| Contig-U11647-1 |
| Contig ID |
Contig-U11647-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1749 |
| Chromosome number (1..6, M) |
2 |
| Chromosome length |
8467578 |
| Start point |
3132456 |
| End point |
3134185 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
24 |
| Number of EST |
28 |
| Link to clone list |
U11647 |
| List of clone(s) |
est1=CHB147F,1,103
est2=SLK784F,24,256
est3=SFG195F,257,804
est4=AFF170E,482,1718
est5=SFJ779F,528,1048
est6=SLG509E,552,1752
est7=SFG195Z,981,1697
est8=CHB147Z,982,1591
est9=AFG889Z,985,1698
est10=CFA645Z,986,1620
est11=SFK791Z,991,1697
est12=AFO522Z,992,1698
est13=AFC625Z,1046,1660
est14=AFG251Z,1047,1713
est15=CFC222Z,1052,1703
est16=CHD227Z,1052,1588
est17=SFE893Z,1052,1743
est18=AFA661Z,1060,1728
est19=AFO186Z,1060,1719
est20=SFG169Z,1078,1664
est21=SFC604Z,1081,1575
est22=SFJ779Z,1085,1735
est23=SFJ742Z,1095,1613
est24=AFB486Z,1110,1713
est25=AFL102Z,1123,1717
est26=SFB729Z,1180,1714
est27=AFB380Z,1248,1715
est28=SLK784Z,1579,1752
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.25 |
| Homology vs DNA |
Query= Contig-U11647-1 (Contig-U11647-1Q) /CSM_Contig/Contig-U11647-1Q.Seq.d
(1759 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 2313 0.0 3
(AU061895) Dictyostelium discoideum slug cDNA, clone SLG509. 1457 0.0 1
(BJ323659) Dictyostelium discoideum cDNA clone:dda11k17, 5' ... 1259 0.0 1
(BJ391446) Dictyostelium discoideum cDNA clone:dds13m23, 5' ... 1086 0.0 1
(BJ390029) Dictyostelium discoideum cDNA clone:dds20n19, 5' ... 1025 0.0 1
(BJ400595) Dictyostelium discoideum cDNA clone:dds13m23, 3' ... 1017 0.0 4
(BJ377398) Dictyostelium discoideum cDNA clone:ddc24m11, 3' ... 1009 0.0 2
(BJ342595) Dictyostelium discoideum cDNA clone:dda14b24, 3' ... 1009 0.0 3
(BJ373247) Dictyostelium discoideum cDNA clone:ddc2i12, 3' e... 999 0.0 3
(BJ401303) Dictyostelium discoideum cDNA clone:dds22f23, 3' ... 989 0.0 3
(BJ346190) Dictyostelium discoideum cDNA clone:dda30k05, 3' ... 987 0.0 4
(BJ340099) Dictyostelium discoideum cDNA clone:dda11k17, 3' ... 985 0.0 3
(BJ342336) Dictyostelium discoideum cDNA clone:dda13e14, 3' ... 886 0.0 2
(BJ398078) Dictyostelium discoideum cDNA clone:dds10j24, 3' ... 876 0.0 4
(BJ373871) Dictyostelium discoideum cDNA clone:ddc5k06, 3' e... 876 0.0 4
(BJ340543) Dictyostelium discoideum cDNA clone:dda2i16, 3' e... 860 0.0 4
(BJ346034) Dictyostelium discoideum cDNA clone:dda29k21, 3' ... 841 0.0 3
(BJ347042) Dictyostelium discoideum cDNA clone:dda25n19, 3' ... 825 0.0 4
(BJ341337) Dictyostelium discoideum cDNA clone:dda6a08, 3' e... 823 0.0 2
(BJ402238) Dictyostelium discoideum cDNA clone:dds20n19, 3' ... 811 0.0 4
(BJ340798) Dictyostelium discoideum cDNA clone:dda3l22, 3' e... 761 0.0 4
(BJ400521) Dictyostelium discoideum cDNA clone:dds13i17, 3' ... 825 0.0 2
(BJ345221) Dictyostelium discoideum cDNA clone:dda23c01, 3' ... 735 0.0 4
(BJ376380) Dictyostelium discoideum cDNA clone:ddc28e08, 3' ... 876 0.0 3
(BJ399143) Dictyostelium discoideum cDNA clone:dds4j07, 3' e... 622 0.0 3
(BJ399453) Dictyostelium discoideum cDNA clone:dds6g02, 3' e... 795 0.0 2
(BJ402048) Dictyostelium discoideum cDNA clone:dds20d11, 3' ... 791 0.0 3
(AU039822) Dictyostelium discoideum slug cDNA, clone SLG509. 494 0.0 3
(BJ340811) Dictyostelium discoideum cDNA clone:dda3p19, 3' e... 450 0.0 3
(AU054135) Dictyostelium discoideum slug cDNA, clone SLK784. 121 3e-41 2
(AU060650) Dictyostelium discoideum slug cDNA, clone SLK784. 100 2e-24 2
(CQ719522) Sequence 5456 from Patent WO02068579. 46 5e-10 4
(EA327731) Sequence 27 from patent US 7306910. 46 5e-10 4
(DI002294) Breast Cancer Prognostics. 46 5e-10 4
(DD090887) Breast Cancer Prognostics. 46 5e-10 4
(CQ895745) Sequence 27 from Patent EP1471154. 46 5e-10 4
(AF005361) Homo sapiens importin alpha 6 mRNA, complete cds. 46 5e-10 4
(AK314206) Homo sapiens cDNA, FLJ94934, highly similar to Ho... 46 6e-10 4
(BC047409) Homo sapiens karyopherin alpha 5 (importin alpha ... 46 1e-09 4
(CQ497168) Sequence 29035 from Patent WO0160860. 46 1e-09 4
(CQ491299) Sequence 23166 from Patent WO0160860. 46 1e-09 4
(BJ361757) Dictyostelium discoideum cDNA clone:ddc18j18, 5' ... 54 2e-09 3
(DY280828) IC0AAA52BB01RM1 CitNFL Citrus clementina cDNA 5',... 62 2e-08 2
(DY290789) IC0AAA76BE09RM1 CitNFL Citrus clementina cDNA 5',... 62 2e-08 2
(DY299531) IC0AAA98CF04RM1 CitNFL Citrus clementina cDNA 5',... 62 2e-08 2
(BJ323538) Dictyostelium discoideum cDNA clone:dda11g02, 5' ... 54 4e-08 3
(BJ327981) Dictyostelium discoideum cDNA clone:dda22p08, 5' ... 54 4e-08 3
(BJ329234) Dictyostelium discoideum cDNA clone:dda24c10, 5' ... 54 4e-08 3
(AU060618) Dictyostelium discoideum slug cDNA, clone SLK645. 54 5e-08 3
(EY762969) CR05-C1-100-060-H01-CT.F Mandarin leaf, greenhous... 62 6e-08 2
(BI560436) 603253991F1 NIH_MGC_97 Homo sapiens cDNA clone IM... 46 3e-06 3
(AI802160) tx25a02.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone ... 46 5e-06 3
(AI693204) wd68g03.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone ... 46 6e-06 3
(EE896084) B00170A FFB Bos taurus cDNA clone B0017 5', mRNA ... 44 8e-06 3
(EL733980) 10677 Full Length cDNA from the Mammalian Gene Co... 46 8e-06 3
(CB454563) 711353 MARC 6BOV Bos taurus cDNA 5', mRNA sequence. 44 1e-05 3
(CB456140) 713361 MARC 6BOV Bos taurus cDNA 3', mRNA sequence. 44 1e-05 3
(CN409426) 17000418219363 GRN_EB Homo sapiens cDNA 5', mRNA ... 46 1e-05 3
(DB019585) Homo sapiens cDNA clone TESTI1000076, 5' end, mRN... 46 1e-05 3
(BX916225) Sus Scrofa library (scan) clone scan0029.b.01, 5p... 44 1e-05 3
(AY068344) Schmidtea mediterranea clone H.10.6c(T3) unknown ... 64 2e-05 1
(DN316297) PL06023A2E06 cDNA from juvenile hermaphodites Sch... 64 2e-05 1
(DQ046759) Homo sapiens KPNA5 gene, VIRTUAL TRANSCRIPT, part... 46 4e-05 3
(EY693111) CS00-C3-700-007-H08-CT.F Sweet orange fruit, deve... 62 8e-05 1
