Contig-U11573-1
Contig ID Contig-U11573-1
Contig update 2002.12.18
Contig sequence
>Contig-U11573-1 (Contig-U11573-1Q) /CSM_Contig/Contig-U11573-1Q.Seq.d
ATCAACAACCCTGCACCAACTACTTCATCCACTGAAAGTACATCATCAAA
TGGTCAAACTACAACTGCAGCTGCTAACACAACTACATCAACAACAGTTT
CAACCAACTCACCACCAAACAATAAAAGAAAAGAAGTTGATACTACTCAA
CCACCAAAATATATTGAAACTAGAATTAGAAAGAAGGCTAGAGAAGCTTT
AGATTTAATTTCAAATACTAAACAAAGACAAGCTTCTTTATTTAATTTAC
TTGGTAATGATTACACTGGTCCAACTGAACAACAATTAGAAATGATTTTT
AGATTATTCTCTAGAAATGGTAAAACTATTGGTGCTGATGAATTAAAATC
TGTTATTCGTGCTATGGGTAAAAGACCATTAACAAGAAGAATTGATAAAA
TTTTAAATGAATGTGATGAAAATGGTAATGGTACAATTGGAATGGATGAA
TTTGTTAGATACATGCAAAAGAAAGCAATGGAAAAAGCAAAGACATTGGG
TTTATTAGGTGAATCAGATGATGATGAAGAAGAAAATGAAGGTGGTGATA
CTGATGAAGAAAAAGAAGATGGTACTCCAAAGAAAAGAGCAGCAAATGCT
AAACCAAAATCAAAGAAATCAACTAAAAAAGCCACCACCACTGCTGCTGC
AACCACCACCACTGCTGCTGCTACCACTGCCACCGCCACTACCACCACTG
CCACTACTGCA----------TAAAGTTGAAGAATATCATAAGGTTGGTA
AAGGTTTATTCATTTGGAATGACAATGCACCATATATTTTACAAGGTAAT
TGGGTGACAAAGAGATTATATGGTGTAGTTGCCGATGGTAACGAACCAGG
TAAACAAGACCTTACACTTGGTAATGGTTTGGATAAACAACATTTCTCAA
GCCATTTGGTTACCAGTGGTATCGTTAATCTCTACGAAGGTGTCACCATC
TCCTCATTCGCTGATATCACCCCTGCCAATGGAAAATTGGAGGTTTTAGC
CTCCTCTTCCCAAGGTAATAAAATCATGTTGGTCAGTTCAACCGATCCAA
CTAAAGTCGACGCAAATTGTGGTCGTGTTGTCATTGATAGTGGTTTCACT
AAATTGTTTGCTCAATTCTTTTCCGCTGGTACTGGTCGTTATGTAAAGAA
TTGTTGCGTTTGGTTATTGGCTTTAGATCATCGTTTCCGTTTAGGTGTTG
AAGTTTCTGGTGAAATTGAAAAACCAAAGGAAGTCCCAGTATGGCAATAT
TTACATGGAACTTGGAATGACTATGATAATGATGCTAGTAAAGTAGTAGA
AGAAGCTTATCAAGAATGGTTAACTAATCCATATACTGATGTTCGTTCTG
TTAAATCTGGTGCTTGGGCTTATCAAATTGATTTTAAACAAAATAAACAA
ACTAATATTCAACATTTTGCTCATAAAATTCGTGATATTAGAAGAGTTTA
AAGAAGTGTNAACCAACAATAATAAAAAA

Gap gap included
Contig length 1469
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 774184
End point 772294
Strand (PLUS/MINUS) MINUS
Number of clones 4
Number of EST 6
Link to clone list U11573
List of clone(s)

est1=VHI244F,1,565
est2=CFF320F,91,712
est3=CFF320Z,713,1885
est4=VHA657Z,1127,1705
est5=VFA286Z,1144,1719
est6=VHI244Z,1162,1860
Translated Amino Acid sequence
INNPAPTTSSTESTSSNGQTTTAAANTTTSTTVSTNSPPNNKRKEVDTTQPPKYIETRIR
KKAREALDLISNTKQRQASLFNLLGNDYTGPTEQQLEMIFRLFSRNGKTIGADELKSVIR
AMGKRPLTRRIDKILNECDENGNGTIGMDEFVRYMQKKAMEKAKTLGLLGESDDDEEENE
GGDTDEEKEDGTPKKRAANAKPKSKKSTKKATTTAAATTTTAAATTATATTTTATTA---

---KVEEYHKVGKGLFIWNDNAPYILQGNWVTKRLYGVVADGNEPGKQDLTLGNGLDKQH
FSSHLVTSGIVNLYEGVTISSFADITPANGKLEVLASSSQGNKIMLVSSTDPTKVDANCG
RVVIDSGFTKLFAQFFSAGTGRYVKNCCVWLLALDHRFRLGVEVSGEIEKPKEVPVWQYL
HGTWNDYDNDASKVVEEAYQEWLTNPYTDVRSVKSGAWAYQIDFKQNKQTNIQHFAHKIR
DIRRV*rsvnqq**k


Translated Amino Acid sequence (All Frames)
Frame A:
INNPAPTTSSTESTSSNGQTTTAAANTTTSTTVSTNSPPNNKRKEVDTTQPPKYIETRIR
KKAREALDLISNTKQRQASLFNLLGNDYTGPTEQQLEMIFRLFSRNGKTIGADELKSVIR
AMGKRPLTRRIDKILNECDENGNGTIGMDEFVRYMQKKAMEKAKTLGLLGESDDDEEENE
GGDTDEEKEDGTPKKRAANAKPKSKKSTKKATTTAAATTTTAAATTATATTTTATTA---

---*s*ris*gw*rfihle*qctiyftr*lgdkeiiwcscrw*rtr*trpytw*wfg*tt
flkpfgyqwyr*slrrchhllir*yhpcqwkiggfsllfpr**nhvgqfnrsn*srrklw
scch**wfh*ivcsilfrwywslckellrlvigfrssfpfrc*sfw*n*ktkgspsmaif
twnle*l***c**ssrrslsrmvn*siy*csfc*iwclglsn*f*tk*tn*ystfcs*ns
*y*kslkkcxptiik

Frame B:
sttlhqllhplkvhhqmvklqlqlltqlhqqqfqpthhqtikekklillnhqnilklele
rrlekl*i*fqilnkdkllyliylvmitlvqlnnn*k*fldyslemvkllvlmn*nllfv
lwvkdh*qeelikf*mnvmkmvmvqlewmnlldtckrkqwkkqrhwvy*vnqmmmkkkmk
vvilmkkkkmvlqrkeqqmlnqnqrnqlkkppplllqpppllllplppplpplpll---

---KVEEYHKVGKGLFIWNDNAPYILQGNWVTKRLYGVVADGNEPGKQDLTLGNGLDKQH
FSSHLVTSGIVNLYEGVTISSFADITPANGKLEVLASSSQGNKIMLVSSTDPTKVDANCG
RVVIDSGFTKLFAQFFSAGTGRYVKNCCVWLLALDHRFRLGVEVSGEIEKPKEVPVWQYL
HGTWNDYDNDASKVVEEAYQEWLTNPYTDVRSVKSGAWAYQIDFKQNKQTNIQHFAHKIR
DIRRV*rsvnqq**k

Frame C:
qqpctnyfih*kyiikwsnyncsc*hnyinnsfnqlttkq*kkrs*yysttkiy*n*n*k
eg*rsfrfnfky*tktsffi*ftw**lhwsn*ttirndf*iil*kw*nywc**ikicysc
yg*ktinkkn**nfk*m**kw*wynwng*ic*ihakesngkskdigfir*ir***rrk*r
w*y**rkrrwyskeksskc*tkikein*kshhhcccnhhhcccyhchrhyhhchyc---

---klkniirlvkvysfgmtmhhifykvig*qrdymv*lpmvtnqvnktlhlvmvwinni
sqaiwlpvvslistkvspsphslisplpmenwrf*pplpkvikscwsvqpiqlkstqivv
vlslivvslncllnsfplvlvvm*rivafgywl*iivsv*vlkflvklknqrksqygniy
melgmtmimmlvk**kklikng*lihilmfvllnlvlgliklilnkinklifnillikfv
ileefkevxtnnnkk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11573-1 (Contig-U11573-1Q)
/CSM_Contig/Contig-U11573-1Q.Seq.d
(1479 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11573-1 (Contig-U11573-1Q) /CSM_Contig/Conti... 1497 0.0
Contig-U12805-1 (Contig-U12805-1Q) /CSM_Contig/Conti... 38 0.027
Contig-U02849-1 (Contig-U02849-1Q) /CSM_Contig/Conti... 38 0.027
Contig-U14800-1 (Contig-U14800-1Q) /CSM_Contig/Conti... 36 0.10
Contig-U14473-1 (Contig-U14473-1Q) /CSM_Contig/Conti... 36 0.10
Contig-U12539-1 (Contig-U12539-1Q) /CSM_Contig/Conti... 36 0.10
Contig-U12135-1 (Contig-U12135-1Q) /CSM_Contig/Conti... 36 0.10
Contig-U12030-1 (Contig-U12030-1Q) /CSM_Contig/Conti... 36 0.10
Contig-U11800-1 (Contig-U11800-1Q) /CSM_Contig/Conti... 36 0.10
Contig-U11525-1 (Contig-U11525-1Q) /CSM_Contig/Conti... 36 0.10

>Contig-U11573-1 (Contig-U11573-1Q) /CSM_Contig/Contig-U11573-1Q.Seq.d
Length = 1479

Score = 1497 bits (755), Expect = 0.0
Identities = 758/758 (100%)
Strand = Plus / Plus


Query: 722 taaagttgaagaatatcataaggttggtaaaggtttattcatttggaatgacaatgcacc 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 taaagttgaagaatatcataaggttggtaaaggtttattcatttggaatgacaatgcacc 781


Query: 782 atatattttacaaggtaattgggtgacaaagagattatatggtgtagttgccgatggtaa 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 atatattttacaaggtaattgggtgacaaagagattatatggtgtagttgccgatggtaa 841


Query: 842 cgaaccaggtaaacaagaccttacacttggtaatggtttggataaacaacatttctcaag 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 cgaaccaggtaaacaagaccttacacttggtaatggtttggataaacaacatttctcaag 901


Query: 902 ccatttggttaccagtggtatcgttaatctctacgaaggtgtcaccatctcctcattcgc 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 ccatttggttaccagtggtatcgttaatctctacgaaggtgtcaccatctcctcattcgc 961


Query: 962 tgatatcacccctgccaatggaaaattggaggttttagcctcctcttcccaaggtaataa 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 tgatatcacccctgccaatggaaaattggaggttttagcctcctcttcccaaggtaataa 1021


Query: 1022 aatcatgttggtcagttcaaccgatccaactaaagtcgacgcaaattgtggtcgtgttgt 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 aatcatgttggtcagttcaaccgatccaactaaagtcgacgcaaattgtggtcgtgttgt 1081


Query: 1082 cattgatagtggtttcactaaattgtttgctcaattcttttccgctggtactggtcgtta 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 cattgatagtggtttcactaaattgtttgctcaattcttttccgctggtactggtcgtta 1141


Query: 1142 tgtaaagaattgttgcgtttggttattggctttagatcatcgtttccgtttaggtgttga 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 tgtaaagaattgttgcgtttggttattggctttagatcatcgtttccgtttaggtgttga 1201


Query: 1202 agtttctggtgaaattgaaaaaccaaaggaagtcccagtatggcaatatttacatggaac 1261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 agtttctggtgaaattgaaaaaccaaaggaagtcccagtatggcaatatttacatggaac 1261


Query: 1262 ttggaatgactatgataatgatgctagtaaagtagtagaagaagcttatcaagaatggtt 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1262 ttggaatgactatgataatgatgctagtaaagtagtagaagaagcttatcaagaatggtt 1321


Query: 1322 aactaatccatatactgatgttcgttctgttaaatctggtgcttgggcttatcaaattga 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1322 aactaatccatatactgatgttcgttctgttaaatctggtgcttgggcttatcaaattga 1381


Query: 1382 ttttaaacaaaataaacaaactaatattcaacattttgctcataaaattcgtgatattag 1441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1382 ttttaaacaaaataaacaaactaatattcaacattttgctcataaaattcgtgatattag 1441


Query: 1442 aagagtttaaagaagtgtnaaccaacaataataaaaaa 1479
||||||||||||||||||||||||||||||||||||||
Sbjct: 1442 aagagtttaaagaagtgtnaaccaacaataataaaaaa 1479


Score = 1019 bits (514), Expect = 0.0
Identities = 514/514 (100%)
Strand = Plus / Plus


Query: 1 atcaacaaccctgcaccaactacttcatccactgaaagtacatcatcaaatggtcaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcaacaaccctgcaccaactacttcatccactgaaagtacatcatcaaatggtcaaact 60


Query: 61 acaactgcagctgctaacacaactacatcaacaacagtttcaaccaactcaccaccaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acaactgcagctgctaacacaactacatcaacaacagtttcaaccaactcaccaccaaac 120


Query: 121 aataaaagaaaagaagttgatactactcaaccaccaaaatatattgaaactagaattaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aataaaagaaaagaagttgatactactcaaccaccaaaatatattgaaactagaattaga 180


Query: 181 aagaaggctagagaagctttagatttaatttcaaatactaaacaaagacaagcttcttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagaaggctagagaagctttagatttaatttcaaatactaaacaaagacaagcttcttta 240


Query: 241 tttaatttacttggtaatgattacactggtccaactgaacaacaattagaaatgattttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttaatttacttggtaatgattacactggtccaactgaacaacaattagaaatgattttt 300


Query: 301 agattattctctagaaatggtaaaactattggtgctgatgaattaaaatctgttattcgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agattattctctagaaatggtaaaactattggtgctgatgaattaaaatctgttattcgt 360


Query: 361 gctatgggtaaaagaccattaacaagaagaattgataaaattttaaatgaatgtgatgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctatgggtaaaagaccattaacaagaagaattgataaaattttaaatgaatgtgatgaa 420


Query: 421 aatggtaatggtacaattggaatggatgaatttgttagatacatgcaaaagaaagcaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aatggtaatggtacaattggaatggatgaatttgttagatacatgcaaaagaaagcaatg 480


Query: 481 gaaaaagcaaagacattgggtttattaggtgaat 514
||||||||||||||||||||||||||||||||||
Sbjct: 481 gaaaaagcaaagacattgggtttattaggtgaat 514


>Contig-U12805-1 (Contig-U12805-1Q) /CSM_Contig/Contig-U12805-1Q.Seq.d
Length = 4737

Score = 38.2 bits (19), Expect = 0.027
Identities = 25/27 (92%)
Strand = Plus / Plus


Query: 394 gataaaattttaaatgaatgtgatgaa 420
|||||||| ||||| ||||||||||||
Sbjct: 2815 gataaaatattaaaagaatgtgatgaa 2841


Score = 30.2 bits (15), Expect = 6.5
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 118 aacaataaaagaaaa 132
|||||||||||||||
Sbjct: 1826 aacaataaaagaaaa 1840


>Contig-U02849-1 (Contig-U02849-1Q) /CSM_Contig/Contig-U02849-1Q.Seq.d
Length = 982

Score = 38.2 bits (19), Expect = 0.027
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 723 aaagttgaagaatatcata 741
|||||||||||||||||||
Sbjct: 860 aaagttgaagaatatcata 878


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 20,195
Number of Sequences: 6905
Number of extensions: 20195
Number of successful extensions: 2246
Number of sequences better than 10.0: 250
length of query: 1479
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1463
effective length of database: 5,564,391
effective search space: 8140704033
effective search space used: 8140704033
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.25
Homology vs DNA
Query= Contig-U11573-1 (Contig-U11573-1Q) /CSM_Contig/Contig-U11573-1Q.Seq.d
(1479 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ441632) Dictyostelium discoideum cDNA clone:ddv47g12, 3' ... 1374 0.0 1
(BJ372057) Dictyostelium discoideum cDNA clone:ddc11h05, 3' ... 1273 0.0 3
(BJ436869) Dictyostelium discoideum cDNA clone:ddv32a16, 3' ... 1148 0.0 1
(BJ428969) Dictyostelium discoideum cDNA clone:ddv1k22, 3' e... 1126 0.0 1
(BJ422879) Dictyostelium discoideum cDNA clone:ddv47g12, 5' ... 1009 0.0 1
(BJ358725) Dictyostelium discoideum cDNA clone:ddc11h05, 5' ... 823 0.0 1
(AZ679155) ENTGV54TF Entamoeba histolytica Sheared DNA Entam... 38 0.11 4
(DU182197) 1098553678513 CHORI-243 Ovis aries genomic clone ... 38 0.68 2
(AC187011) Canis lupus familiaris chromosome X clone XX-161I... 40 0.90 8
(CR382399) Plasmodium falciparum chromosome 6, complete sequ... 48 0.96 1
(EK293367) 1095462337888 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.96 1
(EK244821) 1095460248067 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.96 1
(EL498668) PFLAB1-M_F3_-P4A_F05_11.AB1 Blood stage Plasmodiu... 48 0.96 1
(BI670541) PfESToaa01b12.y1 Plasmodium falciparum 3D7 asexua... 48 0.96 1
(DQ489736) Leuconostoc citreum KM20, complete genome. 48 0.96 1
(AC112493) Homo sapiens X BAC RP11-2M5 (Roswell Park Cancer ... 40 1.4 3
(AV954839) Ciona intestinalis cDNA, clone:cicl08g04, 5' end,... 40 1.7 3
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 38 1.7 12
(AV866967) Ciona intestinalis cDNA, clone:rcieg49j24, 3' end... 40 1.8 3
(AV981390) Ciona intestinalis cDNA, clone:cieg49j24, 5' end,... 40 1.9 3
(AC131709) Mus musculus BAC clone RP23-198J15 from 18, compl... 32 1.9 2
(BW367546) Ciona intestinalis cDNA, clone:cima841l16, 5'end,... 40 2.1 3
(BW171971) Ciona intestinalis cDNA, clone:rcinc020m13, 3' en... 40 2.1 3
(CS374618) Sequence 721 from Patent WO2006034879. 38 2.2 2
(AC115680) Dictyostelium discoideum chromosome 2 map 4915084... 32 2.2 8
(BW153901) Ciona intestinalis cDNA, clone:rcigd021p07, 3' en... 40 2.2 3
(FF956263) CBWU84390.b1 Yutaka Satou unpublished cDNA librar... 40 2.3 3
(BW301102) Ciona intestinalis cDNA, clone:cinc020m13, 5' end... 40 2.4 3
(BW283424) Ciona intestinalis cDNA, clone:cigd021p07, 5' end... 40 2.5 3
(FG000324) CBWU115949.b1 Yutaka Satou unpublished cDNA libra... 40 2.5 3
(FF937715) CBWU72908.b1 Yutaka Satou unpublished cDNA librar... 40 2.5 3
(BW215316) Ciona intestinalis cDNA, clone:cieg079h16, 5' end... 40 2.5 3
(BW264856) Ciona intestinalis cDNA, clone:cign039j16, 5' end... 40 2.6 3
(BW478492) Ciona intestinalis cDNA, clone:cima018a12, 5'end,... 40 2.6 3
(BW488095) Ciona intestinalis cDNA, clone:cima018a12, 3'end,... 40 2.6 3
(FF858106) CBWU6786.b1 Yutaka Satou unpublished cDNA library... 40 2.7 3
(BW134990) Ciona intestinalis cDNA, clone:rcign039j16, 3' en... 40 2.8 3
(FG081839) UI-FF-IH0-aay-g-20-0-UI.r1 Ceratitis capitata adu... 32 2.8 3
(EG960293) AU_Ich_012B_A03 Whole organism normalized cDNA li... 42 3.6 2
(BV241021) S234P6324RD7.T0 EnglishShepherd Canis familiaris ... 46 3.8 1
(AP006407) Lotus japonicus genomic DNA, chromosome 4, clone:... 46 3.8 1
(DJ066664) Compositions and Methods for the Diagnosis and Tr... 46 3.8 1
(DI120879) Compositions and Methods for the Diagnosis andTre... 46 3.8 1
(CS358907) Sequence 22 from Patent WO2004112829. 46 3.8 1
(A95346) Sequence 19 from Patent WO9927089. 46 3.8 1
(A80967) Sequence 19 from Patent EP0918091. 46 3.8 1
(AL929359) Plasmodium falciparum strain 3D7, chromosome 9; s... 46 3.8 1
(AJ003112) Homo sapiens mRNA for doublecortin. 46 3.8 1
(AC026357) Homo sapiens 12 BAC RP11-855O3 (Roswell Park Canc... 46 3.8 1
(AC118566) Gallus gallus clone TAM31-48J10, WORKING DRAFT SE... 46 3.8 1
(AP008092) Lotus japonicus genomic DNA, chromosome 4, clone:... 46 3.8 1
(AP007462) Lotus japonicus genomic DNA, chromosome 4, clone:... 46 3.8 1
(AP007451) Lotus japonicus genomic DNA, chromosome 4, clone:... 46 3.8 1
(AC016441) Homo sapiens clone RP11-30I3, WORKING DRAFT SEQUE... 46 3.8 1
(ER514511) 1093015486982 Global-Ocean-Sampling_GS-35-01-01-1... 46 3.8 1
(EK272620) 1095462264737 Global-Ocean-Sampling_GS-31-01-01-1... 46 3.8 1
(EJ846402) 1093017857118 Global-Ocean-Sampling_GS-30-02-01-1... 46 3.8 1
(EJ756497) 1092963086236 Global-Ocean-Sampling_GS-30-02-01-1... 46 3.8 1
(EJ753207) 1092963052398 Global-Ocean-Sampling_GS-30-02-01-1... 46 3.8 1
(CZ582652) OA_BBa0169O07.f OA_BBa Oryza alta genomic clone O... 46 3.8 1
(AG248924) Lotus japonicus DNA, clone:LjT23o19_not. 46 3.8 1
(DB917319) Idiosepius paradoxus cDNA, clone:Ip_aB_029_A12, 5... 46 3.8 1
(DB916978) Idiosepius paradoxus cDNA, clone:Ip_aB_028_A12, 5... 46 3.8 1
(FF451886) G178P60147RA10.T0 Acorn worm gastrula/neurula pCM... 46 3.8 1
(EK053336) 1092959726906 Global-Ocean-Sampling_GS-31-01-01-1... 40 4.5 2
(AE002109) Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 38 6.2 4
(CR388163) Zebrafish DNA sequence from clone CH211-247L8 in ... 34 7.0 2
(BM913694) AGENCOURT_6612605 NIH_MGC_98 Homo sapiens cDNA cl... 34 8.1 3
(AJ506325) Arabidopsis thaliana single-copy transgenic T-DNA... 34 8.4 2
(BY635229) Mus musculus visual cortex cDNA, RIKEN full-lengt... 38 9.0 2
(EI694521) SB_BBd28-O12.F SB_BBd Sorghum bicolor genomic 5',... 32 9.4 2
(EI680521) SB_BBd28-P12.F SB_BBd Sorghum bicolor genomic 5',... 32 9.4 2

>(BJ441632) Dictyostelium discoideum cDNA clone:ddv47g12, 3' end,
single read.
Length = 700

Score = 1374 bits (693), Expect = 0.0
Identities = 693/693 (100%)
Strand = Plus / Minus


Query: 757 tattcatttggaatgacaatgcaccatatattttacaaggtaattgggtgacaaagagat 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tattcatttggaatgacaatgcaccatatattttacaaggtaattgggtgacaaagagat 641


Query: 817 tatatggtgtagttgccgatggtaacgaaccaggtaaacaagaccttacacttggtaatg 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tatatggtgtagttgccgatggtaacgaaccaggtaaacaagaccttacacttggtaatg 581


Query: 877 gtttggataaacaacatttctcaagccatttggttaccagtggtatcgttaatctctacg 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gtttggataaacaacatttctcaagccatttggttaccagtggtatcgttaatctctacg 521


Query: 937 aaggtgtcaccatctcctcattcgctgatatcacccctgccaatggaaaattggaggttt 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aaggtgtcaccatctcctcattcgctgatatcacccctgccaatggaaaattggaggttt 461


Query: 997 tagcctcctcttcccaaggtaataaaatcatgttggtcagttcaaccgatccaactaaag 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tagcctcctcttcccaaggtaataaaatcatgttggtcagttcaaccgatccaactaaag 401


Query: 1057 tcgacgcaaattgtggtcgtgttgtcattgatagtggtttcactaaattgtttgctcaat 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tcgacgcaaattgtggtcgtgttgtcattgatagtggtttcactaaattgtttgctcaat 341


Query: 1117 tcttttccgctggtactggtcgttatgtaaagaattgttgcgtttggttattggctttag 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tcttttccgctggtactggtcgttatgtaaagaattgttgcgtttggttattggctttag 281


Query: 1177 atcatcgtttccgtttaggtgttgaagtttctggtgaaattgaaaaaccaaaggaagtcc 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 atcatcgtttccgtttaggtgttgaagtttctggtgaaattgaaaaaccaaaggaagtcc 221


Query: 1237 cagtatggcaatatttacatggaacttggaatgactatgataatgatgctagtaaagtag 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 cagtatggcaatatttacatggaacttggaatgactatgataatgatgctagtaaagtag 161


Query: 1297 tagaagaagcttatcaagaatggttaactaatccatatactgatgttcgttctgttaaat 1356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 tagaagaagcttatcaagaatggttaactaatccatatactgatgttcgttctgttaaat 101


Query: 1357 ctggtgcttgggcttatcaaattgattttaaacaaaataaacaaactaatattcaacatt 1416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 ctggtgcttgggcttatcaaattgattttaaacaaaataaacaaactaatattcaacatt 41


Query: 1417 ttgctcataaaattcgtgatattagaagagttt 1449
|||||||||||||||||||||||||||||||||
Sbjct: 40 ttgctcataaaattcgtgatattagaagagttt 8

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,545,694,665
Number of extensions: 97397073
Number of successful extensions: 8128211
Number of sequences better than 10.0: 74
Length of query: 1479
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1455
Effective length of database: 97,308,875,965
Effective search space: 141584414529075
Effective search space used: 141584414529075
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.30
Homology vs Protein
Query= Contig-U11573-1 (Contig-U11573-1Q) /CSM_Contig/Contig-U11573-1Q.Seq.d
(1479 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AB127360_1(AB127360|pid:none) Scytosiphon lomentaria Slcen mRNA ... 54 1e-05
(P05434) RecName: Full=Caltractin; AltName: Full=Centrin; AltNam... 53 2e-05
DQ884415_1(DQ884415|pid:none) Prorocentrum minimum clone pmi-5p-... 53 3e-05
AB127359_1(AB127359|pid:none) Ochromonas danica Odcen mRNA for c... 53 3e-05
CP001324_525(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 53 3e-05
AF180890_1(AF180890|pid:none) Danio rerio fast skeletal muscle t... 52 4e-05
BC118491_1(BC118491|pid:none) Bos taurus troponin C type 2 (fast... 52 6e-05
NRL(1CLM) calmodulin - Paramecium tetraurelia 52 7e-05
(Q06827) RecName: Full=Caltractin; AltName: Full=Centrin; &S425... 52 7e-05
CR859751_1(CR859751|pid:none) Pongo abelii mRNA; cDNA DKFZp469L1... 52 7e-05
(P07463) RecName: Full=Calmodulin; Short=CaM; &AY61835... 52 7e-05
CR940348_242(CR940348|pid:none) Theileria annulata strain Ankara... 52 7e-05
BT077828_1(BT077828|pid:none) Lepeophtheirus salmonis Pacific fo... 52 7e-05
NRL(1OSA) calmodulin - Paramecium tetraurelia 52 7e-05
(P53440) RecName: Full=Calmodulin, flagellar; AltName: Full=CAM-... 52 7e-05
AB222133_1(AB222133|pid:none) Pan troglodytes verus calm1 mRNA f... 51 9e-05
AF084406_1(AF084406|pid:none) Synthetic construct calmodulin mut... 51 9e-05
EU183505_1(EU183505|pid:none) Danio rerio Centrin2 (centrin2) mR... 51 9e-05
FB334766_1(FB334766|pid:none) Sequence 2292 from Patent WO200711... 51 9e-05
AF084401_1(AF084401|pid:none) Synthetic construct calmodulin mut... 51 9e-05
(P02587) RecName: Full=Troponin C, skeletal muscle; 51 9e-05
DQ646403_1(DQ646403|pid:none) Lama pacos troponin c2 mRNA, compl... 51 9e-05
CR954201_384(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 51 9e-05
AF084404_1(AF084404|pid:none) Synthetic construct calmodulin mut... 51 9e-05
NRL(1TNC) troponin C, calcium-binding component (theoretical mod... 51 9e-05
(O97341) RecName: Full=Calmodulin; Short=CaM; &Y18166_... 51 9e-05
EF134132_1(EF134132|pid:none) Karlodinium micrum strain CCMP1975... 51 9e-05
(O96081) RecName: Full=Calmodulin-B; Short=CaM B; &AB0... 51 9e-05
X83765_1(X83765|pid:none) M.pusilla centrin gene. 51 9e-05
AF084408_1(AF084408|pid:none) Synthetic construct calmodulin mut... 51 9e-05
M59349_1(M59349|pid:none) Plasmodium falciparum calmodulin gene,... 51 9e-05
AK133548_1(AK133548|pid:none) Mus musculus adult male xiphoid ca... 51 9e-05
DQ112161_1(DQ112161|pid:none) Blastocladiella emersonii centrin ... 51 9e-05
(P20801) RecName: Full=Troponin C, skeletal muscle; AltName: Ful... 51 9e-05
EF134131_1(EF134131|pid:none) Karlodinium micrum strain CCMP1975... 51 9e-05
EU935858_1(EU935858|pid:none) Euglena gracilis calmodulin 2 mRNA... 51 1e-04
BT043645_1(BT043645|pid:none) Salmo salar clone HM5_0836 troponi... 51 1e-04
BT046284_1(BT046284|pid:none) Salmo salar clone ssal-eve-554-308... 51 1e-04
(P54213) RecName: Full=Caltractin; AltName: Full=Centrin; &T107... 51 1e-04
CP001160_393(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 51 1e-04
DQ457005_1(DQ457005|pid:none) Synthetic construct plasmid pN1-4n... 50 2e-04
BT076071_1(BT076071|pid:none) Caligus rogercresseyi clone crog-e... 50 2e-04
AF084403_1(AF084403|pid:none) Synthetic construct calmodulin mut... 50 2e-04
I49567(I49567) calmodulin - mouse &M19381_1(M19381|pid:none) 50 2e-04
BT057595_1(BT057595|pid:none) Salmo salar clone ssal-evd-501-031... 50 2e-04
BT056581_1(BT056581|pid:none) Salmo salar clone ssal-evf-539-332... 50 2e-04
AB172317_1(AB172317|pid:none) Macaca fascicularis brain cDNA clo... 50 2e-04
AF084432_1(AF084432|pid:none) Synthetic construct calmodulin mut... 50 2e-04
EU117990_1(EU117990|pid:none) Crassostrea gigas clone CBSN2241 c... 50 2e-04
AY891413_1(AY891413|pid:none) Synthetic construct Homo sapiens c... 50 2e-04
CQ856079_1(CQ856079|pid:none) Sequence 25 from Patent WO20040700... 50 2e-04
(Q40302) RecName: Full=Calmodulin; Short=CaM; &S53019(... 50 2e-04
NRL(1CDLA) Calmodulin complexed with calmodulin-binding peptide ... 50 2e-04
AF084437_1(AF084437|pid:none) Synthetic construct calmodulin mut... 50 2e-04
AY232217_1(AY232217|pid:none) Drosophila yakuba clone yak-ad_Cam... 50 2e-04
(Q9GRJ1) RecName: Full=Calmodulin; Short=CaM; &AJ29161... 50 2e-04
AY894058_1(AY894058|pid:none) Synthetic construct Homo sapiens c... 50 2e-04
L31642_1(L31642|pid:none) Mus musculus calmodulin (CamC) mRNA, 5... 50 2e-04
(O16305) RecName: Full=Calmodulin; Short=CaM; &AB20039... 50 2e-04
(Q95NI4) RecName: Full=Calmodulin; Short=CaM; &AB06318... 50 2e-04
BT079369_1(BT079369|pid:none) Esox lucius clone eluc-evq-520-316... 50 2e-04
EF082571_1(EF082571|pid:none) Picea sitchensis clone WS02719_O06... 50 2e-04
MCLQ(JK0010) calmodulin - migratory locust &NRL(2BBMA) &NRL(2BB... 50 2e-04
BC006182_1(BC006182|pid:none) Homo sapiens calmodulin 3 (phospho... 50 2e-04
MCSFCU(JK0011)calmodulin - sea cucumber (Stichopus japonicus) 50 2e-04
AK289937_1(AK289937|pid:none) Homo sapiens cDNA FLJ75174 complet... 50 2e-04
AK341095_1(AK341095|pid:none) Acyrthosiphon pisum ACYPI000056 mR... 50 2e-04
AK152715_1(AK152715|pid:none) Mus musculus bone marrow macrophag... 50 2e-04
AY813180_1(AY813180|pid:none) Schistosoma japonicum clone SJCHGC... 50 2e-04
(P27166) RecName: Full=Calmodulin; Short=CaM; &FB33590... 50 2e-04
BT074184_1(BT074184|pid:none) Oncorhynchus mykiss clone omyk-evo... 50 2e-04
(P05932) RecName: Full=Calmodulin-beta; Short=Cam B; Fl... 50 2e-04
AY650306_1(AY650306|pid:none) Macaca fascicularis calmodulin 1 m... 50 2e-04
AK152897_1(AK152897|pid:none) Mus musculus bone marrow macrophag... 50 2e-04
(Q9UB37) RecName: Full=Calmodulin-2; Short=CaM 2; &AJ1... 50 2e-04
(P27165) RecName: Full=Calmodulin; Short=CaM; &(Q71UH5... 50 2e-04
AX441271_1(AX441271|pid:none) Sequence 2 from Patent EP1209167. ... 50 2e-04
NRL(1DEG) Calmodulin mutant with glu 84 deleted (del e84) - bovine 50 2e-04
(Q95NR9) RecName: Full=Calmodulin; Short=CaM; &AB06318... 50 2e-04
FN315711_1(FN315711|pid:none) Schistosoma japonicum isolate Anhu... 50 2e-04
(P21251) RecName: Full=Calmodulin; Short=CaM; 50 2e-04
EF177448_1(EF177448|pid:none) Branchiostoma belcheri tsingtauens... 50 2e-04
NRL(5TNC) troponin C - turkey 50 2e-04
(P02598) RecName: Full=Calmodulin; Short=CaM; &D10521_... 50 2e-04
BC053790_1(BC053790|pid:none) Xenopus laevis cam, mRNA (cDNA clo... 50 2e-04
BC008437_1(BC008437|pid:none) Homo sapiens calmodulin 2 (phospho... 50 2e-04
BT075521_1(BT075521|pid:none) Osmerus mordax clone omor-rgc-516-... 50 2e-04
Y08373_1(Y08373|pid:none) T.gondii mRNA for calmodulin. 50 2e-04
BT048791_1(BT048791|pid:none) Salmo salar clone ssal-evd-503-070... 50 2e-04
AK013695_1(AK013695|pid:none) Mus musculus adult male hippocampu... 50 2e-04
(P62145) RecName: Full=Calmodulin; Short=CaM; &(P62147... 50 2e-04
(Q6R520) RecName: Full=Calmodulin; Short=CaM; &AY51374... 50 2e-04
BT074421_1(BT074421|pid:none) Osmerus mordax clone omor-eva-515-... 50 2e-04
DQ217243_1(DQ217243|pid:none) Taeniopygia guttata clone 0061P000... 50 2e-04
S58314(S58314)calmodulin - moss (Physcomitrella patens) 50 3e-04
EF134222_1(EF134222|pid:none) Noctiluca scintillans isolate Nsc-... 50 3e-04
DQ629177_1(DQ629177|pid:none) Sus scrofa TNNC2 (TNNC2) mRNA, com... 50 3e-04
EF673726_1(EF673726|pid:none) Sus scrofa clone 0404884 fast skel... 50 3e-04
BC108522_1(BC108522|pid:none) Xenopus laevis hypothetical protei... 50 3e-04
DQ217245_1(DQ217245|pid:none) Taeniopygia guttata clone 0064P000... 50 3e-04
CP001574_245(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 50 3e-04
X90560_1(X90560|pid:none) Physcomitrella patens mRNA for calmodu... 50 3e-04
(P11118) RecName: Full=Calmodulin; Short=CaM; &EU93585... 50 3e-04
AF083238_1(AF083238|pid:none) Synthetic calmodulin mutant SYNCAM... 49 4e-04
CP001160_196(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 49 4e-04
(Q12798) RecName: Full=Centrin-1; AltName: Full=Caltractin isofo... 49 4e-04
AF084445_1(AF084445|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AF084426_1(AF084426|pid:none) Synthetic construct calmodulin mut... 49 4e-04
(O82659) RecName: Full=Probable calcium-binding protein CML20; A... 49 4e-04
AF084405_1(AF084405|pid:none) Synthetic construct calmodulin mut... 49 4e-04
DQ122882_1(DQ122882|pid:none) Chlamydomonas incerta calmodulin m... 49 4e-04
AF084392_1(AF084392|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AF084438_1(AF084438|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AF084410_1(AF084410|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AB179195_1(AB179195|pid:none) Macaca fascicularis testis cDNA cl... 49 4e-04
AF084449_1(AF084449|pid:none) Synthetic construct calmodulin mut... 49 4e-04
(P43645) RecName: Full=Caltractin; AltName: Full=Centrin; Flags:... 49 4e-04
M11334_1(M11334|pid:none) Synthetic construct VU1 calmodulin gen... 49 4e-04
AF084420_1(AF084420|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AF084427_1(AF084427|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AF084424_1(AF084424|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AF084434_1(AF084434|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AF084448_1(AF084448|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AL953864_8(AL953864|pid:none) Zebrafish DNA sequence from clone ... 49 4e-04
AF084394_1(AF084394|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AY893989_1(AY893989|pid:none) Synthetic construct Homo sapiens c... 49 4e-04
AF084398_1(AF084398|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AF084446_1(AF084446|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AF084442_1(AF084442|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AF084402_1(AF084402|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AF084433_1(AF084433|pid:none) Synthetic construct calmodulin mut... 49 4e-04
DQ479427_1(DQ479427|pid:none) Synthetic construct calcium sensor... 49 4e-04
AF084431_1(AF084431|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AY894048_1(AY894048|pid:none) Synthetic construct Homo sapiens c... 49 4e-04
AF084399_1(AF084399|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AF084435_1(AF084435|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AF084396_1(AF084396|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AF084419_1(AF084419|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AF084430_1(AF084430|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AB050849_1(AB050849|pid:none) Nicotiana tabacum mRNA for calmodu... 49 4e-04
AF084439_1(AF084439|pid:none) Synthetic construct calmodulin mut... 49 4e-04
(P04352) RecName: Full=Calmodulin; Short=CaM; &M20729_... 49 4e-04
AF084400_1(AF084400|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AF084418_1(AF084418|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AF084425_1(AF084425|pid:none) Synthetic construct calmodulin mut... 49 4e-04
AF084416_1(AF084416|pid:none) Synthetic construct calmodulin mut... 49 4e-04
(P02585) RecName: Full=Troponin C, skeletal muscle; &AK291323_1... 49 4e-04
M19027_1(M19027|pid:none) Chicken troponin C (TNC) mRNA, complet... 49 4e-04
AY810794_1(AY810794|pid:none) Schistosoma japonicum SJCHGC00574 ... 49 5e-04
DQ068057_1(DQ068057|pid:none) Clytia gracilis voucher Freeport c... 49 5e-04
AB110088_1(AB110088|pid:none) Alligator mississippiensis TPCS mR... 49 5e-04
(P10246) RecName: Full=Troponin C, skeletal muscle; &A40803(A40... 49 5e-04
AY789872_1(AY789872|pid:none) Laomedea calceolifera voucher 721M... 49 5e-04
AY789876_1(AY789876|pid:none) Obelia geniculata voucher 184NZ ca... 49 5e-04
EU958417_1(EU958417|pid:none) Zea mays clone 1689737 calmodulin ... 49 5e-04
EU645366_1(EU645366|pid:none) Pliobothrus echinatus voucher HBFH... 49 5e-04
AY789855_1(AY789855|pid:none) Clytia gracilis voucher 8GB calmod... 49 5e-04
AY789858_1(AY789858|pid:none) Clytia hemisphaerica voucher 826NS... 49 5e-04
EU645392_1(EU645392|pid:none) Stylaster californicus voucher USN... 49 5e-04
AY789877_1(AY789877|pid:none) Eucheilota bakeri voucher 704CA ca... 49 5e-04
AY789836_1(AY789836|pid:none) Silicularia rosea voucher 152NZ ca... 49 5e-04
(Q5U206) RecName: Full=Calmodulin-like protein 3; &BC086350_1(B... 49 5e-04
EU645393_1(EU645393|pid:none) Stylaster roseus voucher USNM:1073... 49 5e-04
AY789837_1(AY789837|pid:none) Campanularia hincksii voucher 37IT... 49 5e-04
AY280458_1(AY280458|pid:none) Dictyostelium discoideum MyoD ligh... 49 5e-04
AB169637_1(AB169637|pid:none) Macaca fascicularis brain cDNA, cl... 49 5e-04
AY789857_1(AY789857|pid:none) Clytia gracilis voucher 73NC calmo... 49 5e-04
(Q9D6P8) RecName: Full=Calmodulin-like protein 3; &AK010118_1(A... 49 5e-04
(P11120) RecName: Full=Calmodulin; Short=CaM; 49 5e-04
JW0064(JW0064)slow cardiac troponin C - African clawed frog 49 5e-04
AY789841_1(AY789841|pid:none) Orthopyxis integra voucher 796asym... 49 5e-04
NRL(1TOP) Troponin c - chicken 49 5e-04
AY789854_1(AY789854|pid:none) Clytia gracilis voucher 812IT calm... 49 5e-04
DQ431114_1(DQ431114|pid:none) Aegiceras corniculatum calmodulin ... 49 6e-04
AJ001092_1(AJ001092|pid:none) Branchiostoma lanceolatum partial ... 49 6e-04
CS560230_1(CS560230|pid:none) Sequence 817 from Patent WO2006032... 49 6e-04
AX888042_1(AX888042|pid:none) Sequence 3905 from Patent EP1033401. 49 6e-04
M13009_1(M13009|pid:none) D.discoideum calmodulin mRNA, partial ... 49 6e-04
AY586017_1(AY586017|pid:none) Paxillus involutus strain ATCC 200... 49 6e-04
(P18061) RecName: Full=Calmodulin; Short=CaM; &AM49494... 49 6e-04
X80231_1(X80231|pid:none) L.tarentolae CAM A gene for calmodulin. 49 6e-04
AY072054_1(AY072054|pid:none) Prorocentrum minimum calmodulin mR... 49 6e-04
AK300665_1(AK300665|pid:none) Homo sapiens cDNA FLJ55420 complet... 49 6e-04
CU633865_49(CU633865|pid:none) Podospora anserina genomic DNA ch... 49 6e-04
AY752882_1(AY752882|pid:none) Aegiceras corniculatum calmodulin ... 49 6e-04
FB335840_1(FB335840|pid:none) Sequence 3366 from Patent WO200711... 49 6e-04
FB335832_1(FB335832|pid:none) Sequence 3358 from Patent WO200711... 49 6e-04
S35185(S35185;S25133) calmodulin 4 - Arabidopsis thaliana &Z120... 49 6e-04
FB335866_1(FB335866|pid:none) Sequence 3392 from Patent WO200711... 49 6e-04
U38786_1(U38786|pid:none) Trichomonas vaginalis calmodulin (CAM)... 49 6e-04
EF410079_1(EF410079|pid:none) Ailuropoda melanoleuca troponin C ... 49 6e-04
M22307_1(M22307|pid:none) Human (clone PWTNC4) skeletal muscle t... 49 6e-04
CR932337_1(CR932337|pid:none) Paramecium tetraurelia macronuclea... 48 8e-04
(P02595) RecName: Full=Calmodulin; Short=CaM; 48 8e-04
(Q9HFY6) RecName: Full=Calmodulin; Short=CaM; &AF26406... 48 8e-04
AY789880_1(AY789880|pid:none) Opercularella pumila voucher 781MA... 48 8e-04
AC145330_23(AC145330|pid:none) Medicago truncatula clone mth2-17... 48 8e-04
AB171735_1(AB171735|pid:none) Macaca fascicularis brain cDNA clo... 48 8e-04
(P11121) RecName: Full=Calmodulin; Short=CaM; 48 8e-04
BT056817_1(BT056817|pid:none) Salmo salar clone ssal-eve-541-189... 48 8e-04
CS559996_1(CS559996|pid:none) Sequence 583 from Patent WO2006032... 48 8e-04
AX888004_1(AX888004|pid:none) Sequence 3867 from Patent EP1033401. 48 8e-04
(P41208) RecName: Full=Centrin-2; AltName: Full=Caltractin isofo... 48 8e-04
(P02589) RecName: Full=Troponin C, skeletal muscle; &TPFGCS(A03... 48 8e-04
(Q9U6D3) RecName: Full=Calmodulin; Short=CaM; &AF18730... 48 8e-04
BT082577_1(BT082577|pid:none) Anoplopoma fimbria clone afim-evh-... 48 8e-04
BT082138_1(BT082138|pid:none) Anoplopoma fimbria clone afim-evh-... 48 8e-04
AY789839_1(AY789839|pid:none) Orthopyxis integra voucher 454ca4 ... 48 8e-04
AB178713_1(AB178713|pid:none) Synthetic construct YC4.60 gene fo... 48 8e-04
AL671908_6(AL671908|pid:none) Mouse DNA sequence from clone RP23... 48 8e-04
FB334965_1(FB334965|pid:none) Sequence 2491 from Patent WO200711... 48 0.001
BC109577_1(BC109577|pid:none) Bos taurus centrin 4, mRNA (cDNA c... 48 0.001
BC053760_1(BC053760|pid:none) Xenopus laevis cardiac troponin C,... 48 0.001
AF084412_1(AF084412|pid:none) Synthetic construct calmodulin mut... 48 0.001
AF084441_1(AF084441|pid:none) Synthetic construct calmodulin mut... 48 0.001
AF084451_1(AF084451|pid:none) Synthetic construct calmodulin mut... 48 0.001
(Q39752) RecName: Full=Calmodulin; Short=CaM; &X97612_... 48 0.001
DQ216041_1(DQ216041|pid:none) Taeniopygia guttata clone 0063P000... 48 0.001
AF084395_1(AF084395|pid:none) Synthetic construct calmodulin mut... 48 0.001
AF084393_1(AF084393|pid:none) Synthetic construct calmodulin mut... 48 0.001
AF434188_1(AF434188|pid:none) Danio rerio cardiac troponin C mRN... 48 0.001
AF466266_1(AF466266|pid:none) Sonneratia paracaseolaris calmodul... 48 0.001
BC041495_1(BC041495|pid:none) Xenopus laevis fast skeletal tropo... 48 0.001
AF084428_1(AF084428|pid:none) Synthetic construct calmodulin mut... 48 0.001
NRL(1CDMA1) Calmodulin complexed with calmodulin-binding domain of 48 0.001
AF084413_1(AF084413|pid:none) Synthetic construct calmodulin mut... 48 0.001
M29722_1(M29722|pid:none) Quail troponin C mRNA, 5' end. 48 0.001
BC061286_1(BC061286|pid:none) Xenopus tropicalis troponin C type... 48 0.001
(P25069) RecName: Full=Calmodulin-2/3/5; Short=CaM-2/3/... 47 0.001
FB335828_1(FB335828|pid:none) Sequence 3354 from Patent WO200711... 47 0.001
CS560270_1(CS560270|pid:none) Sequence 857 from Patent WO2006032... 47 0.001
S58311(S58311) calmodulin - Bidens pilosa &X89890_1(X89890|pid:... 47 0.001
AF081669_1(AF081669|pid:none) Synthetic construct VU91B calmodul... 47 0.001
AY656693_1(AY656693|pid:none) Daucus carota calmodulin cam-210 m... 47 0.001
AY364011_1(AY364011|pid:none) Daucus carota calmodulin 4 mRNA, p... 47 0.001
CS559978_1(CS559978|pid:none) Sequence 565 from Patent WO2006032... 47 0.001
AF104986_1(AF104986|pid:none) Magnaporthe grisea calmodulin (MgC... 47 0.001
AJ843113_1(AJ843113|pid:none) Quercus petraea mRNA for calmoduli... 47 0.001
AY275526_1(AY275526|pid:none) Pyrus communis calmodulin mRNA, pa... 47 0.001
EF053035_1(EF053035|pid:none) Thlaspi caerulescens calmodulin (C... 47 0.001
(P17928) RecName: Full=Calmodulin; Short=CaM; &AF03003... 47 0.001
AY656686_1(AY656686|pid:none) Daucus carota calmodulin cam-203 m... 47 0.001
(P25071) RecName: Full=Calmodulin-like protein 12; AltName: Full... 47 0.001
(P59220) RecName: Full=Calmodulin-7; Short=CaM-7; &(P6... 47 0.001
AF064552_1(AF064552|pid:none) Apium graveolens calmodulin mRNA, ... 47 0.001
EF441503_1(EF441503|pid:none) Actinidia deliciosa var. deliciosa... 47 0.001
BC005457_1(BC005457|pid:none) Mus musculus calmodulin-like 3, mR... 47 0.001
AF291057_1(AF291057|pid:none) Fusarium proliferatum NRRL 31071 c... 47 0.001
EU008747_1(EU008747|pid:none) Stachybotrys elegans clone Se4645 ... 47 0.001
EF694541_1(EF694541|pid:none) Morus nigra isolate MCaM-2 calmodu... 47 0.001
EF063123_1(EF063123|pid:none) Botryotinia fuckeliana strain BC4 ... 47 0.001
(P93087) RecName: Full=Calmodulin; Short=CaM; &AB05084... 47 0.001
BT000036_1(BT000036|pid:none) Arabidopsis thaliana calmodulin-li... 47 0.001
L14071_1(L14071|pid:none) Bryonia dioica calmodulin (Bc329) mRNA... 47 0.001
(Q7DMN9) RecName: Full=Calmodulin-5/6/7/8; Short=CaM-5/... 47 0.001
X97558_1(X97558|pid:none) C.annuum mRNA for calmodulin-1. 47 0.001
CP000597_80(CP000597|pid:none) Ostreococcus lucimarinus CCE9901 ... 47 0.001
AK169640_1(AK169640|pid:none) Mus musculus 2 days neonate thymus... 47 0.001
AB008556_1(AB008556|pid:none) Lampetra japonica mRNA for troponi... 47 0.001
(P60204) RecName: Full=Calmodulin; Short=CaM; &(P60205... 47 0.001
AB211694_1(AB211694|pid:none) Cryptomeria japonica gene for puta... 47 0.001
AF081670_1(AF081670|pid:none) Synthetic construct VU91C calmodul... 47 0.001
AF368285_1(AF368285|pid:none) Capsicum annuum calmodulin-like pr... 47 0.002
EF441489_1(EF441489|pid:none) Actinidia kolomikta clone A018 cal... 47 0.002
EF441475_1(EF441475|pid:none) Actinidia sabiifolia clone A042 ca... 47 0.002
AF089808_1(AF089808|pid:none) Pyricularia grisea calmodulin gene... 47 0.002
(Q7DMP0) RecName: Full=Calmodulin-2/4; Short=CaM-2/4; F... 47 0.002
U48691_1(U48691|pid:none) Triticum aestivum calmodulin TaCaM2-2 ... 47 0.002
BT057245_1(BT057245|pid:none) Salmo salar clone ssal-evf-532-153... 47 0.002
AF072520_1(AF072520|pid:none) Nicotiana tabacum centrin (CEN2) m... 47 0.002
(P41041) RecName: Full=Calmodulin; Short=CaM; &FB33590... 47 0.002
EF441490_1(EF441490|pid:none) Actinidia sabiifolia clone A044 ca... 47 0.002
AB003078_1(AB003078|pid:none) Xenopus laevis mRNA for fast skele... 47 0.002
MCSP(A03024)calmodulin - spinach (tentative sequence) 47 0.002
AK315694_1(AK315694|pid:none) Homo sapiens cDNA, FLJ96792, highl... 47 0.002
Z12023_1(Z12023|pid:none) A.thaliana mRNA (clone ACaM5) for calm... 47 0.002
DQ778070_1(DQ778070|pid:none) Vigna radiata var. radiata calmodu... 47 0.002
EF441516_1(EF441516|pid:none) Actinidia polygama clone B008 calm... 47 0.002
FB335846_1(FB335846|pid:none) Sequence 3372 from Patent WO200711... 47 0.002
CS560054_1(CS560054|pid:none) Sequence 641 from Patent WO2006032... 47 0.002
EF441486_1(EF441486|pid:none) Actinidia sabiifolia clone H043 ca... 47 0.002
AJ271913_1(AJ271913|pid:none) Oryza sativa partial mRNA for puta... 47 0.002
CS559658_1(CS559658|pid:none) Sequence 245 from Patent WO2006032... 47 0.002
AY789871_1(AY789871|pid:none) Obelia dichotoma voucher 33IT calm... 47 0.002
BT034624_1(BT034624|pid:none) Zea mays full-length cDNA clone ZM... 47 0.002
DQ398935_1(DQ398935|pid:none) Vigna unguiculata calmodulin mRNA,... 47 0.002
AY517933_1(AY517933|pid:none) Arachis hypogaea calmodulin (CaM1)... 47 0.002
JC1033(JC1033)calmodulin - garden pea 47 0.002
(A2WN93) RecName: Full=Calmodulin-1; Short=CaM-1; &(P6... 47 0.002
EF441505_1(EF441505|pid:none) Actinidia valvata clone KA15 calmo... 47 0.002
FB335834_1(FB335834|pid:none) Sequence 3360 from Patent WO200711... 47 0.002
X98404_1(X98404|pid:none) C.annuum mRNA for calmodulin-2. 47 0.002
EU958713_1(EU958713|pid:none) Zea mays clone 1710893 calmodulin ... 47 0.002
EF441521_1(EF441521|pid:none) Actinidia eriantha f. alba clone A... 47 0.002
EF441484_1(EF441484|pid:none) Clematoclethra scandens subsp. tom... 47 0.002
(O01305) RecName: Full=Calcium vector protein; Short=CA... 47 0.002
AJ427337_1(AJ427337|pid:none) Brassica oleracea mRNA for calmodu... 47 0.002
T20411(T20411)hypothetical protein E02A10.3 - Caenorhabditis ele... 47 0.002
BT049586_1(BT049586|pid:none) Salmo salar clone ssal-eve-573-215... 47 0.002
EU976715_1(EU976715|pid:none) Zea mays clone 988332 unknown mRNA. 47 0.002
BT084442_1(BT084442|pid:none) Zea mays full-length cDNA clone ZM... 47 0.002
FB335838_1(FB335838|pid:none) Sequence 3364 from Patent WO200711... 47 0.002
EF441478_1(EF441478|pid:none) Actinidia kolomikta clone A019 cal... 47 0.002
M73712_1(M73712|pid:none) Arabidopsis thaliana calmodulin-3 mRNA... 47 0.002
EU964988_1(EU964988|pid:none) Zea mays clone 282987 caltractin m... 47 0.002
CQ856083_1(CQ856083|pid:none) Sequence 29 from Patent WO20040700... 47 0.002
AF468661_1(AF468661|pid:none) Stevia rebaudiana calmodulin mRNA,... 47 0.002
MCWT(A03025;PC2046)calmodulin - wheat 47 0.002
PDBN(1SKT) MOL_ID: 1;MOL_ID: 1; MOLECULE: TROPONIN-C; MOLECULE: ... 47 0.002
(P04573) RecName: Full=Calcium vector protein; Short=CA... 47 0.002
EU959441_1(EU959441|pid:none) Zea mays clone 218171 calmodulin m... 47 0.002
CS559900_1(CS559900|pid:none) Sequence 487 from Patent WO2006032... 47 0.002
AY657030_1(AY657030|pid:none) Salvia miltiorrhiza calmodulin mRN... 47 0.002
AP008207_956(AP008207|pid:none) Oryza sativa (japonica cultivar-... 47 0.002
EF441488_1(EF441488|pid:none) Actinidia melliana clone KH47 calm... 47 0.002
CS559822_1(CS559822|pid:none) Sequence 409 from Patent WO2006032... 47 0.002
EF441485_1(EF441485|pid:none) Actinidia sabiifolia clone A085 ca... 47 0.002
AF031482_1(AF031482|pid:none) Zea mays calmodulin (Zmrcalm) mRNA... 47 0.002
CS560116_1(CS560116|pid:none) Sequence 703 from Patent WO2006032... 47 0.002
DQ503481_1(DQ503481|pid:none) Phytomonas serpens strain 15 calmo... 47 0.002
AX885282_1(AX885282|pid:none) Sequence 1145 from Patent EP1033401. 47 0.002
CR940352_56(CR940352|pid:none) Theileria annulata strain Ankara ... 47 0.002
T07751(T07751) calmodulin 2 - tomato (fragment) &Y14765_1(Y1476... 47 0.002
AY542516_1(AY542516|pid:none) Dictyocaulus viviparus isolate L3i... 47 0.002
EF441470_1(EF441470|pid:none) Actinidia deliciosa var. chlorocar... 47 0.002
AK006940_1(AK006940|pid:none) Mus musculus adult male testis cDN... 47 0.002
EU930245_1(EU930245|pid:none) Simulium vittatum clone SV-224 Ca2... 47 0.002
BT080630_1(BT080630|pid:none) Caligus clemensi clone ccle-evs-51... 47 0.002
(Q2R1Z5) RecName: Full=Putative calmodulin-like protein 6; 47 0.002
AY542515_1(AY542515|pid:none) Dictyocaulus viviparus isolate L3i... 47 0.002
(P15094) RecName: Full=Calmodulin; Short=CaM; &J05116_... 47 0.002
AF434189_1(AF434189|pid:none) Polypterus senegalus cardiac tropo... 46 0.003
AJ512489_1(AJ512489|pid:none) Caenorhabditis elegans mRNA for ca... 46 0.003
U37538_1(U37538|pid:none) Xenopus laevis centrin (Xcen) mRNA, co... 46 0.003
AF169156_1(AF169156|pid:none) Mus musculus S-CaBP2 (Cabp2) mRNA,... 46 0.003
AF362367_1(AF362367|pid:none) Mus musculus centrin 4 mRNA, compl... 46 0.003
AJ133837_1(AJ133837|pid:none) Branchiostoma floridae mRNA for ca... 46 0.003
EU441667_1(EU441667|pid:none) Xenopus borealis clone Centrin.b2 ... 46 0.003
(Q9JLK4) RecName: Full=Calcium-binding protein 2; Short... 46 0.003
CQ856071_1(CQ856071|pid:none) Sequence 17 from Patent WO20040700... 46 0.003
AF493612_1(AF493612|pid:none) Acetabularia acetabulum centrin mR... 46 0.003
AC078839_23(AC078839|pid:none) Oryza sativa (japonica cultivar-g... 46 0.003
(Q9NPB3) RecName: Full=Calcium-binding protein 2; Short... 46 0.003
EF677513_1(EF677513|pid:none) Picea sitchensis clone WS0276_J03 ... 46 0.003
BC152746_1(BC152746|pid:none) Synthetic construct Homo sapiens c... 46 0.003
FB335003_1(FB335003|pid:none) Sequence 2529 from Patent WO200711... 46 0.003
BC010730_1(BC010730|pid:none) Mus musculus calmodulin 2, mRNA (c... 46 0.004
DQ479425_1(DQ479425|pid:none) Synthetic construct calcium sensor... 46 0.004
AB116024_1(AB116024|pid:none) Paramecium caudatum cnrC gene for ... 46 0.004
BT076104_1(BT076104|pid:none) Caligus rogercresseyi clone crog-e... 46 0.004
B34669(B34669)calmodulin-related protein 3, touch-induced - Arab... 46 0.004
AF280815_1(AF280815|pid:none) Sus scrofa calmodulin 1 (CALM1) ge... 46 0.004
AY189287_1(AY189287|pid:none) Homo sapiens LP7057 protein mRNA, ... 46 0.004
X52606_1(X52606|pid:none) H.sapiens CaMIII gene, exon 1 (and joi... 46 0.004
AF334833_1(AF334833|pid:none) Castanea sativa calmodulin mRNA, c... 46 0.004
BT003928_1(BT003928|pid:none) Arabidopsis thaliana clone RAFL15-... 46 0.004
DQ479429_1(DQ479429|pid:none) Synthetic construct mitochondrial ... 46 0.004
BT076653_1(BT076653|pid:none) Caligus rogercresseyi clone crog-e... 46 0.004
DQ881447_1(DQ881447|pid:none) Betula halophila calmodulin (CaM) ... 46 0.004
AB008555_1(AB008555|pid:none) Lampetra japonica mRNA for troponi... 46 0.004
(Q11083) RecName: Full=Uncharacterized calcium-binding protein B... 46 0.004
DQ217271_1(DQ217271|pid:none) Taeniopygia guttata clone 0061P001... 46 0.004
AJ249457_1(AJ249457|pid:none) Trichomonas vaginalis mRNA for cen... 45 0.005
(Q32LE3) RecName: Full=Centrin-1; &BC109624_1(BC109624|pid:none) 45 0.005
DQ217232_1(DQ217232|pid:none) Taeniopygia guttata clone 0058P005... 45 0.005
AF030035_1(AF030035|pid:none) Phaseolus vulgaris calmodulin (CaM... 45 0.005
AJ249456_1(AJ249456|pid:none) Trichomonas vaginalis mRNA for par... 45 0.005
CS559688_1(CS559688|pid:none) Sequence 275 from Patent WO2006032... 45 0.005
AJ005039_1(AJ005039|pid:none) Nicotiana plumbaginifolia mRNA for... 45 0.005
EU953726_1(EU953726|pid:none) Zea mays clone 1444940 calmodulin ... 45 0.005
EF083909_1(EF083909|pid:none) Picea sitchensis clone WS0283_D07 ... 45 0.005
(P41040) RecName: Full=Calmodulin; Short=CaM; &S40086(... 45 0.005
EF081899_1(EF081899|pid:none) Picea sitchensis clone WS02711_N09... 45 0.005
CR382131_1419(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 45 0.005
AY070232_1(AY070232|pid:none) Vitis vinifera calmodulin mRNA, co... 45 0.005
AY656690_1(AY656690|pid:none) Daucus carota caomodulin cam-207 m... 45 0.005
(P41210) RecName: Full=Caltractin; AltName: Full=Centrin; &CQ85... 45 0.005
AE017343_634(AE017343|pid:none) Cryptococcus neoformans var. neo... 45 0.005
AY542983_1(AY542983|pid:none) Bigelowiella natans calmodulin mRN... 45 0.005
FB334898_1(FB334898|pid:none) Sequence 2424 from Patent WO200711... 45 0.005
(O23320) RecName: Full=Calmodulin-like protein 8; Short... 45 0.005
AC091701_14(AC091701|pid:none) Trypanosoma brucei chromosome 8 c... 45 0.005
AF388948_1(AF388948|pid:none) Elaeis oleifera calmodulin mRNA, p... 45 0.005
FB334860_1(FB334860|pid:none) Sequence 2386 from Patent WO200711... 45 0.005
(P48976) RecName: Full=Calmodulin; Short=CaM; &X60737_... 45 0.005
AF020781_1(AF020781|pid:none) Symbiodinium microadriaticum calmo... 45 0.005
AJ131662_1(AJ131662|pid:none) Branchiostoma lanceolatum mRNA for... 45 0.005
EU868624_1(EU868624|pid:none) Synthetic construct calcium indica... 45 0.005
AM920437_1218(AM920437|pid:none) Penicillium chrysogenum Wiscons... 45 0.005
CQ856059_1(CQ856059|pid:none) Sequence 5 from Patent WO2004070035. 45 0.007
EF441522_1(EF441522|pid:none) Actinidia eriantha f. alba clone A... 45 0.007
FB334806_1(FB334806|pid:none) Sequence 2332 from Patent WO200711... 45 0.007
AF434190_1(AF434190|pid:none) Tetraodon fluviatilis cardiac trop... 45 0.007
AY261858_1(AY261858|pid:none) Ciona intestinalis calmodulin-like... 45 0.007
DQ011859_1(DQ011859|pid:none) Sus scrofa centrin 2 mRNA, partial... 45 0.007
(P05933) RecName: Full=Calmodulin; Short=CaM; &CU32967... 45 0.007
NRL(1CTR2) calmodulin (with trifluoperazine), fragment 2 - human 45 0.009
CR932091_1(CR932091|pid:none) Paramecium tetraurelia centrin-rel... 45 0.009
EU645411_1(EU645411|pid:none) Distichopora asulcata voucher USNM... 45 0.009
CQ856063_1(CQ856063|pid:none) Sequence 9 from Patent WO2004070035. 45 0.009
EU645388_1(EU645388|pid:none) Stylaster elassotomus voucher USNM... 45 0.009
AY281129_1(AY281129|pid:none) Oncorhynchus mykiss troponin C mRN... 45 0.009
NRL(1TRF) Troponin c (tr1c fragment) (apo form) (nmr, 1 structur... 45 0.009
AY656694_1(AY656694|pid:none) Daucus carota calmodulin cam-211 m... 45 0.009
DQ068059_1(DQ068059|pid:none) Clytia gracilis voucher Brazil.7 c... 45 0.009
AM467254_2(AM467254|pid:none) Vitis vinifera contig VV78X138892.... 45 0.009
(Q40642) RecName: Full=Calmodulin-like protein 1; AltName: Full=... 45 0.009
NRL(1TRCA) calmodulin (residues 78-148), chain A - bovine 45 0.009
EU971001_1(EU971001|pid:none) Zea mays clone 355607 calmodulin m... 44 0.012
(P15159) RecName: Full=Troponin C; &JX0072(JX0072) 44 0.012
(O23184) RecName: Full=Calcium-binding protein CML19; AltName: F... 44 0.012
CP001160_195(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 44 0.012
BT078206_1(BT078206|pid:none) Lepeophtheirus salmonis Pacific fo... 44 0.012
T24672(T24672) hypothetical protein T07G12.1 - Caenorhabditis el... 44 0.012
CQ856075_1(CQ856075|pid:none) Sequence 21 from Patent WO20040700... 44 0.012
CR932335_1(CR932335|pid:none) Paramecium tetraurelia macronuclea... 44 0.012
AY086644_1(AY086644|pid:none) Arabidopsis thaliana clone 26540 m... 44 0.012
EF198574_1(EF198574|pid:none) Penicillium sp. NRRL 35620 calmodu... 44 0.012
EF679623_1(EF679623|pid:none) Cladosporium cf. subtilissimum CBS... 44 0.015
EF634447_1(EF634447|pid:none) Penicillium syriacum isolate NRRL ... 44 0.015
EF679626_1(EF679626|pid:none) Cladosporium subtilissimum strain ... 44 0.015
AY752232_1(AY752232|pid:none) Cercospora acaciae-mangii strain C... 44 0.015
EF652336_1(EF652336|pid:none) Emericella navahoensis isolate NRR... 44 0.015
DQ185118_1(DQ185118|pid:none) Cercospora zeina strain CPC 11998 ... 44 0.015
FJ389952_1(FJ389952|pid:none) Thermoascus crustaceus strain CBS ... 44 0.015
CP001324_649(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 44 0.015
(P13868) RecName: Full=Calmodulin-1; Short=CaM-1; &J04... 44 0.015
EF441519_1(EF441519|pid:none) Actinidia deliciosa var. chlorocar... 44 0.015
EF198592_1(EF198592|pid:none) Penicillium glabrum strain NRRL 35... 44 0.015
EU427283_1(EU427283|pid:none) Penicillium gerundense NRRL:35756 ... 44 0.015
AY840417_1(AY840417|pid:none) Cercospora apii strain CBS 116455 ... 44 0.015
EF661253_1(EF661253|pid:none) Aspergillus sp. NRRL 2161 isolate ... 44 0.015
AY443472_1(AY443472|pid:none) Penicillium rolfsii isolate NRRL 1... 44 0.015
AY752234_1(AY752234|pid:none) Cercospora acaciae-mangii strain C... 44 0.015
AY484811_1(AY484811|pid:none) Penicillium brevicompactum strain ... 44 0.015
AF141944_1(AF141944|pid:none) Tetrahymena thermophila centrin mR... 44 0.015
AB180453_1(AB180453|pid:none) Plutella xylostella mRNA for tropo... 44 0.015
EF652397_1(EF652397|pid:none) Aspergillus subsessilis isolate NR... 44 0.015
AY484810_1(AY484810|pid:none) Penicillium canescens strain NRRL ... 44 0.015
AY893101_1(AY893101|pid:none) Synthetic construct Homo sapiens c... 44 0.015
EF198570_1(EF198570|pid:none) Geosmithia sp. NRRL 35616 calmodul... 44 0.015
EF661537_1(EF661537|pid:none) Petromyces alliaceus isolate NRRL ... 44 0.015
FB335850_1(FB335850|pid:none) Sequence 3376 from Patent WO200711... 44 0.015
AY443490_1(AY443490|pid:none) Penicillium jensenii isolate NRRL ... 44 0.015
AY678562_1(AY678562|pid:none) Penicillium waksmanii strain AS3.4... 44 0.015
AY752224_1(AY752224|pid:none) Cladosporium bruhnei strain CBS 11... 44 0.015
EF652020_1(EF652020|pid:none) Eurotium amstelodami isolate NRRL ... 44 0.015
(P27161) RecName: Full=Calmodulin; Short=CaM; &AB05083... 44 0.015
EF626949_1(EF626949|pid:none) Penicillium cinnamopurpureum NRRL ... 44 0.015
DQ658165_1(DQ658165|pid:none) Penicillium olsonii strain NRRL 13... 44 0.015
AF500274_1(AF500274|pid:none) Gadus morhua slow/cardiac skeletal... 44 0.015
EF652017_1(EF652017|pid:none) Eurotium amstelodami isolate NRRL ... 44 0.015
EF198591_1(EF198591|pid:none) Penicillium angulare strain NRRL 3... 44 0.015
AF020769_1(AF020769|pid:none) Homo sapiens cardiac ventricular t... 44 0.015
EF669861_1(EF669861|pid:none) Aspergillus fumigatus isolate NRRL... 44 0.015
AY484829_1(AY484829|pid:none) Penicillium biourgeianum strain NR... 44 0.015
EF669860_1(EF669860|pid:none) Aspergillus fumigatus isolate NRRL... 44 0.015
EF669857_1(EF669857|pid:none) Aspergillus giganteus isolate NRRL... 44 0.015
AY517931_1(AY517931|pid:none) Arachis hypogaea calmodulin (CaM2)... 44 0.015
EF626954_1(EF626954|pid:none) Eupenicillium idahoense NRRL 5274 ... 44 0.015
EF669883_1(EF669883|pid:none) Dichotomomyces cejpii isolate NRRL... 44 0.015
DQ658167_1(DQ658167|pid:none) Penicillium canescens strain NRRL ... 44 0.015
EF669894_1(EF669894|pid:none) Aspergillus lentulus isolate NRRL ... 44 0.015
DQ645807_1(DQ645807|pid:none) Penicillium olsonii strain NRRL 35... 44 0.015
EF661395_1(EF661395|pid:none) Aspergillus ostianus isolate NRRL ... 44 0.015
EF661523_1(EF661523|pid:none) Aspergillus caelatus isolate NRRL ... 44 0.015
EF652016_1(EF652016|pid:none) Eurotium amstelodami isolate NRRL ... 44 0.015
EF652029_1(EF652029|pid:none) Aspergillus restrictus isolate NRR... 44 0.015
AY678557_1(AY678557|pid:none) Penicillium steckii strain AS3.667... 44 0.015
AY443473_1(AY443473|pid:none) Penicillium manginii isolate NRRL ... 44 0.015
(P29290) RecName: Full=Troponin C, isoform 2A; &S18434(S18434) 44 0.020
EU644069_1(EU644069|pid:none) Eupenicillium sinaicum strain NHL2... 44 0.020
FB334890_1(FB334890|pid:none) Sequence 2416 from Patent WO200711... 44 0.020
AJ426040_1(AJ426040|pid:none) Takifugu rubripes vader gene, cetn... 44 0.020
EU972823_1(EU972823|pid:none) Zea mays clone 388716 calmodulin-r... 44 0.020
EU568372_2(EU568372|pid:none) Brassica oleracea clone BAC B59J16... 44 0.020
FADOAA(S00103;A29006) alpha-actinin - slime mold (Dictyostelium ... 44 0.020
EU276118_1(EU276118|pid:none) Crassostrea gigas calmodulin 2 gen... 44 0.020
AY829802_1(AY829802|pid:none) Lonomia obliqua troponin C 2 mRNA,... 44 0.020
X97546_1(X97546|pid:none) F.sylvatica mRNA for CaMF protein. 43 0.026
BT076349_1(BT076349|pid:none) Caligus rogercresseyi clone crog-e... 43 0.026
BT077867_1(BT077867|pid:none) Lepeophtheirus salmonis Pacific fo... 43 0.026
CQ856081_1(CQ856081|pid:none) Sequence 27 from Patent WO20040700... 43 0.026
B34380(B34380)troponin C gamma - narrow-fingered crayfish 43 0.026
FB334906_1(FB334906|pid:none) Sequence 2432 from Patent WO200711... 43 0.026
(P25070) RecName: Full=Calcium-binding protein CML24; AltName: F... 43 0.026
AM437631_1(AM437631|pid:none) Vitis vinifera contig VV78X076481.... 43 0.026
BT088190_1(BT088190|pid:none) Zea mays full-length cDNA clone ZM... 43 0.026
BT080658_1(BT080658|pid:none) Caligus clemensi clone ccle-evs-51... 43 0.026
(Q41420) RecName: Full=Putative calmodulin-3; Short=CaM... 43 0.026
FB334862_1(FB334862|pid:none) Sequence 2388 from Patent WO200711... 43 0.026
EU937997_1(EU937997|pid:none) Phytophthora sojae calcium-depende... 43 0.034
EF441529_1(EF441529|pid:none) Actinidia deliciosa var. deliciosa... 43 0.034
EF523472_1(EF523472|pid:none) Synthetic construct putative aller... 43 0.034
NRL(1TRCB) calmodulin (residues 78-148), chain B - bovine 43 0.034
AY176041_1(AY176041|pid:none) Paralichthys olivaceus calmodulin ... 43 0.034
FB334928_1(FB334928|pid:none) Sequence 2454 from Patent WO200711... 43 0.034
EU247120_1(EU247120|pid:none) Lycosa singoriensis troponin C mRN... 42 0.044
T16039(T16039) hypothetical protein F12A10.5 - Caenorhabditis el... 42 0.044
BC095100_1(BC095100|pid:none) Danio rerio zgc:109977, mRNA (cDNA... 42 0.044

>AB127360_1(AB127360|pid:none) Scytosiphon lomentaria Slcen mRNA for
centrin, complete cds. &AB127361_1(AB127361|pid:none)
Length = 164

Score = 54.3 bits (129), Expect = 1e-05
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1

Query: 259 DYTGPTEQQLEMIFRLFSRNGK-TIGADELKSVIRAMGKRPLTRRIDKILNECDENGNGT 435
+ T +Q++ F LF +G TI A ELK +RA+G P I K++++ D++G+GT
Sbjct: 16 ELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISDIDKDGSGT 75

Query: 436 IGMDEFVRYMQKKAMEK 486
I EF+ M K EK
Sbjct: 76 IDFQEFLEMMTSKMSEK 92

Score = 39.3 bits (90), Expect = 0.37
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +1

Query: 274 TEQQLEMIFRLFS--RNGKTIGADELKSVIRAMGKRPLTRRIDKILNECDENGNGTIGMD 447
+ +++ FRLF GK I LK V + +G+ + ++++E D +G+G I +
Sbjct: 94 SREEILKAFRLFDDDETGK-ISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEE 152

Query: 448 EFVRYMQKKAM 480
EF+R M+K ++
Sbjct: 153 EFLRIMKKTSL 163

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,042,657,239
Number of extensions: 38993798
Number of successful extensions: 120141
Number of sequences better than 10.0: 848
Number of HSP's gapped: 119802
Number of HSP's successfully gapped: 1255
Length of query: 493
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 360
Effective length of database: 620,718,517
Effective search space: 223458666120
Effective search space used: 223458666120
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.82 gvh: 0.43 alm: 0.44 top: 0.53 tms: 0.00 mit: 0.47 mip: 0.08
nuc: 0.28 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: nuclear
24.0 %: mitochondrial
24.0 %: cytoplasmic
4.0 %: plasma membrane
4.0 %: vesicles of secretory system

>> prediction for Contig-U11573-1 is nuc

VS (DIR, S) 0
VH (FL, L) 2
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0