| Contig-U11617-1 |
| Contig ID |
Contig-U11617-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
2033 |
| Chromosome number (1..6, M) |
2 |
| Chromosome length |
8467578 |
| Start point |
5782978 |
| End point |
5785004 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
6 |
| Number of EST |
7 |
| Link to clone list |
U11617 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.25 |
| Homology vs DNA |
Query= Contig-U11617-1 (Contig-U11617-1Q) /CSM_Contig/Contig-U11617-1Q.Seq.d
(2043 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 1853 0.0 2
(BJ375768) Dictyostelium discoideum cDNA clone:ddc19l21, 3' ... 1312 0.0 1
(BJ427527) Dictyostelium discoideum cDNA clone:ddv62o17, 5' ... 1217 0.0 1
(BJ423989) Dictyostelium discoideum cDNA clone:ddv51e05, 5' ... 1179 0.0 1
(BJ421157) Dictyostelium discoideum cDNA clone:ddv41l21, 5' ... 1150 0.0 1
(BJ427392) Dictyostelium discoideum cDNA clone:ddv62d12, 5' ... 1025 0.0 1
(BJ362048) Dictyostelium discoideum cDNA clone:ddc19l21, 5' ... 706 0.0 2
(BJ427494) Dictyostelium discoideum cDNA clone:ddv62i16, 5' ... 696 0.0 2
(AX489170) Sequence 6470 from Patent WO02053728. 101 5e-40 6
(DQ331603) Synthetic construct Saccharomyces cerevisiae clon... 76 1e-34 7
(EA397291) Sequence 46115 from patent US 7314974. 76 1e-34 7
(DJ208161) Method for identification of useful proteins deri... 76 1e-34 7
(J03530) Yeast (S.cerevisiae) RNA polymerase A(I) large subu... 76 4e-34 7
(Z75249) S.cerevisiae chromosome XV reading frame ORF YOR341w. 76 5e-34 7
(X95720) S.cerevisiae 40 kb segment on the right arm of chro... 76 7e-30 8
(DJ131885) Method for identification of useful proteins deri... 64 9e-30 6
(AR548831) Sequence 3962 from patent US 6747137. 101 6e-26 4
(EA377432) Sequence 26255 from patent US 7314974. 62 6e-23 6
(DI127383) Target gene of anti-cancer drugs and screening ki... 62 6e-23 6
(X14783) Fission yeast DNA for nuc1 gene for RNA polymerase ... 62 8e-23 6
(DJ025883) Genome-wide DNA marker of Saccharomyces cerevisiae. 76 2e-22 3
(M37411) S.pombe RNA polymerase I largest subunit gene, comp... 62 3e-22 6
(CR382135) Debaryomyces hansenii chromosome C of strain CBS7... 76 8e-22 4
(AB092413) Entamoeba histolytica gene for RNA polymerase II ... 72 1e-20 3
(DY885840) CeleSEQ1292 Cunninghamella elegans pBluescript (E... 80 1e-20 2
(DY888971) CeleSEQ6425 Cunninghamella elegans pBluescript (E... 80 1e-20 2
(DY888448) CeleSEQ5449 Cunninghamella elegans pBluescript (E... 80 1e-20 2
(DY887009) CeleSEQ2870 Cunninghamella elegans pBluescript (E... 80 1e-20 2
(AY623801) Entamoeba histolytica RNA polymerase II largest s... 72 1e-20 3
(EF014373) Issatchenkia orientalis RNA polymerase II largest... 58 2e-20 4
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 84 2e-17 12
(BH151499) ENTQO54TF Entamoeba histolytica Sheared DNA Entam... 62 2e-15 2
(L11172) Plasmodium falciparum RNA polymerase I gene, comple... 52 4e-15 7
(BH151381) ENTQO87TF Entamoeba histolytica Sheared DNA Entam... 62 5e-15 3
(CZ540186) SRAA-aad30c02.g1 Strongyloides ratti whole genome... 96 6e-15 1
(AM646654) Entamoeba moshkovskii FIC GSS, clone mosh041d01.p1k. 82 2e-14 2
(AM660820) Entamoeba moshkovskii FIC GSS, clone mosh103d06.p1k. 82 3e-14 2
(CR382133) Debaryomyces hansenii chromosome A of strain CBS7... 66 4e-14 2
(BI773452) ra47d09.y1 Bird-Rao Meloidogyne incognita J2 Melo... 92 1e-13 1
(CQ593694) Sequence 21452 from Patent WO0171042. 86 1e-13 3
(CU329671) Schizosaccharomyces pombe chromosome II. 62 5e-12 4
(EC053144) 2646441 AB01 Drosophila melanogaster cDNA clone 1... 86 6e-12 1
(EC051641) 2647425 AB01 Drosophila melanogaster cDNA clone 1... 86 6e-12 1
(BH154356) ENTRN02TF Entamoeba histolytica Sheared DNA Entam... 62 7e-12 2
(BX538352) Cryptosporidium parvum chromosome 6, complete seq... 66 8e-12 2
(Y09103) D.melanogaster RPA1 gene. 68 1e-11 4
(CQ593693) Sequence 21451 from Patent WO0171042. 68 2e-11 4
(DQ294604) Scutellospora heterogama isolate AFTOL-ID 138 RNA... 58 3e-11 4
(AZ678240) ENTKL21TF Entamoeba histolytica Sheared DNA Entam... 62 5e-11 3
(CR380951) Candida glabrata strain CBS138 chromosome A compl... 52 7e-11 9
(FE233404) CAPG2267.fwd CAPG Naegleria gruberi amoeba stage ... 56 9e-11 2
(DJ129733) Method for identification of useful proteins deri... 52 1e-10 4
(AC005646) Drosophila melanogaster strain y chromosome 2 clo... 68 3e-10 7
(AF395835) Cercomonas ATCC50319 RNA polymerase II largest su... 60 3e-10 2
(EC055656) 4770069 AB03 Drosophila melanogaster cDNA clone 1... 80 4e-10 1
(AC014449) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 68 7e-10 4
(AC005645) Drosophila melanogaster strain y chromosome 2 clo... 68 1e-09 6
(CR382139) Debaryomyces hansenii chromosome G of strain CBS7... 68 3e-09 2
(AX489341) Sequence 6641 from Patent WO02053728. 52 6e-09 4
(AX831296) Sequence 2016 from Patent WO03072602. 76 6e-09 1
(AX820266) Sequence 2016 from Patent EP1338608. 76 6e-09 1
(AX596402) Sequence 2056 from Patent EP1258494. 76 6e-09 1
(AL401263) T3 end of clone AS0AA026G01 of library AS0AA from... 76 6e-09 1
(AC008306) Drosophila melanogaster, chromosome 2R, region 51... 68 1e-08 7
(AC216543) Populus trichocarpa clone POP015-B14, complete se... 66 1e-08 6
(DQ158856) Bigelowiella natans nucleomorph chromosome 1, com... 60 1e-08 2
(CQ456131) Sequence 21891 from Patent WO0192523. 64 2e-08 2
(AL408368) T3 end of clone AV0AA008A12 of library AV0AA from... 60 3e-08 2
(AL408367) T7 end of clone AV0AA008A12 of library AV0AA from... 60 3e-08 2
(AC182686) Populus trichocarpa clone Pop1-37M17, complete se... 66 3e-08 4
(CP000882) Hemiselmis andersenii chromosome 2, complete sequ... 56 6e-08 2
(AF315823) Stylonychia mytilus DNA-dependent RNA polymerase ... 50 7e-08 3
(AZ669613) ENTKB67TR Entamoeba histolytica Sheared DNA Entam... 72 8e-08 2
(AZ542723) ENTEM13TRB Entamoeba histolytica Sheared DNA Enta... 72 8e-08 2
(AL423150) T3 end of clone AZ0AA006E12 of library AZ0AA from... 64 8e-08 2
(AZ674678) ENTLL80TR Entamoeba histolytica Sheared DNA Entam... 72 9e-08 1
(CZ540740) SRAA-aad33g07.b1 Strongyloides ratti whole genome... 72 9e-08 1
(CZ528188) SRAA-aac53g05.b1 Strongyloides ratti whole genome... 72 9e-08 1
(AL405776) T3 end of clone AU0AA006C08 of library AU0AA from... 54 9e-08 2
(CR382126) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 58 1e-07 4
(CZ544381) SRAA-aad55e10.g1 Strongyloides ratti whole genome... 54 1e-07 2
(CZ221571) AIAA-aac62k17.b1 Ancylostoma caninum whole genome... 58 1e-07 2
(AM449949) Vitis vinifera contig VV78X187722.15, whole genom... 70 4e-07 1
(CJ412029) Molgula tectiformis cDNA, larva clone:mtlv011h11,... 58 4e-07 2
(EX820183) CBNA6943.fwd CBNA Phycomyces blakesleeanus NRRL15... 48 4e-07 2
(AM637319) Entamoeba dispar GSS, clone dispar44g07.q1k. 64 6e-07 2
(AL402489) T3 end of clone AT0AA002D05 of library AT0AA from... 66 1e-06 2
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s... 52 1e-06 2
(AF058710) Dictyostelium discoideum RNA polymerase II larges... 68 1e-06 1
(AE013599) Drosophila melanogaster chromosome 2R, complete s... 68 1e-06 1
(CR940352) Theileria annulata genomic DNA chromosome 3. 68 1e-06 1
(CZ282447) cp23h10.f Candida parapsilosis Random Genomic Lib... 68 1e-06 1
(EF014394) Neocallimastix frontalis RNA polymerase II larges... 50 2e-06 3
(BX649607) Aspergillus fumigatus BAC pilot project supercont... 56 3e-06 4
(AZ685442) ENTKE82TR Entamoeba histolytica Sheared DNA Entam... 62 4e-06 2
(AZ673045) ENTFZ92TR Entamoeba histolytica Sheared DNA Entam... 62 4e-06 2
(AZ549009) ENTEB01TF Entamoeba histolytica Sheared DNA Entam... 62 5e-06 2
(BH152432) ENTQJ19TR Entamoeba histolytica Sheared DNA Entam... 62 5e-06 2
(AL404064) T3 end of clone AT0AA012H02 of library AT0AA from... 66 6e-06 1
(EA377309) Sequence 26132 from patent US 7314974. 52 7e-06 2
>(AC115598) Dictyostelium discoideum chromosome 2 map 581427-735498 strain
AX4, complete sequence.
Length = 154071
Score = 1853 bits (935), Expect(2) = 0.0
Identities = 935/935 (100%)
Strand = Plus / Minus
Query: 420 ctaaaggtttggagattactcgtgactctcacgttatcattcgtcaaaatgaaatggttg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118332 ctaaaggtttggagattactcgtgactctcacgttatcattcgtcaaaatgaaatggttg 118273
Query: 480 ctggtattcttgataaaggtcatttcggtgcaagtagttatggtttggttcatacttgtt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118272 ctggtattcttgataaaggtcatttcggtgcaagtagttatggtttggttcatacttgtt 118213
Query: 540 atgaactttatgatccagatgttgctggttcccttttaacactattaggtcgtatgttta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118212 atgaactttatgatccagatgttgctggttcccttttaacactattaggtcgtatgttta 118153
Query: 600 caaattatcttcaatcacgtggtttcacttgtggtgtagacgatcttttaatgaagaaca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118152 caaattatcttcaatcacgtggtttcacttgtggtgtagacgatcttttaatgaagaaca 118093
Query: 660 aagaagagaagttcagagttgaaactttaaagaaagcaaatgaagaaggttataccgttg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118092 aagaagagaagttcagagttgaaactttaaagaaagcaaatgaagaaggttataccgttg 118033
Query: 720 ctgctaaatttgctgatttatcaaaatatgatgaacaaaaagctagagatttcttttcaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118032 ctgctaaatttgctgatttatcaaaatatgatgaacaaaaagctagagatttcttttcaa 117973
Query: 780 aagcactccaaagtgaaagagaagttgcacgtcttgatggtttgttaaagaaaggtttaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117972 aagcactccaaagtgaaagagaagttgcacgtcttgatggtttgttaaagaaaggtttaa 117913
Query: 840 atcaatatacctctaaagttattgatactttaattccaggtggtcaacaaaaacctttcc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117912 atcaatatacctctaaagttattgatactttaattccaggtggtcaacaaaaacctttcc 117853
Query: 900 caaagaataatttctcattgatgactgtttccggtgctaaaggtagtgttgtaaatttct 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117852 caaagaataatttctcattgatgactgtttccggtgctaaaggtagtgttgtaaatttct 117793
Query: 960 cacaagtttcatgtctattgggtcaacaggagttggagggtaaacgtgtaccacgtatgg 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117792 cacaagtttcatgtctattgggtcaacaggagttggagggtaaacgtgtaccacgtatgg 117733
Query: 1020 ttagtggtaaaacattaccaagtttccaagcttatgatgcctctgcaagagctggtggtt 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117732 ttagtggtaaaacattaccaagtttccaagcttatgatgcctctgcaagagctggtggtt 117673
Query: 1080 tcgttatggatcgtttcttgactggtgtacgtccacaagattatttcttccattgtatgg 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117672 tcgttatggatcgtttcttgactggtgtacgtccacaagattatttcttccattgtatgg 117613
Query: 1140 ctggtagagagggtttaatcgatactgcagttaaaacatcacgttctggttatcttcaac 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117612 ctggtagagagggtttaatcgatactgcagttaaaacatcacgttctggttatcttcaac 117553
Query: 1200 gttgtctcattaaacatttggaaggtttatcagttcaatatgataatacagttagagaat 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117552 gttgtctcattaaacatttggaaggtttatcagttcaatatgataatacagttagagaat 117493
Query: 1260 ccgatggttcagtaattcaattcaattatggtgaagattcattagagattggtaaaactc 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117492 ccgatggttcagtaattcaattcaattatggtgaagattcattagagattggtaaaactc 117433
Query: 1320 cataccttactaaattcccaatcattgcagaaaac 1354
|||||||||||||||||||||||||||||||||||
Sbjct: 117432 cataccttactaaattcccaatcattgcagaaaac 117398
Score = 1267 bits (639), Expect(2) = 0.0
Identities = 639/639 (100%)
Strand = Plus / Minus
Query: 1376 caatcgtgatggtaaaatcaatgaaaaagatttccgtaatcttatgtatctctattattc 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117173 caatcgtgatggtaaaatcaatgaaaaagatttccgtaatcttatgtatctctattattc 117114
Query: 1436 acgtagtatggtttctccaggtgaaagtgttggtttactttgtgctcaatccattggtga 1495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117113 acgtagtatggtttctccaggtgaaagtgttggtttactttgtgctcaatccattggtga 117054
Query: 1496 accatcaactcaaatgactttaaatactttccatttggctggtagaggtgaagcaaatgt 1555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117053 accatcaactcaaatgactttaaatactttccatttggctggtagaggtgaagcaaatgt 116994
Query: 1556 aactttaggtattccacgtcttcgtgaattaattatgacagcaactactaaaccaatcac 1615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116993 aactttaggtattccacgtcttcgtgaattaattatgacagcaactactaaaccaatcac 116934
Query: 1616 tccattaatggaattccaaattaatgattcaactaataaagttgaaactgaaaagatggc 1675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116933 tccattaatggaattccaaattaatgattcaactaataaagttgaaactgaaaagatggc 116874
Query: 1676 aaaatatttagagattttaaaactttccgatattatcaaggatattaccgttcaagaata 1735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116873 aaaatatttagagattttaaaactttccgatattatcaaggatattaccgttcaagaata 116814
Query: 1736 tttccaagataccaatagaaattatgatattgaaattgaattcattccaactttacaaca 1795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116813 tttccaagataccaatagaaattatgatattgaaattgaattcattccaactttacaaca 116754
Query: 1796 agttttatcattacatagaattaaagagaaacaattaaataaattatttggtgaatttaa 1855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116753 agttttatcattacatagaattaaagagaaacaattaaataaattatttggtgaatttaa 116694
Query: 1856 taaagtaattaagagacaagttaagagtcaaggtaaattaaaagttaataatggtgatat 1915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116693 taaagtaattaagagacaagttaagagtcaaggtaaattaaaagttaataatggtgatat 116634
Query: 1916 tggtttaggttcaaaagttagaggtagtgatttggttgaagatgattctttaacaattaa 1975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116633 tggtttaggttcaaaagttagaggtagtgatttggttgaagatgattctttaacaattaa 116574
Query: 1976 tgacgatgatgctccagcaaatgatgataccaccaataa 2014
|||||||||||||||||||||||||||||||||||||||
Sbjct: 116573 tgacgatgatgctccagcaaatgatgataccaccaataa 116535
Score = 831 bits (419), Expect(2) = 0.0
Identities = 419/419 (100%)
Strand = Plus / Minus
Query: 1 tcaaattgttcaacttataatgcagatttcgatggtgatgaaatgaatattcatttccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118750 tcaaattgttcaacttataatgcagatttcgatggtgatgaaatgaatattcatttccca 118691
Query: 61 caatctttattggcatctgctgaaattcgtgaaatttgcgcaaacaattatcaatacttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118690 caatctttattggcatctgctgaaattcgtgaaatttgcgcaaacaattatcaatacttg 118631
Query: 121 gtaccaagaaatggtgcaccacttagaggtttaattcaagatcatattttaaccggtgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118630 gtaccaagaaatggtgcaccacttagaggtttaattcaagatcatattttaaccggtgta 118571
Query: 181 cttttaaccaaacgtgatactctctttaccaaagccgatttccaagcaattctctatgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118570 cttttaaccaaacgtgatactctctttaccaaagccgatttccaagcaattctctatgca 118511
Query: 241 tcttgttggtctgtcaatactaaacatccaattgttacaccaccaccatgtattttaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118510 tcttgttggtctgtcaatactaaacatccaattgttacaccaccaccatgtattttaaaa 118451
Query: 301 ccagttccattatggtcaggtaaacaattgattagtgctgctttgaatcaacttacaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118450 ccagttccattatggtcaggtaaacaattgattagtgctgctttgaatcaacttacaatt 118391
Query: 361 ggtcgtgctccattgaatttagaggcaccatcaaaaattccaactaaaatgtggggtac 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118390 ggtcgtgctccattgaatttagaggcaccatcaaaaattccaactaaaatgtggggtac 118332
Score = 52.0 bits (26), Expect(2) = 0.0
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 2018 aaaatacttctcaacaacaaccatca 2043
||||||||||||||||||||||||||