(BX506981) Homo sapiens mRNA; EST DKFZp779O202_r1 (from clo... 46 1e-04 3
(DA472036) Homo sapiens cDNA clone DFNES1000001, 5' end, mRN... 46 2e-04 3
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041... 48 3e-04 8
(FG510626) 030629KAYB001030HT (KAYB) Actinidia chinensis you... 46 5e-04 2
(DW266267) UI-S-GN1-abv-d-04-0-UI.s1 UI-S-GN1 Euprymna scolo... 48 6e-04 2
(DB039395) Homo sapiens cDNA clone TESTI2025928, 5' end, mRN... 46 0.002 2
(DA800496) Homo sapiens cDNA clone OCBBF3004469, 5' end, mRN... 46 0.002 2
(DA332846) Homo sapiens cDNA clone BRHIP3031336, 5' end, mRN... 46 0.002 2
(BG718769) 602696921F1 NIH_MGC_97 Homo sapiens cDNA clone IM... 46 0.002 2
(BX472630) Homo sapiens mRNA; EST DKFZp686C24147_r1 (from c... 46 0.002 2
(BX491300) Homo sapiens mRNA; EST DKFZp686J0397_r1 (from cl... 46 0.002 2
(AL036137) Homo sapiens mRNA; EST DKFZp564C032_r1 (from clo... 46 0.002 2
(BG723537) 602694243F1 NIH_MGC_97 Homo sapiens cDNA clone IM... 46 0.002 2
(DR002247) TC118724 Human fetal brain, large insert, pCMV ex... 46 0.002 2
(BI562259) 603254983F1 NIH_MGC_97 Homo sapiens cDNA clone IM... 46 0.002 2
(BG722891) 602695382F1 NIH_MGC_97 Homo sapiens cDNA clone IM... 46 0.002 2
(BJ330234) Dictyostelium discoideum cDNA clone:dda27g20, 5' ... 54 0.007 2
(AU060989) Dictyostelium discoideum slug cDNA, clone SLC533. 54 0.007 2
(BJ366340) Dictyostelium discoideum cDNA clone:ddc38k14, 5' ... 54 0.007 2
(CU407116) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.016 7
(EY701180) CS00-C3-700-104-B06-CT.F Sweet orange fruit, deve... 54 0.019 1
(EY700748) CS00-C3-700-098-E05-CT.F Sweet orange fruit, deve... 54 0.019 1
(EX674750) JS5A581JG Draught stressed Fragaria vesca (strain... 54 0.019 1
(EX668755) JS3B282JG Heat stressed Fragaria vesca (strain Ha... 54 0.019 1
(EX644606) 256669387 Pea aphid whole body normalized full le... 54 0.019 1
(EH010157) USDA-FP_183283 Lysiphlebus testaceipes adult whol... 38 0.031 4
(AL132795) Human DNA sequence from clone RP3-412I7 on chromo... 40 0.056 5
(EE145288) SiJWB02CAH2 Lausanne fire ant library Solenopsis ... 52 0.073 1
(CX528414) s13dNF56B07AT061_517340 Aphid-Infected Shoots Med... 52 0.073 1
(CX525223) s13dNF20H04AT044_479080 Aphid-Infected Shoots Med... 52 0.073 1
(BJ361079) Dictyostelium discoideum cDNA clone:ddc9p18, 5' e... 50 0.087 2
(BP369858) Homo sapiens cDNA clone: TST03592, Sugano cDNA li... 46 0.090 2
(FE263195) CAZO3099.fwd CAZO Naegleria gruberi Flagellate St... 38 0.10 3
(EI018618) bb04a12.f Dekkera bruxellensis Random Genomic Lib... 46 0.10 2
(FE237495) CAPG4401.fwd CAPG Naegleria gruberi amoeba stage ... 38 0.11 3
(DR398918) TKN095E01_634692 Taraxacum kok-saghyz root cDNA l... 40 0.11 2
>(AC115684) Dictyostelium discoideum chromosome 2 map 3108975-3191114
strain AX4, complete sequence.
Length = 82139
Score = 2313 bits (1167), Expect(3) = 0.0
Identities = 1167/1167 (100%)
Strand = Plus / Minus
Query: 336 agattaaaaatttaccaggattagttacagcattaaattcaaacgatcaagcatatgttt 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71857 agattaaaaatttaccaggattagttacagcattaaattcaaacgatcaagcatatgttt 71798
Query: 396 attcatcattagtacaatttagaaagttattatcaattcatgcttatccaccaattgatc 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71797 attcatcattagtacaatttagaaagttattatcaattcatgcttatccaccaattgatc 71738
Query: 456 aagttattgaatgtggtattataccaaaattgaatcaactcttacaatgtaataatccaa 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71737 aagttattgaatgtggtattataccaaaattgaatcaactcttacaatgtaataatccaa 71678
Query: 516 aggtacaatttgaatcagcatgggcattgaccaatattgcatctggtaataatagacaaa 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71677 aggtacaatttgaatcagcatgggcattgaccaatattgcatctggtaataatagacaaa 71618
Query: 576 ctcaaactgtgatggaaagtggttccgtaccaatctttattcagttattatgtgcagaaa 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71617 ctcaaactgtgatggaaagtggttccgtaccaatctttattcagttattatgtgcagaaa 71558
Query: 636 ctaccgatgaagttaaggaacaatgtgcttgggcattgggtaatattgcaggtgatacag 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71557 ctaccgatgaagttaaggaacaatgtgcttgggcattgggtaatattgcaggtgatacag 71498
Query: 696 ttgattcaagaaactatctcttgaaatatggtgcaatgaatgctttaattccattgctac 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71497 ttgattcaagaaactatctcttgaaatatggtgcaatgaatgctttaattccattgctac 71438
Query: 756 actatggtgaagataatggtgccaccaccacctcagccaattccgagcgtaaaattggtc 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71437 actatggtgaagataatggtgccaccaccacctcagccaattccgagcgtaaaattggtc 71378
Query: 816 taattcaaaatgttgtctggacaatttcaaatttgtgtcgtggtaaaccacaaccagatt 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71377 taattcaaaatgttgtctggacaatttcaaatttgtgtcgtggtaaaccacaaccagatt 71318
Query: 876 tctctgtggttagtcaatgtttaccagcaatcaacgagttgatcagaattgaaaatcttc 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71317 tctctgtggttagtcaatgtttaccagcaatcaacgagttgatcagaattgaaaatcttc 71258
Query: 936 caagtgaaatctatggtgatttatgttgggcattatcttacctctgtgatggtccaaata 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71257 caagtgaaatctatggtgatttatgttgggcattatcttacctctgtgatggtccaaata 71198
Query: 996 caaagattcaagccgtcatcgatagtggtgtcgtaccaagattggtcaaactattggaat 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71197 caaagattcaagccgtcatcgatagtggtgtcgtaccaagattggtcaaactattggaat 71138
Query: 1056 atccagatagtatcgttttcacaccagcattacgtgccgttggtaatattgtcactggtg 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71137 atccagatagtatcgttttcacaccagcattacgtgccgttggtaatattgtcactggtg 71078
Query: 1116 aatctagccaaactcaaatagtcatcgataataatggtgttgaattgatcactcgtctct 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71077 aatctagccaaactcaaatagtcatcgataataatggtgttgaattgatcactcgtctct 71018
Query: 1176 tggccgttcaaaagaaatccattcgtaaagaatcatgttgggcattatcaaatatcaccg 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71017 tggccgttcaaaagaaatccattcgtaaagaatcatgttgggcattatcaaatatcaccg 70958
