Contig-U11670-1
Contig ID Contig-U11670-1
Contig update 2002.12.18
Contig sequence
>Contig-U11670-1 (Contig-U11670-1Q) /CSM_Contig/Contig-U11670-1Q.Seq.d
ATATATACAATTTTATGTAAAAATAATTAAATAATGAAAAATGAACCATT
ATCCAGGTGAGAAAACAATTAAATCAGGTAATTTATATAAAAAAGGTAAA
ATTAATAAAAGTTGGCAAAAAAGATGGTGTATGTTATCAAAAGATAGTAA
ATTATTTTATCATAAACAAGCCAATGAAAAACATAGTGGATTCGTTGATC
TAAGACAATGTATAATAAAACAAAGTGATTGTACAGAAAAAGAGAATATA
TTTGAAATTAATACAAGTAATAGAATATATTTATTCTCTGCCGATTCAAA
ATCAGAGATGGAAGATTGGATGAGAAGTATTTACACTCATTCAAAAGTTC
AACAAGAGAATGACCTAATTGAACGTGCAGAATACATCATAAGGGATCAA
TCATTATTTAAATCAAATTACGTTGATGATGAATTTTTAAAATTTAAAAA
TACTTTTAATCCATATATATTTCAATCATTATCATTATCAACTTTATCAC
CTGATGATTTAAATAATCAACACCAACATCAACATCAACACCAACATCAA
CACCAACACCAACATCAACATCATCAAAATGATTTTAATATAAATTCAAA
TTTACCAAGTTCATTATTGTCA----------NNNNNNNNNNTACAAGNA
ATTTATATNNTCATTTTCACTCGATTGGTAATCATGNATATAATCNTGGN
NGATGGATTTAATAATACATTCATCTTCNCCAACTCCACGNATTCCTCCG
AGTAATACTAATAATAATAATAATAANNCCNATATAGTACCATCACCACC
CACACCCTCATCACCACCGATTGGTTCTTTAACAACAACAACAACAACAA
CAACAGCTACAACAACGACAACTACCACTACCACTACCACTACAACAACG
GCAAACAATAGTAATATTAAAGAGACTGATAAAGCTTCNCCAAGTAGCAA
GATTCAGTTTACTATTTAAAT

Gap gap included
Contig length 961
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 1938832
End point 1937881
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 3
Link to clone list U11670
List of clone(s)

est1=CHC659F,1,619
est2=AHC704F,56,622
est3=CHC659Z,623,952
Translated Amino Acid sequence
yiqfyvkiik**KMNHYPGEKTIKSGNLYKKGKINKSWQKRWCMLSKDSKLFYHKQANEK
HSGFVDLRQCIIKQSDCTEKENIFEINTSNRIYLFSADSKSEMEDWMRSIYTHSKVQQEN
DLIERAEYIIRDQSLFKSNYVDDEFLKFKNTFNPYIFQSLSLSTLSPDDLNNQHQHQHQH
QHQHQHQHQHHQNDFNINSNLPSSLLS---

---XXXXQXIYXXIFTRLVIMXIIXXDGFNNTFIFXNSTXSSE*y******xxystitth
tlittdwffnnnnnnnnsynndnyhyhyhynngkq**y*rd**sfxk*qdsvyyln


Translated Amino Acid sequence (All Frames)
Frame A:
iytilcknn*imkneplsr*enn*ir*fi*kr*n**klakkmvyvikr**iils*tsq*k
t*wir*sktmynktk*lyrkreyi*n*yk**nifilcrfkirdgrldekylhsfksstre
*pn*tcrihhkgsiii*iklr***ifki*kyf*siyisiiiiinfit**fk*stptstst
ptstptptstssk*f*ykfkftkfiiv---

---XXXXQXIYXXIFTRLVIMXIIXXDGFNNTFIFXNSTXSSE*y******xxystitth
tlittdwffnnnnnnnnsynndnyhyhyhynngkq**y*rd**sfxk*qdsvyyln

Frame B:
yiqfyvkiik**KMNHYPGEKTIKSGNLYKKGKINKSWQKRWCMLSKDSKLFYHKQANEK
HSGFVDLRQCIIKQSDCTEKENIFEINTSNRIYLFSADSKSEMEDWMRSIYTHSKVQQEN
DLIERAEYIIRDQSLFKSNYVDDEFLKFKNTFNPYIFQSLSLSTLSPDDLNNQHQHQHQH
QHQHQHQHQHHQNDFNINSNLPSSLLS---

---xxxykxfixsfsldw*sxi*swxmdliihsssptprippsntnnnnnxxxivpsppt
pssppigslttttttttattttttttttttttannsniketdkaspsskiqfti*

Frame C:
iynfm*k*lnnek*tiiqvrkqlnqviyikkvklikvgkkdgvcyqkivnyfiinkpmkn
ivdsli*dnv**nkvivqkkriylkliqvieyiyslpiqnqrwkig*evftliqkfnkrm
t*lnvqnts*ginhylnqitlmmnf*nlkillihiyfnhyhyqlyhlmi*iintninint
nintntniniikmili*iqiyqvhyc---

---xxxtxnlyxhfhsignhxynxgxwi**yihlxqlhxflrviliiiiixpi*yhhhph
phhhrlvl*qqqqqqqqlqqrqlplplplqqrqtivilkrliklxqvarfsllfk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11670-1 (Contig-U11670-1Q)
/CSM_Contig/Contig-U11670-1Q.Seq.d
(971 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11670-1 (Contig-U11670-1Q) /CSM_Contig/Conti... 777 0.0
Contig-U02757-1 (Contig-U02757-1Q) /CSM_Contig/Conti... 48 2e-05
Contig-U14566-1 (Contig-U14566-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U13351-1 (Contig-U13351-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U12561-1 (Contig-U12561-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U12001-1 (Contig-U12001-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U11970-1 (Contig-U11970-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U09546-1 (Contig-U09546-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U08227-1 (Contig-U08227-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U05175-1 (Contig-U05175-1Q) /CSM_Contig/Conti... 42 0.001

>Contig-U11670-1 (Contig-U11670-1Q) /CSM_Contig/Contig-U11670-1Q.Seq.d
Length = 971

Score = 777 bits (392), Expect = 0.0
Identities = 392/392 (100%)
Strand = Plus / Plus


Query: 123 gatggtgtatgttatcaaaagatagtaaattattttatcataaacaagccaatgaaaaac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gatggtgtatgttatcaaaagatagtaaattattttatcataaacaagccaatgaaaaac 182


Query: 183 atagtggattcgttgatctaagacaatgtataataaaacaaagtgattgtacagaaaaag 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 atagtggattcgttgatctaagacaatgtataataaaacaaagtgattgtacagaaaaag 242


Query: 243 agaatatatttgaaattaatacaagtaatagaatatatttattctctgccgattcaaaat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 agaatatatttgaaattaatacaagtaatagaatatatttattctctgccgattcaaaat 302


Query: 303 cagagatggaagattggatgagaagtatttacactcattcaaaagttcaacaagagaatg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 cagagatggaagattggatgagaagtatttacactcattcaaaagttcaacaagagaatg 362


Query: 363 acctaattgaacgtgcagaatacatcataagggatcaatcattatttaaatcaaattacg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 acctaattgaacgtgcagaatacatcataagggatcaatcattatttaaatcaaattacg 422


Query: 423 ttgatgatgaatttttaaaatttaaaaatacttttaatccatatatatttcaatcattat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ttgatgatgaatttttaaaatttaaaaatacttttaatccatatatatttcaatcattat 482


Query: 483 cattatcaactttatcacctgatgatttaaat 514
||||||||||||||||||||||||||||||||
Sbjct: 483 cattatcaactttatcacctgatgatttaaat 514


Score = 190 bits (96), Expect = 2e-48
Identities = 99/99 (100%)
Strand = Plus / Plus


Query: 873 taccactaccactaccactacaacaacggcaaacaatagtaatattaaagagactgataa 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 taccactaccactaccactacaacaacggcaaacaatagtaatattaaagagactgataa 932


Query: 933 agcttcnccaagtagcaagattcagtttactatttaaat 971
|||||||||||||||||||||||||||||||||||||||
Sbjct: 933 agcttcnccaagtagcaagattcagtttactatttaaat 971


Score = 172 bits (87), Expect = 5e-43
Identities = 87/87 (100%)
Strand = Plus / Plus


Query: 1 atatatacaattttatgtaaaaataattaaataatgaaaaatgaaccattatccaggtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atatatacaattttatgtaaaaataattaaataatgaaaaatgaaccattatccaggtga 60


Query: 61 gaaaacaattaaatcaggtaatttata 87
|||||||||||||||||||||||||||
Sbjct: 61 gaaaacaattaaatcaggtaatttata 87


Score = 165 bits (83), Expect = 1e-40
Identities = 110/110 (100%)
Strand = Plus / Plus


Query: 643 tacaagnaatttatatnntcattttcactcgattggtaatcatgnatataatcntggnng 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 tacaagnaatttatatnntcattttcactcgattggtaatcatgnatataatcntggnng 702


Query: 703 atggatttaataatacattcatcttcnccaactccacgnattcctccgag 752
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 atggatttaataatacattcatcttcnccaactccacgnattcctccgag 752


Score = 97.6 bits (49), Expect = 2e-20
Identities = 49/49 (100%)
Strand = Plus / Plus


Query: 782 atatagtaccatcaccacccacaccctcatcaccaccgattggttcttt 830
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 atatagtaccatcaccacccacaccctcatcaccaccgattggttcttt 830


Score = 91.7 bits (46), Expect = 1e-18
Identities = 46/46 (100%)
Strand = Plus / Plus


Query: 577 aaatgattttaatataaattcaaatttaccaagttcattattgtca 622
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 aaatgattttaatataaattcaaatttaccaagttcattattgtca 622


>Contig-U02757-1 (Contig-U02757-1Q) /CSM_Contig/Contig-U02757-1Q.Seq.d
Length = 1232

Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus


Query: 873 taccactaccactaccactacaac 896
||||||||||||||||||||||||
Sbjct: 1085 taccactaccactaccactacaac 1108


Score = 32.2 bits (16), Expect = 1.1
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 874 accactaccactaccactac 893
|||| |||||||||||||||
Sbjct: 1080 accaataccactaccactac 1099


>Contig-U14566-1 (Contig-U14566-1Q) /CSM_Contig/Contig-U14566-1Q.Seq.d
Length = 501

Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus


Query: 873 taccactaccactaccactac 893
|||||||||||||||||||||
Sbjct: 443 taccactaccactaccactac 423


Score = 34.2 bits (17), Expect = 0.27
Identities = 17/17 (100%)
Strand = Plus / Minus


Query: 877 actaccactaccactac 893
|||||||||||||||||
Sbjct: 445 actaccactaccactac 429


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,935
Number of Sequences: 6905
Number of extensions: 18935
Number of successful extensions: 2822
Number of sequences better than 10.0: 439
length of query: 971
length of database: 5,674,871
effective HSP length: 16
effective length of query: 955
effective length of database: 5,564,391
effective search space: 5313993405
effective search space used: 5313993405
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.25
Homology vs DNA
Query= Contig-U11670-1 (Contig-U11670-1Q) /CSM_Contig/Contig-U11670-1Q.Seq.d
(971 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ363610) Dictyostelium discoideum cDNA clone:ddc27e16, 5' ... 722 0.0 3
(BJ331789) Dictyostelium discoideum cDNA clone:dda36h01, 5' ... 722 0.0 2
(BJ378151) Dictyostelium discoideum cDNA clone:ddc27e16, 3' ... 165 9e-87 3
(EL918813) NY4Th2_24_F11.b2_A039 NY4 theronts Ichthyophthiri... 48 5e-05 3
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 38 5e-04 9
(EL919240) NY4Th2_28_C07.g2_A039 NY4 theronts Ichthyophthiri... 48 6e-04 3
(EL925256) NY4Th2_153_G04.b1_A039 NY4 theronts Ichthyophthir... 48 6e-04 3
(AE014827) Plasmodium falciparum 3D7 chromosome 14 section 1... 38 0.001 10
(AC097218) Rattus norvegicus clone CH230-202J6, *** SEQUENCI... 44 0.007 2
(AC128620) Rattus norvegicus clone CH230-297H24, WORKING DRA... 44 0.007 2
(EL919087) NY4Th2_27_E09.b2_A039 NY4 theronts Ichthyophthiri... 48 0.016 2
(AM446873) Vitis vinifera contig VV79X005170.2, whole genome... 40 0.027 2
(CT538478) A BAC library has been constructed from cultivar ... 40 0.033 2
(AC138958) Homo sapiens chromosome 5 clone RP11-869E2, WORKI... 44 0.075 7
(AC184040) Spermophilus tridecemlineatus clone VMRC20-719B8,... 36 0.095 2
(AC004153) Plasmodium falciparum chromosome 12 clone 3D7, **... 34 0.10 9
(FF313456) 279390586 Pea aphid whole body normalized full le... 38 0.12 2
(CU302202) Zebrafish DNA sequence from clone DKEY-156M2 in l... 50 0.16 1
(BC161189) Xenopus tropicalis cDNA clone MGC:185468 IMAGE:78... 50 0.16 1
(AM482668) Vitis vinifera contig VV78X223565.2, whole genome... 50 0.16 1
(EJ553063) 1092959470222 Global-Ocean-Sampling_GS-29-01-01-1... 50 0.16 1
(EI910332) VUH2-32M14TV VUUBBa (VUH2) Vigna unguiculata geno... 50 0.16 1
(EI910200) VUH2-32C23TV VUUBBa (VUH2) Vigna unguiculata geno... 50 0.16 1
(ES968250) BNZB_UP_201_E01_14MAR2006_007 Brassica napus BNZB... 50 0.16 1
(DT444247) JGI_CABK5274.rev NIH_XGC_tropSpl1 Xenopus (Silura... 50 0.16 1
(DT443923) JGI_CABK5100.rev NIH_XGC_tropSpl1 Xenopus (Silura... 50 0.16 1
(DT423721) JGI_CABJ4484.rev NIH_XGC_tropSki1 Xenopus (Silura... 50 0.16 1
(DN050501) JGI_CABA6315.fwd NIH_XGC_tropKid1 Xenopus (Silura... 50 0.16 1
(DN050500) JGI_CABA6315.rev NIH_XGC_tropKid1 Xenopus (Silura... 50 0.16 1
(DN048962) JGI_CABA5394.fwd NIH_XGC_tropKid1 Xenopus (Silura... 50 0.16 1
(DN003377) JGI_CAAQ4625.rev NIH_XGC_tropHrt1 Xenopus (Silura... 50 0.16 1
(CX918214) JGI_CAAN6570.rev NIH_XGC_tropTe4 Xenopus (Siluran... 50 0.16 1
(CX381393) JGI_XZT53030.rev NIH_XGC_tropTad5 Xenopus (Silura... 50 0.16 1
(CX340221) JGI_XZT72613.fwd NIH_XGC_tropTad5 Xenopus (Silura... 50 0.16 1
(CX326167) JGI_XZT15089.rev NIH_XGC_tropTad5 Xenopus (Silura... 50 0.16 1
(CX317432) JGI_XZT67006.rev NIH_XGC_tropTad5 Xenopus (Silura... 50 0.16 1
(CR422585) Xenopus tropicalis EST, clone TTbA048c10 3'. 50 0.16 1
(BX691902) Xenopus tropicalis EST, clone TNeu097c05 3'. 50 0.16 1
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 36 0.26 11
(AC122304) Mus musculus BAC clone RP23-283G11 from 18, compl... 38 0.35 2
(AC144658) Medicago truncatula clone mth2-31g20, complete se... 42 0.37 4
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 32 0.40 11
(AZ862012) 2M0169A11F Mouse 10kb plasmid UUGC1M library Mus ... 38 0.46 2
(AC171499) Medicago truncatula chromosome 8 clone mth2-157b1... 38 0.47 4
(EK454054) 1095467864730 Global-Ocean-Sampling_GS-32-01-01-1... 46 0.47 2
(EL911622) INIT2_47_C08.b1_A006 G5 trophont cDNA (INIT2) Ich... 36 0.48 2
(AY929384) Haematobia irritans strain Kluang tRNA-Ile gene, ... 28 0.50 5
(EA102818) Sequence 201 from patent US 7195870. 44 0.50 2
(BD453058) Diagnosis of Diseases Associated with tumor suppr... 44 0.50 2
(AX346986) Sequence 2057 from Patent WO0200928. 44 0.50 2
(AX344876) Sequence 301 from Patent WO0200927. 44 0.50 2
(AX323809) Sequence 297 from Patent WO0192565. 44 0.50 2
(AX278038) Sequence 201 from Patent WO0177375. 44 0.50 2
(AX251537) Sequence 505 from Patent WO0168912. 44 0.50 2
(BZ465484) BONRK87TF BO_1.6_2_KB_tot Brassica oleracea genom... 42 0.52 2
(EK108738) 1092963079168 Global-Ocean-Sampling_GS-31-01-01-1... 42 0.52 2
(DQ832717) Phytophthora sojae mitochondrion, complete genome. 44 0.53 3
(AC092512) Papio anubis clone RP41-453F17, WORKING DRAFT SEQ... 40 0.57 3
(AC150721) Callithrix jacchus clone CH259-230J2, WORKING DRA... 46 0.61 3
(BJ420680) Dictyostelium discoideum cDNA clone:ddv40h03, 5' ... 36 0.62 3
(AM446178) Vitis vinifera contig VV78X168871.5, whole genome... 48 0.62 1
(AM441670) Vitis vinifera contig VV78X066716.7, whole genome... 48 0.62 1
(AC189599) Brassica rapa subsp. pekinensis clone KBrH014H10,... 48 0.62 1
(AC027328) Homo sapiens chromosome 5 clone CTD-2136J7, compl... 48 0.62 1
(AC017010) Homo sapiens chromosome 5 clone RP11-132J20, WORK... 48 0.62 1
(ER443487) 1092963822082 Global-Ocean-Sampling_GS-35-01-01-1... 48 0.62 1
(EJ570710) 1092960037181 Global-Ocean-Sampling_GS-29-01-01-1... 48 0.62 1
(EJ537583) 1092955270622 Global-Ocean-Sampling_GS-29-01-01-1... 48 0.62 1
(ED526588) KBrB116A12R KBrB, Brassica rapa BamHI BAC library... 48 0.62 1
(ED519592) KBrB106A12R KBrB, Brassica rapa BamHI BAC library... 48 0.62 1
(ED514383) KBrB098L11R KBrB, Brassica rapa BamHI BAC library... 48 0.62 1
(DE352811) Bombyx mori genomic DNA, BAC clone:BET_071_H07. 48 0.62 1
(EL924597) NY4Th2_131_H04.b1_A039 NY4 theronts Ichthyophthir... 48 0.62 1
(DB750592) Apis mellifera head cDNA, RIKEN full-length enric... 48 0.62 1
(CF357725) rm94h03.y1 Meloidogyne arenaria J2 SMART pGEM Mel... 48 0.62 1
(EW964990) BRHL_02_G22_T7 Headlice composite library with al... 48 0.62 1
(AC138410) Homo sapiens chromosome 5 clone RP11-1124O10, com... 44 0.67 5
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 40 0.70 11
(AC006756) Caenorhabditis elegans clone Y40C7, *** SEQUENCIN... 38 0.75 6
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 34 0.76 9
(AC139496) Homo sapiens chromosome 5 clone RP11-851G6, WORKI... 44 1.0 6
(CU571240) M.truncatula DNA sequence from clone MTH2-54P7 on... 40 1.1 5
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 34 1.1 6
(AL035475) Plasmodium falciparum MAL4P2. 32 1.2 10
(EJ360699) 1092963685480 Global-Ocean-Sampling_GS-28-01-01-1... 36 1.2 3
(AM433644) Vitis vinifera contig VV78X223856.7, whole genome... 46 1.2 3
(AC139780) Homo sapiens chromosome 5 clone RP11-1068H3, WORK... 44 1.2 4
(AC155259) Mus musculus BAC clone RP24-70C15 from 9, complet... 36 1.3 2
(AC221561) Bos taurus clone CH240-391P18, WORKING DRAFT SEQU... 34 1.3 2
(AC026325) Homo sapiens 3 BAC RP11-335L9 (Roswell Park Cance... 34 1.3 2
(AC074268) Homo sapiens chromosome 3 clone RP11-266I5, WORKI... 34 1.3 2
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 36 1.4 9
(AL049185) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 36 1.5 11
(EA102713) Sequence 96 from patent US 7195870. 36 1.5 5
(AX323620) Sequence 108 from Patent WO0192565. 36 1.5 5
(AX277933) Sequence 96 from Patent WO0177375. 36 1.5 5
(AC140143) Homo sapiens chromosome 5 clone RP11-1427J15, WOR... 44 1.5 3
(AC139458) Homo sapiens chromosome 5 clone RP11-1068P12, WOR... 44 1.6 3
(DU350049) 1098268174374 CHORI-243 Ovis aries genomic clone ... 34 1.7 2
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s... 38 1.7 10

>(BJ363610) Dictyostelium discoideum cDNA clone:ddc27e16, 5' end,
single read.
Length = 619

Score = 722 bits (364), Expect(3) = 0.0
Identities = 364/364 (100%)
Strand = Plus / Plus


Query: 152 ttattttatcataaacaagccaatgaaaaacatagtggattcgttgatctaagacaatgt 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 ttattttatcataaacaagccaatgaaaaacatagtggattcgttgatctaagacaatgt 211


Query: 212 ataataaaacaaagtgattgtacagaaaaagagaatatatttgaaattaatacaagtaat 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ataataaaacaaagtgattgtacagaaaaagagaatatatttgaaattaatacaagtaat 271


Query: 272 agaatatatttattctctgccgattcaaaatcagagatggaagattggatgagaagtatt 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agaatatatttattctctgccgattcaaaatcagagatggaagattggatgagaagtatt 331


Query: 332 tacactcattcaaaagttcaacaagagaatgacctaattgaacgtgcagaatacatcata 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tacactcattcaaaagttcaacaagagaatgacctaattgaacgtgcagaatacatcata 391


Query: 392 agggatcaatcattatttaaatcaaattacgttgatgatgaatttttaaaatttaaaaat 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 agggatcaatcattatttaaatcaaattacgttgatgatgaatttttaaaatttaaaaat 451


Query: 452 acttttaatccatatatatttcaatcattatcattatcaactttatcacctgatgattta 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 acttttaatccatatatatttcaatcattatcattatcaactttatcacctgatgattta 511


Query: 512 aata 515
||||
Sbjct: 512 aata 515

Score = 121 bits (61), Expect(3) = 0.0
Identities = 61/61 (100%)
Strand = Plus / Plus


Query: 1 atatatacaattttatgtaaaaataattaaataatgaaaaatgaaccattatccaggtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atatatacaattttatgtaaaaataattaaataatgaaaaatgaaccattatccaggtga 60


Query: 61 g 61
|
Sbjct: 61 g 61

Score = 83.8 bits (42), Expect(3) = 0.0
Identities = 42/42 (100%)
Strand = Plus / Plus


Query: 578 aatgattttaatataaattcaaatttaccaagttcattattg 619
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 aatgattttaatataaattcaaatttaccaagttcattattg 619

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 917,795,727
Number of extensions: 62708926
Number of successful extensions: 6047196
Number of sequences better than 10.0: 480
Length of query: 971
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 947
Effective length of database: 97,308,875,965
Effective search space: 92151505538855
Effective search space used: 92151505538855
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.30
Homology vs Protein
Query= Contig-U11670-1 (Contig-U11670-1Q) /CSM_Contig/Contig-U11670-1Q.Seq.d
(971 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AB118104_1(AB118104|pid:none) Entamoeba histolytica gene for hyp... 68 5e-10
AF302149_1(AF302149|pid:none) Gallus gallus tandem PH domain-con... 65 3e-09
AB005237_11(AB005237|pid:none) Arabidopsis thaliana genomic DNA,... 64 8e-09
BT071749_1(BT071749|pid:none) Picea sitchensis clone WS0451_O16 ... 61 7e-08
CR954212_114(CR954212|pid:none) Ostreococcus tauri strain OTTH05... 60 9e-08
(Q3ZBA3) RecName: Full=Pleckstrin homology domain-containing fam... 60 1e-07
BC167382_1(BC167382|pid:none) Xenopus tropicalis hypothetical pr... 60 1e-07
AK291842_1(AK291842|pid:none) Homo sapiens cDNA FLJ75843 complet... 60 1e-07
CR847826_1(CR847826|pid:none) Zebrafish DNA sequence from clone ... 60 1e-07
BT071037_1(BT071037|pid:none) Picea sitchensis clone WS02766_P14... 59 2e-07
AK342598_1(AK342598|pid:none) Acyrthosiphon pisum ACYPI004941 mR... 59 3e-07
CR858155_1(CR858155|pid:none) Pongo abelii mRNA; cDNA DKFZp469G0... 59 3e-07
BC088682_1(BC088682|pid:none) Xenopus laevis hypothetical LOC496... 59 3e-07
BT045566_1(BT045566|pid:none) Salmo salar clone ssal-rgf-525-017... 58 4e-07
AC117176_43(AC117176|pid:none) Dictyostelium discoideum chromoso... 58 4e-07
AK042324_1(AK042324|pid:none) Mus musculus 3 days neonate thymus... 58 4e-07
AK296068_1(AK296068|pid:none) Homo sapiens cDNA FLJ51480 complet... 58 6e-07
CR382295_2(CR382295|pid:none) Zebrafish DNA sequence from clone ... 57 7e-07
AM472375_2(AM472375|pid:none) Vitis vinifera contig VV78X002492.... 57 7e-07
BC122736_1(BC122736|pid:none) Bos taurus pleckstrin homology dom... 57 1e-06
BT046464_1(BT046464|pid:none) Salmo salar clone ssal-evf-515-382... 56 2e-06
AB209407_1(AB209407|pid:none) Homo sapiens mRNA for pleckstrin h... 56 2e-06
BX664700_3(BX664700|pid:none) Human DNA sequence from clone WI2-... 56 2e-06
AF286160_1(AF286160|pid:none) Homo sapiens Tandem PH Domain Cont... 56 2e-06
BC128752_1(BC128752|pid:none) Rattus norvegicus pleckstrin homol... 56 2e-06
DQ829778_1(DQ829778|pid:none) Branchiostoma belcheri tsingtaunes... 55 3e-06
CP000592_118(CP000592|pid:none) Ostreococcus lucimarinus CCE9901... 55 3e-06
AK314660_1(AK314660|pid:none) Homo sapiens cDNA, FLJ95507, highl... 55 3e-06
AK295896_1(AK295896|pid:none) Homo sapiens cDNA FLJ56902 complet... 55 3e-06
BT056613_1(BT056613|pid:none) Salmo salar clone ssal-evf-554-235... 55 3e-06
BT080786_1(BT080786|pid:none) Caligus clemensi clone ccle-evs-51... 55 4e-06
AL023828_27(AL023828|pid:none) Caenorhabditis elegans YAC Y17G7B... 55 4e-06
AJ310446_1(AJ310446|pid:none) Oncorhynchus mykiss mRNA for Pleck... 55 4e-06
BT080347_1(BT080347|pid:none) Caligus clemensi clone ccle-evs-50... 55 4e-06
EF145537_1(EF145537|pid:none) Populus trichocarpa clone WS01125_... 55 4e-06
AL023828_28(AL023828|pid:none) Caenorhabditis elegans YAC Y17G7B... 55 4e-06
T26508(T26508)hypothetical protein Y17G7B.15 - Caenorhabditis el... 55 4e-06
AE014298_127(AE014298|pid:none) Drosophila melanogaster chromoso... 55 5e-06
(Q9W5D0) RecName: Full=Uncharacterized protein CG42248; 55 5e-06
AY241695_1(AY241695|pid:none) Mus musculus IRF4-binding protein ... 55 5e-06
CR860022_1(CR860022|pid:none) Pongo abelii mRNA; cDNA DKFZp459M1... 54 6e-06
(Q0CKU4) RecName: Full=Sterol 3-beta-glucosyltransferase; ... 54 6e-06
BC076776_1(BC076776|pid:none) Xenopus laevis pleckstrin homology... 54 8e-06
AC116986_113(AC116986|pid:none) Dictyostelium discoideum chromos... 54 8e-06
BT072585_1(BT072585|pid:none) Salmo salar clone ssal-rgf-531-222... 53 1e-05
AP007171_427(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 53 1e-05
BC090556_1(BC090556|pid:none) Xenopus tropicalis pleckstrin, mRN... 53 2e-05
AF277804_1(AF277804|pid:none) Dictyostelium discoideum PakC mRNA... 53 2e-05
AC135421_4(AC135421|pid:none) Oryza sativa (japonica cultivar-gr... 53 2e-05
AK220339_1(AK220339|pid:none) Mus musculus mRNA for mKIAA0403 pr... 53 2e-05
AL596062_4(AL596062|pid:none) Mouse DNA sequence from clone RP23... 53 2e-05
AK138030_1(AK138030|pid:none) Mus musculus 16 days neonate thymu... 53 2e-05
(Q55GV3) RecName: Full=Serine/threonine-protein kinase pakC; ... 53 2e-05
(Q9ST43) RecName: Full=Pleckstrin homology domain-containing pro... 52 2e-05
BC142337_1(BC142337|pid:none) Bos taurus differentially expresse... 52 2e-05
AK072489_1(AK072489|pid:none) Oryza sativa Japonica Group cDNA c... 52 2e-05
AK222401_1(AK222401|pid:none) Ciona intestinalis mRNA for zinc f... 52 2e-05
AB005903_1(AB005903|pid:none) Arabidopsis thaliana AtPH1 mRNA, c... 52 2e-05
(Q7S1I0) RecName: Full=Sterol 3-beta-glucosyltransferase; ... 52 2e-05
(Q7SYB5) RecName: Full=Differentially expressed in FDCP 6 homolo... 52 2e-05
(Q80VL0) RecName: Full=Interactor protein for cytohesin exchange... 52 4e-05
Y11215_1(Y11215|pid:none) Homo sapiens mRNA for SKAP55 protein. 52 4e-05
(A1CYS1) RecName: Full=Sterol 3-beta-glucosyltransferase; ... 51 5e-05
(A2QNQ5) RecName: Full=Sterol 3-beta-glucosyltransferase; ... 51 5e-05
BC061706_1(BC061706|pid:none) Danio rerio pleckstrin, mRNA (cDNA... 51 5e-05
(Q86WV1) RecName: Full=Src kinase-associated phosphoprotein 1; A... 51 5e-05
BT088093_1(BT088093|pid:none) Zea mays full-length cDNA clone ZM... 51 5e-05
AM270135_18(AM270135|pid:none) Aspergillus niger contig An07c018... 51 5e-05
AY891075_1(AY891075|pid:none) Synthetic construct Homo sapiens c... 51 5e-05
AB095948_1(AB095948|pid:none) Homo sapiens mRNA for KIAA2028 pro... 50 9e-05
(Q8IVE3) RecName: Full=Pleckstrin homology domain-containing fam... 50 9e-05
BC154100_1(BC154100|pid:none) Xenopus tropicalis hypothetical pr... 50 9e-05
AL833400_1(AL833400|pid:none) Homo sapiens mRNA; cDNA DKFZp313A1... 50 9e-05
BC047870_1(BC047870|pid:none) Homo sapiens src kinase associated... 50 9e-05
AB092812_1(AB092812|pid:none) Rattus norvegicus mRNA for SKAP55 ... 50 1e-04
AK147622_1(AK147622|pid:none) Mus musculus adult male brain UNDE... 50 1e-04
AL832207_1(AL832207|pid:none) Homo sapiens mRNA; cDNA DKFZp686J0... 50 1e-04
BC024692_1(BC024692|pid:none) Mus musculus myosin X, mRNA (cDNA ... 50 1e-04
BC156151_1(BC156151|pid:none) Synthetic construct Mus musculus c... 50 1e-04
AB384067_1(AB384067|pid:none) Synthetic construct DNA, clone: pF... 50 1e-04
(Q9Y2H5) RecName: Full=Pleckstrin homology domain-containing fam... 50 1e-04
AK122371_1(AK122371|pid:none) Mus musculus mRNA for mKIAA0799 pr... 50 1e-04
AC116963_26(AC116963|pid:none) Dictyostelium discoideum chromoso... 50 1e-04
A59297(A59297) myosin X - mouse &AJ249706_1(AJ249706|pid:none) 50 1e-04
(Q7SIG6) RecName: Full=Arf-GAP with SH3 domain, ANK repeat and P... 50 1e-04
AK172944_1(AK172944|pid:none) Mus musculus mRNA for mKIAA0400 pr... 50 1e-04
AK147656_1(AK147656|pid:none) Mus musculus cDNA, RIKEN full-leng... 50 1e-04
AC117072_36(AC117072|pid:none) Dictyostelium discoideum chromoso... 50 2e-04
CR381585_2(CR381585|pid:none) Zebrafish DNA sequence from clone ... 50 2e-04
BC017504_1(BC017504|pid:none) Homo sapiens cDNA clone MGC:23250 ... 49 2e-04
AK290396_1(AK290396|pid:none) Homo sapiens cDNA FLJ78435 complet... 49 2e-04
D29642_1(D29642|pid:none) Homo sapiens KIAA0053 mRNA, partial cds. 49 2e-04
(Q4WID6) RecName: Full=Sterol 3-beta-glucosyltransferase; ... 49 2e-04
AB383728_1(AB383728|pid:none) Synthetic construct DNA, clone: pF... 49 2e-04
(Q00IB7) RecName: Full=Pleckstrin homology domain-containing fam... 49 2e-04
AK314756_1(AK314756|pid:none) Homo sapiens cDNA, FLJ95623, highl... 49 2e-04
CP000499_290(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 49 2e-04
AK029252_1(AK029252|pid:none) Mus musculus 0 day neonate head cD... 49 2e-04
AK298669_1(AK298669|pid:none) Homo sapiens cDNA FLJ61332 complet... 49 2e-04
AC015969_2(AC015969|pid:none) Homo sapiens BAC clone RP11-218N6 ... 49 2e-04
AY241694_1(AY241694|pid:none) Homo sapiens IRF4-binding protein ... 49 2e-04
BC129036_1(BC129036|pid:none) Danio rerio zgc:153917, mRNA (cDNA... 49 2e-04
AK303591_1(AK303591|pid:none) Homo sapiens cDNA FLJ59112 complet... 49 2e-04
BC125583_1(BC125583|pid:none) Mus musculus pleckstrin homology d... 49 2e-04
(Q9Y4F1) RecName: Full=FERM, RhoGEF and pleckstrin domain-contai... 49 3e-04
(Q6Q308) RecName: Full=Pleckstrin; &AY563035_1(AY563035|pid:none) 49 3e-04
BT015252_1(BT015252|pid:none) Drosophila melanogaster LP17217 fu... 49 3e-04
AM393217_1(AM393217|pid:none) Synthetic construct Homo sapiens c... 49 3e-04
AK295630_1(AK295630|pid:none) Homo sapiens cDNA FLJ58530 complet... 49 3e-04
BC060484_1(BC060484|pid:none) Xenopus laevis hypothetical protei... 49 3e-04
AB385176_1(AB385176|pid:none) Synthetic construct DNA, clone: pF... 49 3e-04
(Q9HD67) RecName: Full=Myosin-X; AltName: Full=Unconventional my... 49 3e-04
AY893971_1(AY893971|pid:none) Synthetic construct Homo sapiens c... 49 3e-04
AC116960_51(AC116960|pid:none) Dictyostelium discoideum chromoso... 49 3e-04
(Q9JHK5) RecName: Full=Pleckstrin; &AF073294_1(AF073294|pid:non... 49 3e-04
AF132021_1(AF132021|pid:none) Homo sapiens myosin X (MYO10) mRNA... 49 3e-04
BT082694_1(BT082694|pid:none) Anoplopoma fimbria clone afim-evh-... 49 3e-04
AK038804_1(AK038804|pid:none) Mus musculus adult male hypothalam... 49 3e-04
AB173843_1(AB173843|pid:none) Macaca fascicularis brain cDNA clo... 49 3e-04
BC047918_1(BC047918|pid:none) Homo sapiens Rho GTPase activating... 49 3e-04
(Q8N264) RecName: Full=Rho GTPase-activating protein 24; AltName... 49 3e-04
AK091196_1(AK091196|pid:none) Homo sapiens cDNA FLJ33877 fis, cl... 49 3e-04
AK316138_1(AK316138|pid:none) Homo sapiens cDNA, FLJ79037 comple... 49 3e-04
AL832428_1(AL832428|pid:none) Homo sapiens mRNA; cDNA DKFZp762A0... 49 3e-04
AX405628_1(AX405628|pid:none) Sequence 43 from Patent WO0222660. 49 3e-04
EF594311_11(EF594311|pid:none) Astatotilapia burtoni clone BAC 1... 49 3e-04
AB018342_1(AB018342|pid:none) Homo sapiens mRNA for KIAA0799 pro... 49 3e-04
AF303745_1(AF303745|pid:none) Mus musculus pleckstrin 1 small is... 49 3e-04
EF043946_1(EF043946|pid:none) Synthetic construct clone ATCC 106... 49 3e-04
AK074717_1(AK074717|pid:none) Homo sapiens cDNA FLJ90236 fis, cl... 49 3e-04
(Q920G0) RecName: Full=Src kinase-associated phosphoprotein 2; A... 49 3e-04
(O43150) RecName: Full=Arf-GAP with SH3 domain, ANK repeat and P... 48 4e-04
AB007860_1(AB007860|pid:none) Homo sapiens KIAA0400 mRNA, partia... 48 4e-04
(Q6PG29) RecName: Full=Src kinase-associated phosphoprotein 2; A... 48 4e-04
DQ893586_1(DQ893586|pid:none) Synthetic construct clone IMAGE:10... 48 4e-04
(Q8WWN9) RecName: Full=Interactor protein for cytohesin exchange... 48 4e-04
BC063308_1(BC063308|pid:none) Homo sapiens ArfGAP with SH3 domai... 48 4e-04
CU633870_30(CU633870|pid:none) Podospora anserina genomic DNA ch... 48 4e-04
AB007863_1(AB007863|pid:none) Homo sapiens KIAA0403 mRNA, partia... 48 4e-04
(Q5RDS2) RecName: Full=Src kinase-associated phosphoprotein 2; A... 48 4e-04
S00755(S00755;A45762) pleckstrin - human &X07743_1(X07743|pid:n... 48 4e-04
AY891475_1(AY891475|pid:none) Synthetic construct Homo sapiens c... 48 4e-04
(P79114) RecName: Full=Myosin-X; AltName: Full=Unconventional my... 48 4e-04
AK297391_1(AK297391|pid:none) Homo sapiens cDNA FLJ59285 partial... 48 6e-04
(Q9HAU0) RecName: Full=Pleckstrin homology domain-containing fam... 48 6e-04
AK299216_1(AK299216|pid:none) Homo sapiens cDNA FLJ51950 complet... 48 6e-04
AK295151_1(AK295151|pid:none) Homo sapiens cDNA FLJ61590 partial... 48 6e-04
(O75563) RecName: Full=Src kinase-associated phosphoprotein 2; A... 48 6e-04
AK296277_1(AK296277|pid:none) Homo sapiens cDNA FLJ59284 partial... 48 6e-04
AC003999_1(AC003999|pid:none) Homo sapiens PAC clone RP5-1139P1 ... 48 6e-04
AK294739_1(AK294739|pid:none) Homo sapiens cDNA FLJ59321 complet... 48 6e-04
AB051473_1(AB051473|pid:none) Homo sapiens mRNA for KIAA1686 pro... 48 6e-04
BC070174_1(BC070174|pid:none) Homo sapiens pleckstrin homology d... 48 6e-04
AK075810_1(AK075810|pid:none) Mus musculus 10 day old male pancr... 48 6e-04
AB208967_1(AB208967|pid:none) Homo sapiens mRNA for PLEK protein... 47 8e-04
(Q7Z5H3) RecName: Full=Rho GTPase-activating protein 22; AltName... 47 8e-04
BC043327_1(BC043327|pid:none) Mus musculus FERM, RhoGEF (Arhgef)... 47 8e-04
BC030329_1(BC030329|pid:none) Mus musculus FERM, RhoGEF (Arhgef)... 47 8e-04
AK293579_1(AK293579|pid:none) Homo sapiens cDNA FLJ56006 complet... 47 8e-04
BC004009_1(BC004009|pid:none) Mus musculus FERM, RhoGEF (Arhgef)... 47 8e-04
AL929161_1(AL929161|pid:none) Zebrafish DNA sequence from clone ... 47 8e-04
BX248111_6(BX248111|pid:none) Zebrafish DNA sequence from clone ... 47 8e-04
BC027077_1(BC027077|pid:none) Mus musculus FERM, RhoGEF (Arhgef)... 47 8e-04
AK034903_1(AK034903|pid:none) Mus musculus 12 days embryo embryo... 47 8e-04
BC115308_1(BC115308|pid:none) Danio rerio si:dkey-8l13.4, mRNA (... 47 0.001
(Q5KK25) RecName: Full=Sterol 3-beta-glucosyltransferase; ... 47 0.001
AK289546_1(AK289546|pid:none) Homo sapiens cDNA FLJ77448 complet... 47 0.001
(Q64398) RecName: Full=Diacylglycerol kinase eta; Short... 47 0.001
(Q86XP1) RecName: Full=Diacylglycerol kinase eta; Short... 47 0.001
BT026166_1(BT026166|pid:none) Bos taurus Rho GTPase activating p... 47 0.001
AK172990_1(AK172990|pid:none) Mus musculus mRNA for mKIAA0640 pr... 47 0.001
AK129423_1(AK129423|pid:none) Mus musculus mRNA for mKIAA1686 pr... 47 0.001
BX005395_4(BX005395|pid:none) Zebrafish DNA sequence from clone ... 47 0.001
(Q8BL80) RecName: Full=Rho GTPase-activating protein 22; AltName... 47 0.001
AB078967_1(AB078967|pid:none) Homo sapiens DGKH-1 mRNA for diacy... 47 0.001
(A7ERM5) RecName: Full=Sterol 3-beta-glucosyltransferase; ... 47 0.001
BC124514_1(BC124514|pid:none) Danio rerio zgc:154018, mRNA (cDNA... 47 0.001
AK144289_1(AK144289|pid:none) Mus musculus adult male accessory ... 47 0.001
BT045613_1(BT045613|pid:none) Salmo salar clone ssal-rgf-526-208... 47 0.001
AK075159_1(AK075159|pid:none) Homo sapiens cDNA FLJ90678 fis, cl... 47 0.001
BC155854_1(BC155854|pid:none) Danio rerio si:ch211-239h19.1, mRN... 47 0.001
AK076000_1(AK076000|pid:none) Mus musculus 10 days embryo whole ... 47 0.001
AK290818_1(AK290818|pid:none) Homo sapiens cDNA FLJ76033 complet... 47 0.001
BX005083_7(BX005083|pid:none) Zebrafish DNA sequence from clone ... 47 0.001
AB365481_1(AB365481|pid:none) Colletotrichum lagenarium ClaATG26... 47 0.001
DQ848969_1(DQ848969|pid:none) Scophthalmus maximus clone sba1473... 46 0.002
AK169584_1(AK169584|pid:none) Mus musculus 2 days neonate thymus... 46 0.002
BC089655_1(BC089655|pid:none) Xenopus tropicalis dual adaptor of... 46 0.002
BX470224_4(BX470224|pid:none) Zebrafish DNA sequence from clone ... 46 0.002
AK145745_1(AK145745|pid:none) Mus musculus blastocyst blastocyst... 46 0.002
BX663499_10(BX663499|pid:none) Zebrafish DNA sequence from clone... 46 0.002
AF163255_1(AF163255|pid:none) Mus musculus adaptor protein DAPP1... 46 0.002
(Q9UN19) RecName: Full=Dual adapter for phosphotyrosine and 3-ph... 46 0.002
(Q5ZK62) RecName: Full=ARFGAP with coiled-coil, ANK repeat and P... 46 0.002
AC110299_3(AC110299|pid:none) Homo sapiens BAC clone RP11-491D2 ... 46 0.002
(Q8N4B1) RecName: Full=Protein FAM109A; &BC034809_1(BC034809|pi... 46 0.002
(O94887) RecName: Full=FERM, RhoGEF and pleckstrin domain-contai... 46 0.002
AK169897_1(AK169897|pid:none) Mus musculus NOD-derived CD11c +ve... 46 0.002
AB018336_1(AB018336|pid:none) Homo sapiens mRNA for KIAA0793 pro... 46 0.002
AL122052_1(AL122052|pid:none) Homo sapiens mRNA; cDNA DKFZp434M2... 46 0.002
CU633900_974(CU633900|pid:none) Podospora anserina genomic DNA c... 46 0.002
AK137444_1(AK137444|pid:none) Mus musculus adult male bone cDNA,... 46 0.002
BT044657_1(BT044657|pid:none) Salmo salar clone ssal-rgf-002-075... 46 0.002
AK299344_1(AK299344|pid:none) Homo sapiens cDNA FLJ61356 complet... 46 0.002
(Q5FVC7) RecName: Full=ARFGAP with coiled-coil, ANK repeat and P... 45 0.003
BC075627_1(BC075627|pid:none) Mus musculus diacylglycerol kinase... 45 0.003
(Q6IVG4) RecName: Full=ARFGAP with coiled-coil, ANK repeat and P... 45 0.003
BC157669_1(BC157669|pid:none) Xenopus tropicalis hypothetical pr... 45 0.003
(Q15057) RecName: Full=ARFGAP with coiled-coil, ANK repeat and P... 45 0.003
AK147319_1(AK147319|pid:none) Mus musculus cDNA, RIKEN full-leng... 45 0.003
CU467619_1(CU467619|pid:none) Zebrafish DNA sequence from clone ... 45 0.003
BC070750_1(BC070750|pid:none) Xenopus laevis hypothetical protei... 45 0.003
AJ720581_1(AJ720581|pid:none) Gallus gallus mRNA for hypothetica... 45 0.003
BC060767_1(BC060767|pid:none) Homo sapiens ArfGAP with coiled-co... 45 0.003
BX088564_2(BX088564|pid:none) Zebrafish DNA sequence from clone ... 45 0.003
AK313728_1(AK313728|pid:none) Homo sapiens cDNA, FLJ94328, highl... 45 0.004
(Q91VS8) RecName: Full=FERM, RhoGEF and pleckstrin domain-contai... 45 0.004
CR749312_1(CR749312|pid:none) Homo sapiens mRNA; cDNA DKFZp779B2... 45 0.004
BC043389_1(BC043389|pid:none) Homo sapiens SET binding factor 2,... 45 0.004
AK123621_1(AK123621|pid:none) Homo sapiens cDNA FLJ41627 fis, cl... 45 0.004
BC101466_1(BC101466|pid:none) Homo sapiens SET binding factor 2,... 45 0.004
BX538184_1(BX538184|pid:none) Homo sapiens mRNA; cDNA DKFZp686G2... 45 0.004
BC063656_1(BC063656|pid:none) Homo sapiens SET binding factor 2,... 45 0.004
AC004895_2(AC004895|pid:none) Homo sapiens PAC clone RP4-810E6 f... 45 0.004
BC053867_1(BC053867|pid:none) Homo sapiens SET binding factor 2,... 45 0.004
BC146071_1(BC146071|pid:none) Bos taurus SWAP-70 protein, mRNA (... 45 0.004
BC089739_1(BC089739|pid:none) Xenopus tropicalis src kinase asso... 45 0.004
AK168566_1(AK168566|pid:none) Mus musculus 16 days embryo kidney... 45 0.004
(O08967) RecName: Full=Cytohesin-3; AltName: Full=PH, SEC7 and c... 45 0.004
AC004895_1(AC004895|pid:none) Homo sapiens PAC clone RP4-810E6 f... 45 0.004
BC139884_1(BC139884|pid:none) Danio rerio hypothetical protein L... 45 0.005
BC123550_1(BC123550|pid:none) Bos taurus dual adaptor of phospho... 45 0.005
BC168698_1(BC168698|pid:none) Rattus norvegicus similar to SET b... 45 0.005
AM920435_915(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 45 0.005
AK096859_1(AK096859|pid:none) Homo sapiens cDNA FLJ39540 fis, cl... 45 0.005
BC015069_1(BC015069|pid:none) Mus musculus SET binding factor 2,... 45 0.005
(Q9UH65) RecName: Full=Switch-associated protein 70; Sh... 45 0.005
BC105510_1(BC105510|pid:none) Bos taurus Rho GTPase activating p... 45 0.005
AK173337_1(AK173337|pid:none) Mus musculus premature mRNA for mK... 45 0.005
AK173074_1(AK173074|pid:none) Mus musculus mRNA for mKIAA0969 pr... 45 0.005
CR548612_294(CR548612|pid:none) Paramecium tetraurelia macronucl... 45 0.005
(Q5U2Z7) RecName: Full=Rho GTPase-activating protein 24; AltName... 45 0.005
AK304104_1(AK304104|pid:none) Homo sapiens cDNA FLJ61538 complet... 45 0.005
AB383933_1(AB383933|pid:none) Synthetic construct DNA, clone: pF... 45 0.005
BC161500_1(BC161500|pid:none) Xenopus tropicalis connector enhan... 44 0.006
BC056915_1(BC056915|pid:none) Homo sapiens SET binding factor 1,... 44 0.006
U93181_1(U93181|pid:none) Homo sapiens nuclear dual-specificity ... 44 0.006
AL096767_7(AL096767|pid:none) Human DNA sequence from clone RP4-... 44 0.006
BC046169_1(BC046169|pid:none) Homo sapiens SET binding factor 1,... 44 0.006
BX571973_2(BX571973|pid:none) Zebrafish DNA sequence from clone ... 44 0.008
(A6QLU3) RecName: Full=GRB2-associated-binding protein 1; AltNam... 44 0.008
EU194251_1(EU194251|pid:none) Sus scrofa cytohesin 2 mRNA, compl... 44 0.008
AF093637_1(AF093637|pid:none) Drosophila melanogaster SET domain... 44 0.008
AK129485_1(AK129485|pid:none) Mus musculus mRNA for mKIAA3020 pr... 44 0.008
AE014297_1419(AE014297|pid:none) Drosophila melanogaster chromos... 44 0.008
AE014297_1418(AE014297|pid:none) Drosophila melanogaster chromos... 44 0.008
U78755_1(U78755|pid:none) Dictyostelium discoideum SecG (secG) m... 44 0.008
BC098209_1(BC098209|pid:none) Mus musculus SET binding factor 1,... 44 0.008
BC157935_1(BC157935|pid:none) Mus musculus SET binding factor 1,... 44 0.008
AK076039_1(AK076039|pid:none) Mus musculus 10 days embryo whole ... 44 0.008
BC158013_1(BC158013|pid:none) Mus musculus SET binding factor 1,... 44 0.008
(Q6ZPE2) RecName: Full=Myotubularin-related protein 5; AltName: ... 44 0.008
(Q54KA7) RecName: Full=Ankyrin repeat, PH and SEC7 domain contai... 44 0.008
(Q13480) RecName: Full=GRB2-associated-binding protein 1; AltNam... 44 0.008
AM270295_20(AM270295|pid:none) Aspergillus niger contig An13c001... 44 0.011
(Q15027) RecName: Full=ARFGAP with coiled-coil, ANK repeat and P... 44 0.011
AE014297_160(AE014297|pid:none) Drosophila melanogaster chromoso... 44 0.011
AB051503_1(AB051503|pid:none) Homo sapiens mRNA for KIAA1716 pro... 44 0.011
(Q5KSL6) RecName: Full=Diacylglycerol kinase kappa; Sho... 44 0.011
AK147505_1(AK147505|pid:none) Mus musculus cDNA, RIKEN full-leng... 44 0.011
AB384270_1(AB384270|pid:none) Synthetic construct DNA, clone: pF... 44 0.011
AL670236_22(AL670236|pid:none) Mouse DNA sequence from clone RP2... 44 0.011
AL592114_6(AL592114|pid:none) Human DNA sequence from clone RP11... 44 0.011
(Q96P50) RecName: Full=ArfGAP with coiled-coil, ANK repeat and P... 44 0.011
BC059497_1(BC059497|pid:none) Danio rerio zgc:73134, mRNA (cDNA ... 44 0.011
EF214918_1(EF214918|pid:none) Callithrix jacchus clone D16-48.4_... 44 0.011
BX005226_1(BX005226|pid:none) Zebrafish DNA sequence from clone ... 43 0.014
BC133093_1(BC133093|pid:none) Danio rerio cDNA clone MGC:158388 ... 43 0.014
CR392038_2(CR392038|pid:none) Zebrafish DNA sequence from clone ... 43 0.014
(B4R0A5) RecName: Full=Diacylglycerol kinase eta; Short... 43 0.014
AC104685_1(AC104685|pid:none) Homo sapiens BAC clone RP11-58H15 ... 43 0.014
AF143848_1(AF143848|pid:none) Gallus gallus pleckstrin mRNA, com... 43 0.014
(B4I4Y1) RecName: Full=Diacylglycerol kinase eta; Short... 43 0.014
(A8JQ65) RecName: Full=Diacylglycerol kinase eta; Short... 43 0.014
AE014134_3647(AE014134|pid:none) Drosophila melanogaster chromos... 43 0.019
AL162741_22(AL162741|pid:none) Human DNA sequence from clone RP5... 43 0.019
AE014134_3648(AE014134|pid:none) Drosophila melanogaster chromos... 43 0.019
BC011143_1(BC011143|pid:none) Homo sapiens SET binding factor 2,... 43 0.019
(Q0UY53) RecName: Full=Sterol 3-beta-glucosyltransferase; ... 43 0.019
GQ140625_1(GQ140625|pid:none) Rattus norvegicus GRB2-associated ... 43 0.019
(Q5R9W4) RecName: Full=Oxysterol-binding protein-related protein... 43 0.019
AB013464_1(AB013464|pid:none) Mus musculus CLM1-A mRNA for cytoh... 43 0.019
AK154449_1(AK154449|pid:none) Mus musculus NOD-derived CD11c +ve... 42 0.024
D73409_1(D73409|pid:none) Homo sapiens mRNA for diacylglycerol k... 42 0.024
AL845465_8(AL845465|pid:none) Mouse DNA sequence from clone RP23... 42 0.024
BC167450_1(BC167450|pid:none) Danio rerio pleckstrin 2, mRNA (cD... 42 0.024
BC149377_1(BC149377|pid:none) Bos taurus diacylglycerol kinase, ... 42 0.024
BT050178_1(BT050178|pid:none) Salmo salar clone ssal-eve-519-310... 42 0.024
BC125677_1(BC125677|pid:none) Xenopus tropicalis hypothetical pr... 42 0.024
(O43739) RecName: Full=Cytohesin-3; AltName: Full=PH, SEC7 and c... 42 0.032
BC171425_1(BC171425|pid:none) Danio rerio zgc:153733, mRNA (cDNA... 42 0.032
(Q9ULH1) RecName: Full=Arf-GAP with SH3 domain, ANK repeat and P... 42 0.032
AB033075_1(AB033075|pid:none) Homo sapiens mRNA for KIAA1249 pro... 42 0.032
BC093150_1(BC093150|pid:none) Danio rerio dual adaptor of phosph... 42 0.032
BC137135_1(BC137135|pid:none) Homo sapiens ArfGAP with SH3 domai... 42 0.032
AB020709_1(AB020709|pid:none) Homo sapiens mRNA for KIAA0902 pro... 42 0.042
AF102854_1(AF102854|pid:none) Rattus norvegicus membrane-associa... 42 0.042
AK292646_1(AK292646|pid:none) Homo sapiens cDNA FLJ78632 complet... 42 0.042
(Q8WXI2) RecName: Full=Connector enhancer of kinase suppressor o... 42 0.042
BC073417_1(BC073417|pid:none) Xenopus laevis MGC80883 protein, m... 42 0.042
CU104724_2(CU104724|pid:none) Zebrafish DNA sequence from clone ... 42 0.042
FM992692_218(FM992692|pid:none) Candida dubliniensis CD36 chromo... 42 0.042
AY223276_1(AY223276|pid:none) Schistosoma japonicum clone ZZD486... 42 0.042
CR860003_1(CR860003|pid:none) Pongo abelii mRNA; cDNA DKFZp459B1... 42 0.042
AK294728_1(AK294728|pid:none) Homo sapiens cDNA FLJ61239 complet... 42 0.042
AF418270_1(AF418270|pid:none) Homo sapiens connector enhancer of... 42 0.042
EU850438_10(EU850438|pid:none) Adineta vaga hypothetical protein... 42 0.042
AL645798_6(AL645798|pid:none) Zebrafish DNA sequence from clone ... 42 0.042
AB209335_1(AB209335|pid:none) Homo sapiens mRNA for Connector en... 42 0.042
(Q1AAU6) RecName: Full=Arf-GAP with SH3 domain, ANK repeat and P... 42 0.042
AK122399_1(AK122399|pid:none) Mus musculus mRNA for mKIAA0902 pr... 42 0.042
AK222817_1(AK222817|pid:none) Homo sapiens mRNA for connector en... 42 0.042
(O97902) RecName: Full=Arf-GAP with SH3 domain, ANK repeat and P... 42 0.042
U59752_1(U59752|pid:none) Human Sec7p-like protein mRNA, partial... 42 0.042
A68114_1(A68114|pid:none) Sequence 23 from Patent WO9745538. 41 0.055
BX276181_2(BX276181|pid:none) Zebrafish DNA sequence from clone ... 41 0.055
BC103717_1(BC103717|pid:none) Xenopus tropicalis TRIO and F-acti... 41 0.055
BC129009_1(BC129009|pid:none) Xenopus tropicalis hypothetical pr... 41 0.055
BC160537_1(BC160537|pid:none) Xenopus tropicalis TRIO and F-acti... 41 0.055
AK128043_1(AK128043|pid:none) Homo sapiens cDNA FLJ46163 fis, cl... 41 0.055
BC048818_1(BC048818|pid:none) Mus musculus ArfGAP with SH# domai... 41 0.055
AY128671_1(AY128671|pid:none) Drosophila virilis daughter of sev... 41 0.055
BC032777_1(BC032777|pid:none) Homo sapiens actin filament associ... 41 0.055
AK297631_1(AK297631|pid:none) Homo sapiens cDNA FLJ56849 complet... 41 0.055
(Q9VZZ9) RecName: Full=Protein daughter of sevenless; &AE014296... 41 0.055
AL050343_7(AL050343|pid:none) Human DNA sequence from clone RP4-... 41 0.055
AY813392_1(AY813392|pid:none) Schistosoma japonicum SJCHGC01551 ... 41 0.055
AK146545_1(AK146545|pid:none) Mus musculus 17 days pregnant adul... 41 0.055
X97447_1(X97447|pid:none) D.melanogaster mRNA for PH domain prot... 41 0.055
BC094581_1(BC094581|pid:none) Mus musculus ArfGAP with SH# domai... 41 0.055
A68112_1(A68112|pid:none) Sequence 21 from Patent WO9745538. 41 0.055
(Q96P48) RecName: Full=Arf-GAP, Rho-GAP domain, ANK repeat and P... 41 0.071
(Q2KI41) RecName: Full=Cytohesin-2; AltName: Full=PH, SEC7 and c... 41 0.071
AB013467_1(AB013467|pid:none) Mus musculus CLM2-A mRNA for cytoh... 41 0.071
AJ621558_1(AJ621558|pid:none) Mus musculus mRNA for ARAP1 (Centd... 41 0.071
EU652315_5(EU652315|pid:none) Adineta vaga speckle-type POZ prot... 41 0.071
BC141179_1(BC141179|pid:none) Mus musculus ArfGAP with RhoGAP do... 41 0.071
BX640463_1(BX640463|pid:none) Zebrafish DNA sequence from clone ... 41 0.071
AB383990_1(AB383990|pid:none) Synthetic construct DNA, clone: pF... 41 0.071
AK129213_1(AK129213|pid:none) Mus musculus mRNA for mKIAA0782 pr... 41 0.071
BC140792_1(BC140792|pid:none) Homo sapiens ArfGAP with RhoGAP do... 41 0.071
AC115680_13(AC115680|pid:none) Dictyostelium discoideum chromoso... 41 0.071
AK150132_1(AK150132|pid:none) Mus musculus bone marrow macrophag... 41 0.071
AB209473_1(AB209473|pid:none) Homo sapiens mRNA for centaurin de... 41 0.071
AB013469_2(AB013469|pid:none) Mus musculus CLM2 gene for cytohes... 41 0.071
(Q4LDD4) RecName: Full=Arf-GAP, Rho-GAP domain, ANK repeat and P... 41 0.071
BC144562_1(BC144562|pid:none) Homo sapiens ArfGAP with RhoGAP do... 41 0.071
AF411983_1(AF411983|pid:none) Homo sapiens centaurin delta2 mRNA... 41 0.071
AK137455_1(AK137455|pid:none) Mus musculus adult male bone cDNA,... 41 0.071
AE014134_693(AE014134|pid:none) Drosophila melanogaster chromoso... 41 0.071
BC125949_1(BC125949|pid:none) Danio rerio oxysterol binding prot... 40 0.093
(Q6C8M8) RecName: Full=Sterol 3-beta-glucosyltransferase; ... 40 0.093
AK056617_1(AK056617|pid:none) Homo sapiens cDNA FLJ32055 fis, cl... 40 0.093
BT059190_1(BT059190|pid:none) Salmo salar clone ssal-rgf-531-199... 40 0.093
(Q1ZXH8) RecName: Full=Guanine exchange factor for Rac 30; 40 0.093
BC077609_1(BC077609|pid:none) Xenopus laevis hypothetical protei... 40 0.093
BC119824_1(BC119824|pid:none) Bos taurus oxysterol binding prote... 40 0.093
AK027535_1(AK027535|pid:none) Homo sapiens cDNA FLJ14629 fis, cl... 40 0.093
BC129161_1(BC129161|pid:none) Danio rerio zgc:158223, mRNA (cDNA... 40 0.093
AK155197_1(AK155197|pid:none) Mus musculus NOD-derived CD11c +ve... 40 0.12
AB051449_1(AB051449|pid:none) Homo sapiens mRNA for KIAA1662 pro... 40 0.12
BC112832_1(BC112832|pid:none) Bos taurus TRIO and F-actin bindin... 40 0.12
FN357451_13(FN357451|pid:none) Schistosoma mansoni genome sequen... 40 0.12
EF203432_1(EF203432|pid:none) Rattus norvegicus Trio and actin b... 40 0.12
BC088419_1(BC088419|pid:none) Rattus norvegicus TRIO and F-actin... 40 0.12
Z83844_15(Z83844|pid:none) Human DNA sequence from clone RP1-37E... 40 0.12
AE014297_1815(AE014297|pid:none) Drosophila melanogaster chromos... 40 0.12
AY056465_1(AY056465|pid:none) Danio rerio protein kinase AKT-2 m... 40 0.12
AB385228_1(AB385228|pid:none) Synthetic construct DNA, clone: pF... 40 0.12
AF281030_1(AF281030|pid:none) Homo sapiens Tara mRNA, complete c... 40 0.12
AK089051_1(AK089051|pid:none) Mus musculus 2 days neonate thymus... 40 0.12
(Q96DW1) RecName: Full=TRIO and F-actin-binding protein; AltName... 40 0.12
Z83844_13(Z83844|pid:none) Human DNA sequence from clone RP1-37E... 40 0.12
BC088747_1(BC088747|pid:none) Xenopus laevis hypothetical LOC496... 40 0.12
DQ498128_1(DQ498128|pid:none) Mus musculus ArhGAP9 (Arhgap9) mRN... 40 0.12
AE014297_1813(AE014297|pid:none) Drosophila melanogaster chromos... 40 0.12
BC042760_1(BC042760|pid:none) Mus musculus TRIO and F-actin bind... 40 0.12
AK046097_1(AK046097|pid:none) Mus musculus adult male corpora qu... 40 0.12
EF203433_1(EF203433|pid:none) Rattus norvegicus Trio and actin b... 40 0.12
BC169041_1(BC169041|pid:none) Rattus norvegicus TRIO and F-actin... 40 0.12
AM392748_1(AM392748|pid:none) Synthetic construct Homo sapiens c... 40 0.12
FJ860128_3(FJ860128|pid:none) Cadophora finlandica isolate PRF15... 40 0.12
DQ278602_1(DQ278602|pid:none) Mus musculus trio-associated repea... 40 0.12
(Q99KW3) RecName: Full=TRIO and F-actin-binding protein; AltName... 40 0.12
BC003984_1(BC003984|pid:none) Mus musculus TRIO and F-actin bind... 40 0.12
AX399879_1(AX399879|pid:none) Sequence 50 from Patent WO0218424.... 40 0.12
BC077980_1(BC077980|pid:none) Xenopus laevis hypothetical protei... 40 0.12
AL589670_5(AL589670|pid:none) Mouse DNA sequence from clone RP23... 40 0.12
(A2A8Z1) RecName: Full=Oxysterol-binding protein-related protein... 40 0.12
AX392091_1(AX392091|pid:none) Sequence 1 from Patent WO0216433. ... 40 0.12
AP005112_6(AP005112|pid:none) Oryza sativa Japonica Group genomi... 40 0.12
(Q6DFG0) RecName: Full=Rho GTPase-activating protein 21-A; AltNa... 40 0.16
CR391924_2(CR391924|pid:none) Zebrafish DNA sequence from clone ... 40 0.16
T00342(T00342)hypothetical protein KIAA0580 - human (fragment) 40 0.16
BC135618_1(BC135618|pid:none) Xenopus tropicalis hypothetical pr... 40 0.16
BC161647_1(BC161647|pid:none) Xenopus tropicalis hypothetical pr... 40 0.16
BC105089_1(BC105089|pid:none) Homo sapiens ArfGAP with RhoGAP do... 40 0.16
BC074395_1(BC074395|pid:none) Xenopus laevis MGC84366 protein, m... 40 0.16
BC166132_1(BC166132|pid:none) Xenopus tropicalis cDNA clone IMAG... 40 0.16
AB011152_1(AB011152|pid:none) Homo sapiens mRNA for KIAA0580 pro... 40 0.16
BC170466_1(BC170466|pid:none) Xenopus laevis Rho GTPase activati... 40 0.16
BC167582_1(BC167582|pid:none) Xenopus tropicalis hypothetical pr... 40 0.16
(Q8WZ64) RecName: Full=Arf-GAP, Rho-GAP domain, ANK repeat and P... 40 0.16
BC153230_1(BC153230|pid:none) Bos taurus myosin phosphatase-Rho ... 40 0.16
AF439781_1(AF439781|pid:none) Homo sapiens PARX protein mRNA, co... 40 0.16
BC150258_1(BC150258|pid:none) Homo sapiens ArfGAP with RhoGAP do... 40 0.16
AK158216_1(AK158216|pid:none) Mus musculus adult inner ear cDNA,... 40 0.16
AP004463_6(AP004463|pid:none) Oryza sativa Japonica Group genomi... 39 0.21
AP008214_1086(AP008214|pid:none) Oryza sativa (japonica cultivar... 39 0.21
AY128672_1(AY128672|pid:none) Drosophila pseudoobscura daughter ... 39 0.21
(Q9WV52) RecName: Full=Pleckstrin-2; &AF157600_1(AF157600|pid:n... 39 0.21
(Q9UUE2) RecName: Full=Protein csx2; &AL109846_8(AL109846|pid:n... 39 0.21
(Q8C0D4) RecName: Full=Rho GTPase-activating protein 12; AltName... 39 0.27
AK160383_1(AK160383|pid:none) Homo sapiens mRNA for FLJ00357 pro... 39 0.27
(Q9NGQ2) RecName: Full=Kinesin-related protein 1; AltName: Full=... 39 0.27
BC120995_1(BC120995|pid:none) Homo sapiens v-akt murine thymoma ... 39 0.27
AL031633_18(AL031633|pid:none) Caenorhabditis elegans YAC Y39A1A... 39 0.27
AK297056_1(AK297056|pid:none) Homo sapiens cDNA FLJ51694 complet... 39 0.27
AK031648_1(AK031648|pid:none) Mus musculus 13 days embryo male t... 39 0.27
T26737(T26737)hypothetical protein Y39A1A.15a - Caenorhabditis e... 39 0.27
AK304209_1(AK304209|pid:none) Homo sapiens cDNA FLJ58721 complet... 39 0.27
BC141184_1(BC141184|pid:none) Mus musculus Rho GTPase activating... 39 0.27
(P31751) RecName: Full=RAC-beta serine/threonine-protein kinase;... 39 0.27
(Q60823) RecName: Full=RAC-beta serine/threonine-protein kinase;... 39 0.27
CU633438_843(CU633438|pid:none) Podospora anserina genomic DNA c... 39 0.27
AF225960_1(AF225960|pid:none) Rattus norvegicus spectrin-like pr... 39 0.35
EU975718_1(EU975718|pid:none) Zea mays clone 498036 dynamin-2A m... 39 0.35
BC048851_1(BC048851|pid:none) Mus musculus spectrin beta 3, mRNA... 39 0.35
AK172931_1(AK172931|pid:none) Mus musculus mRNA for mKIAA0302 pr... 39 0.35
(Q9QWN8) RecName: Full=Spectrin beta chain, brain 2; AltName: Fu... 39 0.35
BC079860_1(BC079860|pid:none) Mus musculus spectrin beta 3, mRNA... 39 0.35
AL773540_3(AL773540|pid:none) Mouse DNA sequence from clone RP23... 39 0.35
AL773540_2(AL773540|pid:none) Mouse DNA sequence from clone RP23... 39 0.35
BC150741_1(BC150741|pid:none) Mus musculus Rho GTPase activating... 39 0.35
AE014297_3405(AE014297|pid:none) Drosophila melanogaster chromos... 39 0.35
BT063157_1(BT063157|pid:none) Zea mays full-length cDNA clone ZM... 39 0.35
AE014297_3318(AE014297|pid:none) Drosophila melanogaster chromos... 39 0.35
AK147671_1(AK147671|pid:none) Mus musculus adult male brain UNDE... 39 0.35
BT072828_1(BT072828|pid:none) Drosophila melanogaster MIP03119 f... 39 0.35
(Q8K1N2) RecName: Full=Pleckstrin homology-like domain family B ... 39 0.35
AE014186_223(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.35
BC079628_1(BC079628|pid:none) Mus musculus spectrin beta 3, mRNA... 39 0.35
AK122508_1(AK122508|pid:none) Mus musculus premature mRNA for mK... 39 0.35
(Q6DFV3) RecName: Full=Rho GTPase-activating protein 21; AltName... 39 0.35
BC050915_1(BC050915|pid:none) Mus musculus pleckstrin homology-l... 39 0.35
AK296914_1(AK296914|pid:none) Homo sapiens cDNA FLJ59923 complet... 38 0.46
M74773_1(M74773|pid:none) Mus musculus brain beta spectrin (Spnb... 38 0.46
AL833135_1(AL833135|pid:none) Homo sapiens mRNA; cDNA DKFZp313N0... 38 0.46
A59438(A59438;B59438) KIAA1424 protein [imported] - human &AB03... 38 0.46
AK295649_1(AK295649|pid:none) Homo sapiens cDNA FLJ54686 complet... 38 0.46
(Q5T5U3) RecName: Full=Rho GTPase-activating protein 21; AltName... 38 0.46
(Q15438) RecName: Full=Cytohesin-1; AltName: Full=PH, SEC7 and c... 38 0.46
CR749654_1(CR749654|pid:none) Homo sapiens mRNA; cDNA DKFZp686J0... 38 0.46
BX537570_1(BX537570|pid:none) Homo sapiens mRNA; cDNA DKFZp686D2... 38 0.46
(Q86SQ0) RecName: Full=Pleckstrin homology-like domain family B ... 38 0.46
BC031000_1(BC031000|pid:none) Homo sapiens pleckstrin homology-l... 38 0.46
BC137891_1(BC137891|pid:none) Mus musculus RIKEN cDNA 9030420J04... 38 0.46
AK092287_1(AK092287|pid:none) Homo sapiens cDNA FLJ34968 fis, cl... 38 0.60
T49496(T49496)hypothetical protein B14D6.480 [imported] - Neuros... 38 0.60
BX001030_7(BX001030|pid:none) Zebrafish DNA sequence from clone ... 38 0.60
AB014521_1(AB014521|pid:none) Homo sapiens mRNA for KIAA0621 pro... 38 0.60
BC139788_1(BC139788|pid:none) Homo sapiens spectrin, beta, non-e... 38 0.60
EF635075_1(EF635075|pid:none) Drosophila montana strain Kemi96 d... 38 0.60
(O15020) RecName: Full=Spectrin beta chain, brain 2; AltName: Fu... 38 0.60
(Q6WCQ1) RecName: Full=Myosin phosphatase Rho-interacting protei... 38 0.60
BC090340_1(BC090340|pid:none) Rattus norvegicus spectrin, beta, ... 38 0.60
AY238344_1(AY238344|pid:none) Rattus norvegicus non-erythroid sp... 38 0.60
AY850997_1(AY850997|pid:none) Drosophila americana strain G96.48... 38 0.60
AY850993_1(AY850993|pid:none) Drosophila americana strain G96.11... 38 0.60
BC068555_1(BC068555|pid:none) Homo sapiens Rho GTPase activating... 38 0.60
AJ309466_1(AJ309466|pid:none) Homo sapiens partial GRAF gene, ex... 38 0.60
(Q5PQS3) RecName: Full=Ventricular zone-expressed PH domain-cont... 38 0.60
EF635074_1(EF635074|pid:none) Drosophila littoralis strain Kemi9... 38 0.60
AX022162_1(AX022162|pid:none) Sequence 1 from Patent EP0953042. 38 0.60
(Q8N556) RecName: Full=Actin filament-associated protein 1; AltN... 37 0.79
(Q9BE31) RecName: Full=Rho GTPase-activating protein 12; AltName... 37 0.79
AK290807_1(AK290807|pid:none) Homo sapiens cDNA FLJ75286 complet... 37 0.79
AB209676_1(AB209676|pid:none) Homo sapiens mRNA for actin filame... 37 0.79
AY574952_1(AY574952|pid:none) Danio rerio cytohesin 1-like prote... 37 0.79
AF039943_1(AF039943|pid:none) Gallus gallus serine/threonine pro... 37 0.79
AB385211_1(AB385211|pid:none) Synthetic construct DNA, clone: pF... 37 0.79
BC115362_1(BC115362|pid:none) Homo sapiens Rho GTPase activating... 37 0.79
L20302_1(L20302|pid:none) Gallus gallus neural actin filament pr... 37 0.79
BX571960_5(BX571960|pid:none) Zebrafish DNA sequence from clone ... 37 0.79
BC049429_1(BC049429|pid:none) Danio rerio GRB2-associated bindin... 37 0.79
(Q8IWW6) RecName: Full=Rho GTPase-activating protein 12; AltName... 37 0.79
(Q90738) RecName: Full=Actin filament-associated protein 1; AltN... 37 0.79
AF188700_1(AF188700|pid:none) Homo sapiens actin filament associ... 37 0.79
BT071966_1(BT071966|pid:none) Salmo salar clone ssal-rgf-505-184... 37 0.79
BC149489_1(BC149489|pid:none) Bos taurus Rho GTPase activating p... 37 0.79

>AB118104_1(AB118104|pid:none) Entamoeba histolytica gene for
hypothetical protein, complete cds, clone:Eh-6121.
&DQ212784_1(DQ212784|pid:none)
Length = 466

Score = 67.8 bits (164), Expect = 5e-10
Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +2

Query: 65 TIKSGNLYKKGKINKSWQKRWCMLSKDSKLFYHKQANEKHS-GFVDLRQCIIKQSDCTEK 241
++KSG L K+G KSW+KRWC+L+ +FY K + +S G VD+ + +K
Sbjct: 3 SVKSGFLVKQGGSWKSWKKRWCVLTPTGMIFYFKDKKDVNSKGCVDVNSASDVLLEDEKK 62

Query: 242 ENIFEINTSNRIYLFSADSKSEMEDWMRSI 331
+N F I T NR + +A+SK+E + W++++
Sbjct: 63 KNCFGIVTPNRTFFMAAESKAERDSWIQAV 92

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 940,822,540
Number of extensions: 15617367
Number of successful extensions: 44543
Number of sequences better than 10.0: 719
Number of HSP's gapped: 44014
Number of HSP's successfully gapped: 780
Length of query: 323
Length of database: 1,051,180,864
Length adjustment: 128
Effective length of query: 195
Effective length of database: 636,901,312
Effective search space: 124195755840
Effective search space used: 124195755840
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.70 gvh: 0.17 alm: 0.36 top: 0.53 tms: 0.00 mit: 0.22 mip: 0.06
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

60.0 %: nuclear
28.0 %: cytoplasmic
4.0 %: cytoskeletal
4.0 %: vacuolar
4.0 %: Golgi

>> prediction for Contig-U11670-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 1
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0