Contig-U11586-1
Contig ID Contig-U11586-1
Contig update 2002.12.18
Contig sequence
>Contig-U11586-1 (Contig-U11586-1Q) /CSM_Contig/Contig-U11586-1Q.Seq.d
TGGTATTAATTCAATATTAAGTACATCATCTATGACACCATCAAATTCGA
GTCATTTTCATGATAATAATAATAAAAATAATATAACTACTGATGGTGAA
AGTGAAACATCATTTGAAACCGATAGTCAAATTAGTAGTAAAGCTTTGGA
TGGCGCAGGTGGAGAGACAATATTTGATACACCTCACCATA---------
-TTTTTTACCATATACTCCAAGAAATCAAAATACTATGCCATATAATAAA
TTATTAATATCAGTTTATGAATTTTTAAAAAAAGAAAAAGTATTAAGACA
AACTTGTTTTATTGGATCAATGGTATTTTCAACATTTTCAATACTTTGGA
CAACATTATCATTTAGATTGAATGAAGAACCCTATGAATATCCATGTGCA
TTCATTGGTTTATTTGGTTTAATTGGTATGGCAGGTGCAATTTCTTCCCC
ATTATCTGGTAGATTGGCTGAAAGATTTGGTATAAATAGATTGATGATAG
TTTATTTATTAATTTGTGCAGTTGGTTATTTAATTTTAATGTTTTTCGAT
TATCATATCATTGGTTTAATTGTTGGTATTTTCATATTGGATTTAGGTGT
TCAATCATGTCATATTAGTAATCAATCAAGAAATAATCTTTTATCCTCCT
CCTTACAAGATGATACTTCAAAATATAATATCAATACAATTTATATGGCT
TCTTATTTCATTGGTGGAAGTATTGGTTCTGGTTTATCTGGTGTCATTTT
TGCTCATTTTGGTTGGGCTGGCTCTTCAATAGTAGCACTTTTATTCCTAA
GTCTTGGTTTAATTTGTCATTTAATAACTTATGAAAAACCAACATTTATT
TCAGTTCCAATTGAAGATTAATAAAAAAATAAAAAAATAAATAAATAAAT
TAAAAAAAATAAAATTTAATATTCACCTAAAATCTTTTGAANTTTAGAAA
AAA

Gap gap included
Contig length 943
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 4901762
End point 4903001
Strand (PLUS/MINUS) PLUS
Number of clones 3
Number of EST 4
Link to clone list U11586
List of clone(s)

est1=CFG678F,1,192
est2=CFG678Z,193,1235
est3=CHO885Z,483,1189
est4=SSM733E,890,1218
Translated Amino Acid sequence
GINSILSTSSMTPSNSSHFHDNNNKNNITTDGESETSFETDSQISSKALDGAGGETIFDT
PHH---

---FLPYTPRNQNTMPYNKLLISVYEFLKKEKVLRQTCFIGSMVFSTFSILWTTLSFRLN
EEPYEYPCAFIGLFGLIGMAGAISSPLSGRLAERFGINRLMIVYLLICAVGYLILMFFDY
HIIGLIVGIFILDLGVQSCHISNQSRNNLLSSSLQDDTSKYNINTIYMASYFIGGSIGSG
LSGVIFAHFGWAGSSIVALLFLSLGLICHLITYEKPTFISVPIED**knkkink*ikknk
i*yspkif*xlek


Translated Amino Acid sequence (All Frames)
Frame A:
wy*fnikyiiydtikfesfs*****k*yny*w*k*nii*nr*sn***sfgwrrwrdni*y
tsp---

---fftiyskkskyyai**iinisl*ifkkrksiktnlfywingifnifntldniii*ie
*rtl*ismcihwfiwfnwygrcnffpiiw*ig*kiwyk*iddslfinlcswlfnfnvfrl
syhwfncwyfhigfrcsimsy**sikk*sfillltr*yfki*yqynlygflfhwwkywfw
fiwchfcsfwlgwlfnsstfipkswfnlsfnnl*ktniyfssn*rlikk*knk*in*kk*
nlift*nllxfrk

Frame B:
GINSILSTSSMTPSNSSHFHDNNNKNNITTDGESETSFETDSQISSKALDGAGGETIFDT
PHH---

---FLPYTPRNQNTMPYNKLLISVYEFLKKEKVLRQTCFIGSMVFSTFSILWTTLSFRLN
EEPYEYPCAFIGLFGLIGMAGAISSPLSGRLAERFGINRLMIVYLLICAVGYLILMFFDY
HIIGLIVGIFILDLGVQSCHISNQSRNNLLSSSLQDDTSKYNINTIYMASYFIGGSIGSG
LSGVIFAHFGWAGSSIVALLFLSLGLICHLITYEKPTFISVPIED**knkkink*ikknk
i*yspkif*xlek

Frame C:
vliqy*vhhl*hhqirvifmiiiikii*llmvkvkhhlkpivklvvklwmaqverqylih
lti---

---fyhilqeikilchiiny*yqfmnf*kkkky*dklvlldqwyfqhfqyfgqhyhld*m
knpmnihvhslvylv*lvwqvqflphylvdwlkdlv*id***fiy*fvqlvi*f*cfsii
islv*llvfsywi*vfnhvilvinqeiifypppykmilqniisiqfiwllislvevlvlv
ylvsfllilvglalq**hfys*vlv*fvi**lmknqhlfqfqlkinkkikk*inklkkik
fnihlksfex*kk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11586-1 (Contig-U11586-1Q)
/CSM_Contig/Contig-U11586-1Q.Seq.d
(953 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11586-1 (Contig-U11586-1Q) /CSM_Contig/Conti... 1154 0.0
Contig-U11687-1 (Contig-U11687-1Q) /CSM_Contig/Conti... 38 0.017
Contig-U04450-1 (Contig-U04450-1Q) /CSM_Contig/Conti... 38 0.017
Contig-U02855-1 (Contig-U02855-1Q) /CSM_Contig/Conti... 38 0.017
Contig-U12984-1 (Contig-U12984-1Q) /CSM_Contig/Conti... 36 0.067
Contig-U11515-1 (Contig-U11515-1Q) /CSM_Contig/Conti... 36 0.067
Contig-U09897-1 (Contig-U09897-1Q) /CSM_Contig/Conti... 36 0.067
Contig-U13543-1 (Contig-U13543-1Q) /CSM_Contig/Conti... 34 0.27
Contig-U13501-1 (Contig-U13501-1Q) /CSM_Contig/Conti... 34 0.27
Contig-U13032-1 (Contig-U13032-1Q) /CSM_Contig/Conti... 34 0.27

>Contig-U11586-1 (Contig-U11586-1Q) /CSM_Contig/Contig-U11586-1Q.Seq.d
Length = 953

Score = 1154 bits (582), Expect = 0.0
Identities = 582/582 (100%)
Strand = Plus / Plus


Query: 290 gtattaagacaaacttgttttattggatcaatggtattttcaacattttcaatactttgg 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gtattaagacaaacttgttttattggatcaatggtattttcaacattttcaatactttgg 349


Query: 350 acaacattatcatttagattgaatgaagaaccctatgaatatccatgtgcattcattggt 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 acaacattatcatttagattgaatgaagaaccctatgaatatccatgtgcattcattggt 409


Query: 410 ttatttggtttaattggtatggcaggtgcaatttcttccccattatctggtagattggct 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ttatttggtttaattggtatggcaggtgcaatttcttccccattatctggtagattggct 469


Query: 470 gaaagatttggtataaatagattgatgatagtttatttattaatttgtgcagttggttat 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gaaagatttggtataaatagattgatgatagtttatttattaatttgtgcagttggttat 529


Query: 530 ttaattttaatgtttttcgattatcatatcattggtttaattgttggtattttcatattg 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ttaattttaatgtttttcgattatcatatcattggtttaattgttggtattttcatattg 589


Query: 590 gatttaggtgttcaatcatgtcatattagtaatcaatcaagaaataatcttttatcctcc 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gatttaggtgttcaatcatgtcatattagtaatcaatcaagaaataatcttttatcctcc 649


Query: 650 tccttacaagatgatacttcaaaatataatatcaatacaatttatatggcttcttatttc 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tccttacaagatgatacttcaaaatataatatcaatacaatttatatggcttcttatttc 709


Query: 710 attggtggaagtattggttctggtttatctggtgtcatttttgctcattttggttgggct 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 attggtggaagtattggttctggtttatctggtgtcatttttgctcattttggttgggct 769


Query: 770 ggctcttcaatagtagcacttttattcctaagtcttggtttaatttgtcatttaataact 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 ggctcttcaatagtagcacttttattcctaagtcttggtttaatttgtcatttaataact 829


Query: 830 tatgaaaaaccaacatttatttcagttccaattgaagattaa 871
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 tatgaaaaaccaacatttatttcagttccaattgaagattaa 871


Score = 208 bits (105), Expect = 8e-54
Identities = 105/105 (100%)
Strand = Plus / Plus


Query: 87 ctactgatggtgaaagtgaaacatcatttgaaaccgatagtcaaattagtagtaaagctt 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 ctactgatggtgaaagtgaaacatcatttgaaaccgatagtcaaattagtagtaaagctt 146


Query: 147 tggatggcgcaggtggagagacaatatttgatacacctcaccata 191
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 tggatggcgcaggtggagagacaatatttgatacacctcaccata 191


Score = 137 bits (69), Expect = 2e-32
Identities = 69/69 (100%)
Strand = Plus / Plus


Query: 208 accatatactccaagaaatcaaaatactatgccatataataaattattaatatcagttta 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 accatatactccaagaaatcaaaatactatgccatataataaattattaatatcagttta 267


Query: 268 tgaattttt 276
|||||||||
Sbjct: 268 tgaattttt 276


Score = 123 bits (62), Expect = 4e-28
Identities = 62/62 (100%)
Strand = Plus / Plus


Query: 1 tggtattaattcaatattaagtacatcatctatgacaccatcaaattcgagtcattttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggtattaattcaatattaagtacatcatctatgacaccatcaaattcgagtcattttca 60


Query: 61 tg 62
||
Sbjct: 61 tg 62


Score = 81.8 bits (41), Expect = 1e-15
Identities = 44/44 (100%)
Strand = Plus / Plus


Query: 910 taaaatttaatattcacctaaaatcttttgaantttagaaaaaa 953
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 taaaatttaatattcacctaaaatcttttgaantttagaaaaaa 953


>Contig-U11687-1 (Contig-U11687-1Q) /CSM_Contig/Contig-U11687-1Q.Seq.d
Length = 1508

Score = 38.2 bits (19), Expect = 0.017
Identities = 22/23 (95%)
Strand = Plus / Plus


Query: 822 taataacttatgaaaaaccaaca 844
|||||| ||||||||||||||||
Sbjct: 223 taataagttatgaaaaaccaaca 245


>Contig-U04450-1 (Contig-U04450-1Q) /CSM_Contig/Contig-U04450-1Q.Seq.d
Length = 2252

Score = 38.2 bits (19), Expect = 0.017
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 415 tggtttaattggtatggca 433
|||||||||||||||||||
Sbjct: 1100 tggtttaattggtatggca 1118


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,578
Number of Sequences: 6905
Number of extensions: 15578
Number of successful extensions: 1774
Number of sequences better than 10.0: 243
length of query: 953
length of database: 5,674,871
effective HSP length: 16
effective length of query: 937
effective length of database: 5,564,391
effective search space: 5213834367
effective search space used: 5213834367
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.25
Homology vs DNA
Query= Contig-U11586-1 (Contig-U11586-1Q) /CSM_Contig/Contig-U11586-1Q.Seq.d
(953 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ372903) Dictyostelium discoideum cDNA clone:ddc14k20, 3' ... 1106 0.0 1
(BJ385119) Dictyostelium discoideum cDNA clone:ddc51j22, 3' ... 1078 0.0 3
(C93168) Dictyostelium discoideum slug cDNA, clone SSM733. 515 e-142 1
(BJ359465) Dictyostelium discoideum cDNA clone:ddc14k20, 5' ... 208 4e-80 2
(BH560560) BOGHB26TR BOGH Brassica oleracea genomic clone BO... 40 0.038 2
(CP000361) Arcobacter butzleri RM4018, complete genome. 36 0.30 2
(BD452723) Diagnosis of Diseases Associated with tumor suppr... 48 0.32 2
(AX251202) Sequence 170 from Patent WO0168912. 48 0.32 2
(EU016196) Friesea grisea mitochondrion, complete genome. 36 0.39 2
(AP009966) Lotus japonicus genomic DNA, clone: LjT39P23, TM0... 46 0.81 2
(AC186107) Microcebus murinus clone CH257-433I15, WORKING DR... 32 0.83 10
(EU029161) Chorthippus chinensis mitochondrion, complete gen... 38 0.87 4
(BX004843) Zebrafish DNA sequence from clone CH211-165E15. 34 1.3 2
(AG320559) Mus musculus molossinus DNA, clone:MSMg01-106H17.... 40 1.3 2
(ED184769) AUAC-aad75e04.g1 Ascaris suum whole genome shotgu... 36 1.7 2
(DN850504) 4146011 BARC_3GAL chicken mixed tissue Gallus gal... 32 1.7 2
(AU074341) Dictyostelium discoideum slug cDNA, clone SSK428. 34 1.8 2
(AP009815) Lotus japonicus genomic DNA, clone: LjT24P23, TM0... 46 2.4 1
(AP006722) Lotus japonicus genomic DNA, chromosome 5, clone:... 46 2.4 1
(AP004922) Lotus japonicus genomic DNA, chromosome 5, clone:... 46 2.4 1
(AY008389) Urostyla grandis micronuclear type I DNA polymera... 46 2.4 1
(AY008387) Urostyla grandis macronuclear type I DNA polymera... 46 2.4 1
(AC120740) Rattus norvegicus clone CH230-12L18, *** SEQUENCI... 46 2.4 1
(AC093940) Rattus norvegicus clone CH230-18H13, WORKING DRAF... 46 2.4 1
(AP010081) Lotus japonicus genomic DNA, clone: LjT16L08, TM0... 46 2.4 1
(AP008086) Lotus japonicus genomic DNA, chromosome 1, clone:... 46 2.4 1
(AC224783) Bos taurus clone CH240-476D8, WORKING DRAFT SEQUE... 46 2.4 1
(AC224782) Bos taurus clone CH240-476D12, WORKING DRAFT SEQU... 46 2.4 1
(AC175442) Bos taurus clone CH240-273L23, WORKING DRAFT SEQU... 46 2.4 1
(AC173699) Bos taurus clone CH240-301B9, WORKING DRAFT SEQUE... 46 2.4 1
(AC171590) Bos taurus clone CH240-301B19, WORKING DRAFT SEQU... 46 2.4 1
(AC165782) Bos taurus clone CH240-162C12, WORKING DRAFT SEQU... 46 2.4 1
(ED724191) GM_WBb0078G15.f GM_WBb Glycine max genomic clone ... 46 2.4 1
(CZ519689) GMW2-78G15a.b1 GMW2 Glycine max genomic, genomic ... 46 2.4 1
(CR297443) mte1-14B17RM1 BAC end, cultivar Jemalong A17 of M... 46 2.4 1
(CG961136) MBEDH87TFC mth2 Medicago truncatula genomic clone... 46 2.4 1
(BZ509194) BONGJ46TR BO_1.6_2_KB_tot Brassica oleracea genom... 46 2.4 1
(EW780404) SmSal172 Orange wheat blossom midge salivary glan... 46 2.4 1
(AC091223) Drosophila melanogaster 3L BAC RP98-48G6 (Roswell... 38 2.8 5
(AM477486) Vitis vinifera contig VV78X267621.2, whole genome... 44 2.8 2
(AC178216) Strongylocentrotus purpuratus clone R3-3085H18, W... 36 3.3 11
(CC514557) CH240_359B7.T7 CHORI-240 Bos taurus genomic clone... 34 3.6 3
(AY037525) Euaresta aequalis 16S ribosomal RNA gene, partial... 32 4.1 3
(AC106300) Rattus norvegicus clone CH230-98E21, *** SEQUENCI... 36 4.3 7
(AC148373) Oryctolagus cuniculus clone LB1-235H1, WORKING DR... 32 4.7 2
(AC154034) Medicago truncatula chromosome 7 BAC clone mth2-7... 32 4.7 2
(EI917860) VUH2-51M15TV VUUBBa (VUH2) Vigna unguiculata geno... 42 5.3 2
(CT841537) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 5.8 4
(AC202821) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB... 42 5.9 3
(AF177142) Hemileophila sibirica 16S ribosomal RNA gene, par... 32 6.0 2
(AF467683) Acidiella sp. HYH-1 16S ribosomal RNA gene, parti... 32 6.0 2
(EI904094) VUH2-31D22TV VUUBBa (VUH2) Vigna unguiculata geno... 42 6.1 2
(BM778989) EST589564 KV2 Medicago truncatula cDNA clone pKV2... 32 6.1 2
(CX585333) TTE00021821 Amplicon Express - Conjugative Form T... 32 6.2 2
(CX581245) TTE00019491 Amplicon Express - Conjugative Form T... 32 6.2 2
(EJ205226) 1092344338918 Global-Ocean-Sampling_GS-27-01-01-1... 42 6.2 2
(DW018203) EST1227164 MTY Medicago truncatula cDNA clone MTY... 32 6.2 2
(EI926518) VUH2-66M6TR VUUBBa (VUH2) Vigna unguiculata genom... 42 6.2 2
(CX540710) s13dNF55H06GS060_464698 Germinating Seed Medicago... 32 6.2 2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 30 6.3 11
(BE319208) NF045C03LF1F1019 Developing leaf Medicago truncat... 32 6.3 2
(EI916502) VUH2-61P17TV VUUBBa (VUH2) Vigna unguiculata geno... 42 6.4 2
(EI933279) VUH2-84P22TV VUUBBa (VUH2) Vigna unguiculata geno... 42 6.5 2
(DR078026) RTFEPL1_1_A11.g1_A029 Roots plus added iron Pinus... 38 6.8 2
(DX907957) KBrH043H16R KBrH, Brassica rapa HindIII BAC libra... 36 7.0 2
(EI936354) VUH2-84M7TR VUUBBa (VUH2) Vigna unguiculata genom... 42 7.1 2
(EI905154) VUH2-38B18TV VUUBBa (VUH2) Vigna unguiculata geno... 42 7.2 2
(CG824633) SOYFF10TV LargeInsertSoybeanGenLib Glycine max ge... 38 7.4 2
(CG819633) SOYDR89TV LargeInsertSoybeanGenLib Glycine max ge... 38 7.4 2
(EI915931) VUH2-46E15TR VUUBBa (VUH2) Vigna unguiculata geno... 42 7.5 2
(AC121008) Rattus norvegicus clone CH230-255I10, WORKING DRA... 34 7.7 6
(EI940922) VUH2-83D16TV VUUBBa (VUH2) Vigna unguiculata geno... 42 7.7 2
(EI938378) VUH2-73G18TR VUUBBa (VUH2) Vigna unguiculata geno... 42 7.8 2
(EI938979) VUH2-73H13TR VUUBBa (VUH2) Vigna unguiculata geno... 42 8.0 2
(CR391941) Zebrafish DNA sequence from clone DKEY-25O19 in l... 38 8.3 6
(EI896834) VUH1-83D12TR VUUBBa (VUH1) Vigna unguiculata geno... 42 8.3 2
(AC015371) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 38 8.6 2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 32 8.9 13
(AP010009) Lotus japonicus genomic DNA, chromosome 4, clone:... 40 8.9 5
(CT025900) Zebrafish DNA sequence from clone DKEY-10O6 in li... 44 9.6 1
(BX649469) Zebrafish DNA sequence from clone DKEY-273O8 in l... 44 9.6 1
(BV319949) S236P6486RA7.T0 AlaskanMalamute Canis familiaris ... 44 9.6 1
(AM438136) Vitis vinifera contig VV78X154374.2, whole genome... 44 9.6 1
(AC189446) Brassica rapa subsp. pekinensis clone KBrB070M16,... 44 9.6 1
(AC218091) Equus caballus chromosome P, clone XX-162K6, comp... 44 9.6 1
(DQ656933) Norellia mirusae 12S ribosomal RNA gene, partial ... 44 9.6 1
(DQ656931) Norellia flavicorne 12S ribosomal RNA gene, parti... 44 9.6 1
(AC160159) Bos taurus clone CH240-86J4, WORKING DRAFT SEQUEN... 44 9.6 1
(AC218924) Equus caballus chromosome P clone 145_J_21 map P,... 44 9.6 1
(AC217547) Equus caballus chromosome P clone XX-178I7 map P,... 44 9.6 1
(AC180333) Strongylocentrotus purpuratus clone R3-3118K19, W... 44 9.6 1
(AC163079) Bos taurus clone CH240-127H1, WORKING DRAFT SEQUE... 44 9.6 1
(FH547340) CHO_OF4513xo06f1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 9.6 1
(EJ507543) 1095407012429 Global-Ocean-Sampling_GS-28-01-01-1... 44 9.6 1
(ED517375) KBrB102N04R KBrB, Brassica rapa BamHI BAC library... 44 9.6 1
(DX534664) GH_MBb0047F03r GH_MBb Gossypium hirsutum genomic ... 44 9.6 1
(DU088239) 35768 Tomato HindIII BAC Library Solanum lycopers... 44 9.6 1
(CW703717) AIAA-aab32h03.g1 Ancylostoma caninum whole genome... 44 9.6 1
(CL894936) abg29a12.y1 Soybean random, unfiltered genomic li... 44 9.6 1
(BH990533) oee42c03.g1 B.oleracea002 Brassica oleracea genom... 44 9.6 1

>(BJ372903) Dictyostelium discoideum cDNA clone:ddc14k20, 3' end,
single read.
Length = 644

Score = 1106 bits (558), Expect = 0.0
Identities = 558/558 (100%)
Strand = Plus / Minus


Query: 311 attggatcaatggtattttcaacattttcaatactttggacaacattatcatttagattg 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 attggatcaatggtattttcaacattttcaatactttggacaacattatcatttagattg 585


Query: 371 aatgaagaaccctatgaatatccatgtgcattcattggtttatttggtttaattggtatg 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aatgaagaaccctatgaatatccatgtgcattcattggtttatttggtttaattggtatg 525


Query: 431 gcaggtgcaatttcttccccattatctggtagattggctgaaagatttggtataaataga 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gcaggtgcaatttcttccccattatctggtagattggctgaaagatttggtataaataga 465


Query: 491 ttgatgatagtttatttattaatttgtgcagttggttatttaattttaatgtttttcgat 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ttgatgatagtttatttattaatttgtgcagttggttatttaattttaatgtttttcgat 405


Query: 551 tatcatatcattggtttaattgttggtattttcatattggatttaggtgttcaatcatgt 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tatcatatcattggtttaattgttggtattttcatattggatttaggtgttcaatcatgt 345


Query: 611 catattagtaatcaatcaagaaataatcttttatcctcctccttacaagatgatacttca 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 catattagtaatcaatcaagaaataatcttttatcctcctccttacaagatgatacttca 285


Query: 671 aaatataatatcaatacaatttatatggcttcttatttcattggtggaagtattggttct 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 aaatataatatcaatacaatttatatggcttcttatttcattggtggaagtattggttct 225


Query: 731 ggtttatctggtgtcatttttgctcattttggttgggctggctcttcaatagtagcactt 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ggtttatctggtgtcatttttgctcattttggttgggctggctcttcaatagtagcactt 165


Query: 791 ttattcctaagtcttggtttaatttgtcatttaataacttatgaaaaaccaacatttatt 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 ttattcctaagtcttggtttaatttgtcatttaataacttatgaaaaaccaacatttatt 105


Query: 851 tcagttccaattgaagat 868
||||||||||||||||||
Sbjct: 104 tcagttccaattgaagat 87

Score = 69.9 bits (35), Expect = 2e-07
Identities = 38/38 (100%)
Strand = Plus / Minus


Query: 916 ttaatattcacctaaaatcttttgaantttagaaaaaa 953
||||||||||||||||||||||||||||||||||||||
Sbjct: 39 ttaatattcacctaaaatcttttgaantttagaaaaaa 2

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,101,285,979
Number of extensions: 68961067
Number of successful extensions: 5619769
Number of sequences better than 10.0: 109
Length of query: 953
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 929
Effective length of database: 97,308,875,965
Effective search space: 90399945771485
Effective search space used: 90399945771485
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.30
Homology vs Protein
Query= Contig-U11586-1 (Contig-U11586-1Q) /CSM_Contig/Contig-U11586-1Q.Seq.d
(953 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

CP000721_732(CP000721|pid:none) Clostridium beijerinckii NCIMB 8... 131 4e-29
CP000726_3477(CP000726|pid:none) Clostridium botulinum A str. AT... 125 2e-27
AM412317_3577(AM412317|pid:none) Clostridium botulinum A str. AT... 125 2e-27
CP001581_3804(CP001581|pid:none) Clostridium botulinum A2 str. K... 125 3e-27
AP009049_625(AP009049|pid:none) Clostridium kluyveri NBRC 12016 ... 123 8e-27
CP000673_669(CP000673|pid:none) Clostridium kluyveri DSM 555, co... 123 8e-27
CP001083_3711(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 123 1e-26
CP000728_3555(CP000728|pid:none) Clostridium botulinum F str. La... 123 1e-26
CP000939_3583(CP000939|pid:none) Clostridium botulinum B1 str. O... 123 1e-26
CP000673_2266(CP000673|pid:none) Clostridium kluyveri DSM 555, c... 122 1e-26
CP000270_2954(CP000270|pid:none) Burkholderia xenovorans LB400 c... 122 2e-26
CP000721_1934(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 119 2e-25
CP001052_2596(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 117 4e-25
CP000232_1819(CP000232|pid:none) Moorella thermoacetica ATCC 390... 115 2e-24
CP000570_1392(CP000570|pid:none) Burkholderia pseudomallei 668 c... 108 3e-22
BX571965_1308(BX571965|pid:none) Burkholderia pseudomallei strai... 108 3e-22
CP000526_1183(CP000526|pid:none) Burkholderia mallei SAVP1 chrom... 108 3e-22
CP000086_2789(CP000086|pid:none) Burkholderia thailandensis E264... 108 3e-22
CP000124_1517(CP000124|pid:none) Burkholderia pseudomallei 1710b... 108 3e-22
CP000560_2957(CP000560|pid:none) Bacillus amyloliquefaciens FZB4... 107 8e-22
CP000668_2835(CP000668|pid:none) Yersinia pestis Pestoides F, co... 105 2e-21
AE009952_912(AE009952|pid:none) Yersinia pestis KIM, complete ge... 105 2e-21
CU207366_1830(CU207366|pid:none) Gramella forsetii KT0803 comple... 105 3e-21
AM747720_1109(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 105 3e-21
CP000121_24(CP000121|pid:none) Anabaena variabilis ATCC 29413 pl... 105 3e-21
CP000151_1151(CP000151|pid:none) Burkholderia sp. 383 chromosome... 104 5e-21
AE017042_655(AE017042|pid:none) Yersinia pestis biovar Microtus ... 104 5e-21
CP001087_3342(CP001087|pid:none) Desulfobacterium autotrophicum ... 104 5e-21
BX950851_3349(BX950851|pid:none) Erwinia carotovora subsp. atros... 103 7e-21
AP009385_1142(AP009385|pid:none) Burkholderia multivorans ATCC 1... 103 7e-21
CP000813_2035(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 103 9e-21
CP000440_1108(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 103 9e-21
CP001111_275(CP001111|pid:none) Stenotrophomonas maltophilia R55... 103 1e-20
CP001025_1099(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 102 1e-20
CP000378_742(CP000378|pid:none) Burkholderia cenocepacia AU 1054... 102 1e-20
BX950851_3482(BX950851|pid:none) Erwinia carotovora subsp. atros... 102 2e-20
AM286415_3086(AM286415|pid:none) Yersinia enterocolitica subsp. ... 101 3e-20
AP010904_4061(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 101 3e-20
CP000958_1197(CP000958|pid:none) Burkholderia cenocepacia MC0-3 ... 101 4e-20
CP000949_1461(CP000949|pid:none) Pseudomonas putida W619, comple... 100 6e-20
B65048(B65048)hypothetical protein b2681 - Escherichia coli (str... 100 7e-20
CU928145_2891(CU928145|pid:none) Escherichia coli 55989 chromoso... 100 7e-20
CU928163_2951(CU928163|pid:none) Escherichia coli UMN026 chromos... 100 7e-20
CP001503_1006(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 100 7e-20
(P76628) RecName: Full=Putative uncharacterized transporter ygaY... 100 7e-20
CU928158_365(CU928158|pid:none) Escherichia fergusonii ATCC 3546... 100 7e-20
CP000243_2987(CP000243|pid:none) Escherichia coli UTI89, complet... 100 1e-19
(Q8X4V6) RecName: Full=Uncharacterized transporter ygaY; &BA000... 100 1e-19
BX842647_291(BX842647|pid:none) Bdellovibrio bacteriovorus compl... 99 2e-19
AF494101_4(AF494101|pid:none) Erwinia chrysanthemi osmoprotectan... 99 2e-19
AP008229_499(AP008229|pid:none) Xanthomonas oryzae pv. oryzae MA... 99 3e-19
FM180568_2945(FM180568|pid:none) Escherichia coli 0127:H6 E2348/... 98 4e-19
CT573213_2824(CT573213|pid:none) Frankia alni str. ACN14A chromo... 98 4e-19
CP000712_3809(CP000712|pid:none) Pseudomonas putida F1, complete... 98 5e-19
CP000360_4473(CP000360|pid:none) Acidobacteria bacterium Ellin34... 97 6e-19
AE014075_3159(AE014075|pid:none) Escherichia coli CFT073, comple... 97 6e-19
AE006468_2733(AE006468|pid:none) Salmonella enterica subsp. ente... 97 6e-19
CP000822_3923(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 97 8e-19
AE008923_506(AE008923|pid:none) Xanthomonas axonopodis pv. citri... 97 8e-19
CP000685_2180(CP000685|pid:none) Flavobacterium johnsoniae UW101... 97 1e-18
BX640447_126(BX640447|pid:none) Bordetella bronchiseptica strain... 97 1e-18
AP008955_301(AP008955|pid:none) Brevibacillus brevis NBRC 100599... 96 1e-18
CP000721_710(CP000721|pid:none) Clostridium beijerinckii NCIMB 8... 96 2e-18
CT573326_1420(CT573326|pid:none) Pseudomonas entomophila str. L4... 96 2e-18
AE008922_492(AE008922|pid:none) Xanthomonas campestris pv. campe... 96 2e-18
CP001359_1795(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 96 2e-18
AM920689_530(AM920689|pid:none) Xanthomonas campestris pv. campe... 96 2e-18
CP001127_2759(CP001127|pid:none) Salmonella enterica subsp. ente... 96 2e-18
BX571872_93(BX571872|pid:none) Photorhabdus luminescens subsp. l... 96 2e-18
CP000251_2135(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 96 2e-18
CP000572_3418(CP000572|pid:none) Burkholderia pseudomallei 1106a... 96 2e-18
CP000826_3724(CP000826|pid:none) Serratia proteamaculans 568, co... 96 2e-18
CU928162_3059(CU928162|pid:none) Escherichia coli ED1a chromosom... 96 2e-18
AM933173_2619(AM933173|pid:none) Salmonella enterica subsp. ente... 95 4e-18
EU896858_1(EU896858|pid:none) Escherichia coli strain TB182A put... 94 5e-18
CP000880_154(CP000880|pid:none) Salmonella enterica subsp. arizo... 94 5e-18
AP008955_5888(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 94 7e-18
AM902716_3334(AM902716|pid:none) Bordetella petrii strain DSM 12... 93 2e-17
CP001182_1337(CP001182|pid:none) Acinetobacter baumannii AB0057,... 92 3e-17
CP000124_3413(CP000124|pid:none) Burkholderia pseudomallei 1710b... 92 3e-17
AE016830_1483(AE016830|pid:none) Enterococcus faecalis V583, com... 91 6e-17
CP000633_909(CP000633|pid:none) Agrobacterium vitis S4 chromosom... 91 8e-17
FP236842_911(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/96... 91 8e-17
CP001172_2298(CP001172|pid:none) Acinetobacter baumannii AB307-0... 90 1e-16
CU459141_2376(CU459141|pid:none) Acinetobacter baumannii str. AY... 90 1e-16
AM902716_599(AM902716|pid:none) Bordetella petrii strain DSM 128... 89 2e-16
CP000099_394(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 89 2e-16
CP000458_642(CP000458|pid:none) Burkholderia cenocepacia HI2424 ... 88 5e-16
CP000378_158(CP000378|pid:none) Burkholderia cenocepacia AU 1054... 88 5e-16
CP000863_1217(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 88 5e-16
CP000884_3720(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 87 6e-16
BX572603_44(BX572603|pid:none) Rhodopseudomonas palustris CGA009... 86 1e-15
CP000152_3103(CP000152|pid:none) Burkholderia sp. 383 chromosome... 86 2e-15
CP000416_2073(CP000416|pid:none) Lactobacillus brevis ATCC 367, ... 86 2e-15
AM039952_2350(AM039952|pid:none) Xanthomonas campestris pv. vesi... 86 2e-15
CP000033_989(CP000033|pid:none) Lactobacillus acidophilus NCFM, ... 85 4e-15
CP000758_1112(CP000758|pid:none) Ochrobactrum anthropi ATCC 4918... 84 5e-15
AM181176_1753(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 84 7e-15
AF416331_54(AF416331|pid:none) Ruegeria sp. PR1b plasmid pSD25, ... 84 9e-15
AM286415_3541(AM286415|pid:none) Yersinia enterocolitica subsp. ... 83 1e-14
CP001029_4674(CP001029|pid:none) Methylobacterium populi BJ001, ... 83 1e-14
A95396(A95396) protein [imported] - Sinorhizobium meliloti (stra... 83 2e-14
CP000076_1665(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 83 2e-14
CP001029_5163(CP001029|pid:none) Methylobacterium populi BJ001, ... 83 2e-14
CP001510_4807(CP001510|pid:none) Methylobacterium extorquens AM1... 82 2e-14
CP000269_1600(CP000269|pid:none) Janthinobacterium sp. Marseille... 82 2e-14
CP000075_3137(CP000075|pid:none) Pseudomonas syringae pv. syring... 82 2e-14
CP000442_248(CP000442|pid:none) Burkholderia ambifaria AMMD chro... 82 4e-14
AP006841_1415(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 82 4e-14
CT573326_523(CT573326|pid:none) Pseudomonas entomophila str. L48... 82 4e-14
CP001027_89(CP001027|pid:none) Burkholderia ambifaria MC40-6 chr... 82 4e-14
CR626927_1283(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 82 4e-14
CP000712_529(CP000712|pid:none) Pseudomonas putida F1, complete ... 81 5e-14
AE016853_3228(AE016853|pid:none) Pseudomonas syringae pv. tomato... 81 5e-14
CP000250_2408(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 81 5e-14
BX640426_298(BX640426|pid:none) Bordetella parapertussis strain ... 81 6e-14
AE015451_497(AE015451|pid:none) Pseudomonas putida KT2440 comple... 80 8e-14
CP000874_1561(CP000874|pid:none) Rhizobium sp. NGR234 plasmid pN... 80 8e-14
CU458896_4035(CU458896|pid:none) Mycobacterium abscessus chromos... 80 8e-14
CP000094_2447(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 80 8e-14
CP001172_2098(CP001172|pid:none) Acinetobacter baumannii AB307-0... 80 1e-13
CP001182_1539(CP001182|pid:none) Acinetobacter baumannii AB0057,... 80 1e-13
CP001001_1445(CP001001|pid:none) Methylobacterium radiotolerans ... 80 1e-13
AE015451_3533(AE015451|pid:none) Pseudomonas putida KT2440 compl... 80 1e-13
AE016825_1800(AE016825|pid:none) Chromobacterium violaceum ATCC ... 80 1e-13
CP000863_1389(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 79 2e-13
CP000949_2473(CP000949|pid:none) Pseudomonas putida W619, comple... 79 2e-13
CP000826_3569(CP000826|pid:none) Serratia proteamaculans 568, co... 79 2e-13
CP000960_985(CP000960|pid:none) Burkholderia cenocepacia MC0-3 c... 78 5e-13
AM260480_977(AM260480|pid:none) Ralstonia eutropha H16 chromosom... 78 5e-13
CP000441_2329(CP000441|pid:none) Burkholderia ambifaria AMMD chr... 78 5e-13
AP009386_410(AP009386|pid:none) Burkholderia multivorans ATCC 17... 78 5e-13
AM747721_870(AM747721|pid:none) Burkholderia cenocepacia J2315 c... 77 9e-13
CP001504_279(CP001504|pid:none) Burkholderia glumae BGR1 chromos... 77 9e-13
AM920431_996(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 77 9e-13
CP000943_5716(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 76 1e-12
CP000378_1464(CP000378|pid:none) Burkholderia cenocepacia AU 105... 76 2e-12
CP000712_2170(CP000712|pid:none) Pseudomonas putida F1, complete... 76 2e-12
AE015928_161(AE015928|pid:none) Bacteroides thetaiotaomicron VPI... 76 2e-12
CR543861_1542(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 75 3e-12
CP001298_668(CP001298|pid:none) Methylobacterium chloromethanicu... 75 3e-12
BA000012_2665(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 75 3e-12
CP000964_2337(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 75 3e-12
CP000474_3379(CP000474|pid:none) Arthrobacter aurescens TC1, com... 75 4e-12
CP001016_955(CP001016|pid:none) Beijerinckia indica subsp. indic... 75 4e-12
AP008957_4455(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 75 4e-12
CP000094_3659(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 74 6e-12
CR543861_1554(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 74 6e-12
CP001349_6945(CP001349|pid:none) Methylobacterium nodulans ORS 2... 74 6e-12
CP000616_887(CP000616|pid:none) Burkholderia vietnamiensis G4 ch... 74 7e-12
CP001172_2087(CP001172|pid:none) Acinetobacter baumannii AB307-0... 74 7e-12
CP001182_1550(CP001182|pid:none) Acinetobacter baumannii AB0057,... 74 7e-12
(P96675) RecName: Full=Uncharacterized MFS-type transporter ydeR... 74 7e-12
CP001510_499(CP001510|pid:none) Methylobacterium extorquens AM1,... 74 1e-11
CP000124_2510(CP000124|pid:none) Burkholderia pseudomallei 1710b... 73 1e-11
CP001408_2480(CP001408|pid:none) Burkholderia pseudomallei MSHR3... 73 2e-11
CU633448_85(CU633448|pid:none) Podospora anserina genomic DNA ch... 73 2e-11
CP000269_2633(CP000269|pid:none) Janthinobacterium sp. Marseille... 72 4e-11
CP000655_1216(CP000655|pid:none) Polynucleobacter necessarius su... 71 5e-11
CP000571_677(CP000571|pid:none) Burkholderia pseudomallei 668 ch... 70 1e-10
CP000560_527(CP000560|pid:none) Bacillus amyloliquefaciens FZB42... 70 1e-10
CP000943_3546(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 70 1e-10
BA000040_3962(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 70 1e-10
AE016879_943(AE016879|pid:none) Bacillus anthracis str. Ames, co... 69 2e-10
AE005674_2708(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 69 2e-10
CP000227_992(CP000227|pid:none) Bacillus cereus Q1, complete gen... 69 2e-10
CP001215_3452(CP001215|pid:none) Bacillus anthracis str. CDC 684... 69 2e-10
AM260480_2273(AM260480|pid:none) Ralstonia eutropha H16 chromoso... 69 2e-10
AP008957_1235(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 69 2e-10
CP000091_2173(CP000091|pid:none) Ralstonia eutropha JMP134 chrom... 69 2e-10
AE016877_2994(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 69 3e-10
CP000959_1589(CP000959|pid:none) Burkholderia cenocepacia MC0-3 ... 69 3e-10
AP006725_2743(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 68 4e-10
CP000152_184(CP000152|pid:none) Burkholderia sp. 383 chromosome ... 68 4e-10
AM747720_2547(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 68 4e-10
CU633750_2012(CU633750|pid:none) Cupriavidus taiwanensis str. LM... 68 4e-10
CP000628_2164(CP000628|pid:none) Agrobacterium radiobacter K84 c... 68 5e-10
CP000379_2384(CP000379|pid:none) Burkholderia cenocepacia AU 105... 67 9e-10
AP006618_1437(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 67 9e-10
CP000270_1725(CP000270|pid:none) Burkholderia xenovorans LB400 c... 67 9e-10
AE016879_3020(AE016879|pid:none) Bacillus anthracis str. Ames, c... 66 2e-09
AL939118_165(AL939118|pid:none) Streptomyces coelicolor A3(2) co... 66 2e-09
CP001074_2866(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 66 2e-09
CP001635_4695(CP001635|pid:none) Variovorax paradoxus S110 chrom... 66 2e-09
AM746676_8967(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 65 3e-09
CP000441_1586(CP000441|pid:none) Burkholderia ambifaria AMMD chr... 65 3e-09
CP001089_150(CP001089|pid:none) Geobacter lovleyi SZ, complete g... 65 3e-09
CP000943_834(CP000943|pid:none) Methylobacterium sp. 4-46, compl... 65 3e-09
AM889285_2290(AM889285|pid:none) Gluconacetobacter diazotrophicu... 65 3e-09
AP009386_2006(AP009386|pid:none) Burkholderia multivorans ATCC 1... 65 3e-09
CP001157_3676(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 65 3e-09
CP000542_1016(CP000542|pid:none) Verminephrobacter eiseniae EF01... 64 6e-09
AM236080_3219(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 64 8e-09
CP000352_3532(CP000352|pid:none) Ralstonia metallidurans CH34, c... 64 8e-09
CP001157_369(CP001157|pid:none) Azotobacter vinelandii DJ, compl... 64 1e-08
CP000512_2489(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 64 1e-08
CP001053_1483(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 63 1e-08
CP000521_546(CP000521|pid:none) Acinetobacter baumannii ATCC 179... 63 1e-08
AP009385_2985(AP009385|pid:none) Burkholderia multivorans ATCC 1... 63 1e-08
CP000868_212(CP000868|pid:none) Burkholderia multivorans ATCC 17... 63 1e-08
CP000863_568(CP000863|pid:none) Acinetobacter baumannii ACICU, c... 63 2e-08
(P57648) RecName: Full=Uncharacterized transporter BU588; &BA00... 62 2e-08
CU468230_2828(CU468230|pid:none) Acinetobacter baumannii str. SD... 61 5e-08
CP001280_1417(CP001280|pid:none) Methylocella silvestris BL2, co... 61 6e-08
CP000884_2940(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 60 1e-07
CP001111_1193(CP001111|pid:none) Stenotrophomonas maltophilia R5... 60 1e-07
AE007869_2081(AE007869|pid:none) Agrobacterium tumefaciens str. ... 59 2e-07
CP000783_2203(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 59 2e-07
H97615(H97615)antibiotic resistance protein homolog ydeR [import... 59 2e-07
CP000647_1053(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 59 2e-07
(Q8K902) RecName: Full=Uncharacterized transporter BUsg_567; &A... 59 2e-07
AP006725_1861(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 59 2e-07
AP009493_2644(AP009493|pid:none) Streptomyces griseus subsp. gri... 59 3e-07
CP000680_4335(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 58 4e-07
AL646053_78(AL646053|pid:none) Ralstonia solanacearum GMI1000 me... 58 4e-07
AE007258_9(AE007258|pid:none) Sinorhizobium meliloti 1021 plasmi... 58 5e-07
AM743169_2730(AM743169|pid:none) Stenotrophomonas maltophilia K2... 57 7e-07
CU459141_208(CU459141|pid:none) Acinetobacter baumannii str. AYE... 57 9e-07
CP001089_1802(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 57 9e-07
CP000964_3413(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 57 1e-06
CP000958_288(CP000958|pid:none) Burkholderia cenocepacia MC0-3 c... 57 1e-06
CP000378_2779(CP000378|pid:none) Burkholderia cenocepacia AU 105... 57 1e-06
CP000614_276(CP000614|pid:none) Burkholderia vietnamiensis G4 ch... 57 1e-06
AM286415_1924(AM286415|pid:none) Yersinia enterocolitica subsp. ... 56 2e-06
CP000021_985(CP000021|pid:none) Vibrio fischeri ES114 chromosome... 56 2e-06
CP000151_227(CP000151|pid:none) Burkholderia sp. 383 chromosome ... 56 2e-06
CP000058_399(CP000058|pid:none) Pseudomonas syringae pv. phaseol... 56 2e-06
CP000570_206(CP000570|pid:none) Burkholderia pseudomallei 668 ch... 56 2e-06
CP000124_394(CP000124|pid:none) Burkholderia pseudomallei 1710b ... 56 2e-06
CP001025_234(CP001025|pid:none) Burkholderia ambifaria MC40-6 ch... 55 3e-06
CP000521_3578(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 55 4e-06
AM902716_3599(AM902716|pid:none) Bordetella petrii strain DSM 12... 55 4e-06
CP000647_1542(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 55 4e-06
CP000744_5690(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 55 4e-06
BX571866_166(BX571866|pid:none) Photorhabdus luminescens subsp. ... 55 4e-06
CP000720_1842(CP000720|pid:none) Yersinia pseudotuberculosis IP ... 55 5e-06
CP000863_3466(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 55 5e-06
CP000949_394(CP000949|pid:none) Pseudomonas putida W619, complet... 55 5e-06
AP006725_2338(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 55 5e-06
CP000557_1327(CP000557|pid:none) Geobacillus thermodenitrificans... 54 6e-06
CP000721_1903(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 54 8e-06
BX950851_2239(BX950851|pid:none) Erwinia carotovora subsp. atros... 54 8e-06
CU458896_2682(CU458896|pid:none) Mycobacterium abscessus chromos... 54 8e-06
CP000817_1846(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 53 2e-05
CP001337_2663(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 53 2e-05
AL939121_243(AL939121|pid:none) Streptomyces coelicolor A3(2) co... 53 2e-05
AM420293_1009(AM420293|pid:none) Saccharopolyspora erythraea NRR... 52 2e-05
AE017333_2725(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 52 2e-05
CP000560_3650(CP000560|pid:none) Bacillus amyloliquefaciens FZB4... 52 3e-05
CP001157_4365(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 52 4e-05
CR378667_137(CR378667|pid:none) Photobacterium profundum SS9; se... 52 4e-05
CP001133_1090(CP001133|pid:none) Vibrio fischeri MJ11 chromosome... 51 5e-05
AE016795_2576(AE016795|pid:none) Vibrio vulnificus CMCP6 chromos... 51 7e-05
BA000030_3367(BA000030|pid:none) Streptomyces avermitilis MA-468... 51 7e-05
CP001189_758(CP001189|pid:none) Gluconacetobacter diazotrophicus... 51 7e-05
CP001503_3214(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 50 9e-05
CP000026_1273(CP000026|pid:none) Salmonella enterica subsp. ente... 50 9e-05
CP001138_1578(CP001138|pid:none) Salmonella enterica subsp. ente... 50 1e-04
CU651637_1523(CU651637|pid:none) Escherichia coli LF82 chromosom... 50 1e-04
CP001120_390(CP001120|pid:none) Salmonella enterica subsp. enter... 50 1e-04
CP001349_1458(CP001349|pid:none) Methylobacterium nodulans ORS 2... 50 1e-04
(P43531) RecName: Full=Inner membrane transport protein ynfM; &... 50 1e-04
BX571965_3279(BX571965|pid:none) Burkholderia pseudomallei strai... 50 1e-04
CP000247_1525(CP000247|pid:none) Escherichia coli 536, complete ... 50 1e-04
BA000007_2302(BA000007|pid:none) Escherichia coli O157:H7 str. S... 50 1e-04
AE014075_1925(AE014075|pid:none) Escherichia coli CFT073, comple... 50 1e-04
CP000783_1679(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 50 1e-04
AP009240_1717(AP009240|pid:none) Escherichia coli SE11 DNA, comp... 50 1e-04
CP000970_1542(CP000970|pid:none) Escherichia coli SMS-3-5, compl... 50 1e-04
AE005174_2349(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 50 1e-04
CP000926_5090(CP000926|pid:none) Pseudomonas putida GB-1, comple... 50 1e-04
CU928160_1607(CU928160|pid:none) Escherichia coli IAI1 chromosom... 49 2e-04
CP000880_1434(CP000880|pid:none) Salmonella enterica subsp. ariz... 49 2e-04
AB0682(AB0682) probable membrane transport protein STY1579 [impo... 49 2e-04
AE017220_1504(AE017220|pid:none) Salmonella enterica subsp. ente... 49 2e-04
AE006468_318(AE006468|pid:none) Salmonella enterica subsp. enter... 49 3e-04
CP001113_340(CP001113|pid:none) Salmonella enterica subsp. enter... 49 3e-04
AE017220_373(AE017220|pid:none) Salmonella enterica subsp. enter... 49 3e-04
CP000857_329(CP000857|pid:none) Salmonella enterica subsp. enter... 49 3e-04
AM933173_330(AM933173|pid:none) Salmonella enterica subsp. enter... 49 3e-04
CP001144_327(CP001144|pid:none) Salmonella enterica subsp. enter... 49 3e-04
CR543861_2858(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 49 3e-04
CP001298_5009(CP001298|pid:none) Methylobacterium chloromethanic... 49 3e-04
CP000124_23(CP000124|pid:none) Burkholderia pseudomallei 1710b c... 48 4e-04
AP008955_1571(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 48 4e-04
CP000572_3796(CP000572|pid:none) Burkholderia pseudomallei 1106a... 48 4e-04
CP000570_3739(CP000570|pid:none) Burkholderia pseudomallei 668 c... 48 4e-04
AP008232_1464(AP008232|pid:none) Sodalis glossinidius str. 'mors... 48 4e-04
CU928158_1373(CU928158|pid:none) Escherichia fergusonii ATCC 354... 48 4e-04
CP001510_4834(CP001510|pid:none) Methylobacterium extorquens AM1... 48 4e-04
CP001600_1988(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 48 4e-04
AM181176_407(AM181176|pid:none) Pseudomonas fluorescens SBW25 co... 48 6e-04
CP001016_902(CP001016|pid:none) Beijerinckia indica subsp. indic... 48 6e-04
CP000908_4689(CP000908|pid:none) Methylobacterium extorquens PA1... 48 6e-04
CP001074_373(CP001074|pid:none) Rhizobium etli CIAT 652, complet... 47 0.001
AP008957_4788(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 47 0.001
CP000510_2636(CP000510|pid:none) Psychromonas ingrahamii 37, com... 47 0.001
AL646052_3067(AL646052|pid:none) Ralstonia solanacearum GMI1000 ... 47 0.001
BX640447_65(BX640447|pid:none) Bordetella bronchiseptica strain ... 47 0.001
FP236842_1849(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 47 0.001
FM954972_1586(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 47 0.001
CP000433_283(CP000433|pid:none) Rhodococcus jostii RHA1 plasmid ... 47 0.001
CP000750_3547(CP000750|pid:none) Kineococcus radiotolerans SRS30... 47 0.001
CP000083_2774(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 46 0.002
CU694391_208(CU694391|pid:none) Ralstonia solanacearum strain Mo... 46 0.002
CP001191_4313(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 46 0.002
CP001029_5189(CP001029|pid:none) Methylobacterium populi BJ001, ... 46 0.002
CP001131_4093(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 46 0.002
CU468135_1760(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 45 0.004
AM039952_326(AM039952|pid:none) Xanthomonas campestris pv. vesic... 45 0.005
CT573326_304(CT573326|pid:none) Pseudomonas entomophila str. L48... 45 0.005
CP000474_2703(CP000474|pid:none) Arthrobacter aurescens TC1, com... 45 0.005
CU633900_83(CU633900|pid:none) Podospora anserina genomic DNA ch... 45 0.005
CP001186_1931(CP001186|pid:none) Bacillus cereus G9842, complete... 44 0.006
CP000323_1515(CP000323|pid:none) Psychrobacter cryohalolentis K5... 44 0.011
CP000912_411(CP000912|pid:none) Brucella suis ATCC 23445 chromos... 43 0.014
CP001351_268(CP001351|pid:none) Methylobacterium nodulans ORS 20... 43 0.014
AB196638_2(AB196638|pid:none) Pseudomonas sp. MT-1 orf5, orf6, n... 43 0.014
AE014292_427(AE014292|pid:none) Brucella suis 1330 chromosome II... 43 0.014
CP000480_96(CP000480|pid:none) Mycobacterium smegmatis str. MC2 ... 43 0.014
CP000873_418(CP000873|pid:none) Brucella canis ATCC 23365 chromo... 43 0.014
CP000479_1472(CP000479|pid:none) Mycobacterium avium 104, comple... 43 0.018
CP000789_2042(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 43 0.018
BX571660_249(BX571660|pid:none) Wolinella succinogenes, complete... 42 0.024
AE016825_1769(AE016825|pid:none) Chromobacterium violaceum ATCC ... 42 0.024
CP000155_6450(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 42 0.024
CP000251_2205(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 42 0.024
A75525(A75525) conserved hypothetical protein - Deinococcus radi... 42 0.031
CP000769_552(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, co... 42 0.031
CP000821_2907(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 42 0.031
CP000480_6020(CP000480|pid:none) Mycobacterium smegmatis str. MC... 42 0.040
CP001628_331(CP001628|pid:none) Micrococcus luteus NCTC 2665, co... 42 0.040
U40487_1(U40487|pid:none) Mycobacterium smegmatis proton antipor... 42 0.040
CU458896_2017(CU458896|pid:none) Mycobacterium abscessus chromos... 41 0.053
CP001341_2523(CP001341|pid:none) Arthrobacter chlorophenolicus A... 40 0.090
CP000903_1891(CP000903|pid:none) Bacillus weihenstephanensis KBA... 40 0.12
AM942444_1105(AM942444|pid:none) Corynebacterium urealyticum DSM... 40 0.15
CP001157_2507(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 40 0.15
CP001359_1715(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 39 0.20
CP001154_2161(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 39 0.20
AM086400_3(AM086400|pid:none) Staphylococcus simulans pSCFS4 pla... 39 0.20
AP011115_6699(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 39 0.20
AM408573_12(AM408573|pid:none) Staphylococcus warneri pSCFS6 pla... 39 0.20
CP001176_1930(CP001176|pid:none) Bacillus cereus B4264, complete... 39 0.20
AM180252_631(AM180252|pid:none) Lawsonia intracellularis PHE/MN1... 39 0.20
EU893390_1(EU893390|pid:none) Escherichia coli strain 493/89 put... 39 0.20
CP000943_1287(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 39 0.20
CP001131_1647(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 39 0.20
CP000820_2440(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 39 0.20
CP000563_4226(CP000563|pid:none) Shewanella baltica OS155, compl... 39 0.26
AE008923_317(AE008923|pid:none) Xanthomonas axonopodis pv. citri... 39 0.26
CP000697_2871(CP000697|pid:none) Acidiphilium cryptum JF-5, comp... 39 0.26
CP000891_61(CP000891|pid:none) Shewanella baltica OS195, complet... 39 0.26
CP000628_437(CP000628|pid:none) Agrobacterium radiobacter K84 ch... 39 0.26
CP000360_1147(CP000360|pid:none) Acidobacteria bacterium Ellin34... 39 0.26
A99445(A99445) permease, multidrug efflux [imported] - Sulfolobu... 39 0.34
AP006618_1263(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 39 0.34
CP000822_4861(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 39 0.34
AE006641_1749(AE006641|pid:none) Sulfolobus solfataricus P2, com... 38 0.45
AP009387_72(AP009387|pid:none) Burkholderia multivorans ATCC 176... 38 0.45
CU928163_3973(CU928163|pid:none) Escherichia coli UMN026 chromos... 38 0.45
CU928145_3906(CU928145|pid:none) Escherichia coli 55989 chromoso... 38 0.45
AP006725_4760(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 38 0.45
(P37662) RecName: Full=Inner membrane protein yhjX; &AP009048_3... 38 0.45
FM177140_58(FM177140|pid:none) Lactobacillus casei BL23 complete... 38 0.45
AP009493_5202(AP009493|pid:none) Streptomyces griseus subsp. gri... 38 0.58
CP000444_56(CP000444|pid:none) Shewanella sp. MR-7, complete gen... 38 0.58
CP000233_1559(CP000233|pid:none) Lactobacillus salivarius UCC118... 38 0.58
AL939112_55(AL939112|pid:none) Streptomyces coelicolor A3(2) com... 38 0.58
CR522870_880(CR522870|pid:none) Desulfotalea psychrophila LSv54 ... 38 0.58
CP000667_2917(CP000667|pid:none) Salinispora tropica CNB-440, co... 38 0.58
CP001322_1670(CP001322|pid:none) Desulfatibacillum alkenivorans ... 37 0.76
CP000462_64(CP000462|pid:none) Aeromonas hydrophila subsp. hydro... 37 0.76
CP000909_1563(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 37 0.76
AE006641_1231(AE006641|pid:none) Sulfolobus solfataricus P2, com... 37 1.00
CP000943_629(CP000943|pid:none) Methylobacterium sp. 4-46, compl... 37 1.00
AE014075_4270(AE014075|pid:none) Escherichia coli CFT073, comple... 37 1.00
CU928162_4122(CU928162|pid:none) Escherichia coli ED1a chromosom... 37 1.00
AM900040_5(AM900040|pid:none) Streptomyces olivaceus elloramycin... 37 1.00
CP000909_3438(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 37 1.00
AP009240_3820(AP009240|pid:none) Escherichia coli SE11 DNA, comp... 37 1.00
CP000783_4058(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 37 1.00
CU928164_4023(CU928164|pid:none) Escherichia coli IAI39 chromoso... 37 1.00
CP000970_3716(CP000970|pid:none) Escherichia coli SMS-3-5, compl... 37 1.00
CU651637_3435(CU651637|pid:none) Escherichia coli LF82 chromosom... 37 1.00
CP000682_1262(CP000682|pid:none) Metallosphaera sedula DSM 5348,... 37 1.3
AP008232_633(AP008232|pid:none) Sodalis glossinidius str. 'morsi... 37 1.3
CP000792_730(CP000792|pid:none) Campylobacter concisus 13826, co... 37 1.3
AE017194_200(AE017194|pid:none) Bacillus cereus ATCC 10987, comp... 37 1.3
AE017333_207(AE017333|pid:none) Bacillus licheniformis DSM 13, c... 37 1.3
CP000644_58(CP000644|pid:none) Aeromonas salmonicida subsp. salm... 37 1.3
AP010904_3867(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 37 1.3
AP008955_907(AP008955|pid:none) Brevibacillus brevis NBRC 100599... 37 1.3
CP000316_964(CP000316|pid:none) Polaromonas sp. JS666, complete ... 37 1.3
AM743169_217(AM743169|pid:none) Stenotrophomonas maltophilia K27... 36 1.7
AP008229_4098(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M... 36 1.7
CP001111_1332(CP001111|pid:none) Stenotrophomonas maltophilia R5... 36 1.7
CP001157_1603(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 36 1.7
AE016879_171(AE016879|pid:none) Bacillus anthracis str. Ames, co... 36 1.7
CP000509_2133(CP000509|pid:none) Nocardioides sp. JS614, complet... 36 1.7
CP000485_168(CP000485|pid:none) Bacillus thuringiensis str. Al H... 36 1.7
CP000961_2986(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 36 1.7
CP000107_666(CP000107|pid:none) Ehrlichia canis str. Jake, compl... 36 1.7
CP000454_3910(CP000454|pid:none) Arthrobacter sp. FB24, complete... 36 1.7
CP000561_989(CP000561|pid:none) Pyrobaculum calidifontis JCM 115... 36 1.7
CP001197_1416(CP001197|pid:none) Desulfovibrio vulgaris str. 'Mi... 36 1.7
AL445066_232(AL445066|pid:none) Thermoplasma acidophilum complet... 36 1.7
BA000023_1850(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 36 2.2
CP001338_1185(CP001338|pid:none) Candidatus Methanosphaerula pal... 36 2.2
AE017355_163(AE017355|pid:none) Bacillus thuringiensis serovar k... 36 2.2
CP000388_3355(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 36 2.2
AE016817_143(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 36 2.2
AM114193_455(AM114193|pid:none) Uncultured methanogenic archaeon... 35 2.9
CP000572_526(CP000572|pid:none) Burkholderia pseudomallei 1106a ... 35 2.9
CP000124_685(CP000124|pid:none) Burkholderia pseudomallei 1710b ... 35 2.9
AE008922_302(AE008922|pid:none) Xanthomonas campestris pv. campe... 35 2.9
AP008957_3931(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 35 2.9
CP000388_3424(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 35 2.9
CP000570_510(CP000570|pid:none) Burkholderia pseudomallei 668 ch... 35 2.9
CP001618_631(CP001618|pid:none) Beutenbergia cavernae DSM 12333,... 35 2.9
AB260935_4(AB260935|pid:none) Uncultured bacterium DNA, salt-str... 35 2.9
BA000028_402(BA000028|pid:none) Oceanobacillus iheyensis HTE831 ... 35 2.9
CP001504_1943(CP001504|pid:none) Burkholderia glumae BGR1 chromo... 35 2.9
CP000647_1861(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 35 2.9
CP000431_2329(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 35 3.8
AJ429231_6(AJ429231|pid:none) Enterococcus hirae ftsW gene, psr ... 35 3.8
CP000473_1062(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 35 3.8
CP000769_135(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, co... 35 3.8
AM743169_1488(AM743169|pid:none) Stenotrophomonas maltophilia K2... 35 3.8
AP008955_2629(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 35 3.8
AE005176_1348(AE005176|pid:none) Lactococcus lactis subsp. lacti... 35 3.8
AB259663_11(AB259663|pid:none) Streptomyces griseus orfA, griT, ... 35 3.8
AP011115_4140(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 35 3.8
AP009351_2324(AP009351|pid:none) Staphylococcus aureus subsp. au... 35 4.9
CP000557_1422(CP000557|pid:none) Geobacillus thermodenitrificans... 35 4.9
AE017261_1042(AE017261|pid:none) Picrophilus torridus DSM 9790, ... 35 4.9
AJ938182_2295(AJ938182|pid:none) Staphylococcus aureus RF122 com... 35 4.9
AP007281_1231(AP007281|pid:none) Lactobacillus reuteri JCM 1112 ... 35 4.9
BX571856_2457(BX571856|pid:none) Staphylococcus aureus subsp. au... 35 4.9
AX066341_1(AX066341|pid:none) Sequence 245 from Patent WO0100804. 35 4.9
CP001404_1733(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51... 35 4.9
AL445066_95(AL445066|pid:none) Thermoplasma acidophilum complete... 35 4.9
BA000033_2337(BA000033|pid:none) Staphylococcus aureus subsp. au... 35 4.9
CP000096_601(CP000096|pid:none) Pelodictyon luteolum DSM 273, co... 35 4.9
CP000253_2554(CP000253|pid:none) Staphylococcus aureus subsp. au... 35 4.9
EU016571_6(EU016571|pid:none) Uncultured marine microorganism HF... 35 4.9
DQ118403_8(DQ118403|pid:none) Uncultured euryarchaeote Alv-FOS1 ... 35 4.9
AE000782_1522(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304... 35 4.9
AB385841_18(AB385841|pid:none) Streptomyces albulus pls gene for... 35 4.9
BX842647_256(BX842647|pid:none) Bdellovibrio bacteriovorus compl... 35 4.9
CP000975_2146(CP000975|pid:none) Methylacidiphilum infernorum V4... 34 6.5
AM420293_4714(AM420293|pid:none) Saccharopolyspora erythraea NRR... 34 6.5
BA000012_902(BA000012|pid:none) Mesorhizobium loti MAFF303099 DN... 34 6.5
AX065335_1(AX065335|pid:none) Sequence 461 from Patent WO0100844... 34 6.5
CP001635_2857(CP001635|pid:none) Variovorax paradoxus S110 chrom... 34 6.5
CP001053_2889(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 34 6.5
CP000822_2761(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 34 6.5
CP000254_445(CP000254|pid:none) Methanospirillum hungatei JF-1, ... 34 6.5
AE016877_161(AE016877|pid:none) Bacillus cereus ATCC 14579, comp... 34 6.5
DQ068952_12(DQ068952|pid:none) Phanogenia gracilis mitochondrion... 34 6.5
CP000151_1632(CP000151|pid:none) Burkholderia sp. 383 chromosome... 34 6.5
CP000712_4966(CP000712|pid:none) Pseudomonas putida F1, complete... 34 6.5
CP000388_2402(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 34 6.5
CP000077_1975(CP000077|pid:none) Sulfolobus acidocaldarius DSM 6... 34 6.5
CP000091_651(CP000091|pid:none) Ralstonia eutropha JMP134 chromo... 34 6.5
BA000030_6979(BA000030|pid:none) Streptomyces avermitilis MA-468... 34 6.5
BA000036_2222(BA000036|pid:none) Corynebacterium glutamicum ATCC... 34 6.5
AP009044_2140(AP009044|pid:none) Corynebacterium glutamicum R DN... 34 6.5
AP009044_110(AP009044|pid:none) Corynebacterium glutamicum R DNA... 34 6.5
AP011115_2074(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 34 8.4
AP008937_1361(AP008937|pid:none) Lactobacillus fermentum IFO 395... 34 8.4
CP000699_296(CP000699|pid:none) Sphingomonas wittichii RW1, comp... 34 8.4
DQ489736_1685(DQ489736|pid:none) Leuconostoc citreum KM20, compl... 34 8.4
CP000425_621(CP000425|pid:none) Lactococcus lactis subsp. cremor... 34 8.4
CP000269_3324(CP000269|pid:none) Janthinobacterium sp. Marseille... 34 8.4
AM743169_1237(AM743169|pid:none) Stenotrophomonas maltophilia K2... 34 8.4
CP000529_1647(CP000529|pid:none) Polaromonas naphthalenivorans C... 34 8.4
CP000431_4168(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 34 8.4
CP001022_2304(CP001022|pid:none) Exiguobacterium sibiricum 255-1... 34 8.4
FM211060_114(FM211060|pid:none) Photorhabdus asymbiotica subsp. ... 34 8.4
CP001638_1649(CP001638|pid:none) Geobacillus sp. WCH70, complete... 34 8.4
CP000853_2315(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 34 8.4
AL935261_211(AL935261|pid:none) Lactobacillus plantarum strain W... 34 8.4
AL935262_72(AL935262|pid:none) Lactobacillus plantarum strain WC... 34 8.4
CP000960_371(CP000960|pid:none) Burkholderia cenocepacia MC0-3 c... 34 8.4
CP000555_1585(CP000555|pid:none) Methylibium petroleiphilum PM1,... 34 8.4
CP001110_1128(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 34 8.4
AB126616_10(AB126616|pid:none) Geobacillus stearothermophilus ge... 34 8.4

>CP000721_732(CP000721|pid:none) Clostridium beijerinckii NCIMB
8052, complete genome.
Length = 405

Score = 131 bits (329), Expect = 4e-29
Identities = 65/196 (33%), Positives = 110/196 (56%)
Frame = +2

Query: 242 YNKLLISVYEFLKKEKVLRQTCFIGSMVFSTFSILWTTLSFRLNEEPYEYPCAFIGLFGL 421
Y++LL S+ +K E +LR++ G+++FS FS WTTL F L Y GL GL
Sbjct: 212 YSELLKSMIHLIKTEPILRESSLNGALMFSAFSAFWTTLIFLLESSHYNMGAEAAGLLGL 271

Query: 422 IGMAGAISSPLSGRLAERFGINRLMIVYLLICAVGYLILMFFDYHIIGLIVGIFILDLGV 601
+G++GA+++PL G++A++ G + + +++ V YL+ F + I+GL++G+ +LDLGV
Sbjct: 272 VGVSGALAAPLVGKVADKRGSRFAIGICIVVVIVSYLLFFLFGFKILGLVLGVILLDLGV 331

Query: 602 QSCHIXXXXXXXXXXXXXXDDTSKYNINTIYMASYFXXXXXXXXXXXXXFAHFGWAGSSI 781
QSC++ ++ ++ +NTIYM S+F ++HFGW G
Sbjct: 332 QSCNV-----SNQARVHSLNEETRNRLNTIYMVSFFLGGAFGSFLGSYSYSHFGWYGVCT 386

Query: 782 VALLFLSLGLICHLIT 829
++ L LI H I+
Sbjct: 387 FGIITQILALIIHKIS 402

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,265,746,553
Number of extensions: 22646490
Number of successful extensions: 81040
Number of sequences better than 10.0: 488
Number of HSP's gapped: 80292
Number of HSP's successfully gapped: 488
Length of query: 317
Length of database: 1,051,180,864
Length adjustment: 128
Effective length of query: 189
Effective length of database: 636,901,312
Effective search space: 120374347968
Effective search space used: 120374347968
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.89 gvh: 0.55 alm: 0.18 top: 0.80 tms: 0.27 mit: 0.36 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 1.00 m_ : 0.00

36.0 %: plasma membrane
24.0 %: endoplasmic reticulum
12.0 %: mitochondrial
12.0 %: vacuolar
4.0 %: cytoskeletal
4.0 %: Golgi
4.0 %: nuclear
4.0 %: cytoplasmic

>> prediction for Contig-U11586-1 is pla

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0