Query: 1236 ctggtgaaccatcacaaatcgatgttgtcgtatcaaatccaaagacagtgacaaccttga 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70957 ctggtgaaccatcacaaatcgatgttgtcgtatcaaatccaaagacagtgacaaccttga 70898
Query: 1296 tcagtcttctctcccacagtgaacatgacattaaacgtgaagcatgttgggctttatcaa 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70897 tcagtcttctctcccacagtgaacatgacattaaacgtgaagcatgttgggctttatcaa 70838
Query: 1356 actctaccaataattcatcaactaaatcaattcaaaccttggttcgtcacaatatcttga 1415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70837 actctaccaataattcatcaactaaatcaattcaaaccttggttcgtcacaatatcttga 70778
Query: 1416 aacattttatcgatttattaaactctcaagatttagttatccttaaaatcgtcttggaag 1475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70777 aacattttatcgatttattaaactctcaagatttagttatccttaaaatcgtcttggaag 70718
Query: 1476 gtttaatcaatatcattaaagaaggtg 1502
|||||||||||||||||||||||||||
Sbjct: 70717 gtttaatcaatatcattaaagaaggtg 70691
Score = 214 bits (108), Expect(3) = 0.0
Identities = 108/108 (100%)
Strand = Plus / Minus
Query: 1521 ctggtgttaatccatacgttaacttgatctctgaaatgcaaggtgaatccatcatttatg 1580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70672 ctggtgttaatccatacgttaacttgatctctgaaatgcaaggtgaatccatcatttatg 70613
Query: 1581 atcttcaagagcatcaatcaaaagatgtttacaagaaagctttcgaac 1628
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70612 atcttcaagagcatcaatcaaaagatgtttacaagaaagctttcgaac 70565
Score = 121 bits (61), Expect(3) = 0.0
Identities = 64/65 (98%)
Strand = Plus / Minus
Query: 1630 ttattgaattctttgaaagttcagattattcggattctgaaaattctgaaccaaatataa 1689
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 70564 ttattgaattctttgaaagttcagattattctgattctgaaaattctgaaccaaatataa 70505
Query: 1690 atcaa 1694
|||||
Sbjct: 70504 atcaa 70500
Score = 143 bits (72), Expect(5) = 1e-54
Identities = 72/72 (100%)
Strand = Plus / Minus
Query: 266 tatcaaattatcgttccaccagaagttcaagaacaattccaaaaatatgaaaatgaaact 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72091 tatcaaattatcgttccaccagaagttcaagaacaattccaaaaatatgaaaatgaaact 72032
Query: 326 atggaaaataag 337
||||||||||||
Sbjct: 72031 atggaaaataag 72020
Score = 99.6 bits (50), Expect(5) = 1e-54
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 206 ctcaattggtattagaaaaaatgctagagaagagttaatgttaaagagac 255
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72173 ctcaattggtattagaaaaaatgctagagaagagttaatgttaaagagac 72124
Score = 52.0 bits (26), Expect(5) = 1e-54
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 118 tgtcatcaagagataaacaagatagt 143
||||||||||||||||||||||||||
Sbjct: 72261 tgtcatcaagagataaacaagatagt 72236
Score = 30.2 bits (15), Expect(5) = 1e-54
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1210 atgttgggcattatc 1224
|||||||||||||||
Sbjct: 71235 atgttgggcattatc 71221
Score = 26.3 bits (13), Expect(5) = 1e-54
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 1446 atttagttatcct 1458
|||||||||||||
Sbjct: 46188 atttagttatcct 46176
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,612,012,567
Number of extensions: 90159023
Number of successful extensions: 6904949
Number of sequences better than 10.0: 265
Length of query: 1759
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1735
Effective length of database: 97,308,875,965
Effective search space: 168830899799275
Effective search space used: 168830899799275
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.30 |
| Homology vs Protein |
Query= Contig-U11647-1 (Contig-U11647-1Q) /CSM_Contig/Contig-U11647-1Q.Seq.d
(1759 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q76P29) RecName: Full=Importin subunit alpha-B; AltName: Full=K... 336 e-101
CP001576_328(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 342 e-100
BT063489_1(BT063489|pid:none) Zea mays full-length cDNA clone ZM... 351 e-100
EF153481_1(EF153481|pid:none) Brassica napus importin alpha-like... 341 7e-99
AB024311_1(AB024311|pid:none) Oryza sativa Japonica Group mRNA f... 343 2e-98
T52101(T52101) probable nuclear transport factor importin alpha-... 340 3e-98
AC003114_2(AC003114|pid:none) Arabidopsis thaliana chromosome 1 ... 339 4e-98
AF361811_1(AF361811|pid:none) Arabidopsis thaliana AT3g06720/F3E... 341 1e-97
CP000589_311(CP000589|pid:none) Ostreococcus lucimarinus CCE9901... 329 2e-97
(Q71VM4) RecName: Full=Importin subunit alpha-1a; &AB004660_1(A... 338 4e-97
AF369706_1(AF369706|pid:none) Capsicum annuum importin alpha 1 m... 336 5e-97
EF137253_1(EF137253|pid:none) Nicotiana benthamiana Impa1 mRNA, ... 335 7e-97
AF369707_1(AF369707|pid:none) Capsicum annuum importin alpha 2 m... 337 1e-96
AB236757_1(AB236757|pid:none) Trifolium pratense RNA for putativ... 336 3e-96
AF005265_1(AF005265|pid:none) Oryza sativa importin mRNA, comple... 335 3e-96
EF137254_1(EF137254|pid:none) Nicotiana benthamiana Impa2 mRNA, ... 334 8e-96
T52098(T52098) probable nuclear transport factor importin alpha ... 335 1e-95
(Q96321) RecName: Full=Importin subunit alpha-1; AltName: Full=K... 333 2e-95
T52102(T52102) probable nuclear transport factor importin alpha-... 332 2e-95
EU959766_1(EU959766|pid:none) Zea mays clone 219897 importin alp... 330 4e-95
AY054164_1(AY054164|pid:none) Arabidopsis thaliana AT3g06720/F3E... 331 5e-95
U69533_1(U69533|pid:none) Arabidopsis thaliana AtKAP alpha mRNA,... 330 1e-94
AE017344_469(AE017344|pid:none) Cryptococcus neoformans var. neo... 338 3e-94
AM432887_1(AM432887|pid:none) Vitis vinifera contig VV78X186549.... 327 2e-93
Y09511_1(Y09511|pid:none) A.thaliana mRNA for Kap alpha protein. 323 2e-92
(O04294) RecName: Full=Importin subunit alpha-2; AltName: Full=K... 323 2e-92
T52099(T52099) probable nuclear transport factor importin alpha ... 321 8e-92
BC072048_1(BC072048|pid:none) Xenopus laevis cDNA clone MGC:7891... 318 7e-91
AJ557449_1(AJ557449|pid:none) Xenopus laevis mRNA for importin a... 319 9e-91
EF144903_1(EF144903|pid:none) Populus trichocarpa clone WS01119_... 318 2e-90
