>Contig-U11622-1 (Contig-U11622-1Q) /CSM_Contig/Contig-U11622-1Q.Seq.d
AAAACTTTTAGATTCAATTTATTTATTTATTTATTTATTTATTTATTTAT
TCATTTTAAAAAAACTATTATTAATTATATAAAACTAGAAAACTTAAAAA
TATGAAATCTTTTGGAGCAAAACTAAAAGGATTAGTAAGCTCTGGTCCAA
GCTCAGTTGATTTAAACTTTGAAACAGCAAGAAAAGAATATACAACACTC
AATGAAACTATTACTAAAACCTATGAATCTTTATTAAAACATGATAAAAA
TTTACAAAAAACCTTTATTCATCCAAGTAGTTTGAATAAGAATGTTCAAA
AATATTTCCCATCTTCACATCCACTTACTCAATATACAACTGAAGTAAAT
AAAACTATAGAAGCAAGTTTTAATGAATGGACTCAAAGTCAAAAAGCAAA
TTATGATTATATTCAACAATATTTAGCAAGATCTAAATTTATTAAAGATG
CAATTTCTGATAGAGATAAATTATTGGAAGAAGTTGATAAGAGTGCATCA
AAGATAAAATCATTAAAAGAGAAACCATCAAAAGAAATTCATAAATTACA
ACAAGAACAAAACAATTACAATGCAAAGAGAGAATCATTTATAATTGCCA
ATCAAAAGGCATTATCTGATATATCTCAATTCTTTGAG----------CC
AGTAATTGAATTTTTAGGTCAATCTACAACTATTCCATCTATAGATGATT
CTCCTGTATCAAGTAATCCAAGTAGTGGTAGTAGTGGAGGTTTAAATAAT
AATGTTACTAATAATGTTCAAAGACCATCACCACCTCAATCAAATGGCGC
TCCACCACCACGTCCAGTTTCTTCAGCTCCACAACCATATCAACCACAAC
CACAACAAGTTGGAAGTTACCANCAACCAAATCAATATCANCAACCATCA
CCACCACAACAACAACAATATGGGGAATATGAACAACAACAACCACCACA
ACAACAATATAGACCACCACAACCACTTCGTCAACCATCACCACCAAGAC
CTGTTGGTGGTATACCTTCTCCATTTGGTAAACCACCAGGTGGTGCTGCC
CCACAACAATATCAACCACCACAACAATATGCACCACCACAACAATACCA
ACCACCACAACAATATGCACCACCACAACAACAACAACAACAGCAAGCAC
CACCTCGTCCAGTATCATCAACATTTAAACAAGGTCCAACCTATCCAGTA
CCAAAACCAGCAGGTGGCGTACCACAACCATCACAACAACAAATGAATCA
AATGGGTGGTTTTGCATTAAATGCTGCAAGAAATCCTGCTGTACAACAAG
GTGCTATGAATGCTGCTAGAAATTCCTGCTGTACAACAAGGTGCAACAAA
T

est1=CFK267F,-7,638
est2=VSH474F,9,377
est3=VSH474Z,9,365
est4=CHD416F,53,638
est5=CHD416Z,639,1206
est6=AFF181Z,1048,1342
est7=CFK267Z,1092,1211

nf*iqfiylfiylfiysf*knyy*LYKTRKLKNMKSFGAKLKGLVSSGPSSVDLNFETAR
KEYTTLNETITKTYESLLKHDKNLQKTFIHPSSLNKNVQKYFPSSHPLTQYTTEVNKTIE
ASFNEWTQSQKANYDYIQQYLARSKFIKDAISDRDKLLEEVDKSASKIKSLKEKPSKEIH
KLQQEQNNYNAKRESFIIANQKALSDISQFFE---

---PVIEFLGQSTTIPSIDDSPVSSNPSSGSSGGLNNNVTNNVQRPSPPQSNGAPPPRPV
SSAPQPYQPQPQQVGSYXQPNQYXQPSPPQQQQYGEYEQQQPPQQQYRPPQPLRQPSPPR
PVGGIPSPFGKPPGGAAPQQYQPPQQYAPPQQYQPPQQYAPPQQQQQQQAPPRPVSSTFK
QGPTYPVPKPAGGVPQPSQQQMNQMGGFALNAARNPAVQQGAMNAARNSCCTTRCNK

Frame A:
ktfrfnlfiylfiylfihfkktiinyiklenlki*nlleqn*kd**alvqaqli*tlkqq
ekniqhsmklllkpmnly*nmikiykkplfiqvv*irmfknishlhihllniqlk*ikl*
kqvlmnglkvkkqimiifnni*qdlnllkmqflieinywkklirvhqr*nh*krnhqkkf
inynknktitmqrenhl*lpikrhyliylnsl---

---PVIEFLGQSTTIPSIDDSPVSSNPSSGSSGGLNNNVTNNVQRPSPPQSNGAPPPRPV
SSAPQPYQPQPQQVGSYXQPNQYXQPSPPQQQQYGEYEQQQPPQQQYRPPQPLRQPSPPR
PVGGIPSPFGKPPGGAAPQQYQPPQQYAPPQQYQPPQQYAPPQQQQQQQAPPRPVSSTFK
QGPTYPVPKPAGGVPQPSQQQMNQMGGFALNAARNPAVQQGAMNAARNSCCTTRCNK

Frame B:
klldsiylfiylfiylfilkklllii*n*kt*kyeifwsktkrisklwskls*fkl*nsk
kriyntq*nyy*nl*ifikt**kftknlyssk*fe*ecskifpiftstysiyn*sk*nyr
skf**mdskskskl*lystifski*iy*rcnf**r*iigrs**ecikdkiikretikrns
*ittrtkqlqckeriiyncqskgii*yisil*---

---q*lnf*vnlqlfhl*millyqviqvvvvvev*iimllimfkdhhhlnqmalhhhvqf
lqlhnhinhnhnklevtxnqinixnhhhhnnnnmgnmnnnnhhnnnidhhnhfvnhhhqd
llvvyllhlvnhqvvlphnninhhnnmhhhnntnhhnnmhhhnnnnnskhhlvqyhqhln
kvqpiqyqnqqvayhnhhnnk*ikwvvlh*mlqeillynkvl*mlleipavqqgatn

Frame C:
nf*iqfiylfiylfiysf*knyy*LYKTRKLKNMKSFGAKLKGLVSSGPSSVDLNFETAR
KEYTTLNETITKTYESLLKHDKNLQKTFIHPSSLNKNVQKYFPSSHPLTQYTTEVNKTIE
ASFNEWTQSQKANYDYIQQYLARSKFIKDAISDRDKLLEEVDKSASKIKSLKEKPSKEIH
KLQQEQNNYNAKRESFIIANQKALSDISQFFE---

---sn*ifrsiynysiyr*fscik*sk*w**wrfk**cy**csktittsikwrstttssf
fssttistttttswklpxtksisxtittttttiwgi*tttttttti*tttttsstittkt
cwwytfsiw*ttrwccpttistttticttttiptttticttttttttasttsssiini*t
rsnlsstktsrwrtttitttnesngwfcikcckksccttrcyecc*kfllynkvqq

Query= Contig-U11622-1 (Contig-U11622-1Q)
/CSM_Contig/Contig-U11622-1Q.Seq.d
         (1351 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U11622-1 (Contig-U11622-1Q) /CSM_Contig/Conti...  1548  0.0
Contig-U14070-1 (Contig-U14070-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U02501-1 (Contig-U02501-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U11900-1 (Contig-U11900-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U11845-1 (Contig-U11845-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U02517-1 (Contig-U02517-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U02042-1 (Contig-U02042-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U01465-1 (Contig-U01465-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U13967-1 (Contig-U13967-1Q) /CSM_Contig/Conti...    38  0.024
Contig-U12231-1 (Contig-U12231-1Q) /CSM_Contig/Conti...    38  0.024

>Contig-U11622-1 (Contig-U11622-1Q) /CSM_Contig/Contig-U11622-1Q.Seq.d
          Length = 1351

 Score = 1548 bits (781), Expect = 0.0
 Identities = 817/817 (100%)
 Strand = Plus / Plus

                                                                       
Query: 81  aaaactagaaaacttaaaaatatgaaatcttttggagcaaaactaaaaggattagtaagc 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81  aaaactagaaaacttaaaaatatgaaatcttttggagcaaaactaaaaggattagtaagc 140

                                                                       
Query: 141 tctggtccaagctcagttgatttaaactttgaaacagcaagaaaagaatatacaacactc 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tctggtccaagctcagttgatttaaactttgaaacagcaagaaaagaatatacaacactc 200

                                                                       
Query: 201 aatgaaactattactaaaacctatgaatctttattaaaacatgataaaaatttacaaaaa 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgaaactattactaaaacctatgaatctttattaaaacatgataaaaatttacaaaaa 260

                                                                       
Query: 261 acctttattcatccaagtagtttgaataagaatgttcaaaaatatttcccatcttcacat 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acctttattcatccaagtagtttgaataagaatgttcaaaaatatttcccatcttcacat 320

                                                                       
Query: 321 ccacttactcaatatacaactgaagtaaataaaactatagaagcaagttttaatgaatgg 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccacttactcaatatacaactgaagtaaataaaactatagaagcaagttttaatgaatgg 380

                                                                       
Query: 381 actcaaagtcaaaaagcaaattatgattatattcaacaatatttagcaagatctaaattt 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actcaaagtcaaaaagcaaattatgattatattcaacaatatttagcaagatctaaattt 440

                                                                       
Query: 441 attaaagatgcaatttctgatagagataaattattggaagaagttgataagagtgcatca 500
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attaaagatgcaatttctgatagagataaattattggaagaagttgataagagtgcatca 500

                                                                       
Query: 501 aagataaaatcattaaaagagaaaccatcaaaagaaattcataaattacaacaagaacaa 560
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagataaaatcattaaaagagaaaccatcaaaagaaattcataaattacaacaagaacaa 560

                                                                       
Query: 561 aacaattacaatgcaaagagagaatcatttataattgccaatcaaaaggcattatctgat 620
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacaattacaatgcaaagagagaatcatttataattgccaatcaaaaggcattatctgat 620

                                                                       
Query: 621 atatctcaattctttgagnnnnnnnnnnccagtaattgaatttttaggtcaatctacaac 680
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atatctcaattctttgagnnnnnnnnnnccagtaattgaatttttaggtcaatctacaac 680

                                                                       
Query: 681 tattccatctatagatgattctcctgtatcaagtaatccaagtagtggtagtagtggagg 740
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tattccatctatagatgattctcctgtatcaagtaatccaagtagtggtagtagtggagg 740

                                                                       
Query: 741 tttaaataataatgttactaataatgttcaaagaccatcaccacctcaatcaaatggcgc 800
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttaaataataatgttactaataatgttcaaagaccatcaccacctcaatcaaatggcgc 800

                                                                       
Query: 801 tccaccaccacgtccagtttcttcagctccacaaccatatcaaccacaaccacaacaagt 860
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tccaccaccacgtccagtttcttcagctccacaaccatatcaaccacaaccacaacaagt 860

                                                
Query: 861 tggaagttaccancaaccaaatcaatatcancaacca 897
           |||||||||||||||||||||||||||||||||||||
Sbjct: 861 tggaagttaccancaaccaaatcaatatcancaacca 897


 Score =  414 bits (209), Expect = e-115
 Identities = 209/209 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1143 gcaagcaccacctcgtccagtatcatcaacatttaaacaaggtccaacctatccagtacc 1202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 gcaagcaccacctcgtccagtatcatcaacatttaaacaaggtccaacctatccagtacc 1202

                                                                        
Query: 1203 aaaaccagcaggtggcgtaccacaaccatcacaacaacaaatgaatcaaatgggtggttt 1262
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 aaaaccagcaggtggcgtaccacaaccatcacaacaacaaatgaatcaaatgggtggttt 1262

                                                                        
Query: 1263 tgcattaaatgctgcaagaaatcctgctgtacaacaaggtgctatgaatgctgctagaaa 1322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1263 tgcattaaatgctgcaagaaatcctgctgtacaacaaggtgctatgaatgctgctagaaa 1322

                                         
Query: 1323 ttcctgctgtacaacaaggtgcaacaaat 1351
            |||||||||||||||||||||||||||||
Sbjct: 1323 ttcctgctgtacaacaaggtgcaacaaat 1351


 Score =  127 bits (64), Expect = 3e-29
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                        
Query: 993  accaagacctgttggtggtataccttctccatttggtaaaccaccaggtggtgctgcccc 1052
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993  accaagacctgttggtggtataccttctccatttggtaaaccaccaggtggtgctgcccc 1052

                
Query: 1053 acaa 1056
            ||||
Sbjct: 1053 acaa 1056


 Score = 30.2 bits (15), Expect = 5.9
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                               
Query: 829  ccacaaccatatcaaccac 847
            ||||||| |||||||||||
Sbjct: 1051 ccacaacaatatcaaccac 1069


 Score = 30.2 bits (15), Expect = 5.9
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                               
Query: 1224 acaaccatcacaacaacaa 1242
            ||||||| |||||||||||
Sbjct: 939  acaaccaccacaacaacaa 957


>Contig-U14070-1 (Contig-U14070-1Q) /CSM_Contig/Contig-U14070-1Q.Seq.d
          Length = 216

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 1004 ttggtggtataccttctccatttggta 1030
            ||||||||||||| |||||||||||||
Sbjct: 173  ttggtggtataccctctccatttggta 147


>Contig-U02501-1 (Contig-U02501-1Q) /CSM_Contig/Contig-U02501-1Q.Seq.d
          Length = 921

 Score = 42.1 bits (21), Expect = 0.002
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 836 catatcaaccacaaccacaac 856
           |||||||||||||||||||||
Sbjct: 817 catatcaaccacaaccacaac 837


 Score = 42.1 bits (21), Expect = 0.002
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 829 ccacaaccatatcaaccacaa 849
           |||||||||||||||||||||
Sbjct: 831 ccacaaccatatcaaccacaa 851


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 17,302
Number of Sequences: 6905
Number of extensions: 17302
Number of successful extensions: 2517
Number of sequences better than 10.0: 314
length of query: 1351
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1335
effective length of database: 5,564,391
effective search space: 7428461985
effective search space used: 7428461985
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U11622-1 (Contig-U11622-1Q) /CSM_Contig/Contig-U11622-1Q.Seq.d
         (1351 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ363736) Dictyostelium discoideum cDNA clone:ddc28p04, 5' ...  1051   0.0    1
(BJ362382) Dictyostelium discoideum cDNA clone:ddc21e18, 5' ...  1045   0.0    1
(BJ376362) Dictyostelium discoideum cDNA clone:ddc28p04, 3' ...   474   e-179  3
(BJ340122) Dictyostelium discoideum cDNA clone:dda11a21, 3' ...   391   e-104  1
(AU267507) Dictyostelium discoideum vegetative cDNA clone:VS...   299   1e-76  1
(AU267506) Dictyostelium discoideum vegetative cDNA clone:VS...   299   1e-76  1
(BJ376189) Dictyostelium discoideum cDNA clone:ddc21e18, 3' ...   133   2e-26  1
(AC117080) Dictyostelium discoideum chromosome 2 map complem...    52   0.056  1
(CU550727) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   0.13   2
(CU914799) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   0.13   2
(DB865042) Lipochromis sp. 'matumbi hunter' cDNA clone:hm785...    40   0.17   2
(DB870079) Lipochromis sp. 'matumbi hunter' cDNA clone:hm744...    40   0.17   2
(AL844881) Mouse DNA sequence from clone RP23-244B19 on chro...    50   0.22   1
(CR940348) Theileria annulata genomic DNA chromosome 2.            50   0.22   1
(CR038960) Reverse strand read from insert in 3'HPRT inserti...    50   0.22   1
(AC116551) Dictyostelium discoideum chromosome 2 map complem...    40   0.27   8
(CR536610) Zebrafish DNA sequence from clone CH211-200P13 in...    34   0.50   2
(FC817475) Sr_pAMT7_09a05_T7 S. ratti mixed stage pAMP Stron...    34   0.66   3
(CU469504) Zebrafish DNA sequence from clone DKEY-285C2 in l...    48   0.87   1
(ER433709) 1092963788292 Global-Ocean-Sampling_GS-35-01-01-1...    48   0.87   1
(DU095955) 110469 Tomato HindIII BAC Library Solanum lycoper...    48   0.87   1
(DW507919) GH_TMIRS_119_A07_F Cotton Normalized Library dT p...    48   0.87   1
(FG801151) G1148P322FH12.T0 Anolis carolinensis pooled norma...    48   0.87   1
(AF079445) Dictyostelium discoideum TipC (tipC) gene, comple...    34   0.96   5
(BM652988) 17000687377296 A.Gam.ad.cDNA1 Anopheles gambiae c...    34   1.1    3
(EK844322) 1093017717577 Global-Ocean-Sampling_GS-33-01-01-1...    40   1.1    2
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074...    36   1.2    7
(AC191698) Pan troglodytes BAC clone CH251-641G7 from chromo...    32   1.3    8
(BJ432039) Dictyostelium discoideum cDNA clone:ddv17m10, 3' ...    42   1.8    2
(AC115607) Dictyostelium discoideum chromosome 2 map 4559693...    40   1.8    5
(BJ402936) Dictyostelium discoideum cDNA clone:dds18b21, 3' ...    42   1.9    2
(BX936459) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    44   2.0    3
(CQ972456) Sequence 199 from Patent EP1491639.                     34   2.2    2
(CQ972362) Sequence 105 from Patent EP1491639.                     34   2.2    2
(EY329882) CAWY3057.fwd CAWY Helobdella robusta Subtracted E...    34   2.3    2
(DY892895) CeleSEQ12022 Cunninghamella elegans pBluescript (...    36   2.3    2
(EY329881) CAWY3057.rev CAWY Helobdella robusta Subtracted E...    34   2.3    2
(EC820008) SME00004209 esmbsro2 Sawyeria marylandensis cDNA,...    34   2.4    2
(BJ434556) Dictyostelium discoideum cDNA clone:ddv24p04, 3' ...    42   2.4    2
(AU052821) Dictyostelium discoideum slug cDNA, clone SLF166.       42   2.5    2
(CP000153) Sulfurimonas denitrificans DSM 1251, complete gen...    42   2.6    19
(BJ432270) Dictyostelium discoideum cDNA clone:ddv18o04, 3' ...    42   2.8    2
(DU517066) 1098609809884 CHORI-243 Ovis aries genomic clone ...    36   3.3    2
(AJ716320) Glomus mycorrhizal symbiont of Marchantia foliace...    46   3.5    1
(AJ699070) Glomus mycorrhizal symbiont of Marchantia foliace...    46   3.5    1
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    46   3.5    1
(AC126106) Rattus norvegicus clone CH230-26O4, *** SEQUENCIN...    46   3.5    1
(AC126074) Rattus norvegicus clone CH230-498H10, *** SEQUENC...    46   3.5    1
(AC120283) Rattus norvegicus clone CH230-42G14, *** SEQUENCI...    46   3.5    1
(CU582912) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   3.5    1
(ED414888) AUAC-aav56g10.b1 Ascaris suum whole genome shotgu...    46   3.5    1
(DU002158) 284144 Tomato MboI BAC Library Solanum lycopersic...    46   3.5    1
(CT256105) Sus scrofa genomic clone PigE-205F1, genomic surv...    46   3.5    1
(CL264467) ZMMBBb0621G07r ZMMBBb (HindIII) Zea mays subsp. m...    46   3.5    1
(BJ334327) Dictyostelium discoideum cDNA clone:dda45o19, 5' ...    46   3.5    1
(CP000383) Cytophaga hutchinsonii ATCC 33406, complete genome.     46   3.5    1
(DQ077553) Uncultured bacterium MedeBAC35C06 clone MedeBAC35...    36   3.8    3
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105...    40   4.1    7
(CT487231) A BAC library has been constructed from cultivar ...    42   4.2    2
(EK448724) 1095467062154 Global-Ocean-Sampling_GS-32-01-01-1...    36   4.5    2
(AL409926) T7 end of clone XAV0AA002G07 of library XAV0AA fr...    44   5.1    2
(AC116960) Dictyostelium discoideum chromosome 2 map complem...    40   5.6    8
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572...    36   7.2    8
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701...    34   7.8    7
(CD096989) ME1-0011T-M132-B02-U.G ME1-0011 Schistosoma manso...    36   7.8    2
(BD184857) Nucleic acid molecule and polypeptide specific to...    42   8.1    2
(AR637641) Sequence 188 from patent US 6855814.                    42   8.1    2
(AR204292) Sequence 188 from patent US 6365723.                    42   8.1    2
(FC646857) CAXU8683.fwd CAXU Lottia gigantea from female gon...    32   8.6    2
(FC791308) CBGC20897.fwd CBGC Lottia gigantea 15h 18h embryo...    32   8.7    2
(FC791307) CBGC20897.rev CBGC Lottia gigantea 15h 18h embryo...    32   8.7    2
(CD190563) MS1-0064U-A263-G12-U.B MS1-0064 Schistosoma manso...    36   8.8    2
(AC208935) Populus trichocarpa clone JGIACSB1085-D05, comple...    42   8.9    2
(CT737197) Zebrafish DNA sequence from clone DKEYP-94F8 in l...    40   9.3    6
(CZ538800) SRAA-aad21h10.b1 Strongyloides ratti whole genome...    32   9.8    3

>(BJ363736) Dictyostelium discoideum cDNA clone:ddc28p04, 5' end,
           single read.
          Length = 586

 Score = 1051 bits (530), Expect = 0.0
 Identities = 530/530 (100%)
 Strand = Plus / Plus


Query: 108 tcttttggagcaaaactaaaaggattagtaagctctggtccaagctcagttgatttaaac 167
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56  tcttttggagcaaaactaaaaggattagtaagctctggtccaagctcagttgatttaaac 115


Query: 168 tttgaaacagcaagaaaagaatatacaacactcaatgaaactattactaaaacctatgaa 227
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 tttgaaacagcaagaaaagaatatacaacactcaatgaaactattactaaaacctatgaa 175


Query: 228 tctttattaaaacatgataaaaatttacaaaaaacctttattcatccaagtagtttgaat 287
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 tctttattaaaacatgataaaaatttacaaaaaacctttattcatccaagtagtttgaat 235


Query: 288 aagaatgttcaaaaatatttcccatcttcacatccacttactcaatatacaactgaagta 347
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 aagaatgttcaaaaatatttcccatcttcacatccacttactcaatatacaactgaagta 295


Query: 348 aataaaactatagaagcaagttttaatgaatggactcaaagtcaaaaagcaaattatgat 407
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 aataaaactatagaagcaagttttaatgaatggactcaaagtcaaaaagcaaattatgat 355


Query: 408 tatattcaacaatatttagcaagatctaaatttattaaagatgcaatttctgatagagat 467
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tatattcaacaatatttagcaagatctaaatttattaaagatgcaatttctgatagagat 415


Query: 468 aaattattggaagaagttgataagagtgcatcaaagataaaatcattaaaagagaaacca 527
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aaattattggaagaagttgataagagtgcatcaaagataaaatcattaaaagagaaacca 475


Query: 528 tcaaaagaaattcataaattacaacaagaacaaaacaattacaatgcaaagagagaatca 587
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tcaaaagaaattcataaattacaacaagaacaaaacaattacaatgcaaagagagaatca 535


Query: 588 tttataattgccaatcaaaaggcattatctgatatatctcaattctttga 637
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 tttataattgccaatcaaaaggcattatctgatatatctcaattctttga 585

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,316,792,710
Number of extensions: 81329882
Number of successful extensions: 6810258
Number of sequences better than 10.0: 76
Length of query: 1351
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1327
Effective length of database: 97,308,875,965
Effective search space: 129128878405555
Effective search space used: 129128878405555
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U11622-1 (Contig-U11622-1Q) /CSM_Contig/Contig-U11622-1Q.Seq.d
         (1351 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC115612_14(AC115612|pid:none) Dictyostelium discoideum chromoso...    60   1e-07
DQ011582_1(DQ011582|pid:none) Plasmodium cynomolgi Mulligan reti...    45   0.005
FM992695_234(FM992695|pid:none) Candida dubliniensis CD36 chromo...    44   0.010
(Q5A216) RecName: Full=Probable kinetochore protein NDC80;             43   0.023
CP001185_773(CP001185|pid:none) Thermosipho africanus TCF52B, co...    43   0.023
BT026327_1(BT026327|pid:none) Bos taurus centrosomal protein 135...    42   0.051
AM920435_105(AM920435|pid:none) Penicillium chrysogenum Wisconsi...    42   0.067
CR940347_653(CR940347|pid:none) Theileria annulata strain Ankara...    41   0.11
CP000123_802(CP000123|pid:none) Mycoplasma capricolum subsp. cap...    40   0.15
AY501886_1(AY501886|pid:none) Plasmodium vivax strain Thailand-N...    40   0.19
B42771(B42771)reticulocyte-binding protein 2 - Plasmodium vivax ...    40   0.19
CU928180_530(CU928180|pid:none) Kluyveromyces thermotolerans str...    40   0.19
FM992694_23(FM992694|pid:none) Candida dubliniensis CD36 chromos...    40   0.25
AE017348_70(AE017348|pid:none) Cryptococcus neoformans var. neof...    40   0.25
AF095842_1(AF095842|pid:none) Entosiphon sulcatum unknown mRNA, ...    40   0.25
CP001209_6(CP001209|pid:none) Borrelia burgdorferi ZS7 plasmid Z...    40   0.25
(Q5JRB0) RecName: Full=Melanoma inhibitory activity protein 3; A...    39   0.33
AK296712_1(AK296712|pid:none) Homo sapiens cDNA FLJ56455 complet...    39   0.33
CR382137_815(CR382137|pid:none) Debaryomyces hansenii strain CBS...    39   0.33
CP000743_812(CP000743|pid:none) Methanococcus aeolicus Nankai-3,...    39   0.33
AM422018_415(AM422018|pid:none) Candidatus Phytoplasma australie...    39   0.43
BA000016_1884(BA000016|pid:none) Clostridium perfringens str. 13...    39   0.56
CP001581_2831(CP001581|pid:none) Clostridium botulinum A2 str. K...    39   0.56
CU207366_1338(CU207366|pid:none) Gramella forsetii KT0803 comple...    39   0.56
AY059759_1(AY059759|pid:none) Arabidopsis thaliana putative bZIP...    39   0.56
CP001407_1184(CP001407|pid:none) Bacillus cereus 03BB102, comple...    39   0.56
AE017333_1334(AE017333|pid:none) Bacillus licheniformis DSM 13, ...    39   0.56
FM992692_166(FM992692|pid:none) Candida dubliniensis CD36 chromo...    39   0.56
CP001230_286(CP001230|pid:none) Persephonella marina EX-H1, comp...    38   0.74
FN392322_837(FN392322|pid:none) Pichia pastoris GS115 chromosome...    38   0.74
(Q0VC16) RecName: Full=Melanoma inhibitory activity protein 3; A...    38   0.96
CP000227_1252(CP000227|pid:none) Bacillus cereus Q1, complete ge...    38   0.96
CP000001_1154(CP000001|pid:none) Bacillus cereus E33L, complete ...    38   0.96
AP007150_559(AP007150|pid:none) Aspergillus oryzae RIB40 genomic...    37   1.3
CP000496_810(CP000496|pid:none) Pichia stipitis CBS 6054 chromos...    37   1.3
CR382138_236(CR382138|pid:none) Debaryomyces hansenii strain CBS...    37   1.3
BT077367_1(BT077367|pid:none) Lepeophtheirus salmonis Pacific fo...    37   1.3
AE013599_1936(AE013599|pid:none) Drosophila melanogaster chromos...    37   1.3
AM422018_797(AM422018|pid:none) Candidatus Phytoplasma australie...    37   1.3
(Q8BI84) RecName: Full=Melanoma inhibitory activity protein 3; A...    37   1.3
CR382129_660(CR382129|pid:none) Yarrowia lipolytica strain CLIB1...    37   1.3
T52411(T52411) bZIP protein [imported] - Arabidopsis thaliana  &...    37   1.3
AM946015_1594(AM946015|pid:none) Streptococcus uberis 0140J comp...    37   1.3
AE015450_322(AE015450|pid:none) Mycoplasma gallisepticum strain ...    37   1.6
BT023768_1(BT023768|pid:none) Drosophila melanogaster RE14758 fu...    37   1.6
(Q68DK7) RecName: Full=Male-specific lethal 1 homolog;          ...    37   1.6
CP000496_389(CP000496|pid:none) Pichia stipitis CBS 6054 chromos...    37   1.6
AY063764_1(AY063764|pid:none) Plasmodium vinckei vinckepain-2 mR...    37   1.6
(O67124) RecName: Full=Probable DNA double-strand break repair r...    37   1.6
EU831932_1(EU831932|pid:none) Synthetic construct Homo sapiens c...    37   1.6
AE017244_648(AE017244|pid:none) Mycoplasma hyopneumoniae 7448, c...    37   1.6
CP000312_1813(CP000312|pid:none) Clostridium perfringens SM101, ...    37   1.6
AE017194_1384(AE017194|pid:none) Bacillus cereus ATCC 10987, com...    37   2.1
A82083(A82083) conserved hypothetical protein VC2386 [imported] ...    37   2.1
CP000025_577(CP000025|pid:none) Campylobacter jejuni RM1221, com...    37   2.1
BC136117_1(BC136117|pid:none) Xenopus tropicalis kinesin family ...    37   2.1
CP000568_769(CP000568|pid:none) Clostridium thermocellum ATCC 27...    37   2.1
BC149428_1(BC149428|pid:none) Bos taurus FERM domain containing ...    37   2.1
A42771(A42771)reticulocyte-binding protein 1 - Plasmodium vivax        37   2.1
AB093232_1(AB093232|pid:none) Mus musculus premature mRNA for mK...    37   2.1
CP000123_805(CP000123|pid:none) Mycoplasma capricolum subsp. cap...    36   2.8
(Q6XHA5) RecName: Full=Probable serine/threonine-protein kinase ...    36   2.8
AF538602_3(AF538602|pid:none) Choristoneura fumiferana granulovi...    36   2.8
CP001283_1085(CP001283|pid:none) Bacillus cereus AH820, complete...    36   2.8
CR940353_399(CR940353|pid:none) Theileria annulata strain Ankara...    36   2.8
CP000501_17(CP000501|pid:none) Pichia stipitis CBS 6054 chromoso...    36   2.8
CP000990_3(CP000990|pid:none) Borrelia duttonii Ly plasmid pl70,...    36   2.8
AY391466_1(AY391466|pid:none) Danio rerio transcription factor D...    36   2.8
CP001047_343(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ...    36   2.8
(Q9UTK5) RecName: Full=Abnormal long morphology protein 1; AltNa...    36   2.8
BC172315_1(BC172315|pid:none) Synthetic construct Homo sapiens c...    36   3.6
AM412317_2647(AM412317|pid:none) Clostridium botulinum A str. AT...    36   3.6
AM502239_187(AM502239|pid:none) Leishmania infantum chromosome 21.     36   3.6
AB023230_1(AB023230|pid:none) Homo sapiens mRNA for KIAA1013 pro...    36   3.6
U75357_1(U75357|pid:none) Schizosaccharomyces pombe myosin II (m...    36   3.6
(Q9USI6) RecName: Full=Myosin type-2 heavy chain 1; AltName: Ful...    36   3.6
CR382125_227(CR382125|pid:none) Kluyveromyces lactis strain NRRL...    36   3.6
CP001348_539(CP001348|pid:none) Clostridium cellulolyticum H10, ...    36   3.6
AL009126_2012(AL009126|pid:none) Bacillus subtilis subsp. subtil...    36   3.6
AK295045_1(AK295045|pid:none) Homo sapiens cDNA FLJ57979 complet...    36   3.6
AM502249_357(AM502249|pid:none) Leishmania infantum chromosome 31.     36   3.6
(Q9Y2L6) RecName: Full=FERM domain-containing protein 4B; AltNam...    36   3.6
CP001391_228(CP001391|pid:none) Wolbachia sp. wRi, complete geno...    36   3.6
CP000813_2811(CP000813|pid:none) Bacillus pumilus SAFR-032, comp...    36   3.6
BA000026_156(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c...    36   3.6
(Q6RT24) RecName: Full=Centromere-associated protein E; AltName:...    35   4.8
AL590963_3(AL590963|pid:none) Mouse DNA sequence from clone RP23...    35   4.8
AK148283_1(AK148283|pid:none) Mus musculus B16 F10Y cells cDNA, ...    35   4.8
CP000924_1732(CP000924|pid:none) Thermoanaerobacter pseudethanol...    35   4.8
BC095295_1(BC095295|pid:none) Danio rerio transcription factor D...    35   4.8
AY501889_1(AY501889|pid:none) Plasmodium vivax strain Thailand-N...    35   4.8
AE017332_642(AE017332|pid:none) Mycoplasma hyopneumoniae 232, co...    35   4.8
CP000099_2139(CP000099|pid:none) Methanosarcina barkeri str. Fus...    35   4.8
(Q00798) RecName: Full=Reticulocyte-binding protein 1; Flags: Pr...    35   4.8
(Q54C77) RecName: Full=Probable inactive serine/threonine-protei...    35   4.8
FJ531863_1(FJ531863|pid:none) Streptococcus sp. 'group G' isolat...    35   4.8
DQ011583_1(DQ011583|pid:none) Plasmodium cynomolgi Berok reticul...    35   4.8
AK014463_1(AK014463|pid:none) Mus musculus 16 days embryo head c...    35   4.8
AY501884_1(AY501884|pid:none) Plasmodium vivax strain Salvador I...    35   4.8
AM295250_504(AM295250|pid:none) Staphylococcus carnosus subsp. c...    35   4.8
(Q9D5C9) RecName: Full=Male-specific lethal 1 homolog;          ...    35   4.8
CR380953_99(CR380953|pid:none) Candida glabrata strain CBS138 ch...    35   4.8
AM910984_119(AM910984|pid:none) Plasmodium knowlesi strain H chr...    35   4.8
CP001185_924(CP001185|pid:none) Thermosipho africanus TCF52B, co...    35   4.8
T24565(T24565) hypothetical protein T06C12.14 - Caenorhabditis e...    35   4.8
CP000553_183(CP000553|pid:none) Prochlorococcus marinus str. NAT...    35   6.2
AB365348_5(AB365348|pid:none) Clostridium butyricum plasmid pCBM...    35   6.2
FM992689_371(FM992689|pid:none) Candida dubliniensis CD36 chromo...    35   6.2
AE017263_33(AE017263|pid:none) Mesoplasma florum L1 complete gen...    35   6.2
BX572633_2(BX572633|pid:none) Zebrafish DNA sequence from clone ...    35   6.2
AY445042_1(AY445042|pid:none) Streptococcus pyogenes SpyM6 mefA ...    35   6.2
CP001083_2760(CP001083|pid:none) Clostridium botulinum Ba4 str. ...    35   6.2
S70553(S70553) chromosome-associated protein - fruit fly (Drosop...    35   6.2
AM910987_126(AM910987|pid:none) Plasmodium knowlesi strain H chr...    35   6.2
CP000896_346(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co...    35   6.2
AE014298_2532(AE014298|pid:none) Drosophila melanogaster chromos...    35   6.2
T21785(T21785;T21791) hypothetical protein F35E8.10 - Caenorhabd...    35   6.2
T26569(T26569)hypothetical protein Y26D4A.9 - Caenorhabditis ele...    35   8.1
CP000726_2220(CP000726|pid:none) Clostridium botulinum A str. AT...    35   8.1
AB384463_1(AB384463|pid:none) Synthetic construct DNA, clone: pF...    35   8.1
CP000123_803(CP000123|pid:none) Mycoplasma capricolum subsp. cap...    35   8.1
CP000979_95(CP000979|pid:none) Borrelia duttonii Ly plasmid pl16...    35   8.1
DQ973816_1(DQ973816|pid:none) Plasmodium coatneyi reticulocyte-b...    35   8.1
CU928169_40(CU928169|pid:none) Kluyveromyces thermotolerans stra...    35   8.1
CP000728_2572(CP000728|pid:none) Clostridium botulinum F str. La...    35   8.1
EU637020_7(EU637020|pid:none) Philodina roseola peptidylprolyl i...    35   8.1
CP000123_332(CP000123|pid:none) Mycoplasma capricolum subsp. cap...    35   8.1
AB002334_1(AB002334|pid:none) Homo sapiens mRNA for KIAA0336 gen...    35   8.1
CU633895_378(CU633895|pid:none) Podospora anserina genomic DNA c...    35   8.1
DQ011581_1(DQ011581|pid:none) Plasmodium cynomolgi Berok reticul...    35   8.1
CP001348_1744(CP001348|pid:none) Clostridium cellulolyticum H10,...    35   8.1
CP000382_1316(CP000382|pid:none) Clostridium novyi NT, complete ...    35   8.1
CP001432_9(CP001432|pid:none) Borrelia valaisiana VS116 plasmid ...    35   8.1
DQ407983_1(DQ407983|pid:none) Plasmodium falciparum isolate M24 ...    35   8.1

>AC115612_14(AC115612|pid:none) Dictyostelium discoideum chromosome
           2 map 6245135-6357017 strain AX4, complete sequence.
          Length = 913

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/148 (24%), Positives = 71/148 (47%)
 Frame = +3

Query: 153 SVDLNFETARKEYTTLNETITKTYESLLKHDKNLQKTFIHPSSLNKNVQKYFPSSHPLTQ 332
           S D N++  +KE+  L+  +   Y+SL  +  +L++ ++   S      K     HPL++
Sbjct: 2   SGDSNYDIVKKEFFNLSHYVISIYDSLNIYCTSLKELYLGSDSFINTTSKCLEPDHPLSK 61

Query: 333 YTTEVNKTIEASFNEWTQSQKANYDYIQQYLARSKFIKDAISDRDKLLEEVDKSASKIKS 512
           Y+  +   IE SFN W+ +Q+ N+  +  YL       + +      +E  D +  +
Sbjct: 62  YSLGIKSEIENSFNGWSNNQQENFQKLVNYL-------NGLESARLKIENFDNNGFRDFK 114

Query: 513 LKEKPSKEIHKLQQEQNNYNAKRESFII 596
           LK +  K+++ L      +++K E+F I
Sbjct: 115 LKTEIFKDVNNL------FDSKSENFDI 136

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,267,240,488
Number of extensions: 19265167
Number of successful extensions: 70875
Number of sequences better than 10.0: 134
Number of HSP's gapped: 70544
Number of HSP's successfully gapped: 139
Length of query: 450
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 318
Effective length of database: 623,955,076
Effective search space: 198417714168
Effective search space used: 198417714168
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.68  gvh: 0.36  alm: 0.48  top: 0.53  tms: 0.00  mit: 0.30  mip: 0.02
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 36.0 %: nuclear
	  8.0 %: mitochondrial
	  4.0 %: extracellular, including cell wall
	  4.0 %: cytoskeletal
	  4.0 %: peroxisomal

>> prediction for Contig-U11622-1 is cyt