Sbjct: 116529 aaaatacttctcaacaacaaccatca 116504
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,315,236,467
Number of extensions: 132229167
Number of successful extensions: 10373806
Number of sequences better than 10.0: 474
Length of query: 2043
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 2019
Effective length of database: 97,308,875,965
Effective search space: 196466620573335
Effective search space used: 196466620573335
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)
|
| protein update |
2009. 6.30 |
| Homology vs Protein |
Query= Contig-U11617-1 (Contig-U11617-1Q) /CSM_Contig/Contig-U11617-1Q.Seq.d
(2043 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE017344_305(AE017344|pid:none) Cryptococcus neoformans var. neo... 335 e-125
AY490547_1(AY490547|pid:none) Cycas revoluta RNA polymerase I la... 346 e-123
AM454997_1(AM454997|pid:none) Vitis vinifera contig VV78X022173.... 328 e-123
X14783_1(X14783|pid:none) Fission yeast DNA for nuc1 gene for RN... 335 e-122
CP001331_358(CP001331|pid:none) Micromonas sp. RCC299 chromosome... 311 e-120
FN392320_919(FN392320|pid:none) Pichia pastoris GS115 chromosome... 324 e-119
AE016817_773(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 323 e-118
CU928168_63(CU928168|pid:none) Kluyveromyces thermotolerans stra... 317 e-118
BC166364_1(BC166364|pid:none) Xenopus tropicalis hypothetical pr... 320 e-117
AC148348_11(AC148348|pid:none) Medicago truncatula clone mth2-28... 311 e-117
BC034785_1(BC034785|pid:none) Mus musculus polymerase (RNA) I po... 318 e-117
AK160785_1(AK160785|pid:none) Mus musculus 14, 17 days embryo he... 318 e-117
BC053744_1(BC053744|pid:none) Mus musculus polymerase (RNA) I po... 318 e-116
AF000938_1(AF000938|pid:none) Mus musculus RNA polymerase I larg... 318 e-116
AK082883_1(AK082883|pid:none) Mus musculus 7 days embryo whole b... 318 e-116
BC010254_1(BC010254|pid:none) Mus musculus polymerase (RNA) I po... 318 e-116
AK160970_1(AK160970|pid:none) Mus musculus 15 days embryo head c... 318 e-116
AY490540_1(AY490540|pid:none) Podocarpus macrophyllus RNA polyme... 331 e-116
BC143345_1(BC143345|pid:none) Homo sapiens polymerase (RNA) I po... 320 e-116
(O95602) RecName: Full=DNA-directed RNA polymerase I subunit RPA... 320 e-116
AK294447_1(AK294447|pid:none) Homo sapiens cDNA FLJ56651 complet... 320 e-116
AL049660_15(AL049660|pid:none) Arabidopsis thaliana DNA chromoso... 304 e-116
(P10964) RecName: Full=DNA-directed RNA polymerase I subunit RPA... 314 e-116
J03530_1(J03530|pid:none) Yeast (S.cerevisiae) RNA polymerase A(... 314 e-116
(O54889) RecName: Full=DNA-directed RNA polymerase I subunit RPA... 318 e-116
CU928176_188(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 310 e-116
AF309686_1(AF309686|pid:none) Xenopus laevis RNA polymerase I la... 318 e-116
CR858883_1(CR858883|pid:none) Pongo abelii mRNA; cDNA DKFZp469F0... 318 e-115
CP000501_67(CP000501|pid:none) Pichia stipitis CBS 6054 chromoso... 309 e-115
BC073968_1(BC073968|pid:none) Homo sapiens polymerase (RNA) I po... 315 e-115
CU638744_169(CU638744|pid:none) Podospora anserina genomic DNA c... 313 e-115
FM992688_983(FM992688|pid:none) Candida dubliniensis CD36 chromo... 314 e-114
AY490541_1(AY490541|pid:none) Taxus canadensis RNA polymerase I ... 331 e-113
AY490544_1(AY490544|pid:none) Amborella trichopoda RNA polymeras... 316 e-111
AY490543_1(AY490543|pid:none) Ephedra viridis RNA polymerase I l... 311 e-110
AP007161_408(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 296 e-109
AE013599_2012(AE013599|pid:none) Drosophila melanogaster chromos... 298 e-109
(P91875) RecName: Full=DNA-directed RNA polymerase I subunit RPA... 298 e-109
AM270171_5(AM270171|pid:none) Aspergillus niger contig An08c0160... 292 e-109
T13803(T13803) DNA-directed RNA polymerase (EC 2.7.7.6) I large ... 297 e-109
AL032648_1(AL032648|pid:none) Caenorhabditis elegans YAC Y54G9A,... 279 e-102
AK304131_1(AK304131|pid:none) Homo sapiens cDNA FLJ58792 complet... 320 3e-94
FN357313_47(FN357313|pid:none) Schistosoma mansoni genome sequen... 243 8e-91
CR954214_110(CR954214|pid:none) Ostreococcus tauri strain OTTH05... 326 2e-87
AM502234_141(AM502234|pid:none) Leishmania infantum chromosome 16. 217 4e-81
CP000882_26(CP000882|pid:none) Hemiselmis andersenii chromosome ... 204 3e-70
DQ294611_1(DQ294611|pid:none) Neocallimastix sp. GE13 isolate AF... 181 1e-67
FM992695_931(FM992695|pid:none) Candida dubliniensis CD36 chromo... 179 5e-64
DQ294600_1(DQ294600|pid:none) Boothiomyces macroporosum isolate ... 180 6e-64
DQ294582_1(DQ294582|pid:none) Rozella allomycis isolate AFTOL-ID... 181 6e-64
CP000590_138(CP000590|pid:none) Ostreococcus lucimarinus CCE9901... 179 8e-64
DQ294594_1(DQ294594|pid:none) Coemansia reversa isolate AFTOL-ID... 176 1e-63
X52494_1(X52494|pid:none) Arabidopsis thaliana RPB1 gene for the... 187 3e-63
JDMU1(T04690;S12071;S27346;S11960)DNA-directed RNA polymerase (E... 187 3e-63
DQ294589_1(DQ294589|pid:none) Basidiobolus ranarum isolate AFTOL... 176 3e-63
AY490550_1(AY490550|pid:none) Thuja occidentalis RNA polymerase ... 184 3e-63
CR382133_628(CR382133|pid:none) Debaryomyces hansenii chromosome... 176 4e-63
(P36594) RecName: Full=DNA-directed RNA polymerase II subunit rp... 184 5e-63
AY490551_1(AY490551|pid:none) Taxus canadensis RNA polymerase II... 183 5e-63
DQ223185_1(DQ223185|pid:none) Glaucocystis nostochinearum strain... 182 7e-63
EU543186_1(EU543186|pid:none) Illicium parviflorum RNA polymeras... 182 7e-63
DQ294584_1(DQ294584|pid:none) Polychytrium aggregatum isolate AF... 174 9e-63
AY490552_1(AY490552|pid:none) Podocarpus macrophyllus RNA polyme... 182 9e-63
AF519535_1(AF519535|pid:none) Cycas revoluta RNA polymerase II l... 180 9e-63
X52954_1(X52954|pid:none) Arabidopsis thaliana rpII gene for RNA... 185 1e-62
EU543183_1(EU543183|pid:none) Beta vulgaris RNA polymerase II la... 181 2e-62
DQ294587_1(DQ294587|pid:none) Cladochytrium replicatum isolate A... 171 2e-62
BT031343_1(BT031343|pid:none) Drosophila melanogaster RE30267 fu... 173 3e-62
EU543184_1(EU543184|pid:none) Ceratophyllum demersum RNA polymer... 181 3e-62
AF519539_1(AF519539|pid:none) Magnolia x soulangeana RNA polymer... 181 3e-62
AC012511_1(AC012511|pid:none) Homo sapiens BAC clone RP11-548P2 ... 242 3e-62
AF315823_1(AF315823|pid:none) Stylonychia mytilus DNA-dependent ... 175 3e-62
AF519537_1(AF519537|pid:none) Welwitschia mirabilis RNA polymera... 184 3e-62
DQ294602_1(DQ294602|pid:none) Paraglomus occultum isolate AFTOL-... 171 3e-62
DQ294605_1(DQ294605|pid:none) Synchytrium macrosporum isolate AF... 171 3e-62
CR382129_619(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 176 6e-62
CR382126_220(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 173 6e-62
FJ358405_1(FJ358405|pid:none) Arachnomyces glareosus isolate CBS... 176 6e-62
AF395110_1(AF395110|pid:none) Naegleria gruberi RNA polymerase I... 179 7e-62
AY490554_1(AY490554|pid:none) Ephedra viridis RNA polymerase II ... 179 7e-62
AF315820_1(AF315820|pid:none) Glaucosphaera vacuolata DNA-depend... 175 1e-61
CP000575_790(CP000575|pid:none) Staphylothermus marinus F1, comp... 173 1e-61
I38186(I38186) RNA polymerase II largest subunit - human &X7487... 174 1e-61
(P24928) RecName: Full=DNA-directed RNA polymerase II subunit RP... 174 1e-61