(O94374) RecName: Full=Importin subunit alpha-2; AltName: Full=K... 326 2e-90
BC105813_1(BC105813|pid:none) Rattus norvegicus karyopherin alph... 319 6e-90
AY779030_1(AY779030|pid:none) Rattus norvegicus karyopherin alph... 319 6e-90
AK154882_1(AK154882|pid:none) Mus musculus NOD-derived CD11c +ve... 318 1e-89
AK301714_1(AK301714|pid:none) Homo sapiens cDNA FLJ53229 complet... 317 2e-89
A86157(A86157) probable importin alpha subunit [imported] - Arab... 312 3e-89
(Q60960) RecName: Full=Importin subunit alpha-1; AltName: Full=K... 312 8e-89
CR954209_344(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 315 1e-88
(P83953) RecName: Full=Importin subunit alpha-1; AltName: Full=K... 311 1e-88
AY779025_1(AY779025|pid:none) Rattus norvegicus karyopherin alph... 311 1e-88
(A2VE08) RecName: Full=Importin subunit alpha-1; AltName: Full=K... 312 2e-88
(Q5ZML1) RecName: Full=Importin subunit alpha-1; AltName: Full=K... 312 2e-88
BC063215_1(BC063215|pid:none) Xenopus tropicalis hypothetical pr... 306 5e-88
AY892277_1(AY892277|pid:none) Synthetic construct Homo sapiens c... 310 9e-88
DQ891406_1(DQ891406|pid:none) Synthetic construct clone IMAGE:10... 310 9e-88
AY267540_1(AY267540|pid:none) Toxoplasma gondii importin alpha m... 326 1e-87
AL132795_5(AL132795|pid:none) Human DNA sequence from clone RP3-... 308 2e-87
(O15131) RecName: Full=Importin subunit alpha-6; AltName: Full=K... 308 2e-87
(Q56R16) RecName: Full=Importin subunit alpha-6; AltName: Full=K... 307 6e-87
CR382132_1183(CR382132|pid:none) Yarrowia lipolytica strain CLIB... 312 2e-86
AM920436_197(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 313 3e-86
AB016872_20(AB016872|pid:none) Arabidopsis thaliana genomic DNA,... 306 8e-86
CR380956_492(CR380956|pid:none) Candida glabrata strain CBS138 c... 313 7e-85
FM992692_17(FM992692|pid:none) Candida dubliniensis CD36 chromos... 306 2e-84
(Q02821) RecName: Full=Importin subunit alpha; AltName: Full=Kar... 312 2e-84
(O14063) RecName: Full=Importin subunit alpha-1; AltName: Full=K... 307 3e-84
CU928166_301(CU928166|pid:none) Kluyveromyces thermotolerans str... 311 4e-84
CP000499_673(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 303 2e-83
L81172_1(L81172|pid:none) Arabidopsis thaliana importin alpha ho... 293 2e-83
CR382139_32(CR382139|pid:none) Debaryomyces hansenii strain CBS7... 303 3e-83
BC095356_1(BC095356|pid:none) Danio rerio zgc:110662, mRNA (cDNA... 310 1e-82
AE016815_61(AE016815|pid:none) Ashbya gossypii (= Eremothecium g... 306 1e-82
EF147992_1(EF147992|pid:none) Populus trichocarpa clone WS0126_I... 289 2e-82
CU640366_321(CU640366|pid:none) Podospora anserina genomic DNA c... 307 9e-82
AC151459_7(AC151459|pid:none) Medicago truncatula clone mth2-6e6... 306 1e-81
I59931(I59931) nucleoprotein interactor 1 - human &S75295_1(S75... 306 2e-81
AX021836_1(AX021836|pid:none) Sequence 10 from Patent EP0861322. 306 2e-81
FN392321_624(FN392321|pid:none) Pichia pastoris GS115 chromosome... 299 3e-81
CP000881_79(CP000881|pid:none) Hemiselmis andersenii chromosome ... 296 2e-78
CR940353_830(CR940353|pid:none) Theileria annulata strain Ankara... 296 2e-78
AE014296_3413(AE014296|pid:none) Drosophila melanogaster chromos... 294 6e-78
AC011620_1(AC011620|pid:none) Arabidopsis thaliana chromosome II... 281 1e-77
AL606727_2(AL606727|pid:none) Zebrafish DNA sequence from clone ... 278 3e-77
BT053085_1(BT053085|pid:none) Medicago truncatula clone MTYFL_FM... 272 3e-77
CR548612_33(CR548612|pid:none) Paramecium tetraurelia macronucle... 291 7e-77
(O35343) RecName: Full=Importin subunit alpha-4; AltName: Full=K... 274 1e-76
FJ754642_1(FJ754642|pid:none) Bos taurus importin alpha 3 mRNA, ... 274 1e-76
AJ719777_1(AJ719777|pid:none) Gallus gallus mRNA for hypothetica... 273 1e-76
(O00629) RecName: Full=Importin subunit alpha-4; AltName: Full=K... 273 2e-76
GQ166956_1(GQ166956|pid:none) Sus scrofa karyopherin alpha 2 mRN... 281 3e-76
BC053343_1(BC053343|pid:none) Homo sapiens karyopherin alpha 2 (... 282 4e-76
CR860871_1(CR860871|pid:none) Pongo abelii mRNA; cDNA DKFZp469C0... 281 4e-76
AB169177_1(AB169177|pid:none) Macaca fascicularis testis cDNA, c... 281 7e-76
AK291954_1(AK291954|pid:none) Homo sapiens cDNA FLJ78270 complet... 281 7e-76
AJ557447_1(AJ557447|pid:none) Xenopus laevis mRNA for importin a... 275 7e-76
AY892641_1(AY892641|pid:none) Synthetic construct Homo sapiens c... 281 9e-76
AY890158_1(AY890158|pid:none) Synthetic construct Homo sapiens c... 281 9e-76
(P52292) RecName: Full=Importin subunit alpha-2; AltName: Full=K... 281 9e-76
(P52293) RecName: Full=Importin subunit alpha-2; AltName: Full=K... 279 9e-76
AY779026_1(AY779026|pid:none) Rattus norvegicus karyopherin alph... 279 2e-75
BC170676_1(BC170676|pid:none) Xenopus tropicalis karyopherin (im... 273 2e-75
U12269_1(U12269|pid:none) Drosophila melanogaster pendulin (oho-... 286 2e-75
BC070983_1(BC070983|pid:none) Xenopus laevis hypothetical protei... 272 3e-75
G88733(G88733)protein F32E10.4 [imported] - Caenorhabditis elegans 276 3e-75
AY577009_1(AY577009|pid:none) Danio rerio clone RZ151A3F12 karyo... 269 3e-75
(O00505) RecName: Full=Importin subunit alpha-3; AltName: Full=K... 271 3e-75
(Q19969) RecName: Full=Importin subunit alpha-3; AltName: Full=K... 276 4e-75
BC055253_1(BC055253|pid:none) Danio rerio karyopherin (importin)... 280 4e-75
Y12394_1(Y12394|pid:none) H.sapiens mRNA for SRP1-like protein. 271 8e-75
AF034756_1(AF034756|pid:none) Homo sapiens importin-alpha homolo... 270 1e-74
S57873(S57873;S57343) pendulin - mouse &U12270_1(U12270|pid:none) 275 1e-74
AY391433_1(AY391433|pid:none) Danio rerio karyopherin alpha 3 (K... 278 2e-74
BC067848_1(BC067848|pid:none) Homo sapiens karyopherin alpha 2 (... 276 2e-74
BT058548_1(BT058548|pid:none) Salmo salar clone Contig1784 Impor... 275 8e-74
DQ443129_1(DQ443129|pid:none) Bombyx mori karyopherin alpha 3 mR... 270 8e-74
AJ719475_1(AJ719475|pid:none) Gallus gallus mRNA for hypothetica... 275 1e-73
B55194(B55194)importin 2 - African clawed frog 267 2e-73
(P52171) RecName: Full=Importin subunit alpha-2; AltName: Full=K... 267 2e-73
PDBN(1IAL)A MOL_ID: 1;MOL_ID: 1; MOLECULE: IMPORTIN ALPHA; MOLEC... 279 2e-73
BC080415_1(BC080415|pid:none) Xenopus laevis importin alpha 1b, ... 266 4e-73
AF176651_1(AF176651|pid:none) Tilapia nilotica pendulin mRNA, co... 275 1e-72
BC168046_1(BC168046|pid:none) Xenopus tropicalis cDNA clone MGC:... 266 1e-72
DQ072249_1(DQ072249|pid:none) Caenorhabditis remanei strain EM46... 276 2e-72
BC082280_1(BC082280|pid:none) Mus musculus karyopherin (importin... 275 5e-72
AF230871_1(AF230871|pid:none) Drosophila melanogaster clone gm01... 274 9e-72
AX021840_1(AX021840|pid:none) Sequence 14 from Patent EP0861322. 273 1e-71
BC097584_1(BC097584|pid:none) Xenopus laevis importin alpha 1a, ... 260 3e-71
AF074958_1(AF074958|pid:none) Drosophila melanogaster karyopheri... 272 3e-71
AE014297_1001(AE014297|pid:none) Drosophila melanogaster chromos... 272 3e-71
(P52170) RecName: Full=Importin subunit alpha-1; AltName: Full=K... 258 1e-70
FN317461_1(FN317461|pid:none) Schistosoma japonicum isolate Anhu... 260 7e-70
AY815930_1(AY815930|pid:none) Schistosoma japonicum SJCHGC09280 ... 260 7e-70
BC081368_1(BC081368|pid:none) Xenopus tropicalis MGC89911 protei... 267 8e-70
CR762026_1(CR762026|pid:none) Xenopus tropicalis finished cDNA, ... 266 2e-69
AJ557446_1(AJ557446|pid:none) Xenopus laevis mRNA for importin a... 264 7e-69
AF165818_122(AF165818|pid:none) Guillardia theta nucleomorph chr... 264 9e-69
AF005264_1(AF005264|pid:none) Hydra vulgaris importin alpha-3 su... 263 2e-68
AC084047_2(AC084047|pid:none) Trypanosoma brucei chromosome 6 cl... 258 4e-67
(A9QM74) RecName: Full=Importin subunit alpha-8; AltName: Full=K... 249 6e-66
AM502248_149(AM502248|pid:none) Leishmania infantum chromosome 30. 252 3e-65
AM494967_124(AM494967|pid:none) Leishmania braziliensis chromoso... 252 4e-65
CT005267_118(CT005267|pid:none) Leishmania major strain Friedlin... 251 6e-65
AB212971_1(AB212971|pid:none) Pagrus major imp alpha mRNA for im... 250 1e-64
FJ754641_1(FJ754641|pid:none) Bos taurus importin alpha 8 mRNA, ... 237 4e-62
AY815375_1(AY815375|pid:none) Schistosoma japonicum SJCHGC09414 ... 235 4e-60
FJ717332_1(FJ717332|pid:none) Mus musculus Kpna2-like protein tr... 223 3e-57
AY950703_1(AY950703|pid:none) Mus musculus importin alpha 2 mRNA... 223 3e-57
AB171040_1(AB171040|pid:none) Macaca fascicularis brain cDNA clo... 217 1e-56
AB015478_8(AB015478|pid:none) Arabidopsis thaliana genomic DNA, ... 222 3e-56
(P91276) RecName: Full=Importin subunit alpha-2; AltName: Full=K... 207 2e-54
AK128280_1(AK128280|pid:none) Homo sapiens cDNA FLJ46417 fis, cl... 215 4e-54
AK125626_1(AK125626|pid:none) Homo sapiens cDNA FLJ43638 fis, cl... 215 4e-54
AY136331_1(AY136331|pid:none) Arabidopsis thaliana unknown prote... 213 2e-53
FN357881_5(FN357881|pid:none) Schistosoma mansoni genome sequenc... 209 2e-52
EU965280_1(EU965280|pid:none) Zea mays clone 285016 importin alp... 208 4e-52
BT016073_1(BT016073|pid:none) Drosophila melanogaster LP05312 fu... 199 4e-49
AC146571_10(AC146571|pid:none) Medicago truncatula clone mth2-10... 196 2e-48
AF421152_1(AF421152|pid:none) Sus scrofa karyopherin alpha 5 mRN... 182 3e-44
AL590450_176(AL590450|pid:none) chromosome XI of strain GB-M1 of... 177 1e-42
AY010069_1(AY010069|pid:none) Sus scrofa karyopherin alpha 3 (Kp... 152 4e-35
FJ869850_1(FJ869850|pid:none) Arabidopsis thaliana importin alph... 151 6e-35
DQ447055_1(DQ447055|pid:none) Arabidopsis thaliana clone pENTR22... 147 2e-34
EU956564_1(EU956564|pid:none) Zea mays clone 1566440 importin al... 141 7e-32
EU953245_1(EU953245|pid:none) Zea mays clone 1393469 unknown mRNA. 140 1e-31
AY010065_1(AY010065|pid:none) Sus scrofa karyopherin alpha 2 (Kp... 129 1e-30
D78504_1(D78504|pid:none) Oryza sativa Japonica Group mRNA, simi... 134 1e-29
BT041626_1(BT041626|pid:none) Zea mays full-length cDNA clone ZM... 134 1e-29
(Q9FYP9) RecName: Full=Importin subunit alpha-2; &AB006788_1(AB... 132 5e-29
AL163002_10(AL163002|pid:none) Arabidopsis thaliana DNA chromoso... 124 8e-27
AM487333_1(AM487333|pid:none) Vitis vinifera contig VV78X188158.... 121 9e-26
AY010067_1(AY010067|pid:none) Sus scrofa karyopherin alpha 4 (Kp... 120 2e-25
DQ417148_1(DQ417148|pid:none) Ictalurus punctatus clone SBBG06R ... 111 2e-25
AB027972_1(AB027972|pid:none) Schizosaccharomyces pombe gene for... 110 3e-25
AM451956_1(AM451956|pid:none) Vitis vinifera contig VV78X243751.... 116 2e-24
AE014296_1106(AE014296|pid:none) Drosophila melanogaster chromos... 115 4e-24
AL593847_7(AL593847|pid:none) Mouse DNA sequence from clone RP23... 79 7e-16
T22534(T22534)hypothetical protein F53B2.5 - Caenorhabditis eleg... 82 8e-14
AL593847_8(AL593847|pid:none) Mouse DNA sequence from clone RP23... 70 3e-13
BT053099_1(BT053099|pid:none) Medicago truncatula clone MTYFL_FM... 50 7e-11
CP001334_45(CP001334|pid:none) Micromonas sp. RCC299 chromosome ... 70 3e-10
U40057_1(U40057|pid:none) Chlamydomonas reinhardtii flagellar ce... 69 7e-10
BT035577_1(BT035577|pid:none) Zea mays full-length cDNA clone ZM... 66 4e-09
BC088916_1(BC088916|pid:none) Xenopus laevis hippocalcin, mRNA (... 64 2e-08
AK007053_1(AK007053|pid:none) Mus musculus adult male testis cDN... 63 4e-08
AY010068_1(AY010068|pid:none) Sus scrofa karyopherin alpha 6 (Kp... 62 5e-08
EF575595_1(EF575595|pid:none) Anas platyrhynchos axoneme central... 62 9e-08
AK132882_1(AK132882|pid:none) Mus musculus adult male testis cDN... 61 1e-07
EF575599_1(EF575599|pid:none) Meleagris gallopavo axoneme centra... 61 1e-07
EF575598_1(EF575598|pid:none) Coturnix coturnix axoneme central ... 60 3e-07
(Q6CX49) RecName: Full=Vacuolar protein 8; &CR382121_469(CR3821... 59 7e-07
AB079614_1(AB079614|pid:none) Ciona intestinalis mRNA for pf16 p... 59 7e-07
BC074072_1(BC074072|pid:none) Danio rerio sperm associated antig... 59 7e-07
EF575597_1(EF575597|pid:none) Columba livia axoneme central appa... 57 2e-06
AB169228_1(AB169228|pid:none) Macaca fascicularis testis cDNA, c... 57 2e-06
BC109758_1(BC109758|pid:none) Bos taurus sperm associated antige... 57 2e-06
AK302194_1(AK302194|pid:none) Homo sapiens cDNA FLJ60368 complet... 56 4e-06
CR860305_1(CR860305|pid:none) Pongo abelii mRNA; cDNA DKFZp459D0... 56 4e-06
(O75602) RecName: Full=Sperm-associated antigen 6; AltName: Full... 56 4e-06
AL158211_13(AL158211|pid:none) Human DNA sequence from clone RP1... 56 4e-06
CT005259_141(CT005259|pid:none) Leishmania major strain Friedlin... 56 5e-06
CR533552_1(CR533552|pid:none) Homo sapiens full open reading fra... 55 1e-05
AM502238_146(AM502238|pid:none) Leishmania infantum chromosome 20. 54 1e-05
DQ894067_1(DQ894067|pid:none) Synthetic construct Homo sapiens c... 54 2e-05
BC145253_1(BC145253|pid:none) Mus musculus ankyrin and armadillo... 53 3e-05
(A2RT91) RecName: Full=Ankyrin and armadillo repeat-containing p... 53 3e-05
FJ394348_1(FJ394348|pid:none) Hordeum vulgare subsp. spontaneum ... 53 4e-05
AK317640_1(AK317640|pid:none) Arabidopsis thaliana AT5G19330 mRN... 53 4e-05
FJ263913_1(FJ263913|pid:none) Artemia franciscana clone 15NB4.08... 53 4e-05
FN357917_10(FN357917|pid:none) Schistosoma mansoni genome sequen... 52 9e-05
AY074524_1(AY074524|pid:none) Arabidopsis thaliana unknown prote... 52 9e-05
FJ422582_1(FJ422582|pid:none) Arabidopsis thaliana ABAP1 (ABAP1)... 52 9e-05
AM989984_51(AM989984|pid:none) Zygosaccharomyces rouxii strain C... 50 2e-04
(O43028) RecName: Full=Vacuolar protein 8; &AL022071_14(AL02207... 50 2e-04
FJ394352_1(FJ394352|pid:none) Secale cereale putative importin a... 49 5e-04
(Q22560) RecName: Full=Importin subunit alpha-1; AltName: Full=K... 49 6e-04
BT053827_1(BT053827|pid:none) Zea mays full-length cDNA clone ZM... 49 6e-04
(Q6FJV1) RecName: Full=Vacuolar protein 8; &CR380959_145(CR3809... 49 6e-04
CP001328_402(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 49 8e-04
T38423(T38423)hypothetical protein SPAC26H5.04 - fission yeast ... 48 0.001
(Q7Z5J8) RecName: Full=Ankyrin and armadillo repeat-containing p... 48 0.001
BC161230_1(BC161230|pid:none) Xenopus tropicalis hypothetical pr... 48 0.001
CP001333_143(CP001333|pid:none) Micromonas sp. RCC299 chromosome... 47 0.002
AM910991_284(AM910991|pid:none) Plasmodium knowlesi strain H chr... 47 0.002
AL132795_7(AL132795|pid:none) Human DNA sequence from clone RP3-... 47 0.002
EF107732_1(EF107732|pid:none) Pichia angusta Vac8p (vac8) gene, ... 47 0.003
FN357857_2(FN357857|pid:none) Schistosoma mansoni genome sequenc... 46 0.004
BC067323_1(BC067323|pid:none) Xenopus tropicalis armadillo repea... 45 0.006
CP000595_138(CP000595|pid:none) Ostreococcus lucimarinus CCE9901... 45 0.006
DQ407882_1(DQ407882|pid:none) Ictalurus punctatus clone SDDF06R ... 45 0.006
FM992691_454(FM992691|pid:none) Candida dubliniensis CD36 chromo... 45 0.006
(Q59MN0) RecName: Full=Vacuolar protein 8; 45 0.006
AE017341_348(AE017341|pid:none) Cryptococcus neoformans var. neo... 45 0.008
(Q5KPA7) RecName: Full=Vacuolar protein 8; 45 0.008
(Q2U5T5) RecName: Full=Vacuolar protein 8; &AP007166_440(AP0071... 45 0.011
AM477505_6(AM477505|pid:none) Vitis vinifera contig VV78X063132.... 45 0.011
(Q9SNC6) RecName: Full=U-box domain-containing protein 13; ... 45 0.011
BC139553_1(BC139553|pid:none) Danio rerio zgc:162240, mRNA (cDNA... 44 0.014
AM454284_1(AM454284|pid:none) Vitis vinifera contig VV78X257465.... 44 0.019
BT044597_1(BT044597|pid:none) Drosophila melanogaster RE55335 fu... 44 0.025
AE013599_13(AE013599|pid:none) Drosophila melanogaster chromosom... 44 0.025
AE013599_14(AE013599|pid:none) Drosophila melanogaster chromosom... 44 0.025
(Q2GW27) RecName: Full=Vacuolar protein 8; 43 0.032
(Q4I1B1) RecName: Full=Vacuolar protein 8; 43 0.032
U34814_1(U34814|pid:none) Lytechinus variegatus beta-catenin mRN... 43 0.032
AM422113_1(AM422113|pid:none) Danio rerio partial mRNA for impor... 43 0.042
AK083094_1(AK083094|pid:none) Mus musculus adult male hippocampu... 43 0.042
AC036106_1(AC036106|pid:none) Arabidopsis thaliana chromosome 3 ... 42 0.055
(O13986) RecName: Full=Uncharacterized protein C26H5.04; &CU329... 42 0.055
BC044907_1(BC044907|pid:none) Homo sapiens ankyrin and armadillo... 42 0.055
AY243535_1(AY243535|pid:none) Homo sapiens gamma-catenin mRNA, c... 42 0.094
(Q8SPJ1) RecName: Full=Junction plakoglobin; AltName: Full=Desmo... 42 0.094
BC168192_1(BC168192|pid:none) Rattus norvegicus armadillo repeat... 42 0.094
BC118114_1(BC118114|pid:none) Bos taurus junction plakoglobin, m... 42 0.094
T26395(T26395)hypothetical protein Y105C5B.s - Caenorhabditis el... 42 0.094
(P14923) RecName: Full=Junction plakoglobin; AltName: Full=Desmo... 42 0.094
(Q9CAG5) RecName: Full=U-box domain-containing protein 7; ... 41 0.12
CT025911_2(CT025911|pid:none) Zebrafish DNA sequence from clone ... 41 0.12
AJ719848_1(AJ719848|pid:none) Gallus gallus mRNA for hypothetica... 41 0.12
AY069321_1(AY069321|pid:none) Drosophila melanogaster LD03740 fu... 41 0.12
AL135901_8(AL135901|pid:none) Human DNA sequence from clone RP11... 41 0.16
AB120428_1(AB120428|pid:none) Branchiostoma belcheri b-cat mRNA ... 41 0.16
(Q02257) RecName: Full=Junction plakoglobin; AltName: Full=Desmo... 40 0.21
BC134432_1(BC134432|pid:none) Bos taurus plakophilin 2, mRNA (cD... 40 0.21
EU939737_1(EU939737|pid:none) Saccoglossus kowalevskii beta-cate... 40 0.21
M90365_1(M90365|pid:none) Mus musculus plakoglobin mRNA, partial... 40 0.21
BC166835_1(BC166835|pid:none) Rattus norvegicus transmembrane an... 40 0.21
AM920427_865(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 40 0.21
U52351_1(U52351|pid:none) Homo sapiens arm-repeat protein NPRAP/... 40 0.27
GM037208_1(GM037208|pid:none) Sequence 5 from Patent WO2008043826. 40 0.27
(Q2KI54) RecName: Full=Armadillo repeat-containing protein 8; &... 40 0.27
BC041699_1(BC041699|pid:none) Homo sapiens armadillo repeat cont... 40 0.27
AK299300_1(AK299300|pid:none) Homo sapiens cDNA FLJ56233 complet... 40 0.27
AF161541_1(AF161541|pid:none) Homo sapiens HSPC056 mRNA, complet... 40 0.27
CU928173_528(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 40 0.27
(Q5R6S3) RecName: Full=Armadillo repeat-containing protein 8; &... 40 0.27
AK296837_1(AK296837|pid:none) Homo sapiens cDNA FLJ55707 complet... 40 0.27
AB171204_1(AB171204|pid:none) Macaca fascicularis brain cDNA clo... 40 0.27
AC132492_6(AC132492|pid:none) Oryza sativa (japonica cultivar-gr... 40 0.27
(Q5VQ09) RecName: Full=Armadillo repeat-containing kinesin-like ... 40 0.27
AP008207_3285(AP008207|pid:none) Oryza sativa (japonica cultivar... 40 0.27
BC032661_1(BC032661|pid:none) Homo sapiens armadillo repeat cont... 40 0.27
BC068279_1(BC068279|pid:none) Mus musculus plakophilin 2, mRNA (... 40 0.36
AK167660_1(AK167660|pid:none) Mus musculus 12 days pregnant adul... 40 0.36
AM270241_49(AM270241|pid:none) Aspergillus niger contig An11c024... 40 0.36
BC086288_1(BC086288|pid:none) Xenopus laevis hypothetical LOC495... 40 0.36
BC046728_1(BC046728|pid:none) Xenopus laevis hypothetical protei... 40 0.36
AM480510_1(AM480510|pid:none) Vitis vinifera contig VV78X089321.... 40 0.36
BC108614_1(BC108614|pid:none) Xenopus laevis hypothetical protei... 39 0.47
AB169885_1(AB169885|pid:none) Macaca fascicularis brain cDNA, cl... 39 0.47
AP004667_6(AP004667|pid:none) Oryza sativa Japonica Group genomi... 39 0.47
AE016816_19(AE016816|pid:none) Ashbya gossypii (= Eremothecium g... 39 0.47
AK299769_1(AK299769|pid:none) Homo sapiens cDNA FLJ53383 complet... 39 0.47
JC4835(JC4835) beta-catenin - Hydra magnipapillata &U36781_1(U3... 39 0.47
AM487076_2(AM487076|pid:none) Vitis vinifera contig VV78X188132.... 39 0.61
(O93614) RecName: Full=Rap1 GTPase-GDP dissociation stimulator 1... 39 0.61
BC071013_1(BC071013|pid:none) Xenopus laevis hypothetical protei... 39 0.61
JE0358(JE0358)ralB binding protein - clawed frog 39 0.61
AE014187_538(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.61
AC148764_18(AC148764|pid:none) Medicago truncatula clone mth2-30... 39 0.61
AK117432_1(AK117432|pid:none) Arabidopsis thaliana At4g36030 mRN... 39 0.61
DQ013259_1(DQ013259|pid:none) Branchiostoma floridae beta-cateni... 39 0.61
U38624_1(U38624|pid:none) Hydra vulgaris beta-catenin mRNA, comp... 39 0.61
BC088583_1(BC088583|pid:none) Xenopus tropicalis armadillo repea... 39 0.61
BC114243_1(BC114243|pid:none) Danio rerio ankyrin and armadillo ... 39 0.61
CP000393_3940(CP000393|pid:none) Trichodesmium erythraeum IMS101... 39 0.61
M23410_1(M23410|pid:none) Human plakoglobin (PLAK) mRNA, complet... 39 0.79
A32905(A32905)plakoglobin, desmosomal - human 39 0.79
BT054880_1(BT054880|pid:none) Zea mays full-length cDNA clone ZM... 39 0.79
EU082825_1(EU082825|pid:none) Schmidtea mediterranea beta-cateni... 39 0.79
FJ883473_1(FJ883473|pid:none) Physcomitrella patens physcodillo-... 38 1.0
CP000855_1944(CP000855|pid:none) Thermococcus onnurineus NA1, co... 38 1.0
AC009273_25(AC009273|pid:none) Sequence of BAC T1N6 from Arabido... 38 1.0
AY059739_1(AY059739|pid:none) Arabidopsis thaliana unknown prote... 38 1.0
AX885720_1(AX885720|pid:none) Sequence 1583 from Patent EP1033401. 38 1.4
S35092(S35092)plakoglobin - mouse (fragment) 38 1.4
(P30998) RecName: Full=Junction plakoglobin; AltName: Full=Desmo... 38 1.4
DQ869570_1(DQ869570|pid:none) Podocoryne carnea beta-catenin mRN... 38 1.4
AC121235_12(AC121235|pid:none) Medicago truncatula clone mth2-21... 38 1.4
BC145217_1(BC145217|pid:none) Mus musculus catenin (cadherin ass... 38 1.4
AE014186_299(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 38 1.4
FB813779_1(FB813779|pid:none) Sequence 33052 from Patent WO20080... 38 1.4
AK228965_1(AK228965|pid:none) Arabidopsis thaliana mRNA for hypo... 37 1.8
D28476_1(D28476|pid:none) Homo sapiens KIAA0045 mRNA, partial cds. 37 1.8
BC114556_1(BC114556|pid:none) Homo sapiens thyroid hormone recep... 37 1.8
FB813773_1(FB813773|pid:none) Sequence 33046 from Patent WO20080... 37 1.8
FN357394_28(FN357394|pid:none) Schistosoma mansoni genome sequen... 37 1.8
BC100624_1(BC100624|pid:none) Rattus norvegicus thyroid hormone ... 37 1.8
(Q9C7G1) RecName: Full=U-box domain-containing protein 45; ... 37 1.8
AK158807_1(AK158807|pid:none) Mus musculus visual cortex cDNA, R... 37 1.8
BC113891_1(BC113891|pid:none) Homo sapiens thyroid hormone recep... 37 1.8
AK001721_1(AK001721|pid:none) Homo sapiens cDNA FLJ10859 fis, cl... 37 2.3
AP008218_52(AP008218|pid:none) Oryza sativa (japonica cultivar-g... 37 2.3
(O80742) RecName: Full=U-box domain-containing protein 19; ... 37 2.3
AY491431_1(AY491431|pid:none) Oryza sativa (japonica cultivar-gr... 37 2.3
AM484866_3(AM484866|pid:none) Vitis vinifera contig VV78X193876.... 37 2.3
BT033829_1(BT033829|pid:none) Zea mays full-length cDNA clone ZM... 37 3.0
EU963812_1(EU963812|pid:none) Zea mays clone 272947 unknown mRNA. 37 3.0
AP008209_2460(AP008209|pid:none) Oryza sativa (japonica cultivar... 37 3.0
AP008209_827(AP008209|pid:none) Oryza sativa (japonica cultivar-... 37 3.0
AP005391_14(AP005391|pid:none) Oryza sativa Japonica Group genom... 37 3.0
CR380953_40(CR380953|pid:none) Candida glabrata strain CBS138 ch... 37 3.0
BC158097_1(BC158097|pid:none) Mus musculus armadillo repeat cont... 37 3.0
FN318363_1(FN318363|pid:none) Schistosoma japonicum isolate Anhu... 37 3.0
(Q08DQ0) RecName: Full=Plakophilin-3; &BC123626_1(BC123626|pid:... 37 3.0
FB813741_1(FB813741|pid:none) Sequence 33014 from Patent WO20080... 37 3.0
AC146936_30(AC146936|pid:none) Oryza sativa (japonica cultivar-g... 37 3.0
AC103891_15(AC103891|pid:none) Oryza sativa (japonica cultivar-g... 37 3.0
CP001287_3571(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 36 3.9
(Q9FZ06) RecName: Full=Armadillo repeat-containing kinesin-like ... 36 3.9
AC025416_15(AC025416|pid:none) Genomic sequence for Arabidopsis ... 36 3.9
BC166201_1(BC166201|pid:none) Xenopus tropicalis hypothetical pr... 36 3.9
AL035540_17(AL035540|pid:none) Arabidopsis thaliana DNA chromoso... 36 3.9
AC138171_1(AC138171|pid:none) Medicago truncatula clone mth2-7f1... 36 3.9
BC168042_1(BC168042|pid:none) Xenopus tropicalis cDNA clone MGC:... 36 3.9
(Q6WWW4) RecName: Full=E3 ubiquitin-protein ligase UPL3; ... 36 3.9
AY312235_4(AY312235|pid:none) Streptococcus thermophilus plasmid... 36 3.9
AC074228_6(AC074228|pid:none) Arabidopsis thaliana chromosome 1 ... 36 3.9
AJ242478_4(AJ242478|pid:none) Streptococcus thermophilus pER1-2 ... 36 3.9
BC116608_1(BC116608|pid:none) Danio rerio zgc:136656, mRNA (cDNA... 36 5.2
BC068967_1(BC068967|pid:none) Xenopus laevis hypothetical protei... 36 5.2
EU956712_1(EU956712|pid:none) Zea mays clone 1571354 spotted lea... 36 5.2
AB171387_1(AB171387|pid:none) Macaca fascicularis brain cDNA clo... 36 5.2
AB120624_1(AB120624|pid:none) Achaearanea tepidariorum arm mRNA ... 36 5.2
AM436462_1(AM436462|pid:none) Vitis vinifera contig VV78X028296.... 36 5.2
AL158211_15(AL158211|pid:none) Human DNA sequence from clone RP1... 36 5.2
AK001882_1(AK001882|pid:none) Homo sapiens cDNA FLJ11020 fis, cl... 35 6.7
BC112707_1(BC112707|pid:none) Bos taurus RAP1, GTP-GDP dissociat... 35 6.7
BC039312_1(BC039312|pid:none) Homo sapiens armadillo repeat cont... 35 6.7
BC092360_1(BC092360|pid:none) Danio rerio zgc:136656, mRNA (cDNA... 35 6.7
EU972074_1(EU972074|pid:none) Zea mays clone 374472 armadillo/be... 35 6.7
(Q8BQX5) RecName: Full=Transmembrane and coiled-coil domain-cont... 35 6.7
(Q04173) RecName: Full=Rap1 GTPase-GDP dissociation stimulator 1... 35 6.7
AK302104_1(AK302104|pid:none) Homo sapiens cDNA FLJ55433 complet... 35 6.7
BC099845_1(BC099845|pid:none) Homo sapiens RAP1, GTP-GDP dissoci... 35 6.7
EU726765_1(EU726765|pid:none) Parhyale hawaiensis beta-catenin m... 35 6.7
CT978603_1951(CT978603|pid:none) Synechococcus sp. RCC307 genomi... 35 6.7
(Q0WUF6) RecName: Full=U-box domain-containing protein 41; ... 35 8.8
BC011279_1(BC011279|pid:none) Mus musculus RAP1, GTP-GDP dissoci... 35 8.8
AB015469_16(AB015469|pid:none) Arabidopsis thaliana genomic DNA,... 35 8.8
AK052125_1(AK052125|pid:none) Mus musculus 12 days embryo eyebal... 35 8.8
AK299229_1(AK299229|pid:none) Homo sapiens cDNA FLJ56232 complet... 35 8.8
AF136719_1(AF136719|pid:none) Mus musculus plakophilin-3 (Pkp3) ... 35 8.8
FB802525_1(FB802525|pid:none) Sequence 21798 from Patent WO20080... 35 8.8
AY128369_1(AY128369|pid:none) Arabidopsis thaliana putative prot... 35 8.8
BC106141_1(BC106141|pid:none) Mus musculus plakophilin 3, mRNA (... 35 8.8
(Q9FL17) RecName: Full=U-box domain-containing protein 40; ... 35 8.8
EU289289_1(EU289289|pid:none) Parhyale hawaiensis beta-catenin m... 35 8.8
(Q9QY23) RecName: Full=Plakophilin-3; &BC139775_1(BC139775|pid:... 35 8.8
A90477(A90477) hypothetical protein SSO2967 [imported] - Sulfolo... 35 8.8
>(Q76P29) RecName: Full=Importin subunit alpha-B; AltName:
Full=Karyopherin subunit alpha-B;
&AC116920_10(AC116920|pid:none)
Length = 516
Score = 336 bits (861), Expect(2) = e-101
Identities = 182/432 (42%), Positives = 266/432 (61%), Gaps = 1/432 (0%)
Frame = +2
Query: 326 MENKIKNLPGLVTALNSNDQAYVYSSLVQFRKLLSIHAYPPIDQVIECGIIPKLNQLLQC 505
+ +++ LP LV +NS + + S FRKLLSI PPI++VI+ GI+P+L + L
Sbjct: 62 INQRLEQLPSLVAEINSENPDLILKSTTAFRKLLSIEKSPPIEEVIKTGIVPRLVKFLYM 121
Query: 506 NN-PKVQFESAWALTNIASGNNRQTQTVMESGSVPIFIQLLCAETTDEVKEQCAWALGNI 682
+ P++QFE+AWALTNIASG QT+ V+E+G++ +F+ LL + D+V+EQ WALGNI
Sbjct: 122 QDFPQLQFEAAWALTNIASGTPEQTRVVIENGAIQVFV-LLLSSPHDDVREQAVWALGNI 180
Query: 683 AGDTVDSRNYLLKYGAMNALIPLLHYGEDNGATTTSANSERKIGLIQNVVWTISNLCRGK 862
AGD+ R+ +L + NAL PLL ++ A K+ +++N WT+SN CRGK
Sbjct: 181 AGDSHYCRDLVLSH---NALPPLLSLLQNPAAI--------KVSMVRNATWTLSNFCRGK 229
Query: 863 PQPDFSVVSQCLPAINELIRIENLPSEIYGDLCWALSYLCDGPNTKIQAVIDSGVVPRLV 1042
PQP F +V LP + +LI ++ E+ D CWALSYL DG N +IQ VID+ V ++V
Sbjct: 230 PQPPFEIVRASLPVLAKLIYYQD--EEVLIDACWALSYLSDGSNERIQEVIDAKVCRKMV 287
Query: 1043 KLLEYPDSIVFTPALRAVGNIVTGESSQTQIVIDNNGVELITRLLAVQKKSIRKESCWAL 1222
+LL +P V TPALR +GNIVTG+ +QTQIV+ + + LL K++IRKE+CW +
Sbjct: 288 ELLGHPTIAVQTPALRTIGNIVTGDDNQTQIVLSVQALSHLLNLLQSPKRAIRKEACWTI 347
Query: 1223 SNITAGEPSQIDVVVSNPKTVTTLISLLSHSEHDIKREACWALXXXXXXXXXXXIQTLVR 1402
SNITAG+ +QI V+ + + +L+ LL+++E +I++EA WA+ I LV
Sbjct: 348 SNITAGDKNQIQQVI-DANIIPSLVYLLANAEFEIQKEAAWAISNATSCGTPQQIHFLVS 406
Query: 1403 HNILKHFIDLLNSQDLVILKIVLEGLINIIXXXXXXXXXXXVNPYVNLISEMQGESIIYD 1582
+K DLL D I+ + LEG+ NI+ VNPY +I + G IYD
Sbjct: 407 QGCVKPLCDLLKVSDPRIINVALEGIENILVAGKKEAQVTGVNPYKKIIEDADGLGKIYD 466
Query: 1583 LQEHQSKDVYKK 1618
LQ H +KD ++K
Sbjct: 467 LQHHMNKDTFEK 478
Score = 58.5 bits (140), Expect(2) = e-101
Identities = 26/43 (60%), Positives = 36/43 (83%)
Frame = +3
Query: 126 RDKQDSRKKEFKKSLDSETARRKREENSIGIRKNAREELMLKR 254
R KQ++RK ++KKS+DS+ +RRKREE S+ IRKN REE +LK+
Sbjct: 3 RSKQETRKSQYKKSIDSDESRRKREEASLSIRKNKREESLLKK 45
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,560,078,678
Number of extensions: 49844524
Number of successful extensions: 123877
Number of sequences better than 10.0: 379
Number of HSP's gapped: 120564
Number of HSP's successfully gapped: 658
Length of query: 586
Length of database: 1,051,180,864
Length adjustment: 134
Effective length of query: 452
Effective length of database: 617,481,958
Effective search space: 279101845016
Effective search space used: 279101845016
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
10 |
| SL (DIR, L) |
2 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
8 |
| CH (FL, L) |
2 |
| CF (FL, S) |
2 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |