatcaaatgatagatggtaaaacagcaagttgtatgtggaaattagatgatggaaaag 1059


Query: 1060 aatggaattgttcatttgcaatgggtgtatccatttatataatgataacattattgttat 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1060 aatggaattgttcatttgcaatgggtgtatccatttatataatgataacattattgttat 1119


Query: 1120 tatcaatagtaattttagcttgtataattgttgataaaacagcttcaaatagaaattcaa 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1120 tatcaatagtaattttagcttgtataattgttgataaaacagcttcaaatagaaattcaa 1179


Query: 1180 gaagaatacttggtattagtggtggtataa 1209
||||||||||||||||||||||||||||||
Sbjct: 1180 gaagaatacttggtattagtggtggtataa 1209


Score = 287 bits (145), Expect = 5e-77
Identities = 145/145 (100%)
Strand = Plus / Plus


Query: 2814 caagaagaaattgaaaatgaaccacttttaattaatggtgaagatgatgatagaaatgat 2873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2814 caagaagaaattgaaaatgaaccacttttaattaatggtgaagatgatgatagaaatgat 2873


Query: 2874 aatgctcataattttaattatgatgttgatgcattaaatgttgttgaggtttaaatatta 2933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2874 aatgctcataattttaattatgatgttgatgcattaaatgttgttgaggtttaaatatta 2933


Query: 2934 ataatgaagaatcatcaccattatc 2958
|||||||||||||||||||||||||
Sbjct: 2934 ataatgaagaatcatcaccattatc 2958


>Contig-U13062-1 (Contig-U13062-1Q) /CSM_Contig/Contig-U13062-1Q.Seq.d
Length = 655

Score = 680 bits (343), Expect = 0.0
Identities = 343/343 (100%)
Strand = Plus / Plus


Query: 2403 attagtggttttaatcaaaatcatcatcaaatgccaacaccagaagaatcatttgctcgt 2462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 attagtggttttaatcaaaatcatcatcaaatgccaacaccagaagaatcatttgctcgt 206


Query: 2463 acacttgcaaaggttggtccatcaattgcattagcatcattaagtgaatcatttgctttc 2522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 acacttgcaaaggttggtccatcaattgcattagcatcattaagtgaatcatttgctttc 266


Query: 2523 ctattaggttccttaactaaaatgccagcagtaaaagcattttcattctatgcttcaatt 2582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ctattaggttccttaactaaaatgccagcagtaaaagcattttcattctatgcttcaatt 326


Query: 2583 gcagttttctttgacttcctattacaaattagtgcattcgcttgtttattagttttagat 2642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gcagttttctttgacttcctattacaaattagtgcattcgcttgtttattagttttagat 386


Query: 2643 acaaaacgtttacaatcaagaagagttgattgtttaccatgcttatcattaaatggtgat 2702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 acaaaacgtttacaatcaagaagagttgattgtttaccatgcttatcattaaatggtgat 446


Query: 2703 aattcagatttagaagatgatccatttgataatattgatcaac 2745
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aattcagatttagaagatgatccatttgataatattgatcaac 489


Score = 194 bits (98), Expect = 6e-49
Identities = 98/98 (100%)
Strand = Plus / Plus


Query: 2814 caagaagaaattgaaaatgaaccacttttaattaatggtgaagatgatgatagaaatgat 2873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 caagaagaaattgaaaatgaaccacttttaattaatggtgaagatgatgatagaaatgat 617


Query: 2874 aatgctcataattttaattatgatgttgatgcattaaa 2911
||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aatgctcataattttaattatgatgttgatgcattaaa 655


Score = 155 bits (78), Expect = 5e-37
Identities = 81/82 (98%)
Strand = Plus / Plus


Query: 2213 tggtatttgtatagttgcatgttcaattataatctctgttggtatttgtccaattctacg 2272
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 11 tggtatttgtatagttgcatgttcaattataatctctgttggtatttgttcaattctacg 70


Query: 2273 tataaaagcaactctaatcatt 2294
||||||||||||||||||||||
Sbjct: 71 tataaaagcaactctaatcatt 92


Score = 71.9 bits (36), Expect = 6e-12
Identities = 36/36 (100%)
Strand = Plus / Plus


Query: 2344 tcattttagtaaatacttttgaatctttacatgttg 2379
||||||||||||||||||||||||||||||||||||
Sbjct: 88 tcattttagtaaatacttttgaatctttacatgttg 123


>Contig-U14805-1 (Contig-U14805-1Q) /CSM_Contig/Contig-U14805-1Q.Seq.d
Length = 1126

Score = 42.1 bits (21), Expect = 0.005
Identities = 30/32 (93%), Gaps = 2/32 (6%)
Strand = Plus / Minus


Query: 3840 aatgaatccattggtttca--atattggttgt 3869
||||||||||||||||||| |||||||||||
Sbjct: 579 aatgaatccattggtttcacgatattggttgt 548


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 64,905
Number of Sequences: 6905
Number of extensions: 64905
Number of successful extensions: 7626
Number of sequences better than 10.0: 308
length of query: 4364
length of database: 5,674,871
effective HSP length: 17
effective length of query: 4347
effective length of database: 5,557,486
effective search space: 24158391642
effective search space used: 24158391642
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2008.11.25
Homology vs DNA
Query= Contig-U11697-1 (Contig-U11697-1Q) /CSM_Contig/Contig-U11697-1Q.Seq.d
(4364 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ395126) Dictyostelium discoideum cDNA clone:dds37a20, 5' ... 1245 0.0 1
(BJ413106) Dictyostelium discoideum cDNA clone:ddv14o01, 5' ... 1168 0.0 1
(BJ397390) Dictyostelium discoideum cDNA clone:dds46j05, 5' ... 1144 0.0 1
(BJ364372) Dictyostelium discoideum cDNA clone:ddc31a16, 5' ... 1142 0.0 1
(BJ395830) Dictyostelium discoideum cDNA clone:dds40h08, 5' ... 1140 0.0 1
(BJ407179) Dictyostelium discoideum cDNA clone:dds37a20, 3' ... 1068 0.0 2
(BJ376902) Dictyostelium discoideum cDNA clone:ddc30b16, 3' ... 1068 0.0 2
(BJ364740) Dictyostelium discoideum cDNA clone:ddc32d23, 5' ... 1061 0.0 1
(BJ365729) Dictyostelium discoideum cDNA clone:ddc36l10, 5' ... 1059 0.0 1
(BJ368892) Dictyostelium discoideum cDNA clone:ddc48a13, 5' ... 1053 0.0 1
(BJ396243) Dictyostelium discoideum cDNA clone:dds41n19, 5' ... 1027 0.0 1
(BJ373643) Dictyostelium discoideum cDNA clone:ddc4b11, 3' e... 928 0.0 3
(BJ363341) Dictyostelium discoideum cDNA clone:ddc26l01, 5' ... 890 0.0 3
(BJ361006) Dictyostelium discoideum cDNA clone:ddc9c10, 5' e... 817 0.0 2
(BJ383019) Dictyostelium discoideum cDNA clone:ddc46h18, 3' ... 773 0.0 2
(BJ360097) Dictyostelium discoideum cDNA clone:ddc4b11, 5' e... 690 0.0 2
(BJ408529) Dictyostelium discoideum cDNA clone:dds46j05, 3' ... 617 0.0 3
(BJ405069) Dictyostelium discoideum cDNA clone:dds30c14, 3' ... 617 0.0 3
(BJ378770) Dictyostelium discoideum cDNA clone:ddc32d23, 3' ... 617 0.0 4
(BJ378301) Dictyostelium discoideum cDNA clone:ddc31a16, 3' ... 617 0.0 4
(BJ379910) Dictyostelium discoideum cDNA clone:ddc36l10, 3' ... 609 0.0 4
(C84102) Dictyostelium discoideum slug cDNA, clone SSC781. 987 0.0 3
(BJ393208) Dictyostelium discoideum cDNA clone:dds30c14, 5' ... 603 0.0 2
(AU060812) Dictyostelium discoideum slug cDNA, clone SLB571. 880 0.0 2
(BJ409263) Dictyostelium discoideum cDNA clone:dds40h08, 3' ... 617 0.0 5
(AU051938) Dictyostelium discoideum slug cDNA, clone SSC435. 743 0.0 6
(BJ382564) Dictyostelium discoideum cDNA clone:ddc45l06, 3' ... 617 0.0 4
(BJ431443) Dictyostelium discoideum cDNA clone:ddv14o01, 3' ... 545 0.0 2
(BJ368069) Dictyostelium discoideum cDNA clone:ddc45l06, 5' ... 605 0.0 2
(BJ384163) Dictyostelium discoideum cDNA clone:ddc48a13, 3' ... 410 0.0 2
(BJ374609) Dictyostelium discoideum cDNA clone:ddc9c10, 3' e... 626 e-174 1
(AU033887) Dictyostelium discoideum slug cDNA, clone SLB571. 620 e-172 1
(BJ421507) Dictyostelium discoideum cDNA clone:ddv42l23, 5' ... 589 e-163 1
(BJ364181) Dictyostelium discoideum cDNA clone:ddc30b16, 5' ... 373 e-160 2
(BJ328206) Dictyostelium discoideum cDNA clone:dda23g09, 5' ... 264 e-150 3
(BJ368412) Dictyostelium discoideum cDNA clone:ddc46h18, 5' ... 480 e-130 1
(AF202725) Dictyostelium discoideum NPC1 protein mRNA, compl... 129 e-125 23
(AF202726) Dictyostelium discoideum NPC1 protein gene, compl... 129 e-125 23
(BJ377844) Dictyostelium discoideum cDNA clone:ddc26l01, 3' ... 311 1e-79 1
(BJ345319) Dictyostelium discoideum cDNA clone:dda23g09, 3' ... 248 2e-60 1
(BJ440183) Dictyostelium discoideum cDNA clone:ddv42l23, 3' ... 242 9e-59 1
(BJ386029) Dictyostelium discoideum cDNA clone:ddc56n20, 3' ... 159 8e-44 3
(BJ371168) Dictyostelium discoideum cDNA clone:ddc56n20, 5' ... 123 4e-39 2
(BJ359736) Dictyostelium discoideum cDNA clone:ddc2a10, 5' e... 119 1e-26 3
(BJ370002) Dictyostelium discoideum cDNA clone:ddc52f20, 5' ... 117 5e-26 3
(BJ362121) Dictyostelium discoideum cDNA clone:ddc20i12, 5' ... 129 6e-25 2
(BJ360383) Dictyostelium discoideum cDNA clone:ddc5h22, 5' e... 129 1e-24 1
(BJ371005) Dictyostelium discoideum cDNA clone:ddc56e10, 5' ... 68 6e-20 4
(BJ406756) Dictyostelium discoideum cDNA clone:dds36h07, 3' ... 62 3e-19 6
(BJ401781) Dictyostelium discoideum cDNA clone:dds19j12, 3' ... 62 3e-18 5
(BJ405544) Dictyostelium discoideum cDNA clone:dds32e04, 3' ... 62 4e-18 5
(BJ379874) Dictyostelium discoideum cDNA clone:ddc36d09, 3' ... 62 4e-18 5
(BJ407885) Dictyostelium discoideum cDNA clone:dds43p22, 3' ... 62 4e-18 5
(BJ350829) Dictyostelium discoideum cDNA clone:dda41l04, 3' ... 62 4e-18 5
(BJ442077) Dictyostelium discoideum cDNA clone:ddv48d20, 3' ... 62 4e-18 5
(BJ407141) Dictyostelium discoideum cDNA clone:dds37h17, 3' ... 62 4e-18 5
(BJ356590) Dictyostelium discoideum cDNA clone:dda60e21, 3' ... 62 4e-18 5
(BJ357289) Dictyostelium discoideum cDNA clone:dda63f04, 3' ... 62 4e-18 5
(BJ405007) Dictyostelium discoideum cDNA clone:dds30g08, 3' ... 62 4e-18 5
(BJ380014) Dictyostelium discoideum cDNA clone:ddc36p18, 3' ... 62 4e-18 5
(BJ405537) Dictyostelium discoideum cDNA clone:dds32d02, 3' ... 62 2e-17 5
(BJ348652) Dictyostelium discoideum cDNA clone:dda33l19, 3' ... 62 6e-17 4
(BJ393626) Dictyostelium discoideum cDNA clone:dds32d02, 5' ... 70 1e-16 5
(BJ395088) Dictyostelium discoideum cDNA clone:dds37h17, 5' ... 68 1e-16 3
(BJ403934) Dictyostelium discoideum cDNA clone:dds26c23, 3' ... 62 2e-16 4
(BJ405874) Dictyostelium discoideum cDNA clone:dds33h10, 3' ... 62 2e-16 4
(BJ392877) Dictyostelium discoideum cDNA clone:dds29c09, 5' ... 62 5e-16 5
(BJ439689) Dictyostelium discoideum cDNA clone:ddv41e08, 3' ... 58 3e-15 4
(BJ393973) Dictyostelium discoideum cDNA clone:dds33h10, 5' ... 68 3e-15 4
(BJ394332) Dictyostelium discoideum cDNA clone:dds34p13, 5' ... 70 4e-15 5
(BJ338790) Dictyostelium discoideum cDNA clone:dda63f04, 5' ... 70 5e-15 5
(BJ371492) Dictyostelium discoideum cDNA clone:ddc58b10, 5' ... 66 7e-15 5
(BJ404198) Dictyostelium discoideum cDNA clone:dds27p17, 3' ... 56 1e-14 4
(BJ391719) Dictyostelium discoideum cDNA clone:dds24n20, 5' ... 70 1e-14 5
(BJ348421) Dictyostelium discoideum cDNA clone:dda33m06, 3' ... 52 4e-14 4
(BJ366787) Dictyostelium discoideum cDNA clone:ddc40b11, 5' ... 60 7e-14 5
(BJ338256) Dictyostelium discoideum cDNA clone:dda60n16, 5' ... 60 8e-14 5
(BJ427627) Dictyostelium discoideum cDNA clone:ddv63e01, 5' ... 68 3e-13 3
(BJ420357) Dictyostelium discoideum cDNA clone:ddv39e02, 5' ... 68 3e-13 3
(BJ424942) Dictyostelium discoideum cDNA clone:ddv54j01, 5' ... 68 3e-13 3
(BJ423313) Dictyostelium discoideum cDNA clone:ddv48d20, 5' ... 68 3e-13 3
(BJ393633) Dictyostelium discoideum cDNA clone:dds32e04, 5' ... 68 3e-13 3
(BJ420976) Dictyostelium discoideum cDNA clone:ddv41e08, 5' ... 68 3e-13 3
(BJ393157) Dictyostelium discoideum cDNA clone:dds30g08, 5' ... 68 3e-13 3
(BJ365823) Dictyostelium discoideum cDNA clone:ddc36p18, 5' ... 70 3e-13 4
(BJ364705) Dictyostelium discoideum cDNA clone:ddc32l15, 5' ... 70 4e-13 4
(BJ395647) Dictyostelium discoideum cDNA clone:dds39k18, 5' ... 70 4e-13 4
(BJ338295) Dictyostelium discoideum cDNA clone:dda60f21, 5' ... 70 1e-12 4
(BJ336406) Dictyostelium discoideum cDNA clone:dda53f19, 5' ... 70 1e-12 4
(BJ392456) Dictyostelium discoideum cDNA clone:dds27p17, 5' ... 70 2e-12 4
(BJ392901) Dictyostelium discoideum cDNA clone:dds29i10, 5' ... 70 2e-12 4
(BJ396789) Dictyostelium discoideum cDNA clone:dds43p22, 5' ... 70 2e-12 4
(BJ394535) Dictyostelium discoideum cDNA clone:dds35e16, 5' ... 70 2e-12 4
(BJ394747) Dictyostelium discoideum cDNA clone:dds36h07, 5' ... 70 3e-12 4
(BJ339403) Dictyostelium discoideum cDNA clone:dda65p03, 5' ... 60 8e-12 5
(BJ440072) Dictyostelium discoideum cDNA clone:ddv42e17, 3' ... 46 2e-11 4
(BJ338529) Dictyostelium discoideum cDNA clone:dda61k20, 5' ... 70 3e-11 3
(BJ355543) Dictyostelium discoideum cDNA clone:dda57n10, 3' ... 48 9e-11 4
(BJ365695) Dictyostelium discoideum cDNA clone:ddc36d09, 5' ... 70 1e-08 3
(BJ337237) Dictyostelium discoideum cDNA clone:dda56a23, 5' ... 70 1e-08 3

>(BJ395126) Dictyostelium discoideum cDNA clone:dds37a20, 5' end,
single read.
Length = 628

Score = 1245 bits (628), Expect = 0.0
Identities = 628/628 (100%)
Strand = Plus / Plus


Query: 1508 cggtccattctatcgtgttgaacaattaattttaataccaaaacaaaagaatttatcaac 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cggtccattctatcgtgttgaacaattaattttaataccaaaacaaaagaatttatcaac 60


Query: 1568 gattttcaattatgatttatttaaatcattaattgatatagagacacaactaatgaagaa 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gattttcaattatgatttatttaaatcattaattgatatagagacacaactaatgaagaa 120


Query: 1628 tacaagtgtaaagcttaatgatggttcaaataggattataacattggatcaattatgttt 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacaagtgtaaagcttaatgatggttcaaataggattataacattggatcaattatgttt 180


Query: 1688 tgaacctactaaacgtggttgtttggttgagagtataacaggtatttttcaacgtgatca 1747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaacctactaaacgtggttgtttggttgagagtataacaggtatttttcaacgtgatca 240


Query: 1748 aaataaattaaatcaacaaaaggataatgtaattggttggtttgaacaatgtaaatcaca 1807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaataaattaaatcaacaaaaggataatgtaattggttggtttgaacaatgtaaatcaca 300


Query: 1808 attactttcaccagaatgtatggattcaactggtgtacctgtaaatccaaagatagtatt 1867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attactttcaccagaatgtatggattcaactggtgtacctgtaaatccaaagatagtatt 360


Query: 1868 gggtggttggaatgataattcaacgttggcaaaagcatttgtcaccactttcctattgaa 1927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gggtggttggaatgataattcaacgttggcaaaagcatttgtcaccactttcctattgaa 420


Query: 1928 taatccagattcaatgattgatagatcaatgatgtgggaacaagtttggttaaataaaat 1987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taatccagattcaatgattgatagatcaatgatgtgggaacaagtttggttaaataaaat 480


Query: 1988 tcaagagatttcaaatgatccttcatgtccattcgaaatatcattcaatgctcaaagatc 2047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcaagagatttcaaatgatccttcatgtccattcgaaatatcattcaatgctcaaagatc 540


Query: 2048 agtacaagatgaattggcaagagaaggtaatgcagatataccaacgattatcgttagtta 2107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agtacaagatgaattggcaagagaaggtaatgcagatataccaacgattatcgttagtta 600


Query: 2108 tttcgttatgtttttatatatctccctt 2135
||||||||||||||||||||||||||||
Sbjct: 601 tttcgttatgtttttatatatctccctt 628

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 4,674,692,867
Number of extensions: 281499247
Number of successful extensions: 23445451
Number of sequences better than 10.0: 276
Length of query: 4364
Length of database: 95,242,211,685
Length adjustment: 25
Effective length of query: 4339
Effective length of database: 97,216,030,006
Effective search space: 421820354196034
Effective search space used: 421820354196034
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 6.30
Homology vs Protein
Query= Contig-U11697-1 (Contig-U11697-1Q) /CSM_Contig/Contig-U11697-1Q.Seq.d
(4364 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AF202725_1(AF202725|pid:none) Dictyostelium discoideum NPC1 prot... 783 0.0
AC025815_1(AC025815|pid:none) Arabidopsis thaliana chromosome 1 ... 172 5e-71
AE014134_1855(AE014134|pid:none) Drosophila melanogaster chromos... 201 2e-65
AF182744_1(AF182744|pid:none) Cricetulus griseus Niemann-Pick ty... 209 3e-65
BT009977_1(BT009977|pid:none) Drosophila melanogaster RE56428 fu... 201 7e-65
AL606694_11(AL606694|pid:none) Oryza sativa genomic DNA, chromos... 203 1e-64
BC151276_1(BC151276|pid:none) Bos taurus Niemann-Pick disease, t... 216 2e-64
AF299073_1(AF299073|pid:none) Bos taurus Niemann-Pick type C1 di... 211 2e-64
AB209048_1(AB209048|pid:none) Homo sapiens mRNA for Niemann-Pick... 204 2e-63
BC063302_1(BC063302|pid:none) Homo sapiens Niemann-Pick disease,... 204 2e-63
AK293779_1(AK293779|pid:none) Homo sapiens cDNA FLJ51802 complet... 164 2e-63
AM475051_1(AM475051|pid:none) Vitis vinifera contig VV78X161773.... 155 3e-63
(P56941) RecName: Full=Niemann-Pick C1 protein; Flags: Precursor... 210 4e-63
AF503634_1(AF503634|pid:none) Felis catus Niemann-Pick C1 mRNA, ... 208 9e-62
AF258783_1(AF258783|pid:none) Felis catus Niemann-Pick type C1 d... 208 9e-62
AY437865_1(AY437865|pid:none) Homo sapiens Niemann-Pick C1-like ... 189 6e-57
AE017345_256(AE017345|pid:none) Cryptococcus neoformans var. neo... 150 3e-56
(Q6T3U4) RecName: Full=Niemann-Pick C1-like protein 1; Flags: Pr... 201 7e-55
BC131788_1(BC131788|pid:none) Mus musculus NPC1-like 1, mRNA (cD... 202 7e-55
AE014298_3182(AE014298|pid:none) Drosophila melanogaster chromos... 216 7e-55
AM270237_2(AM270237|pid:none) Aspergillus niger contig An11c0200... 218 2e-54
AM920435_1530(AM920435|pid:none) Penicillium chrysogenum Wiscons... 218 2e-54
(Q6T3U3) RecName: Full=Niemann-Pick C1-like protein 1; Flags: Pr... 198 6e-54
CS723370_1(CS723370|pid:none) Sequence 1 from Patent WO200710080... 186 6e-54
AY667365_1(AY667365|pid:none) Ciona intestinalis isolate west co... 155 4e-53
AY667352_1(AY667352|pid:none) Ciona intestinalis isolate west co... 155 4e-53
AY667348_1(AY667348|pid:none) Ciona intestinalis isolate west co... 154 1e-52
CR382136_201(CR382136|pid:none) Debaryomyces hansenii strain CBS... 192 1e-51
(Q12200) RecName: Full=Niemann-Pick type C-related protein 1; Fl... 149 2e-51
CR382129_773(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 160 3e-51
AK154282_1(AK154282|pid:none) Mus musculus NOD-derived CD11c +ve... 207 4e-51
CR380958_385(CR380958|pid:none) Candida glabrata strain CBS138 c... 145 7e-50
FN357386_11(FN357386|pid:none) Schistosoma mansoni genome sequen... 167 2e-48
FN392319_472(FN392319|pid:none) Pichia pastoris GS115 chromosome... 195 1e-47
BC143756_1(BC143756|pid:none) Homo sapiens NPC1 (Niemann-Pick di... 189 8e-46
FM992688_1311(FM992688|pid:none) Candida dubliniensis CD36 chrom... 189 1e-45
AC007534_1(AC007534|pid:none) Genomic sequence for Arabidopsis t... 149 4e-42
AL035539_12(AL035539|pid:none) Arabidopsis thaliana DNA chromoso... 177 4e-42
T15961(T15961)hypothetical protein F02E8.6 - Caenorhabditis eleg... 114 9e-38
(Q19127) RecName: Full=Niemann-Pick C1 protein homolog 1; Flags:... 114 9e-38
AF192523_1(AF192523|pid:none) Homo sapiens truncated Niemann-Pic... 151 2e-34
(P34389) RecName: Full=Niemann-Pick C1 protein homolog 2; Flags:... 102 7e-34
AE016820_361(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 144 3e-32
EU886296_1(EU886296|pid:none) Monodelphis domestica Niemann-Pick... 136 6e-30
BX005238_10(BX005238|pid:none) Zebrafish DNA sequence from clone... 110 9e-24
AB210579_1(AB210579|pid:none) Ciona intestinalis mRNA for Nieman... 80 9e-24
AL935186_7(AL935186|pid:none) Zebrafish DNA sequence from clone ... 109 2e-23
DQ885491_1(DQ885491|pid:none) Arabidopsis halleri subsp. halleri... 109 1e-21
AE013599_144(AE013599|pid:none) Drosophila melanogaster chromoso... 105 1e-20
(O35595) RecName: Full=Protein patched homolog 2; Short... 104 3e-20
CR382329_1(CR382329|pid:none) Zebrafish DNA sequence from clone ... 103 7e-20
CP001333_215(CP001333|pid:none) Micromonas sp. RCC299 chromosome... 102 1e-19
(Q09614) RecName: Full=Protein patched homolog 1; &Z46812_1(Z46... 102 1e-19
T27969(T27969)hypothetical protein ZK675.1 - Caenorhabditis eleg... 102 1e-19
(Q9Y6C5) RecName: Full=Protein patched homolog 2; Short... 102 1e-19
AY358555_1(AY358555|pid:none) Homo sapiens clone DNA35621 Patche... 102 1e-19
AF087651_1(AF087651|pid:none) Homo sapiens patched 2 (PTCH2) mRN... 102 1e-19
AB037686_1(AB037686|pid:none) Xenopus laevis Xptch-1 mRNA for pa... 101 2e-19
AF302765_1(AF302765|pid:none) Xenopus laevis patched-1 (Ptc1) mR... 101 2e-19
AB188226_1(AB188226|pid:none) Meriones unguiculatus ptc mRNA for... 101 3e-19
EF442429_1(EF442429|pid:none) Apis mellifera scutellata patched-... 100 4e-19
(Q61115) RecName: Full=Protein patched homolog 1; Short... 100 4e-19
AY357891_1(AY357891|pid:none) Rattus norvegicus patched mRNA, co... 100 4e-19
(Q90693) RecName: Full=Protein patched homolog 1; Short... 99 1e-18
U59464_1(U59464|pid:none) Human PATCHED protein (PTC) mRNA, comp... 99 2e-18
(Q13635) RecName: Full=Protein patched homolog 1; Short... 99 2e-18
(Q0EEE2) RecName: Full=Patched domain-containing protein 3; AltN... 98 2e-18
DQ885512_1(DQ885512|pid:none) Arabidopsis lyrata subsp. petraea ... 98 3e-18
AM055942_157(AM055942|pid:none) Toxoplasma gondii RH, genomic DN... 97 7e-18
AL021482_3(AL021482|pid:none) Caenorhabditis elegans YAC Y39A1B,... 94 4e-17
CP001141_266(CP001141|pid:none) Phaeodactylum tricornutum CCAP 1... 93 8e-17
AB210626_1(AB210626|pid:none) Ciona intestinalis mRNA for patche... 92 2e-16
AY810857_1(AY810857|pid:none) Schistosoma japonicum SJCHGC04467 ... 84 2e-16
AC024746_5(AC024746|pid:none) Caenorhabditis elegans cosmid Y110... 91 4e-16
CP001575_510(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 87 5e-15
U80447_8(U80447|pid:none) Caenorhabditis elegans cosmid F55F8, c... 87 7e-15
U28733_1(U28733|pid:none) Caenorhabditis elegans cosmid C54A12, ... 86 9e-15
T25600(T25600) hypothetical protein C32E8.8 - Caenorhabditis ele... 86 2e-14
Z69884_8(Z69884|pid:none) Caenorhabditis elegans Cosmid F31F6, c... 86 2e-14
CR954216_208(CR954216|pid:none) Ostreococcus tauri strain OTTH05... 85 2e-14
AF117898_1(AF117898|pid:none) Junonia coenia putative hedgehog r... 80 7e-13
T21612(T21612)hypothetical protein F31F6.5 - Caenorhabditis eleg... 79 2e-12
BC090541_1(BC090541|pid:none) Danio rerio Niemann-Pick disease, ... 78 3e-12
CP000600_299(CP000600|pid:none) Ostreococcus lucimarinus CCE9901... 77 6e-12
T16126(T16126)hypothetical protein F21H12.4 - Caenorhabditis ele... 74 5e-11
AB209495_1(AB209495|pid:none) Homo sapiens mRNA for patched vari... 70 9e-10
BC151166_1(BC151166|pid:none) Mus musculus similar to CG11212-PA... 69 2e-09
AK299301_1(AK299301|pid:none) Homo sapiens cDNA FLJ56419 complet... 69 2e-09
(Q6ZW05) RecName: Full=Patched domain-containing protein C6orf138; 69 2e-09
CP001329_475(CP001329|pid:none) Micromonas sp. RCC299 chromosome... 65 2e-08
S44797(S44797)F09G8.4 protein - Caenorhabditis elegans 64 6e-08
CP001576_388(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 63 8e-08
BT075948_1(BT075948|pid:none) Caligus rogercresseyi clone crog-e... 63 1e-07
(Q96NR3) RecName: Full=Patched domain-containing protein 1; 62 1e-07
BC121061_1(BC121061|pid:none) Homo sapiens patched domain contai... 62 1e-07
AK298796_1(AK298796|pid:none) Homo sapiens cDNA FLJ56413 complet... 62 1e-07
AX647477_1(AX647477|pid:none) Sequence 1669 from Patent EP1270724. 62 1e-07
BT081204_1(BT081204|pid:none) Caligus clemensi clone ccle-evs-51... 62 2e-07
(Q14B62) RecName: Full=Patched domain-containing protein 1; &BC... 61 3e-07
BX088539_3(BX088539|pid:none) Mouse DNA sequence from clone RP23... 61 3e-07
T28706(T28706)hypothetical protein C41D7.2 - Caenorhabditis eleg... 60 5e-07
AK036111_1(AK036111|pid:none) Mus musculus 16 days neonate cereb... 60 7e-07
AF409095_1(AF409095|pid:none) Gallus gallus patched 2 (PTC2) mRN... 60 7e-07
AL032639_3(AL032639|pid:none) Caenorhabditis elegans YAC Y38F1A,... 59 1e-06
CP001205_241(CP001205|pid:none) Borrelia burgdorferi ZS7, comple... 59 1e-06
CP000588_126(CP000588|pid:none) Ostreococcus lucimarinus CCE9901... 59 2e-06
AL031745_66(AL031745|pid:none) Plasmodium falciparum DNA from MA... 59 2e-06
CP000395_254(CP000395|pid:none) Borrelia afzelii PKo, complete g... 57 6e-06
AL132949_35(AL132949|pid:none) Caenorhabditis elegans YAC Y53F4B... 57 8e-06
CR954208_135(CR954208|pid:none) Ostreococcus tauri strain OTTH05... 55 2e-05
AL034393_10(AL034393|pid:none) Caenorhabditis elegans YAC Y18D10... 55 2e-05
EF100663_1(EF100663|pid:none) Leucoraja erinacea patched 2 (Ptc2... 55 2e-05
EU814484_1(EU814484|pid:none) Scyliorhinus canicula patched 2 (p... 55 2e-05
CP000013_249(CP000013|pid:none) Borrelia garinii PBi, complete g... 55 2e-05
CP001098_839(CP001098|pid:none) Halothermothrix orenii H 168, co... 55 2e-05
AF043697_2(AF043697|pid:none) Caenorhabditis elegans cosmid F56C... 54 5e-05
Z47074_2(Z47074|pid:none) Caenorhabditis elegans Cosmid K07C10, ... 54 5e-05
T23399(T23399)hypothetical protein K07C10.1 - Caenorhabditis ele... 54 5e-05
CR954210_48(CR954210|pid:none) Ostreococcus tauri strain OTTH059... 52 1e-04
BC163557_1(BC163557|pid:none) Danio rerio dispatched homolog 1 (... 52 2e-04
BC100040_1(BC100040|pid:none) Danio rerio dispatched homolog 1 (... 52 2e-04
(Q6R5J2) RecName: Full=Protein dispatched homolog 1; AltName: Fu... 52 2e-04
AY395768_1(AY395768|pid:none) Homo sapiens patched gene, exon 18... 52 3e-04
EU429800_1(EU429800|pid:none) Gallus gallus Disp3 (DISP3) mRNA, ... 51 3e-04
AY144589_1(AY144589|pid:none) Mus musculus DISP1 mRNA, partial c... 51 3e-04
AK138276_1(AK138276|pid:none) Mus musculus adult male hypothalam... 51 3e-04
(Q3TDN0) RecName: Full=Protein dispatched homolog 1; AltName: Fu... 51 3e-04
AC006618_3(AC006618|pid:none) Caenorhabditis elegans cosmid C45B... 51 3e-04
AY150577_1(AY150577|pid:none) Mus musculus dispatched (Disp) mRN... 51 3e-04
AY150698_1(AY150698|pid:none) Mus musculus dispatched A mRNA, co... 51 3e-04
AK170113_1(AK170113|pid:none) Mus musculus NOD-derived CD11c +ve... 51 3e-04
AY887138_1(AY887138|pid:none) Ambystoma mexicanum patched-1 (ptc... 50 0.001
AC006670_2(AC006670|pid:none) Caenorhabditis elegans cosmid K07A... 49 0.001
CR954209_126(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 49 0.001
AY395772_1(AY395772|pid:none) Homo sapiens patched gene, exon 23... 49 0.002
AK056569_1(AK056569|pid:none) Homo sapiens cDNA FLJ32007 fis, cl... 49 0.002
AL133092_1(AL133092|pid:none) Homo sapiens mRNA; cDNA DKFZp434I0... 49 0.002
BC011542_1(BC011542|pid:none) Homo sapiens dispatched homolog 1 ... 49 0.002
CP001326_556(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 49 0.002
EU480880_1(EU480880|pid:none) Caenorhabditis remanei strain PB20... 48 0.003
EU480881_1(EU480881|pid:none) Caenorhabditis remanei strain PB21... 48 0.003
CP000614_2685(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 47 0.005
AB384180_1(AB384180|pid:none) Synthetic construct DNA, clone: pF... 47 0.005
(Q9P2K9) RecName: Full=Patched domain-containing protein 2; AltN... 47 0.005
CP001503_2813(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 47 0.005
CP000086_677(CP000086|pid:none) Burkholderia thailandensis E264 ... 47 0.008
AM747720_2816(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 47 0.008
CP000378_1983(CP000378|pid:none) Burkholderia cenocepacia AU 105... 47 0.008
CP000440_2645(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 47 0.008
AM747722_767(AM747722|pid:none) Burkholderia cenocepacia J2315 c... 46 0.011
CP000960_659(CP000960|pid:none) Burkholderia cenocepacia MC0-3 c... 46 0.011
BX294149_230(BX294149|pid:none) Rhodopirellula baltica SH 1 comp... 46 0.011
CP001053_533(CP001053|pid:none) Burkholderia phytofirmans PsJN c... 46 0.014
CP000993_237(CP000993|pid:none) Borrelia recurrentis A1, complet... 46 0.014
CP001365_2646(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 46 0.014
CP000976_246(CP000976|pid:none) Borrelia duttonii Ly, complete g... 46 0.014
CP000817_4187(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 45 0.018
CP000379_2176(CP000379|pid:none) Burkholderia cenocepacia AU 105... 45 0.018
CP001133_1015(CP001133|pid:none) Vibrio fischeri MJ11 chromosome... 45 0.018
CT573072_730(CT573072|pid:none) Kuenenia stuttgartiensis genome ... 45 0.018
CP000959_1358(CP000959|pid:none) Burkholderia cenocepacia MC0-3 ... 45 0.018
CP000151_2750(CP000151|pid:none) Burkholderia sp. 383 chromosome... 45 0.018
AY458646_10(AY458646|pid:none) Uncultured marine bacterium 578 c... 45 0.024
CP000150_84(CP000150|pid:none) Burkholderia sp. 383 chromosome 3... 45 0.024
AY325270_3(AY325270|pid:none) Burkholderia pseudomallei multidru... 45 0.031
CU207417_10(CU207417|pid:none) Mouse DNA sequence from clone DN-... 45 0.031
CP000271_2136(CP000271|pid:none) Burkholderia xenovorans LB400 c... 45 0.031
BX571965_823(BX571965|pid:none) Burkholderia pseudomallei strain... 45 0.031
(A3KFU9) RecName: Full=Patched domain-containing protein 2; AltN... 45 0.031
CP000472_3301(CP000472|pid:none) Shewanella piezotolerans WP3, c... 45 0.031
CP000302_2178(CP000302|pid:none) Shewanella denitrificans OS217,... 44 0.040
AP008229_2871(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M... 44 0.040
CP000774_714(CP000774|pid:none) Parvibaculum lavamentivorans DS-... 44 0.040
CP001108_1354(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 44 0.040
U88182_2(U88182|pid:none) Caenorhabditis elegans cosmid C53C11, ... 44 0.053
CP000301_1881(CP000301|pid:none) Rhodopseudomonas palustris BisB... 44 0.053
T22186(T22186) hypothetical protein F44F4.4 - Caenorhabditis ele... 44 0.053
CP000781_318(CP000781|pid:none) Xanthobacter autotrophicus Py2, ... 44 0.053
T25657(T25657)hypothetical protein C53C11.3 - Caenorhabditis ele... 44 0.053
AB235901_1(AB235901|pid:none) Mus musculus mRNA for RNDEu-2, com... 44 0.069
CR954247_359(CR954247|pid:none) Pseudoalteromonas haloplanktis s... 44 0.069
AM747721_2838(AM747721|pid:none) Burkholderia cenocepacia J2315 ... 44 0.069
AK173152_1(AK173152|pid:none) Mus musculus mRNA for mKIAA1337 pr... 44 0.069
CP001157_2782(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 44 0.069
AE017226_2685(AE017226|pid:none) Treponema denticola ATCC 35405,... 44 0.069
CP001392_931(CP001392|pid:none) Diaphorobacter sp. TPSY, complet... 44 0.069
CP001349_3978(CP001349|pid:none) Methylobacterium nodulans ORS 2... 44 0.069
CP000283_3314(CP000283|pid:none) Rhodopseudomonas palustris BisB... 43 0.090
CP000519_50(CP000519|pid:none) Mycobacterium sp. KMS plasmid pMK... 43 0.090
CP001074_3550(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 43 0.090
BA000032_471(BA000032|pid:none) Vibrio parahaemolyticus RIMD 221... 43 0.090
CP000615_493(CP000615|pid:none) Burkholderia vietnamiensis G4 ch... 43 0.090
CP000091_866(CP000091|pid:none) Ralstonia eutropha JMP134 chromo... 43 0.090
CP001504_316(CP001504|pid:none) Burkholderia glumae BGR1 chromos... 43 0.090
CP000048_242(CP000048|pid:none) Borrelia hermsii DAH, complete g... 43 0.12
AL646053_1114(AL646053|pid:none) Ralstonia solanacearum GMI1000 ... 43 0.12
CP000969_1501(CP000969|pid:none) Thermotoga sp. RQ2, complete ge... 43 0.12
CP000738_3359(CP000738|pid:none) Sinorhizobium medicae WSM419, c... 43 0.12
EU016666_2(EU016666|pid:none) Uncultured marine microorganism HF... 43 0.12
CP000859_610(CP000859|pid:none) Desulfococcus oleovorans Hxd3, c... 42 0.15
GM955849_1(GM955849|pid:none) Sequence 2803 from Patent WO200814... 42 0.15
CP001013_3691(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 42 0.15
CP001029_4094(CP001029|pid:none) Methylobacterium populi BJ001, ... 42 0.15
BX950851_3422(BX950851|pid:none) Erwinia carotovora subsp. atros... 42 0.15
CP000353_1241(CP000353|pid:none) Ralstonia metallidurans CH34 me... 42 0.15
CU234118_5850(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 42 0.20
BX640447_98(BX640447|pid:none) Bordetella bronchiseptica strain ... 42 0.20
AP009384_2667(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 42 0.20
T21213(T21213;T27817) hypothetical protein ZK270.1 - Caenorhabdi... 42 0.20
CP001133_1234(CP001133|pid:none) Vibrio fischeri MJ11 chromosome... 42 0.20
CP001510_4446(CP001510|pid:none) Methylobacterium extorquens AM1... 42 0.20
GM955871_1(GM955871|pid:none) Sequence 2825 from Patent WO200814... 42 0.20
CP000943_1278(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 42 0.20
CP000863_2505(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 42 0.26
CP000152_22(CP000152|pid:none) Burkholderia sp. 383 chromosome 2... 42 0.26
CP000302_1715(CP000302|pid:none) Shewanella denitrificans OS217,... 42 0.26
AP009386_1949(AP009386|pid:none) Burkholderia multivorans ATCC 1... 42 0.26
CU468230_1388(CU468230|pid:none) Acinetobacter baumannii str. SD... 42 0.26
AP008230_2068(AP008230|pid:none) Desulfitobacterium hafniense Y5... 42 0.26
CP000503_4016(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 41 0.34
CP000628_2685(CP000628|pid:none) Agrobacterium radiobacter K84 c... 41 0.34
AE009439_1008(AE009439|pid:none) Methanopyrus kandleri AV19, com... 41 0.34
AY596294_57(AY596294|pid:none) Haloarcula marismortui ATCC 43049... 41 0.34
AM260479_1730(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 41 0.34
CP001172_1102(CP001172|pid:none) Acinetobacter baumannii AB307-0... 41 0.45
CP000379_30(CP000379|pid:none) Burkholderia cenocepacia AU 1054 ... 41 0.45
CP000679_228(CP000679|pid:none) Caldicellulosiruptor saccharolyt... 41 0.45
AM477086_1(AM477086|pid:none) Vitis vinifera contig VV78X109905.... 41 0.45
AP007255_1875(AP007255|pid:none) Magnetospirillum magneticum AMB... 41 0.45
(P18502) RecName: Full=Protein patched; AltName: Full=Hedgehog r... 41 0.45
CP001389_62(CP001389|pid:none) Rhizobium sp. NGR234, complete ge... 41 0.45
CP000153_1277(CP000153|pid:none) Sulfurimonas denitrificans DSM ... 40 0.58
AM167904_325(AM167904|pid:none) Bordetella avium 197N complete g... 40 0.58
CP000152_295(CP000152|pid:none) Burkholderia sp. 383 chromosome ... 40 0.58
FM954973_1116(FM954973|pid:none) Vibrio splendidus LGP32 chromos... 40 0.58
CP000394_1270(CP000394|pid:none) Granulibacter bethesdensis CGDN... 40 0.58
AM286690_2471(AM286690|pid:none) Alcanivorax borkumensis SK2, co... 40 0.58
CP000230_882(CP000230|pid:none) Rhodospirillum rubrum ATCC 11170... 40 0.58
CP000949_2924(CP000949|pid:none) Pseudomonas putida W619, comple... 40 0.58
CT573326_2127(CT573326|pid:none) Pseudomonas entomophila str. L4... 40 0.58
CP000447_2205(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 40 0.58
CP000103_1716(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 40 0.76
CP000884_5118(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 40 0.76
AE016796_499(AE016796|pid:none) Vibrio vulnificus CMCP6 chromoso... 40 0.76
CP000485_2028(CP000485|pid:none) Bacillus thuringiensis str. Al ... 40 0.76
BX640438_102(BX640438|pid:none) Bordetella bronchiseptica strain... 40 0.76
CP001185_1814(CP001185|pid:none) Thermosipho africanus TCF52B, c... 40 0.76
AL111168_25(AL111168|pid:none) Campylobacter jejuni subsp. jejun... 40 0.76
CP001186_2210(CP001186|pid:none) Bacillus cereus G9842, complete... 40 0.76
BA000045_4028(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 40 0.76
CP001407_2313(CP001407|pid:none) Bacillus cereus 03BB102, comple... 40 0.76
BX640424_108(BX640424|pid:none) Bordetella parapertussis strain ... 40 0.76
CT573213_412(CT573213|pid:none) Frankia alni str. ACN14A chromos... 40 0.76
CP000744_1613(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 40 0.76
CP000571_3249(CP000571|pid:none) Burkholderia pseudomallei 668 c... 40 0.99
AM746676_8263(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 40 0.99
CP000525_1095(CP000525|pid:none) Burkholderia mallei SAVP1 chrom... 40 0.99
CP000227_2230(CP000227|pid:none) Bacillus cereus Q1, complete ge... 40 0.99
AM236080_3777(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 40 0.99
CP000011_2002(CP000011|pid:none) Burkholderia mallei ATCC 23344 ... 40 0.99
CP000125_1477(CP000125|pid:none) Burkholderia pseudomallei 1710b... 40 0.99
AM902716_3273(AM902716|pid:none) Bordetella petrii strain DSM 12... 40 0.99
CP000916_1287(CP000916|pid:none) Thermotoga neapolitana DSM 4359... 39 1.3
CP000821_2423(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 39 1.3
AE017355_2144(AE017355|pid:none) Bacillus thuringiensis serovar ... 39 1.3
CP000473_4099(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 39 1.3
CP000884_4745(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 39 1.3
CP001103_1069(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 39 1.3
CP000926_2464(CP000926|pid:none) Pseudomonas putida GB-1, comple... 39 1.3
CP000076_3194(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 39 1.3
CP000702_1465(CP000702|pid:none) Thermotoga petrophila RKU-1, co... 39 1.3
CP000662_617(CP000662|pid:none) Rhodobacter sphaeroides ATCC 170... 39 1.3
CP000680_2165(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 39 1.3
AY524182_1(AY524182|pid:none) Ornithodoros moubata NPC1 precurso... 39 1.3
CP000958_1165(CP000958|pid:none) Burkholderia cenocepacia MC0-3 ... 39 1.7
AE016879_2212(AE016879|pid:none) Bacillus anthracis str. Ames, c... 39 1.7
CP000269_1565(CP000269|pid:none) Janthinobacterium sp. Marseille... 39 1.7
AE004091_2495(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 39 1.7
CP000613_3665(CP000613|pid:none) Rhodospirillum centenum SW, com... 39 1.7
CP000148_2787(CP000148|pid:none) Geobacter metallireducens GS-15... 39 1.7
CR378677_288(CR378677|pid:none) Photobacterium profundum SS9 chr... 39 1.7
CP000075_2967(CP000075|pid:none) Pseudomonas syringae pv. syring... 39 1.7
CP001053_2947(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 39 1.7
CP000085_2335(CP000085|pid:none) Burkholderia thailandensis E264... 39 1.7
CP001635_2526(CP001635|pid:none) Variovorax paradoxus S110 chrom... 39 1.7
CP000383_1481(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 39 2.2
AL111168_970(AL111168|pid:none) Campylobacter jejuni subsp. jeju... 39 2.2
CP000089_3797(CP000089|pid:none) Dechloromonas aromatica RCB, co... 39 2.2
CP001184_433(CP001184|pid:none) Ureaplasma urealyticum serovar 1... 39 2.2
BA000012_2531(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 39 2.2
AP008957_1084(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 39 2.2
CP000656_454(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, co... 39 2.2
CP000025_1138(CP000025|pid:none) Campylobacter jejuni RM1221, co... 39 2.2
CP000142_2230(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 39 2.2
AJ938182_2425(AJ938182|pid:none) Staphylococcus aureus RF122 com... 38 2.9
CP000253_2714(CP000253|pid:none) Staphylococcus aureus subsp. au... 38 2.9
CP001358_2114(CP001358|pid:none) Desulfovibrio desulfuricans sub... 38 2.9
CP000490_110(CP000490|pid:none) Paracoccus denitrificans PD1222 ... 38 2.9
CP000613_180(CP000613|pid:none) Rhodospirillum centenum SW, comp... 38 2.9
CP000255_2401(CP000255|pid:none) Staphylococcus aureus subsp. au... 38 2.9
AE017340_62(AE017340|pid:none) Idiomarina loihiensis L2TR, compl... 38 2.9
CP000703_2537(CP000703|pid:none) Staphylococcus aureus subsp. au... 38 3.8
AB219524_2(AB219524|pid:none) Pseudomonas aeruginosa MexPQ-OpmE ... 38 3.8
CP000025_23(CP000025|pid:none) Campylobacter jejuni RM1221, comp... 38 3.8
T20370(T20370;T22129)hypothetical protein F43D9.1 - Caenorhabdit... 38 3.8
CP000712_2275(CP000712|pid:none) Pseudomonas putida F1, complete... 38 3.8
CP000931_2883(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 38 3.8
AE004091_3522(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 38 3.8
CR378680_47(CR378680|pid:none) Photobacterium profundum SS9 chro... 38 3.8
FM242711_2395(FM242711|pid:none) Listeria monocytogenes Clip8145... 38 3.8
CU458896_4495(CU458896|pid:none) Mycobacterium abscessus chromos... 38 3.8
CP000271_2941(CP000271|pid:none) Burkholderia xenovorans LB400 c... 38 3.8
CP001176_1218(CP001176|pid:none) Bacillus cereus B4264, complete... 37 4.9
AM263198_2412(AM263198|pid:none) Listeria welshimeri serovar 6b ... 37 4.9
AG1382(AG1382) transport protein homolog lmo2463 [imported] - Li... 37 4.9
CP000075_2281(CP000075|pid:none) Pseudomonas syringae pv. syring... 37 4.9
CP001252_1159(CP001252|pid:none) Shewanella baltica OS223, compl... 37 4.9
CP000563_3125(CP000563|pid:none) Shewanella baltica OS155, compl... 37 4.9
CP001175_132(CP001175|pid:none) Listeria monocytogenes HCC23, co... 37 4.9
CP000884_5722(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 37 4.9
CP000109_1855(CP000109|pid:none) Thiomicrospira crunogena XCL-2,... 37 4.9
CP000378_712(CP000378|pid:none) Burkholderia cenocepacia AU 1054... 37 4.9
CP000438_1488(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 37 4.9
CP000753_3137(CP000753|pid:none) Shewanella baltica OS185, compl... 37 4.9
AE014299_3398(AE014299|pid:none) Shewanella oneidensis MR-1, com... 37 4.9
CP001053_2905(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 37 4.9
CP000092_364(CP000092|pid:none) Ralstonia eutropha JMP134 megapl... 37 4.9
CP000851_2797(CP000851|pid:none) Shewanella pealeana ATCC 700345... 37 4.9
EU016651_32(EU016651|pid:none) Uncultured marine microorganism H... 37 4.9
AE016853_2542(AE016853|pid:none) Pseudomonas syringae pv. tomato... 37 6.4
CR931997_148(CR931997|pid:none) Corynebacterium jeikeium K411 co... 37 6.4
CT573074_117(CT573074|pid:none) Kuenenia stuttgartiensis genome ... 37 6.4
AM181176_3142(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 37 6.4
AP006725_813(AP006725|pid:none) Klebsiella pneumoniae NTUH-K2044... 37 6.4
AM167904_2458(AM167904|pid:none) Bordetella avium 197N complete ... 37 6.4
AE017340_434(AE017340|pid:none) Idiomarina loihiensis L2TR, comp... 37 6.4
AF159510_2(AF159510|pid:none) Brevibacterium flavum carotenoid b... 37 6.4
CP001111_3605(CP001111|pid:none) Stenotrophomonas maltophilia R5... 37 6.4
CP000503_1211(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 37 6.4
CP000721_2820(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 37 6.4
CP001322_4232(CP001322|pid:none) Desulfatibacillum alkenivorans ... 37 6.4
AL592166_14(AL592166|pid:none) Human DNA sequence from clone RP1... 37 6.4
AY596297_2979(AY596297|pid:none) Haloarcula marismortui ATCC 430... 37 6.4
CP000388_4091(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 37 8.4
(Q7N3E2) RecName: Full=Multidrug resistance protein mdtB; AltNam... 37 8.4
CU695240_624(CU695240|pid:none) Ralstonia solanacearum strain Mo... 37 8.4
AM747720_1078(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 37 8.4

>AF202725_1(AF202725|pid:none) Dictyostelium discoideum NPC1 protein
mRNA, complete cds. &AF202726_1(AF202726|pid:none)
Length = 1342

Score = 783 bits (2023), Expect = 0.0
Identities = 406/866 (46%), Positives = 544/866 (62%), Gaps = 7/866 (0%)
Frame = +3

Query: 147 QSPYPYNTTLGCSMYGVSSSFVEAKDFPPLNNTEIAPNTCQLTHPEYSIESCCNYNQTLI 326
Q P+PYNTT GCSM G+++S++E+ +PP +N +AP TCQ +HPEYS SCC QTL+
Sbjct: 28 QGPFPYNTTEGCSMNGLNASYIESGLYPPYHNQILAPGTCQYSHPEYSETSCCTNGQTLV 87

Query: 327 LQTNMLVAGGIFGRCSSCMVNLYNLWCASSCSPYQKSFMVPTKVDNKTDQIISIDFVLHP 506
L +NM++ +F RC +C+ N+++LWCASSCSPYQ+SFMVPT +D+KT QI+S+DFV+HP
Sbjct: 88 LLSNMVMGSAVFARCPACLFNVWDLWCASSCSPYQQSFMVPTSIDSKTGQILSVDFVIHP 147

Query: 507 DFANGLYNSCRDVHANGAQPFGVMFPTAQLFFTGVFSAVNPTFKELNWVFNNEGYNDAIV 686
D+A GLYNSC V+++GA PFG +F T Q FF+G+F A+NP F +NWVFN GY
Sbjct: 148 DYAWGLYNSCSGVNSDGAPPFGTIFHTPQDFFSGIF-ALNPAFS-INWVFNETGYISPTA 205

Query: 687 PCSEGCSCDQCRDACLPPPSYKDIGLLNDTIIQTHLLI-EVPHLTXXXXXXXXXXXXXXX 863
PC+E CSCDQC DAC PPP+ +IGL N+++ QT+L E+P L+
Sbjct: 206 PCAESCSCDQCGDACGPPPTVGEIGLFNNSLPQTYLFNHEIPFLSVWMIWTFIMFTLVLT 265

Query: 864 XXXXXXXXXKYSSKIRYFXGKKFKTVMMIILGILFICTVLIPFVTTHQMIDGKTASCMWK 1043
+++F K K + ++L I FI +LIPF++ + +SC WK
Sbjct: 266 YGTSMGLVL--FGNVKFFDSTKVKVIASLVLSISFISAILIPFISGKVPLHD--SSCQWK 321

Query: 1044 LDDGKEWNCSFAMGVSIYIMITLLLLSIVILACIIVDKTASNXXXXXXXXXXXXXXXQQ- 1220
+ + WNCS A+GV IY +IT + L ++ + I++ SN
Sbjct: 322 MPSDQLWNCSLALGVGIYELITFIFLFVISIVIIVLYHIGSNNRPIPGSSSNASVVYDAL 381

Query: 1221 VXXXXXXXXXXXXXXXXXXXXXXXXIFQKVFYWYGINITKRPIIVLICCLLFTXXXXXXX 1400
+ I Q+ FYWYG + +P+IV++ C++ T
Sbjct: 382 ISSNSSNNDNSNSNNNEQQQQQPSTIIQRFFYWYGHKVASKPLIVILICIIITAGLGIGI 441

Query: 1401 XSLEIETDPVKLWVSPDSRSAIEKQYFDXHFGXXXXGPFYRVEQLILIPK-QKNLSTIFN 1577
LEIE DPVKLWV+PDSR+A++K YFD +FG PFYRVEQ+I+ PK Q T+
Sbjct: 442 IKLEIEQDPVKLWVAPDSRAALDKTYFDNNFG-----PFYRVEQIIITPKNQTKYPTVIE 496

Query: 1578 YDLFKSLIDIETQLMKNTSVKLNDGSNRIITLDQLCFEPTKRGCLVESITGIFQRDQNKL 1757
YDL L +IE LM + + +ITLD LCF+PTKRGCL+ES +G++QR+ +KL
Sbjct: 497 YDLLLELFEIELSLMSLEA----EYEGELITLDSLCFKPTKRGCLIESTSGLWQRNISKL 552

Query: 1758 N--QQKDNVIGWFEQCKSQLLSPECMDSTGVPVNPKIVLGGW-NDNSTLAKAFVTTFLLN 1928
N Q ++ V+ ++E C+S LL P+CMDS G PV P++VLGGW N+NS+ A AFV TFLLN
Sbjct: 553 NYTQSEEGVLTYYENCQSSLLQPDCMDSVGAPVQPRVVLGGWENNNSSAASAFVVTFLLN 612

Query: 1929 NPDSMIDRSMMWEQVWLNKIQEISNDPSCPFEISFNAQRSVQDELAREGNADIPTIIVSY 2108
NP M++ +M WEQVWL+ I I+ F+I+++A+RSVQDEL+REGNADIPTI++SY
Sbjct: 613 NPTDMVNTAMAWEQVWLDHISAIAATSEI-FDITYSAERSVQDELSREGNADIPTILISY 671

Query: 2109 FVMFLYISLSLGSYYXXXXXXXXXXXXXXXALGLXXXXXXXXXXXXXXXXXPILRIKATL 2288
FVMF Y+SLSLGSYY ALG + +KATL
Sbjct: 672 FVMFFYVSLSLGSYYPFPTRFLSLFVRSRFALGFCGIIIVAASIVISVGVCSMANLKATL 731

Query: 2289 IISEVIPFLVLAIGVDNIFILVNTFESLHVAXXXXXXXXXGFNQNHHQMPTPEESFARTL 2468
IISEVIPFLVLAIGVDNIFI+VNTFESLHV + +PT E+S ARTL
Sbjct: 732 IISEVIPFLVLAIGVDNIFIIVNTFESLHVVRYDP-------HTRAAILPTSEDSLARTL 784

Query: 2469 AKVGPXXXXXXXXXXXXXXXXXXTKMPAVKAFSFYASIAVFFDFLLQISAFACLLVLDTK 2648
AKVGP TKMPAV+AFS+YA++A+F DFLLQ+SAF+ LLVLD+K
Sbjct: 785 AKVGPSIALASLSESLAFLLGSLTKMPAVQAFSYYAALAIFVDFLLQVSAFSALLVLDSK 844

Query: 2649 RLQSRRVDCLPCLSL-NGDNSDLEDD 2723
R SRR+DCLPC++L +GDNSD+EDD
Sbjct: 845 RASSRRIDCLPCIALEDGDNSDMEDD 870

Score = 266 bits (681), Expect(3) = e-133
Identities = 130/201 (64%), Positives = 159/201 (79%)
Frame = +1

Query: 3685 TSYYLADHSDAQVFTYSIFYCYFEAYLTIKQVALKGILLALGSVFFVSLAILMNPLVSIL 3864
T+YYLAD+SD V YSI Y YF+ YLTIK VA+ ILLALG VF V L +L+NPLVS L
Sbjct: 1134 TAYYLADNSDLDVEVYSIIYVYFDQYLTIKSVAIMDILLALGGVFIVCLILLLNPLVSFL 1193

Query: 3865 VVLCVGMTVVDLLAVMTLWDIFLNAISVVNLIMAVGISIEFCVHIASTFIRSPKHYSRDE 4044
VV+ VGM VDLL +M LW+I LNA+SVVN++MA+GI IEFCVHIASTFI +PKH+SRD+
Sbjct: 1194 VVISVGMICVDLLGIMALWNISLNAVSVVNVVMAIGIGIEFCVHIASTFINAPKHFSRDQ 1253

Query: 4045 KVKFAISEMGANIFSGIFITKLLGCVVLAFSKSEIFIIYYFKMYISICLLAAVHGLVLLP 4224
K K+A++EMG++I SGIFITKLLG VVL FS SEIF +YYF+MY+SI L +HGLV LP
Sbjct: 1254 KAKYAVTEMGSSIISGIFITKLLGVVVLGFSTSEIFTVYYFRMYLSIVFLGGLHGLVFLP 1313

Query: 4225 VLLSIFGTNKFSFEKFLTFKK 4287
VLLS+FGT+ ++ KK
Sbjct: 1314 VLLSLFGTDTLQLDRLCKSKK 1334

Score = 167 bits (424), Expect(3) = e-133
Identities = 80/152 (52%), Positives = 107/152 (70%), Gaps = 2/152 (1%)
Frame = +3

Query: 3231 VVKGNYDFSIPSIQNQFCTVGGCNNNSVINTFDNAPFISPGISSWLDDMLRWSNTVG-CC 3407
V+KG+Y+++ QN+ CT+GGC+ +S++N F+NAPFI+ GISSWLDD + ++ G CC
Sbjct: 983 VIKGDYNYTDFESQNKLCTMGGCDKDSIVNVFNNAPFINKGISSWLDDYISFAQAQGSCC 1042

Query: 3408 TAFDNGTYC-NSDEPGCDQQCFPLEKSGRPDPSLFKKYLPAFLNFTNTDQCPLAGLAYTG 3584
+ NG+ C N +P C CF GRPDP F +YLP FLN +NT CPLAGLAYT
Sbjct: 1043 LKYPNGSICYNGADPSC-APCFSNNAQGRPDPQSFIQYLPFFLNVSNTASCPLAGLAYTS 1101

Query: 3585 DVKFNSDGSIAATRFDAYHTTLRTQNDFINAL 3680
D +G+I A+RFD YHTTLRTQ+D+INA+
Sbjct: 1102 DAHI-VNGTIVASRFDGYHTTLRTQDDYINAV 1132

Score = 90.1 bits (222), Expect(3) = e-133
Identities = 42/75 (56%), Positives = 50/75 (66%)
Frame = +2

Query: 3014 LFTKYYAPFLVHPISKXXXXXXXXXXXXXSINYAYQIPIGLDQKVALPRNSYLQAYFTNM 3193
+F K+YAPFL+HPI+K IN+A+Q+ IGLDQ+VALP NSYLQ YF NM
Sbjct: 911 VFKKFYAPFLLHPITKMLVIIFFVGLLLTGINFAFQVSIGLDQRVALPSNSYLQGYFNNM 970

Query: 3194 NQFLEVGPPMYICCK 3238
LEVGPP YI K
Sbjct: 971 ANLLEVGPPFYIVIK 985

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 5,945,238,143
Number of extensions: 113465314
Number of successful extensions: 287773
Number of sequences better than 10.0: 347
Number of HSP's gapped: 287036
Number of HSP's successfully gapped: 549
Length of query: 1454
Length of database: 1,051,180,864
Length adjustment: 142
Effective length of query: 1312
Effective length of database: 591,589,486
Effective search space: 776165405632
Effective search space used: 776165405632
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.91 gvh: 0.51 alm: 0.10 top: 1.00 tms: 0.60 mit: 0.34 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 1.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 1.00 m_ : 0.00

56.0 %: plasma membrane
16.0 %: endoplasmic reticulum
8.0 %: mitochondrial
8.0 %: vacuolar
4.0 %: Golgi
4.0 %: cytoplasmic
4.0 %: nuclear

>> prediction for Contig-U11697-1 is pla

VS (DIR, S) 0
VH (FL, L) 1
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 1
SL (DIR, L) 1
SS (DIR, S) 2
SH (FL, L) 5
SF (FL, S) 0
CH (FL, L) 9
CF (FL, S) 2
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0