(P08775) RecName: Full=DNA-directed RNA polymerase II subunit RP... 174 1e-61
D87293_1(D87293|pid:none) Cricetulus griseus mRNA for RNA polyme... 174 1e-61
U37500_1(U37500|pid:none) Mus musculus RNA polymerase II largest... 174 1e-61
A28490(A28490;A23566) DNA-directed RNA polymerase (EC 2.7.7.6) I... 174 1e-61
AF519541_1(AF519541|pid:none) Amborella trichopoda RNA polymeras... 178 1e-61
AM183921_1(AM183921|pid:none) Geosiphon pyriformis partial RPB1 ... 171 1e-61
AP008211_298(AP008211|pid:none) Oryza sativa (japonica cultivar-... 177 2e-61
AC084218_10(AC084218|pid:none) Oryza sativa (japonica cultivar-g... 177 2e-61
AF315819_1(AF315819|pid:none) Botryocladia uvarioides DNA-depend... 176 2e-61
EU543189_1(EU543189|pid:none) Papaver orientale RNA polymerase I... 178 2e-61
U90037_1(U90037|pid:none) Limulus polyphemus RNA polymerase II l... 175 2e-61
EU543188_1(EU543188|pid:none) Nicotiana tabacum RNA polymerase I... 179 2e-61
CR380955_154(CR380955|pid:none) Candida glabrata strain CBS138 c... 170 3e-61
T34157(T34157)hypothetical protein C42D4.8 - Caenorhabditis eleg... 160 3e-61
AF519538_1(AF519538|pid:none) Zea mays RNA polymerase II largest... 176 3e-61
EF689793_1(EF689793|pid:none) Verrucaria dufourii isolate AFTOL-... 179 3e-61
CP000493_1514(CP000493|pid:none) Hyperthermus butylicus DSM 5456... 171 3e-61
FJ358404_1(FJ358404|pid:none) Arachniotus littoralis isolate CBS... 174 4e-61
DQ020644_1(DQ020644|pid:none) Lycopersicon esculentum RNA polyme... 179 4e-61
AF138996_1(AF138996|pid:none) Nebalia hessleri RNA polymerase II... 178 4e-61
EU543192_1(EU543192|pid:none) Saruma henryi RNA polymerase II la... 176 5e-61
AF315822_1(AF315822|pid:none) Monoblepharis macrandra DNA-depend... 175 6e-61
(O14802) RecName: Full=DNA-directed RNA polymerase III subunit R... 159 6e-61
AF021351_1(AF021351|pid:none) Homo sapiens RNA polymerase III la... 159 6e-61
DQ294595_1(DQ294595|pid:none) Mortierella verticillata isolate A... 171 6e-61
BC151002_1(BC151002|pid:none) Mus musculus polymerase (RNA) III ... 159 8e-61
(A4IF62) RecName: Full=DNA-directed RNA polymerase III subunit R... 159 8e-61
AF519542_1(AF519542|pid:none) Psilotum nudum RNA polymerase II l... 174 8e-61
DQ294585_1(DQ294585|pid:none) Hyaloraphidium curvatum isolate AF... 176 1e-60
Y18879_1(Y18879|pid:none) Drosophila pseudoobscura RpII215 gene. 169 1e-60
FJ358409_1(FJ358409|pid:none) Chromocleista malachitea isolate C... 170 1e-60
T43026(T43026) probable DNA-directed RNA polymerase (EC 2.7.7.6)... 173 2e-60
T43217(T43217) RNA polymerase (EC 2.7.7.-) II, largest chain - P... 169 2e-60
AY168016_1(AY168016|pid:none) Gregarina niphandrodes DNA-depende... 176 2e-60
DQ782860_1(DQ782860|pid:none) Acarospora laqueata isolate AFTOL-... 172 2e-60
AF519540_1(AF519540|pid:none) Nymphaea odorata RNA polymerase II... 177 2e-60
DQ840558_1(DQ840558|pid:none) Pyrenula pseudobufonia isolate AFT... 176 2e-60
EF689744_1(EF689744|pid:none) Bagliettoa baldensis isolate AFTOL... 177 2e-60
DQ294604_1(DQ294604|pid:none) Scutellospora heterogama isolate A... 163 2e-60
DQ973052_1(DQ973052|pid:none) Ophioparma lapponica isolate AFTOL... 171 2e-60
FN392321_582(FN392321|pid:none) Pichia pastoris GS115 chromosome... 167 3e-60
(Q5ZL98) RecName: Full=DNA-directed RNA polymerase III subunit R... 157 3e-60
FJ358410_1(FJ358410|pid:none) Eremascus albus isolate CBS 975.69... 169 3e-60
EF689809_1(EF689809|pid:none) Bagliettoa steineri isolate AFTOL-... 175 3e-60
DQ020643_1(DQ020643|pid:none) Antirrhinum majus RNA polymerase I... 175 3e-60
(P04050) RecName: Full=DNA-directed RNA polymerase II subunit RP... 168 4e-60
DQ782828_1(DQ782828|pid:none) Pertusaria dactylina isolate AFTOL... 170 4e-60
EU543182_1(EU543182|pid:none) Asparagus officinalis RNA polymera... 171 4e-60
EF689776_1(EF689776|pid:none) Endocarpon diffractellum isolate A... 175 4e-60
D72571(D72571)probable DNA-directed RNA polymerase subunit A' AP... 165 4e-60
BA000002_1215(BA000002|pid:none) Aeropyrum pernix K1 DNA, comple... 165 4e-60
DQ782853_1(DQ782853|pid:none) Agonimia sp. AFTOL 684 RNA polymer... 175 5e-60
DQ782858_1(DQ782858|pid:none) Pleopsidium chlorophanum isolate A... 170 5e-60
FJ358400_1(FJ358400|pid:none) Chaetothyriales sp. TRN531 RNA pol... 169 5e-60
AB095187_1(AB095187|pid:none) Cyanidioschyzon merolae gene for D... 171 7e-60
DQ294590_1(DQ294590|pid:none) Entomophthora muscae isolate AFTOL... 167 7e-60
DQ912356_1(DQ912356|pid:none) Cetraria islandica isolate AFTOL-I... 172 7e-60
DQ912374_1(DQ912374|pid:none) Degelia plumbea isolate AFTOL-ID 1... 174 7e-60
EF689807_1(EF689807|pid:none) Verrucaria polysticta isolate AFTO... 175 7e-60
EF689749_1(EF689749|pid:none) Clavascidium umbrinum isolate AFTO... 173 7e-60
DQ986831_1(DQ986831|pid:none) Psora rubiformis isolate AFTOL 219... 169 7e-60
AF138973_1(AF138973|pid:none) Ctenolepisma lineata RNA polymeras... 170 7e-60
FJ358411_1(FJ358411|pid:none) Gymnoascus reesii isolate CBS 259.... 170 7e-60
DQ883739_1(DQ883739|pid:none) Lobariella pallida isolate AFTOL-I... 171 9e-60
EF689795_1(EF689795|pid:none) Verrucaria fuscella isolate AFTOL-... 174 9e-60
U90210_1(U90210|pid:none) Spirogyra sp. RNA polymerase II larges... 177 9e-60
CU928180_82(CU928180|pid:none) Kluyveromyces thermotolerans stra... 170 1e-59
(Q86AQ5) RecName: Full=DNA-directed RNA polymerase III subunit r... 163 1e-59
EF689817_1(EF689817|pid:none) Verrucula granulosaria isolate AFT... 173 1e-59
EF689772_1(EF689772|pid:none) Placopyrenium bucekii isolate AFTO... 173 1e-59
EF689765_1(EF689765|pid:none) Placidium lacinulatum isolate AFTO... 174 1e-59
DQ840552_1(DQ840552|pid:none) Endocarpon pallidulum isolate AFTO... 174 1e-59
EF689756_1(EF689756|pid:none) Endocarpon pusillum isolate AFTOL-... 174 1e-59
EF689759_1(EF689759|pid:none) Neocatapyrenium rhizinosum isolate... 174 1e-59
EF689775_1(EF689775|pid:none) Staurothele areolata isolate AFTOL... 174 1e-59
EF689771_1(EF689771|pid:none) Placopyrenium bucekii1 isolate AFT... 172 1e-59
FJ358366_1(FJ358366|pid:none) Cladophialophora carrionii isolate... 169 1e-59
U90041_1(U90041|pid:none) Pedetontus saltator RNA polymerase II ... 169 1e-59
DQ912369_1(DQ912369|pid:none) Phaeophyscia orbicularis isolate A... 170 2e-59
EF689751_1(EF689751|pid:none) Dermatocarpon luridum isolate AFTO... 173 2e-59
EF689787_1(EF689787|pid:none) Verrucaria canella isolate AFTOL-I... 172 2e-59
EF689781_1(EF689781|pid:none) Thelidium decipiens isolate AFTOL-... 173 2e-59
A64430(A64430)DNA-directed RNA polymerase (EC 2.7.7.6) subunit A... 182 3e-59
(Q58445) RecName: Full=DNA-directed RNA polymerase subunit A'; ... 182 3e-59
EF413602_1(EF413602|pid:none) Polyblastia melaspora isolate AFTO... 173 3e-59
EF689821_1(EF689821|pid:none) Verrucula inconnexaria isolate AFT... 173 3e-59
EF689770_1(EF689770|pid:none) Placocarpus schaereri isolate AFTO... 173 3e-59
EF689796_1(EF689796|pid:none) Verrucaria hochstetteri isolate AF... 173 3e-59
EF689820_1(EF689820|pid:none) Verrucula inconnexaria isolate AFT... 173 3e-59
AF139008_1(AF139008|pid:none) Speleonectes tulumensis RNA polyme... 168 3e-59
FJ358416_1(FJ358416|pid:none) Xeromyces bisporus isolate CBS 236... 167 3e-59
EF689780_1(EF689780|pid:none) Staurothele immersa isolate AFTOL-... 173 3e-59
EF689755_1(EF689755|pid:none) Endocarpon psorodeum isolate AFTOL... 173 3e-59
EF689753_1(EF689753|pid:none) Endocarpon adscendens isolate AFTO... 173 3e-59
DQ883737_1(DQ883737|pid:none) Pseudocyphellaria anomala isolate ... 168 3e-59
DQ912363_1(DQ912363|pid:none) Platismatia glauca isolate AFTOL-I... 169 3e-59
AM269986_4(AM269986|pid:none) Aspergillus niger contig An01c0390... 168 4e-59
U10331_1(U10331|pid:none) Artemia salina RNA polymerase II, larg... 168 4e-59
DQ912355_1(DQ912355|pid:none) Lecidea fuscoatra isolate AFTOL-ID... 167 4e-59
DQ782831_1(DQ782831|pid:none) Umbilicaria mammulata isolate AFTO... 167 4e-59
EF689792_1(EF689792|pid:none) Verrucaroa dolosa isolate AFTOL-ID... 174 4e-59
FJ358363_1(FJ358363|pid:none) Capronia sp. WUC 315 RNA polymeras... 171 4e-59
CP000505_285(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 162 4e-59
EF689747_1(EF689747|pid:none) Catapyrenium cinereum isolate AFTO... 172 4e-59
EF689783_1(EF689783|pid:none) Thelidium incavatum isolate AFTOL-... 172 6e-59
EF689815_1(EF689815|pid:none) Verrucula biatorinaria isolate AFT... 170 6e-59
FJ358358_1(FJ358358|pid:none) Capronia semiimmersa isolate AFTOL... 167 6e-59
EF689800_1(EF689800|pid:none) Verrucaria lecideoides isolate AFT... 172 6e-59
EF689769_1(EF689769|pid:none) Placidium sp. isolate AFTOL-ID 223... 171 6e-59
EF689768_1(EF689768|pid:none) Placidium squamulosum isolate AFTO... 172 6e-59
DQ782854_1(DQ782854|pid:none) Hypocenomyce scalaris isolate AFTO... 165 7e-59
EF689813_1(EF689813|pid:none) Verrucaria tristis isolate AFTOL-I... 171 7e-59
DQ973053_1(DQ973053|pid:none) Asahinea scholanderi isolate AFTOL... 168 7e-59
FJ772242_1(FJ772242|pid:none) Opegrapha varia strain AFTOL881 RN... 167 7e-59
FJ772241_1(FJ772241|pid:none) Arthonia caesia strain AFTOL775 RN... 164 7e-59
EF689784_1(EF689784|pid:none) Thelidium papulare isolate AFTOL-I... 171 1e-58
EF689805_1(EF689805|pid:none) Verrucaria muralis isolate AFTOL-I... 171 1e-58
AY857979_1(AY857979|pid:none) Calostoma cinnabarinum isolate AFT... 172 1e-58
AF240896_1(AF240896|pid:none) Bothropolys multidentatus RNA poly... 165 1e-58
CP000883_120(CP000883|pid:none) Hemiselmis andersenii chromosome... 180 1e-58
EF689798_1(EF689798|pid:none) Verrucaria hydrela isolate AFTOL-I... 171 1e-58
EF689782_1(EF689782|pid:none) Thelidium decipiens isolate AFTOL-... 171 1e-58
AF240893_1(AF240893|pid:none) Abacion magnum RNA polymerase II l... 164 1e-58
AB173155_1(AB173155|pid:none) Macaca fascicularis brain cDNA clo... 230 1e-58
DQ883744_1(DQ883744|pid:none) Anaptychia palmatula isolate AFTOL... 167 2e-58
EF689761_1(EF689761|pid:none) Placidiopsis cinerascens isolate A... 171 2e-58
DQ973050_1(DQ973050|pid:none) Cetradonia sp. AFTOL 1657 RNA poly... 167 2e-58
FJ358367_1(FJ358367|pid:none) Cladophialophora minourae isolate ... 166 2e-58
AJ278949_1(AJ278949|pid:none) Cystosporogenes operophterae parti... 162 2e-58
DQ973068_1(DQ973068|pid:none) Xanthoria elegans isolate AFTOL-ID... 167 2e-58
AF083338_1(AF083338|pid:none) Breviata anathema DNA-dependent RN... 163 2e-58
(Q8SSC4) RecName: Full=DNA-directed RNA polymerase II subunit RP... 169 2e-58
DQ973049_1(DQ973049|pid:none) Myelochroa aurulenta isolate AFTOL... 169 2e-58
DQ912359_1(DQ912359|pid:none) Hypotrachyna degelii isolate AFTOL... 167 2e-58
EF689758_1(EF689758|pid:none) Heteroplacidium imbricatum isolate... 168 3e-58
FJ358361_1(FJ358361|pid:none) Capronia sp. WUC 102 RNA polymeras... 167 3e-58
DQ912358_1(DQ912358|pid:none) Hypotrachyna caraccensis isolate A... 166 3e-58
FJ358398_1(FJ358398|pid:none) Chaetothyriales sp. TRN508 RNA pol... 167 3e-58
FN357492_16(FN357492|pid:none) Schistosoma mansoni genome sequen... 165 4e-58
DQ912364_1(DQ912364|pid:none) Punctelia hypoleucites isolate AFT... 164 4e-58
EF689803_1(EF689803|pid:none) Verrucaria maura isolate AFTOL-ID ... 169 4e-58
DQ986850_1(DQ986850|pid:none) Aspicilia cinerea isolate AFTOL 64... 164 4e-58
CR940352_164(CR940352|pid:none) Theileria annulata strain Ankara... 172 5e-58
EF689804_1(EF689804|pid:none) Verrucaria mucosa isolate AFTOL-ID... 172 5e-58
DQ883741_1(DQ883741|pid:none) Heterodermia vulgaris isolate AFTO... 165 5e-58
FJ358388_1(FJ358388|pid:none) Chaetothyriales sp. TRN210 RNA pol... 167 5e-58
DQ782820_1(DQ782820|pid:none) Physcia aipolia isolate AFTOL-ID 8... 167 6e-58
FJ358407_1(FJ358407|pid:none) Ascosphaera colubrina isolate CBS ... 166 6e-58
FN392322_309(FN392322|pid:none) Pichia pastoris GS115 chromosome... 160 8e-58
DQ912354_1(DQ912354|pid:none) Candelariella reflexa isolate AFTO... 167 8e-58
FJ358360_1(FJ358360|pid:none) Capronia sp. WUC 26 RNA polymerase... 167 8e-58
AY305591_1(AY305591|pid:none) Neogonodactylus oerstedii clone Ne... 166 8e-58
(P35074) RecName: Full=DNA-directed RNA polymerase II subunit RP... 160 1e-57
DQ782817_1(DQ782817|pid:none) Canoparmelia caroliniana isolate A... 164 1e-57
DQ840557_1(DQ840557|pid:none) Ramichloridium anceps isolate AFTO... 167 1e-57
FJ387016_1(FJ387016|pid:none) Trichoplax adhaerens RNA polymeras... 163 1e-57
DQ782825_1(DQ782825|pid:none) Roccella fuciformis isolate AFTOL-... 162 1e-57
DQ294586_1(DQ294586|pid:none) Spizellomyces punctatus isolate AF... 155 1e-57
DQ986829_2(DQ986829|pid:none) Porpidia speirea isolate AFTOL 105... 166 1e-57
A34092(A34092) DNA-directed RNA polymerase (EC 2.7.7.6) II large... 159 2e-57
DQ996233_1(DQ996233|pid:none) Nosema granulosis RNA polymerase I... 161 2e-57
DQ840555_1(DQ840555|pid:none) Exophiala dermatitidis isolate AFT... 166 2e-57
U10334_1(U10334|pid:none) Crassostrea gigas RNA polymerase II la... 164 3e-57
DQ782827_1(DQ782827|pid:none) Mycoblastus sanguinarius isolate A... 167 3e-57
EF689812_1(EF689812|pid:none) Verrucaria weddellii isolate AFTOL... 169 3e-57
CP001399_1862(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 162 3e-57
EF413605_1(EF413605|pid:none) Capronia munkii isolate AFTOL-ID 6... 167 4e-57
FJ358394_1(FJ358394|pid:none) Chaetothyriales sp. TRN488 RNA pol... 167 4e-57
AM910994_236(AM910994|pid:none) Plasmodium knowlesi strain H chr... 160 5e-57
FM992691_623(FM992691|pid:none) Candida dubliniensis CD36 chromo... 160 5e-57
FJ515665_1(FJ515665|pid:none) Sulfolobus shibatae B12 RNA polyme... 161 5e-57
AY305615_1(AY305615|pid:none) Scutigerella sp. Scu3 RNA polymera... 160 5e-57
DQ782819_1(DQ782819|pid:none) Simonyella variegata isolate AFTOL... 158 7e-57
CR932237_1(CR932237|pid:none) DNA-directed RNA polymerase II lar... 155 9e-57
AY137579_1(AY137579|pid:none) Trypanosoma cruzi TcPolIILSUB RNA ... 151 9e-57
AF372503_1(AF372503|pid:none) Trypanosoma cruzi TcPolIILSUA RNA ... 151 9e-57
FJ358397_1(FJ358397|pid:none) Chaetothyriales sp. TRN506 RNA pol... 166 9e-57
CP001402_1886(CP001402|pid:none) Sulfolobus islandicus M.16.4, c... 160 9e-57
DQ782857_1(DQ782857|pid:none) Lichinella iodopulchra isolate AFT... 158 1e-56
EF413629_1(EF413629|pid:none) Ceramothyrium carniolicum RNA poly... 157 1e-56
FJ358364_1(FJ358364|pid:none) Ceramothyrium carniolicum isolate ... 157 1e-56
CP000582_96(CP000582|pid:none) Ostreococcus lucimarinus CCE9901 ... 154 1e-56
A31494(A31494)DNA-directed RNA polymerase (EC 2.7.7.6) IIA - Try... 150 2e-56
B31494(B31494)DNA-directed RNA polymerase (EC 2.7.7.6) IIB - Try... 150 2e-56
(P17546) RecName: Full=DNA-directed RNA polymerase II subunit RP... 150 2e-56
J04841_1(J04841|pid:none) T.brucei RNA polymerase IIB largest su... 150 2e-56
CP000682_34(CP000682|pid:none) Metallosphaera sedula DSM 5348, c... 158 2e-56
FJ358377_1(FJ358377|pid:none) Exophiala xenobiotica isolate CBS ... 164 2e-56
AE016818_594(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 157 3e-56
AP007167_530(AP007167|pid:none) Aspergillus oryzae RIB40 genomic... 155 3e-56
FJ358392_1(FJ358392|pid:none) Chaetothyriales sp. TRN475 RNA pol... 164 3e-56
AL844509_288(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 159 4e-56
DQ996236_1(DQ996236|pid:none) Vairimorpha necatrix RNA polymeras... 166 4e-56
AF138971_1(AF138971|pid:none) Semibalanus balanoides RNA polymer... 159 4e-56
(P04051) RecName: Full=DNA-directed RNA polymerase III subunit R... 155 6e-56
FN357485_10(FN357485|pid:none) Schistosoma mansoni genome sequen... 161 7e-56
DQ782823_1(DQ782823|pid:none) Echinoplaca strigulacea isolate AF... 158 7e-56
AF139013_1(AF139013|pid:none) Tanystylum orbiculare RNA polymera... 160 1e-55
CP000852_180(CP000852|pid:none) Caldivirga maquilingensis IC-167... 158 2e-55
CP001014_1921(CP001014|pid:none) Thermoproteus neutrophilus V24S... 156 2e-55
AF060234_1(AF060234|pid:none) Vairimorpha necatrix largest subun... 163 2e-55
AF395111_1(AF395111|pid:none) Ochromonas danica RNA polymerase I... 156 3e-55
X14818_4(X14818|pid:none) Sulfolobus acidocaldarius rpoB, rpoA a... 162 3e-55
(P11512) RecName: Full=DNA-directed RNA polymerase subunit A'; ... 162 3e-55
DQ996235_1(DQ996235|pid:none) Vairimorpha cheracis RNA polymeras... 162 4e-55
A45597(A45597)DNA-directed RNA polymerase (EC 2.7.7.6) III large... 159 5e-55
(P27625) RecName: Full=DNA-directed RNA polymerase III subunit R... 159 5e-55
AF126254_1(AF126254|pid:none) Leishmania donovani RNA polymerase... 144 6e-55
DQ996231_1(DQ996231|pid:none) Nosema bombycis RNA polymerase II ... 162 6e-55
CU928178_415(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 152 8e-55
DQ996234_1(DQ996234|pid:none) Nosema trichoplusiae RNA polymeras... 160 1e-54
CP001140_1371(CP001140|pid:none) Desulfurococcus kamchatkensis 1... 149 1e-54
CT005268_264(CT005268|pid:none) Leishmania major strain Friedlin... 143 2e-54
AM502249_329(AM502249|pid:none) Leishmania infantum chromosome 31. 143 2e-54
AM494968_295(AM494968|pid:none) Leishmania braziliensis chromoso... 142 3e-54
CP000660_2249(CP000660|pid:none) Pyrobaculum arsenaticum DSM 135... 154 3e-54
DQ883743_1(DQ883743|pid:none) Coccocarpia erythroxyli isolate AF... 150 7e-54
CP000504_696(CP000504|pid:none) Pyrobaculum islandicum DSM 4184,... 152 9e-54
AE017346_41(AE017346|pid:none) Cryptococcus neoformans var. neof... 140 1e-53
EF689754_1(EF689754|pid:none) Endocarpon petrolepideum isolate A... 171 1e-53
AF338253_1(AF338253|pid:none) Leptomonas seymouri RNA polymerase... 139 2e-53
(P08968) RecName: Full=DNA-directed RNA polymerase III subunit R... 145 2e-53
U90042_1(U90042|pid:none) Scutigera coleoptrata RNA polymerase I... 170 2e-53
AE009950_1563(AE009950|pid:none) Pyrococcus furiosus DSM 3638, c... 156 2e-53
A34374(A34374;S19264;S04272;S06857) DNA-directed RNA polymerase ... 211 6e-53
FJ032636_10(FJ032636|pid:none) Oryza coarctata clone a0295K14 Mo... 211 8e-53
CP000254_49(CP000254|pid:none) Methanospirillum hungatei JF-1, c... 163 2e-52
AM502252_38(AM502252|pid:none) Leishmania infantum chromosome 34. 136 2e-52
AM494957_33(AM494957|pid:none) Leishmania braziliensis chromosom... 135 3e-52
CT005271_37(CT005271|pid:none) Leishmania major strain Friedlin,... 135 4e-52
(P41556) RecName: Full=DNA-directed RNA polymerase subunit A'; ... 167 4e-52
AM114193_2852(AM114193|pid:none) Uncultured methanogenic archaeo... 159 4e-52
AB025334_1(AB025334|pid:none) Lethenteron reissneri mRNA for RNA... 157 4e-52
AK120935_1(AK120935|pid:none) Oryza sativa Japonica Group cDNA c... 145 8e-52
DQ294596_1(DQ294596|pid:none) Rhopalomyces elegans isolate AFTOL... 134 1e-51
CR932236_1(CR932236|pid:none) DNA-directed RNA polymerase III la... 145 2e-51
BX950229_1363(BX950229|pid:none) Methanococcus maripaludis strai... 158 3e-51
CP000743_779(CP000743|pid:none) Methanococcus aeolicus Nankai-3,... 161 4e-51
EU016635_42(EU016635|pid:none) Uncultured Group I marine crenarc... 151 5e-51
(P31813) RecName: Full=DNA-directed RNA polymerase subunit A'; ... 149 6e-51
CP000477_29(CP000477|pid:none) Methanosaeta thermophila PT, comp... 162 6e-51
EF413613_2(EF413613|pid:none) Spiromastix warcupii RNA polymeras... 140 1e-50
AY490565_1(AY490565|pid:none) Nymphaea lotus RNA polymerase III ... 157 3e-50
EU016588_36(EU016588|pid:none) Uncultured Group I marine crenarc... 145 9e-50
EU016637_25(EU016637|pid:none) Uncultured Group I marine crenarc... 149 1e-49
EU016631_49(EU016631|pid:none) Uncultured Group I marine crenarc... 148 2e-49
CP000745_602(CP000745|pid:none) Methanococcus maripaludis C7, co... 159 2e-49
CP000559_1152(CP000559|pid:none) Methanocorpusculum labreanum Z,... 148 3e-49
AM180088_2477(AM180088|pid:none) Haloquadratum walsbyi DSM 16790... 151 1e-48
CP001338_2063(CP001338|pid:none) Candidatus Methanosphaerula pal... 149 1e-48
FJ358412_1(FJ358412|pid:none) Leiothecium ellipsoideum isolate C... 177 1e-48
FJ358413_1(FJ358413|pid:none) Leucothecium emdenii isolate CBS 5... 167 4e-48
CP000780_1923(CP000780|pid:none) Candidatus Methanoregula boonei... 146 4e-48
AE010299_1228(AE010299|pid:none) Methanosarcina acetivorans str.... 157 5e-48
CP000562_299(CP000562|pid:none) Methanoculleus marisnigri JR1, c... 149 5e-48
CR940347_416(CR940347|pid:none) Theileria annulata strain Ankara... 194 8e-48
AY490559_1(AY490559|pid:none) Podocarpus macrophyllus RNA polyme... 150 2e-47
BA000011_1207(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA... 143 5e-47
AJ890364_64(AJ890364|pid:none) Emiliania huxleyi virus 86 isolat... 129 9e-47
AY490558_1(AY490558|pid:none) Taxus canadensis RNA polymerase II... 150 2e-46
AY490562_1(AY490562|pid:none) Zamia muricata RNA polymerase III ... 148 3e-46
AF241005_1(AF241005|pid:none) Hadrurus arizonensis RNA polymeras... 172 3e-46
AY864870_1(AY864870|pid:none) Fomitiporia mediterranea isolate A... 189 4e-46
L11172_1(L11172|pid:none) Plasmodium falciparum RNA polymerase I... 189 4e-46
AL844504_93(AL844504|pid:none) Plasmodium falciparum 3D7 chromos... 189 4e-46
AY305616_1(AY305616|pid:none) Skogsbergia lerneri clone SkleApol... 171 4e-46
AY490561_1(AY490561|pid:none) Cycas revoluta RNA polymerase III ... 147 6e-46
AF138978_1(AF138978|pid:none) Eumesocampa frigilis RNA polymeras... 172 6e-46
AY490555_1(AY490555|pid:none) Welwitschia mirabilis RNA polymera... 147 2e-45
AY305604_1(AY305604|pid:none) Podura aquatica clone PaqApol RNA ... 170 2e-45
AY305544_1(AY305544|pid:none) Argulus sp. Arg2 RNA polymerase II... 165 2e-45
(P25202) RecName: Full=DNA-directed RNA polymerase III subunit R... 149 2e-45
S22812(S22812)DNA-directed RNA polymerase (EC 2.7.7.6) III large... 149 2e-45
EU677591_1(EU677591|pid:none) Bembidion umbratum RNA polymerase ... 170 3e-45
EU677589_1(EU677589|pid:none) Bembidion transversale RNA polymer... 170 3e-45
EU677587_1(EU677587|pid:none) Asaphidion yukonense RNA polymeras... 170 3e-45
AF138990_1(AF138990|pid:none) Machiloides banksi RNA polymerase ... 171 3e-45
AJ278951_1(AJ278951|pid:none) Loma acerinae partial rpb1 gene fo... 147 4e-45
AY305589_1(AY305589|pid:none) Mesocyclops edax clone MesoApol RN... 167 4e-45
EU677595_1(EU677595|pid:none) Bembidion inaequale RNA polymerase... 170 5e-45
AY305596_1(AY305596|pid:none) Nicoletia meinerti clone NmeApol R... 171 5e-45
AY305547_1(AY305547|pid:none) Artemia salina clone Asa2Apol RNA ... 168 5e-45
CP000968_1508(CP000968|pid:none) Candidatus Korarchaeum cryptofi... 117 6e-45
EU677584_1(EU677584|pid:none) Macrogyrus oblongus RNA polymerase... 169 6e-45
DQ782821_1(DQ782821|pid:none) Dermatocarpon miniatum isolate AFT... 172 8e-45
EU677585_1(EU677585|pid:none) Amphizoa lecontei RNA polymerase I... 167 8e-45
AY305619_1(AY305619|pid:none) Thereuonema sp. JCR-2003 RNA polym... 170 8e-45
EU677592_1(EU677592|pid:none) Bembidion mandibulare RNA polymera... 171 1e-44
AF139011_1(AF139011|pid:none) Tomocerus sp. 'Tom' RNA polymerase... 169 2e-44
AF139016_1(AF139016|pid:none) Milnesium tardigradum RNA polymera... 172 2e-44
EU677583_1(EU677583|pid:none) Dineutes sublineatus RNA polymeras... 167 3e-44
AF138984_1(AF138984|pid:none) Hutchinsoniella macracantha RNA po... 165 3e-44
AM910992_237(AM910992|pid:none) Plasmodium knowlesi strain H chr... 182 3e-44
AF058710_1(AF058710|pid:none) Dictyostelium discoideum RNA polym... 113 5e-44
AY305572_1(AY305572|pid:none) Libinia emarginata clone LemApol R... 164 7e-44
AY305566_1(AY305566|pid:none) Harbansus paucichelatus clone Hapa... 164 7e-44
EU677578_1(EU677578|pid:none) Sialis sp. ALW-2008 RNA polymerase... 164 1e-43
AY860526_1(AY860526|pid:none) Marasmius alliaceus isolate AFTOL-... 179 3e-43
AY305541_1(AY305541|pid:none) Allopauropus proximus clone AprApo... 164 4e-43
AY305559_1(AY305559|pid:none) Eurypauropus spinosus clone EuryAp... 165 1e-42
AJ010592_77(AJ010592|pid:none) Guillardia theta DNA for complete... 177 1e-42
DQ294578_1(DQ294578|pid:none) Allomyces arbuscula isolate AFTOL-... 102 2e-42
AY485639_1(AY485639|pid:none) Amanita phalloides DNA-dependent R... 176 2e-42
AY305581_1(AY305581|pid:none) Lynceus sp. JCR-2003 RNA polymeras... 162 4e-42
AY305624_1(AY305624|pid:none) Trachyiulus nordquisti clone TnorB... 173 2e-41
DQ294608_1(DQ294608|pid:none) Monoblepharella sp. M15 isolate AF... 108 2e-41
AY305550_1(AY305550|pid:none) Chthamalus fragilis clone CfrApol ... 159 2e-41
U90040_1(U90040|pid:none) Periplaneta americana RNA polymerase I... 172 3e-41
AY305569_1(AY305569|pid:none) Lepas anserifera clone LeanApol RN... 157 4e-41
DQ912375_1(DQ912375|pid:none) Protopannaria pezizoides isolate A... 172 5e-41
DQ883745_1(DQ883745|pid:none) Pyxine subcinerea isolate AFTOL-ID... 171 9e-41
AY305538_1(AY305538|pid:none) Anopsobius neozelandicus clone Ane... 170 2e-40
AJ278952_1(AJ278952|pid:none) Glugea anomala partial rpb1 gene f... 144 2e-40
DQ973059_1(DQ973059|pid:none) Ramalina complanata isolate AFTOL-... 169 3e-40
DQ782829_1(DQ782829|pid:none) Lecanora hybocarpa isolate AFTOL-I... 169 4e-40
AY490545_1(AY490545|pid:none) Nymphaea lotus RNA polymerase I la... 138 6e-40
EU677596_1(EU677596|pid:none) Bembidion integrum RNA polymerase ... 167 1e-39
DQ294588_1(DQ294588|pid:none) Dimargaris bacillispora isolate AF... 96 1e-39
AF138982_1(AF138982|pid:none) Hanseniella sp. 'Han' RNA polymera... 167 1e-39
DQ294580_1(DQ294580|pid:none) Physoderma maydis isolate AFTOL-ID... 96 2e-39
DQ294592_1(DQ294592|pid:none) Glomus mosseae isolate AFTOL-ID 13... 95 4e-39
DQ973056_1(DQ973056|pid:none) Buellia dialyta isolate AFTOL-ID 5... 166 4e-39
AF138977_1(AF138977|pid:none) Eurytemora affinis RNA polymerase ... 153 5e-39
AB077099_1(AB077099|pid:none) Monoblepharella sp. C-4 RPB1 gene ... 107 5e-39
DQ883778_1(DQ883778|pid:none) Flavoparmelia caperata isolate AFT... 165 5e-39
AE017345_374(AE017345|pid:none) Cryptococcus neoformans var. neo... 164 9e-39
DQ206522_1(DQ206522|pid:none) Suberites fuscus isolate TOA15 DNA... 93 3e-38
DQ158856_85(DQ158856|pid:none) Bigelowiella natans nucleomorph c... 111 4e-38
DQ294579_1(DQ294579|pid:none) Coelomomyces stegomyiae isolate AF... 96 5e-38
DQ973061_1(DQ973061|pid:none) Nephroma parile isolate AFTOL-ID 1... 161 7e-38
FJ358380_1(FJ358380|pid:none) Phialophora europaea isolate CBS 1... 160 1e-37
AB077095_1(AB077095|pid:none) Smittium culisetae RPB1 gene for D... 107 1e-37
DQ294607_1(DQ294607|pid:none) Phycomyces blakesleeanus isolate A... 91 9e-37
AB097421_1(AB097421|pid:none) Umbelopsis ramanniana RPB1 gene fo... 115 2e-36
DQ294591_1(DQ294591|pid:none) Conidiobolus coronatus isolate AFT... 95 2e-36
CP000102_1329(CP000102|pid:none) Methanosphaera stadtmanae DSM 3... 156 3e-36
DQ206551_1(DQ206551|pid:none) Leucosolenia sp. AR-2003 isolate T... 94 3e-36
AB097417_1(AB097417|pid:none) Furculomyces boomerangus RPB1 gene... 107 4e-36
AB077098_1(AB077098|pid:none) Mucor mucedo RPB1 gene for DNA-dep... 101 6e-36
GM016639_224(GM016639|pid:none) Sequence 1469 from Patent EP1923... 153 1e-35
EU276085_1(EU276085|pid:none) Chaetoceros muellerii RNA polymera... 94 1e-35
DQ294598_1(DQ294598|pid:none) Umbelopsis ramanniana isolate AFTO... 89 2e-35
AB097420_1(AB097420|pid:none) Cokeromyces recurvatus RPB1 gene f... 104 5e-35
EU276082_1(EU276082|pid:none) Phaeodactylum tricornutum RNA poly... 97 1e-34
AB097418_1(AB097418|pid:none) Dimargaris bacillispora RPB1 gene ... 93 1e-34
X57145_1(X57145|pid:none) H. morrhuae RNA polymerase operon. 150 2e-34
AE000782_1862(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304... 149 3e-34
EU276084_1(EU276084|pid:none) Achnanthes minutissima RNA polymer... 94 3e-34
EU276086_1(EU276086|pid:none) Nitzschia communis RNA polymerase ... 89 4e-34
AB097419_1(AB097419|pid:none) Dimargaris cristalligena RPB1 gene... 101 4e-34
DQ294581_1(DQ294581|pid:none) Rhizoclosmatium sp. JEL347-h isola... 89 7e-34
(A5DCV3) RecName: Full=DNA-directed RNA polymerase II subunit RP... 148 8e-34
AB097413_1(AB097413|pid:none) Kuzuhaea moniliformis RPB1 gene fo... 105 3e-33
AJ278950_1(AJ278950|pid:none) Pleistophora hippoglossoideos part... 146 3e-33
EF564005_1(EF564005|pid:none) Thalassiosira weissflogii RNA poly... 87 7e-33
DQ083405_1(DQ083405|pid:none) Nosema sp. PX1 DNA-dependent RNA p... 144 1e-32
DQ083406_1(DQ083406|pid:none) Nosema plutellae isolate PX2 DNA-d... 144 2e-32
AJ278946_1(AJ278946|pid:none) Pleistophora typicalis partial rpb... 144 2e-32
DQ294606_1(DQ294606|pid:none) Orphella haysii isolate AFTOL-ID 1... 90 2e-32
EF119338_1(EF119338|pid:none) Pleistophora mulleri RNA polymeras... 143 2e-32
AB433782_4(AB433782|pid:none) Haloarcula japonica rpoH, rpoB'', ... 143 2e-32
DQ666959_1(DQ666959|pid:none) Nosema spodopterae DNA-dependent R... 143 3e-32
AM712239_99(AM712239|pid:none) African swine fever virus Benin 9... 97 5e-32
(P0C988) RecName: Full=Probable DNA-directed RNA polymerase subu... 97 5e-32
CP001365_105(CP001365|pid:none) Halorubrum lacusprofundi ATCC 49... 142 5e-32
AB077093_1(AB077093|pid:none) Piptocephalis freseniana RPB1 gene... 99 6e-32
AJ278953_1(AJ278953|pid:none) Pleistophora anguillarum partial r... 142 6e-32
(P0C989) RecName: Full=Probable DNA-directed RNA polymerase subu... 97 8e-32
AJ278945_1(AJ278945|pid:none) Trachipleistophora hominis partial... 137 1e-31
(O27125) RecName: Full=DNA-directed RNA polymerase subunit A'; ... 140 2e-31
(Q03585) RecName: Full=DNA-directed RNA polymerase subunit A'; ... 140 2e-31
EU677581_1(EU677581|pid:none) Scaphinotus petersi RNA polymerase... 139 5e-31
AE017199_490(AE017199|pid:none) Nanoarchaeum equitans Kin4-M, co... 139 5e-31
AJ278956_1(AJ278956|pid:none) Vavraia culicis partial rpb1 gene ... 138 7e-31
(Q9HM79) RecName: Full=DNA-directed RNA polymerase subunit A'; ... 138 7e-31
AE004437_2048(AE004437|pid:none) Halobacterium sp. NRC-1, comple... 138 7e-31
X57144_4(X57144|pid:none) H. halobium RNA polymerase subunit ope... 136 3e-30
AY091461_1(AY091461|pid:none) Homo sapiens RNA polymerase III su... 135 6e-30
AB077091_1(AB077091|pid:none) Emericella nidulans RPB1 gene for ... 89 7e-30
AB092412_1(AB092412|pid:none) Giardia intestinalis gene for RNA ... 132 6e-29
(Q7T6X5) RecName: Full=DNA-directed RNA polymerase subunit 1; ... 130 2e-28
EF068156_1(EF068156|pid:none) Hortaea werneckii putative DNA-dir... 125 8e-27
AM284974_1(AM284974|pid:none) Glomus intraradices partial RPB1 g... 100 9e-26
X13490_1(X13490|pid:none) Crithidia fasciculata crp22 gene fragm... 120 2e-25
S04198(S04198)DNA-directed RNA polymerase (EC 2.7.7.6) II large ... 120 2e-25
AM284979_1(AM284979|pid:none) Glomus proliferum partial RPB1 gen... 98 2e-25
AM284981_1(AM284981|pid:none) Glomus proliferum partial RPB1 gen... 98 8e-25
AF165818_133(AF165818|pid:none) Guillardia theta nucleomorph chr... 117 2e-24
AM284980_1(AM284980|pid:none) Glomus proliferum partial RPB1 gen... 98 2e-24
BC017115_1(BC017115|pid:none) Homo sapiens polymerase (RNA) I po... 116 3e-24
FJ267453_1(FJ267453|pid:none) Fahrenholzia pinnata voucher Fzpin... 115 5e-24
AM284975_1(AM284975|pid:none) Glomus mosseae partial RPB1 gene f... 95 6e-24
AY305638_1(AY305638|pid:none) Macrobiotus islandicus clone MisAp... 99 8e-24
EU153431_1(EU153431|pid:none) Oscheius dolichuroides strain DF50... 114 1e-23
AY310218_1(AY310218|pid:none) Narceus americanus voucher Nam RNA... 100 3e-23
EU153441_1(EU153441|pid:none) Acrobeles maximus RNA polymerase 2... 112 4e-23
AY604469_1(AY604469|pid:none) Prodontorhabditis wirthi strain DF... 112 4e-23
EU153428_1(EU153428|pid:none) Rhabditis sp. SB347 RNA polymerase... 112 4e-23
S75674_3(S75674|pid:none) DNA helicase homolog, DNA-depenent RNA... 112 4e-23
EU153430_1(EU153430|pid:none) Oscheius tipulae strain CEW1 RNA p... 111 1e-22
AY945090_1(AY945090|pid:none) Anthophora montana voucher Anmo633... 91 1e-22
AY945124_1(AY945124|pid:none) Holcopasites ruthae voucher Horu51... 91 1e-22
AY945207_1(AY945207|pid:none) Pseudopanurgus fraterculus voucher... 91 1e-22
AY945092_1(AY945092|pid:none) Andrena brooksi voucher Ansp643 RN... 91 1e-22
AY945130_1(AY945130|pid:none) Leioproctus fimbriatinus voucher L... 91 1e-22
AY945114_1(AY945114|pid:none) Dasypoda visnaga voucher Davi977 R... 91 1e-22
DQ069335_1(DQ069335|pid:none) Lithurgus apicalis RNA polymerase ... 91 1e-22
EU161978_1(EU161978|pid:none) Cuticonema vivipara strain SB179 R... 110 2e-22
AY945142_1(AY945142|pid:none) Melitta leporina voucher Mele981 R... 91 2e-22
AY602187_1(AY602187|pid:none) Caenorhabditis sp. SB341 RNA polym... 110 2e-22
EU161967_1(EU161967|pid:none) Phasmarhabditis sp. EM434 RNA poly... 110 2e-22
AY602183_1(AY602183|pid:none) Rhabditella axei RNA polymerase 2 ... 110 2e-22
EU153420_1(EU153420|pid:none) Pelodera strongyloides dermatitica... 109 3e-22
EU161970_1(EU161970|pid:none) Rhabditis blumi strain DF5010 RNA ... 108 6e-22
AY305652_1(AY305652|pid:none) Thulinia stephaniae clone ThulApol... 96 1e-21
U73451_1(U73451|pid:none) Cruznema tripartitum large subunit RNA... 108 1e-21
>AE017344_305(AE017344|pid:none) Cryptococcus neoformans var.
neoformans JEC21 chromosome 4, complete sequence.
Length = 1727
Score = 335 bits (858), Expect(2) = e-125
Identities = 168/311 (54%), Positives = 221/311 (71%), Gaps = 7/311 (2%)
Frame = +2
Query: 443 DSHVIIRQNEMVAGILDKGHFGASSYGLVHTCYELYDPDVAGSLLTLLGRMFTNYLQSRG 622
+ +VI +V G+LDK +GAS YGLVH+ +ELY P +A LL +L R+ T YLQ
Sbjct: 826 EENVIFLDGHLVCGVLDKSQYGASGYGLVHSVHELYGPYIANRLLGVLSRLLTKYLQHDA 885
Query: 623 FTCGVDDLLMKNKEEKFRVETLKKANEEGYTVAAKFADLSK----YDEQKARDF---FSK 781
F+C +DDL++ + EK R + L KA+ +G A K+ L + D A++ +
Sbjct: 886 FSCRMDDLILTAEGEKIRKDILDKASGDGAIAAMKYVGLPEGSKIEDPDTAKNLAIRLEE 945
Query: 782 ALQSEREVARLDGLLKKGLNQYTSKVIDTLIPGGQQKPFPKNNFSLMTVSGAKGSVVNFS 961
L+ + +A LD +++ N+ TSK+ + ++P +PFP NN +MT+SGAKGS VN S
Sbjct: 946 ILRDDHLMAGLDAVMQSAFNKTTSKINNDVLPDHLVRPFPDNNMQMMTISGAKGSKVNAS 1005
Query: 962 QVSCLLGQQELEGKRVPRMVSGKTLPSFQAYDASARAGGFVMDRFLTGVRPQDYFFHCMA 1141
Q+S LLGQQ LEG+RVP MVSGKTLPSF+A+D SARAGG+V +RFLTG+RPQ+Y+FHCMA
Sbjct: 1006 QISTLLGQQALEGRRVPTMVSGKTLPSFKAFDTSARAGGYVANRFLTGIRPQEYYFHCMA 1065
Query: 1142 GREGLIDTAVKTSRSGYLQRCLIKHLEGLSVQYDNTVRESDGSVIQFNYGEDSLEIGKTP 1321
GREGLIDTAVKTSRSGYLQRCLIKHLEG+ V YD+TVR+SD SV+QF YGEDSL++ K
Sbjct: 1066 GREGLIDTAVKTSRSGYLQRCLIKHLEGVKVHYDHTVRDSDSSVLQFLYGEDSLDVTKQT 1125
Query: 1322 YLTKFPIIAEN 1354
+L KF A N
Sbjct: 1126 HLNKFDFAAAN 1136
Score = 139 bits (349), Expect(2) = e-125
Identities = 67/142 (47%), Positives = 95/142 (66%), Gaps = 4/142 (2%)
Frame = +1
Query: 1 SNCSTYNADFDGDEMNIHFPQSLLASAEIREICANNYQYLVPRNGAPLRGLIQDHILTGV 180
+NC++YNADFDGDEMNIHFPQ+ +A AE + I + QYLVP +G PLRGLIQDH++ GV
Sbjct: 673 ANCNSYNADFDGDEMNIHFPQNEVARAEAQMIANTDNQYLVPTSGGPLRGLIQDHVVAGV 732
Query: 181 LLTKRDTLFTKADFQAILYASCWSVNT---KHPIVTPPPCILKPVPLWSGKQLISAALNQ 351
+ + + FT+ + ++Y + + N + I+T PP I KP PLW+GKQ++S L
Sbjct: 733 WMCNKSSFFTREQYFQLIYGALRTENNYTGRSRIITLPPAIFKPKPLWTGKQIMSTILTN 792
Query: 352 LTIGRAP-LNLEAPSKIPTKMW 414
LT A LNL + +K+ K+W
Sbjct: 793 LTPSNAKGLNLTSRNKVQNKLW 814
Score = 143 bits (361), Expect = 2e-32
Identities = 80/206 (38%), Positives = 121/206 (58%), Gaps = 13/206 (6%)
Frame = +3
Query: 1389 KINEKDFRNLMYLYYSRSMVSPGESVGLLCAQSIGEPSTQMTLNTFHLAGRGEANVTLGI 1568
++ EK+F L Y RS+V PGE+VGLL +Q +GEPSTQMTLNTFHLAG G ANVTLGI
Sbjct: 1222 RVPEKEFLGLARARYMRSLVEPGEAVGLLASQGVGEPSTQMTLNTFHLAGHGAANVTLGI 1281
Query: 1569 PRLRELIMTATTKPITPLMEFQINDSTNKVETEKMAKYLEILKLSDIIKDITVQEYFQDT 1748
PRLRE++MTA++KP TP M+ + + + + E K + L LS++++ +TV E
Sbjct: 1282 PRLREIVMTASSKPTTPTMKLPLREHISDKDIETFVKQVSRLTLSEVVERVTVTERLSSK 1341
Query: 1749 N-------RNYDIEIEFIPTLQQVLSLHRIKEKQLNKLFG-----EFNKVIKRQVKSQGK 1892
+ R Y + +EF P ++ + + I +QL++ K I+ +++ K
Sbjct: 1342 SSESDSRQRKYTVLLEFYPP-EEYGTEYEITSEQLHESLAWHFAPRLKKEIQNEIRRVAK 1400
Query: 1893 LKVNNGDIGLGSKVR-GSDLVEDDSL 1967
K +G G KVR G D +++ +
Sbjct: 1401 TKEQEAQVGKGRKVRVGGDEGDEEEV 1426
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 3,311,322,674
Number of extensions: 70606530
Number of successful extensions: 193038
Number of sequences better than 10.0: 2509
Number of HSP's gapped: 191538
Number of HSP's successfully gapped: 4452
Length of query: 681
Length of database: 1,051,180,864
Length adjustment: 136
Effective length of query: 545
Effective length of database: 611,008,840
Effective search space: 332999817800
Effective search space used: 332999817800
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
5 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
1 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |