>Contig-U11567-1 (Contig-U11567-1Q) /CSM_Contig/Contig-U11567-1Q.Seq.d
ACACAACATCATCATCATCATCATTATCAACTACATCATCATCATCATCA
ACAATAACAACTACAAATTCACCAACACAACAACATCATCATAATAATTA
TCATAATCATTATGGTAATACATCAAATTTTTATTATTCAATTAATCAAA
AACAAGAATTATTTTGTTTTGATTTATTATCACATATTATACTTTTAAAT
CAAGATAGATTAGGATTAGTATGGAATAAATATTTTGAACATTGTGAATC
CATTATAAATATATTTGAACAAGTGGTTAGTGTTTCAACTGCCAATGCAA
GATTAATGACACCATTAATCNNAAAAGTAGTAATGTCAATAATGTATCTT
TTAATTAGATTAATTAGAAAGAAAGAGGTTTTCAGTACTCTATCAGCTTG
TATCAAATTGTTGTTACGTGTTGGTAATGTATTGGATAGTATTGCAGAGA
AAATGTCAATCTCTTTAATTCAATTGGTTCAAAAGAATATTGATTTCCTA
TCAACTACACCATCAGCTTGGGAACCTATTTTAGCATTGATTGTACTTTT
GTCAGGTAATCCAAAATCATCGAATCGTGCATGTGATGCTCTATCCTTGA
TGATTAAAACTCAAC----------AGACAATTCCACATGGTGTCGTAGT
GAAGTCAATGGAGTTACTCTATTTCATCTTTACAAATGTCACTAAAATAT
TGGGTATTCATAAGATTGAAAGTGGTACCAATGATCATTCTTCACCAAAT
GGTGGAATGGTTGGCTTTCAAACTACTCGTATTTTAATTAGAAAGATGGA
TGTAAAAATCAATACGGCTTGGGTTAAATTTTGGTCAAAGATATTGGTGA
AATTCTCTTCCCTATGTTTAGATCCAAAACCAGATATTAGAAACAACGCT
ATGACATTCCTTCAAAAGACAATACTCTCCTCATCGTTACAAGAGTTTTT
ACCACCAGGTAGATGGTTTGATTGTTTTGTTGATGTGGTTTTCCAACTCT
TAGATAATCTTAAAGAGAATTCAAGAGAAACCAATTTCGAAGATACAAGA
TTACGTGCTTCTGCTTTACTCTCAAAAGTGTTCTTACAAAATTTAAATAC
CATCATAAAATGTGATCAATTTACAACCCTATGGGATAGTATTTTATCTC
ATTTGAAAATTTATATGGGTCTATCGGAATTACTCTCTGAATCTGTACCA
GAGTCTCTTAAAAATATGCTTTTGGTAATGAATAATAGTGGTGTATTTAA
ACCACCAACAGGTGAAGAATCAGAAGATGATATCTNTAAACAACTTTGGG
ATTCAACTTGGGCTGCTATTGATGAATTTTGTCCAAAAATTAGTGAAGAT
GTTTTATCACGTGTTGATCCAAATTATTTCTTAAAAAAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACTACAGCAACAGCAACAACAAC
AACAACACTCACAAAGTGAGGAATTAAAACAACAACAATTATTATCACAA
ATAATTCAACAAAACATTAATTCTCCAACAATTATTGATACTCCAAGTGT
TTTACAACAATACCAACAACCACAACTACAACAACCACAACAACCTCAAC
AACCACAACAACAAGATCAAGAAGAATTTAATCCAATTATGTCAATTCCA
ATGGTACCAATAATGCCAAATAATACAAATAATAATATAAACAAATAAAA
AAAATA

est1=CFD671F,1,616
est2=VSJ102F,617,1067
est3=CHP688Z,1002,1697
est4=CHN506Z,1009,1697
est5=CFD671Z,1444,1700
est6=VSJ102Z,1447,1694

TTSSSSSLSTTSSSSSTITTTNSPTQQHHHNNYHNHYGNTSNFYYSINQKQELFCFDLLS
HIILLNQDRLGLVWNKYFEHCESIINIFEQVVSVSTANARLMTPLIXKVVMSIMYLLIRL
IRKKEVFSTLSACIKLLLRVGNVLDSIAEKMSISLIQLVQKNIDFLSTTPSAWEPILALI
VLLSGNPKSSNRACDALSLMIKTQ---

---TIPHGVVVKSMELLYFIFTNVTKILGIHKIESGTNDHSSPNGGMVGFQTTRILIRKM
DVKINTAWVKFWSKILVKFSSLCLDPKPDIRNNAMTFLQKTILSSSLQEFLPPGRWFDCF
VDVVFQLLDNLKENSRETNFEDTRLRASALLSKVFLQNLNTIIKCDQFTTLWDSILSHLK
IYMGLSELLSESVPESLKNMLLVMNNSGVFKPPTGEESEDDIXKQLWDSTWAAIDEFCPK
ISEDVLSRVDPNYFLKKQQQQQQQQQQQQQLQQQQQQQQHSQSEELKQQQLLSQIIQQNI
NSPTIIDTPSVLQQYQQPQLQQPQQPQQPQQQDQEEFNPIMSIPMVPIMPNNTNNNINK*
kk

Frame A:
tqhhhhhhyqlhhhhhqq*qlqihqhnniiiiiiiiimvihqifiiqliknknyfvliyy
hilyf*ikid*d*yginilnivnpl*iylnkwlvfqlpmqd**hh*sxk**cq*cif*ld
*lerkrfsvlyqlvsnccyvlvmywivlqrkcqsl*fnwfkrilisyqlhhqlgnlf*h*
lyfcqviqnhrivhvmlyp**lkln---

---rqfhmvs**sqwsysisslqmslkywvfirlkvvpmiilhqmvewlafkllvf*ler
wm*ksirlglnfgqryw*nslpyv*iqnqilettl*hsfkrqysphryksfyhqvdgliv
llmwfsns*iilkriqekpiskiqdyvlllysqkcsyki*ips*nvinlqpygivfyli*
kfiwvyrnyslnlyqsllkicfw**iivvylnhqqvknqkmisxnnfgiqlglllmnfvq
klvkmfyhvliqiis*knnnnnnnnnnnnnnysnsnnnnnthkvrn*nnnnyyhk*fnkt
lilqqllilqvfynntnnhnynnhnnlnnhnnkikknliqlcqfqwyq*cqiiqiii*tn
kkn

Frame B:
hniiiiiiinyiiiiinnnnykftntttss**ls*slw*yikfllfn*sktriilf*fii
tyytfksr*irisme*if*tl*ihykyi*tsg*cfncqckindtinxkssnvnnvsfn*i
n*kergfqysislyqivvtcw*cig*ycrenvnlfnsigskey*fpinytislgtyfsid
ctfvr*skiiescm*csildd*ns---

---dnstwcrsevngvtlfhlykch*nigys*d*kwyq*sfftkwwngwlsnysyfn*kd
gcknqyglg*ilvkdigeilfpmfrsktry*kqrydipskdntllivtrvfttr*mv*lf
c*cgfptlr*s*refkrnqfrrykitcfcftlksvltkfkyhhkm*siynpmg*yfisfe
nlygsigitl*ictrvs*kyafgne**wci*ttnr*rirr*yl*ttlgfnlgcy**ilsk
n**rcfitc*sklflkktttttttttttttttatatttttltk*giktttiiitnnstkh
*fsnny*yskcfttipttttttttttstttttrsrri*snyvnsngtnnak*yk**ykqi
kki

Frame C:
TTSSSSSLSTTSSSSSTITTTNSPTQQHHHNNYHNHYGNTSNFYYSINQKQELFCFDLLS
HIILLNQDRLGLVWNKYFEHCESIINIFEQVVSVSTANARLMTPLIXKVVMSIMYLLIRL
IRKKEVFSTLSACIKLLLRVGNVLDSIAEKMSISLIQLVQKNIDFLSTTPSAWEPILALI
VLLSGNPKSSNRACDALSLMIKTQ---

---TIPHGVVVKSMELLYFIFTNVTKILGIHKIESGTNDHSSPNGGMVGFQTTRILIRKM
DVKINTAWVKFWSKILVKFSSLCLDPKPDIRNNAMTFLQKTILSSSLQEFLPPGRWFDCF
VDVVFQLLDNLKENSRETNFEDTRLRASALLSKVFLQNLNTIIKCDQFTTLWDSILSHLK
IYMGLSELLSESVPESLKNMLLVMNNSGVFKPPTGEESEDDIXKQLWDSTWAAIDEFCPK
ISEDVLSRVDPNYFLKKQQQQQQQQQQQQQLQQQQQQQQHSQSEELKQQQLLSQIIQQNI
NSPTIIDTPSVLQQYQQPQLQQPQQPQQPQQQDQEEFNPIMSIPMVPIMPNNTNNNINK*
kk

Query= Contig-U11567-1 (Contig-U11567-1Q)
/CSM_Contig/Contig-U11567-1Q.Seq.d
         (1706 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U11567-1 (Contig-U11567-1Q) /CSM_Contig/Conti...  2490  0.0
Contig-U01854-1 (Contig-U01854-1Q) /CSM_Contig/Conti...    48  3e-05
Contig-U11781-1 (Contig-U11781-1Q) /CSM_Contig/Conti...    44  5e-04
Contig-U14822-1 (Contig-U14822-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U14805-1 (Contig-U14805-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U13109-1 (Contig-U13109-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U12013-1 (Contig-U12013-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U14871-1 (Contig-U14871-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U12767-1 (Contig-U12767-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U06778-1 (Contig-U06778-1Q) /CSM_Contig/Conti...    40  0.008

>Contig-U11567-1 (Contig-U11567-1Q) /CSM_Contig/Contig-U11567-1Q.Seq.d
          Length = 1706

 Score = 2490 bits (1256), Expect = 0.0
 Identities = 1295/1295 (100%)
 Strand = Plus / Plus

                                                                        
Query: 93   aataattatcataatcattatggtaatacatcaaatttttattattcaattaatcaaaaa 152
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93   aataattatcataatcattatggtaatacatcaaatttttattattcaattaatcaaaaa 152

                                                                        
Query: 153  caagaattattttgttttgatttattatcacatattatacttttaaatcaagatagatta 212
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153  caagaattattttgttttgatttattatcacatattatacttttaaatcaagatagatta 212

                                                                        
Query: 213  ggattagtatggaataaatattttgaacattgtgaatccattataaatatatttgaacaa 272
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213  ggattagtatggaataaatattttgaacattgtgaatccattataaatatatttgaacaa 272

                                                                        
Query: 273  gtggttagtgtttcaactgccaatgcaagattaatgacaccattaatcnnaaaagtagta 332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273  gtggttagtgtttcaactgccaatgcaagattaatgacaccattaatcnnaaaagtagta 332

                                                                        
Query: 333  atgtcaataatgtatcttttaattagattaattagaaagaaagaggttttcagtactcta 392
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333  atgtcaataatgtatcttttaattagattaattagaaagaaagaggttttcagtactcta 392

                                                                        
Query: 393  tcagcttgtatcaaattgttgttacgtgttggtaatgtattggatagtattgcagagaaa 452
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393  tcagcttgtatcaaattgttgttacgtgttggtaatgtattggatagtattgcagagaaa 452

                                                                        
Query: 453  atgtcaatctctttaattcaattggttcaaaagaatattgatttcctatcaactacacca 512
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453  atgtcaatctctttaattcaattggttcaaaagaatattgatttcctatcaactacacca 512

                                                                        
Query: 513  tcagcttgggaacctattttagcattgattgtacttttgtcaggtaatccaaaatcatcg 572
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513  tcagcttgggaacctattttagcattgattgtacttttgtcaggtaatccaaaatcatcg 572

                                                                        
Query: 573  aatcgtgcatgtgatgctctatccttgatgattaaaactcaacnnnnnnnnnnagacaat 632
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573  aatcgtgcatgtgatgctctatccttgatgattaaaactcaacnnnnnnnnnnagacaat 632

                                                                        
Query: 633  tccacatggtgtcgtagtgaagtcaatggagttactctatttcatctttacaaatgtcac 692
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633  tccacatggtgtcgtagtgaagtcaatggagttactctatttcatctttacaaatgtcac 692

                                                                        
Query: 693  taaaatattgggtattcataagattgaaagtggtaccaatgatcattcttcaccaaatgg 752
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693  taaaatattgggtattcataagattgaaagtggtaccaatgatcattcttcaccaaatgg 752

                                                                        
Query: 753  tggaatggttggctttcaaactactcgtattttaattagaaagatggatgtaaaaatcaa 812
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753  tggaatggttggctttcaaactactcgtattttaattagaaagatggatgtaaaaatcaa 812

                                                                        
Query: 813  tacggcttgggttaaattttggtcaaagatattggtgaaattctcttccctatgtttaga 872
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813  tacggcttgggttaaattttggtcaaagatattggtgaaattctcttccctatgtttaga 872

                                                                        
Query: 873  tccaaaaccagatattagaaacaacgctatgacattccttcaaaagacaatactctcctc 932
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873  tccaaaaccagatattagaaacaacgctatgacattccttcaaaagacaatactctcctc 932

                                                                        
Query: 933  atcgttacaagagtttttaccaccaggtagatggtttgattgttttgttgatgtggtttt 992
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933  atcgttacaagagtttttaccaccaggtagatggtttgattgttttgttgatgtggtttt 992

                                                                        
Query: 993  ccaactcttagataatcttaaagagaattcaagagaaaccaatttcgaagatacaagatt 1052
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993  ccaactcttagataatcttaaagagaattcaagagaaaccaatttcgaagatacaagatt 1052

                                                                        
Query: 1053 acgtgcttctgctttactctcaaaagtgttcttacaaaatttaaataccatcataaaatg 1112
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 acgtgcttctgctttactctcaaaagtgttcttacaaaatttaaataccatcataaaatg 1112

                                                                        
Query: 1113 tgatcaatttacaaccctatgggatagtattttatctcatttgaaaatttatatgggtct 1172
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 tgatcaatttacaaccctatgggatagtattttatctcatttgaaaatttatatgggtct 1172

                                                                        
Query: 1173 atcggaattactctctgaatctgtaccagagtctcttaaaaatatgcttttggtaatgaa 1232
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 atcggaattactctctgaatctgtaccagagtctcttaaaaatatgcttttggtaatgaa 1232

                                                                        
Query: 1233 taatagtggtgtatttaaaccaccaacaggtgaagaatcagaagatgatatctntaaaca 1292
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1233 taatagtggtgtatttaaaccaccaacaggtgaagaatcagaagatgatatctntaaaca 1292

                                                                        
Query: 1293 actttgggattcaacttgggctgctattgatgaattttgtccaaaaattagtgaagatgt 1352
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1293 actttgggattcaacttgggctgctattgatgaattttgtccaaaaattagtgaagatgt 1352

                                               
Query: 1353 tttatcacgtgttgatccaaattatttcttaaaaa 1387
            |||||||||||||||||||||||||||||||||||
Sbjct: 1353 tttatcacgtgttgatccaaattatttcttaaaaa 1387


 Score =  163 bits (82), Expect = 8e-40
 Identities = 82/82 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1615 gatcaagaagaatttaatccaattatgtcaattccaatggtaccaataatgccaaataat 1674
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1615 gatcaagaagaatttaatccaattatgtcaattccaatggtaccaataatgccaaataat 1674

                                  
Query: 1675 acaaataataatataaacaaat 1696
            ||||||||||||||||||||||
Sbjct: 1675 acaaataataatataaacaaat 1696


 Score = 32.2 bits (16), Expect = 1.9
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 1537 gatactccaagtgttt 1552
            ||||||||||||||||
Sbjct: 1537 gatactccaagtgttt 1552


>Contig-U01854-1 (Contig-U01854-1Q) /CSM_Contig/Contig-U01854-1Q.Seq.d
          Length = 1066

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 1668 aaataatacaaataataatataaa 1691
            ||||||||||||||||||||||||
Sbjct: 851  aaataatacaaataataatataaa 874


 Score = 30.2 bits (15), Expect = 7.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 1677 aaataataatataaa 1691
            |||||||||||||||
Sbjct: 964  aaataataatataaa 978


>Contig-U11781-1 (Contig-U11781-1Q) /CSM_Contig/Contig-U11781-1Q.Seq.d
          Length = 2421

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 1669 aataatacaaataataatataaacaa 1694
            ||||||| ||||||||||||||||||
Sbjct: 264  aataatataaataataatataaacaa 289


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 23,346
Number of Sequences: 6905
Number of extensions: 23346
Number of successful extensions: 2753
Number of sequences better than 10.0: 460
length of query: 1706
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1690
effective length of database: 5,564,391
effective search space: 9403820790
effective search space used: 9403820790
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U11567-1 (Contig-U11567-1Q) /CSM_Contig/Contig-U11567-1Q.Seq.d
         (1706 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ360944) Dictyostelium discoideum cDNA clone:ddc8m18, 5' e...  1025   0.0    1
(AU269405) Dictyostelium discoideum vegetative cDNA clone:VS...   894   0.0    1
(BJ383697) Dictyostelium discoideum cDNA clone:ddc53o22, 3' ...   735   0.0    2
(BJ384349) Dictyostelium discoideum cDNA clone:ddc49k01, 3' ...   722   0.0    2
(CR380954) Candida glabrata strain CBS138 chromosome H compl...    50   0.28   1
(AC151902) Mus musculus BAC clone RP23-240L13 from chromosom...    48   1.1    1
(AC110380) Mus musculus BAC clone RP24-194P24 from 14, compl...    48   1.1    1
(EJ066645) 1095458044454 Global-Ocean-Sampling_GS-26-01-01-1...    48   1.1    1
(DU956965) 224399 Tomato MboI BAC Library Solanum lycopersic...    48   1.1    1
(EY262860) BF01033A1B02.f1 Normalized subtracted keck librar...    48   1.1    1
(CU781715) A BAC library has been constructed from PN40024 g...    40   1.3    2
(AC117134) Rattus norvegicus clone CH230-251E1, *** SEQUENCI...    34   2.1    2
(AC096411) Rattus norvegicus clone CH230-101G22, WORKING DRA...    34   2.2    2
(CR769786) Zebrafish DNA sequence from clone DKEY-256I5 in l...    46   4.4    1
(AY653733) Acanthamoeba polyphaga mimivirus, complete genome.      46   4.4    1
(BV244533) S234P6414RG5.T0 EnglishShepherd Canis familiaris ...    46   4.4    1
(AC123936) Mus musculus BAC clone RP23-408L3 from chromosome...    46   4.4    1
(DQ923117) Nandina domestica chloroplast, complete genome.         46   4.4    1
(AM443979) Vitis vinifera contig VV78X191546.11, whole genom...    46   4.4    1
(AL132898) Caenorhabditis elegans YAC Y59A8B.                      46   4.4    1
(Z98870) Caenorhabditis elegans DNA *** SEQUENCING IN PROGRE...    46   4.4    1
(AC168075) Bos taurus clone CH240-210K22, WORKING DRAFT SEQU...    46   4.4    1
(AZ525922) 249PbF08 Pb MBN #21 Plasmodium berghei genomic 3'...    46   4.4    1
(AZ525855) 248PbH08 Pb MBN #21 Plasmodium berghei genomic 3'...    46   4.4    1
(EI835166) POTGI74TR Solanum tuberosum RHPOTKEY BAC ends Sol...    46   4.4    1
(BZ022065) oee39f05.b1 B.oleracea002 Brassica oleracea genom...    46   4.4    1
(DX493596) Cpl35449 Papaya Genomic DNA BAC Library Carica pa...    40   5.1    2
(CC373748) PUHKB26TD ZM_0.6_1.0_KB Zea mays genomic clone ZM...    34   6.1    3
(EJ432424) 1093015263145 Global-Ocean-Sampling_GS-28-01-01-1...    36   6.3    2
(CN761899) ID0AAA3BC09FM1 ApMS Acyrthosiphon pisum cDNA clon...    42   6.7    2
(ER548511) 1093016201094 Global-Ocean-Sampling_GS-35-01-01-1...    36   6.7    2
(AC099166) Rattus norvegicus clone CH230-53P1, WORKING DRAFT...    32   7.9    2
(AC133249) Rattus norvegicus clone CH230-2I11, WORKING DRAFT...    32   7.9    2
(BX005210) Zebrafish DNA sequence from clone DKEY-222F8 in l...    32   7.9    2
(AC180003) Strongylocentrotus purpuratus clone R3-16P13, WOR...    34   8.0    2
(CU633208) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    32   8.0    2
(AL928936) Zebrafish DNA sequence from clone CH211-133H2 in ...    32   8.0    2
(AC158288) Dasypus novemcinctus clone VMRC5-367G3, WORKING D...    32   8.1    2
(AC184666) Strongylocentrotus purpuratus clone R3-3016G10, W...    34   8.1    2
(AC201341) Strongylocentrotus purpuratus clone R3-16O13, WOR...    34   8.2    2
(AC199313) Dasypus novemcinctus clone VMRC5-328F15, WORKING ...    32   8.2    2
(AC189308) Brassica rapa subsp. pekinensis clone KBrB034A02,...    32   8.3    2
(AC176503) Strongylocentrotus purpuratus clone R3-3072H1, WO...    34   8.6    2

>(BJ360944) Dictyostelium discoideum cDNA clone:ddc8m18, 5' end,
           single read.
          Length = 616

 Score = 1025 bits (517), Expect = 0.0
 Identities = 523/523 (100%)
 Strand = Plus / Plus


Query: 93  aataattatcataatcattatggtaatacatcaaatttttattattcaattaatcaaaaa 152
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93  aataattatcataatcattatggtaatacatcaaatttttattattcaattaatcaaaaa 152


Query: 153 caagaattattttgttttgatttattatcacatattatacttttaaatcaagatagatta 212
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 caagaattattttgttttgatttattatcacatattatacttttaaatcaagatagatta 212


Query: 213 ggattagtatggaataaatattttgaacattgtgaatccattataaatatatttgaacaa 272
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ggattagtatggaataaatattttgaacattgtgaatccattataaatatatttgaacaa 272


Query: 273 gtggttagtgtttcaactgccaatgcaagattaatgacaccattaatcnnaaaagtagta 332
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gtggttagtgtttcaactgccaatgcaagattaatgacaccattaatcnnaaaagtagta 332


Query: 333 atgtcaataatgtatcttttaattagattaattagaaagaaagaggttttcagtactcta 392
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 atgtcaataatgtatcttttaattagattaattagaaagaaagaggttttcagtactcta 392


Query: 393 tcagcttgtatcaaattgttgttacgtgttggtaatgtattggatagtattgcagagaaa 452
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tcagcttgtatcaaattgttgttacgtgttggtaatgtattggatagtattgcagagaaa 452


Query: 453 atgtcaatctctttaattcaattggttcaaaagaatattgatttcctatcaactacacca 512
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 atgtcaatctctttaattcaattggttcaaaagaatattgatttcctatcaactacacca 512


Query: 513 tcagcttgggaacctattttagcattgattgtacttttgtcaggtaatccaaaatcatcg 572
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tcagcttgggaacctattttagcattgattgtacttttgtcaggtaatccaaaatcatcg 572


Query: 573 aatcgtgcatgtgatgctctatccttgatgattaaaactcaac 615
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 aatcgtgcatgtgatgctctatccttgatgattaaaactcaac 615

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,635,978,246
Number of extensions: 101952083
Number of successful extensions: 7868020
Number of sequences better than 10.0: 44
Length of query: 1706
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1682
Effective length of database: 97,308,875,965
Effective search space: 163673529373130
Effective search space used: 163673529373130
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U11567-1 (Contig-U11567-1Q) /CSM_Contig/Contig-U11567-1Q.Seq.d
         (1706 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q9R1D7) RecName: Full=Golgi-specific brefeldin A-resistance gua...   111   7e-23
BC117682_1(BC117682|pid:none) Homo sapiens golgi-specific brefel...   110   1e-22
BC026621_1(BC026621|pid:none) Mus musculus golgi-specific brefel...   110   2e-22
BC014171_1(BC014171|pid:none) Homo sapiens golgi-specific brefel...   109   4e-22
(Q92538) RecName: Full=Golgi-specific brefeldin A-resistance gua...   109   4e-22
BC059883_1(BC059883|pid:none) Mus musculus golgi-specific brefel...   109   4e-22
D87435_1(D87435|pid:none) Human mRNA for KIAA0248 gene, partial ...   109   4e-22
AB383818_1(AB383818|pid:none) Synthetic construct DNA, clone: pF...   109   4e-22
AB009054_21(AB009054|pid:none) Arabidopsis thaliana genomic DNA,...    97   2e-18
BX897674_8(BX897674|pid:none) Neurospora crassa DNA linkage grou...    94   2e-17
AE013599_1511(AE013599|pid:none) Drosophila melanogaster chromos...    89   5e-16
AE013599_1510(AE013599|pid:none) Drosophila melanogaster chromos...    89   6e-16
AM920436_701(AM920436|pid:none) Penicillium chrysogenum Wisconsi...    84   2e-14
AM461845_1(AM461845|pid:none) Vitis vinifera contig VV78X136107....    82   6e-14
AM270400_15(AM270400|pid:none) Aspergillus niger contig An18c007...    82   6e-14
AP008208_1129(AP008208|pid:none) Oryza sativa (japonica cultivar...    77   2e-12
AP004789_16(AP004789|pid:none) Oryza sativa Japonica Group genom...    77   2e-12
AL032627_23(AL032627|pid:none) Caenorhabditis elegans YAC Y41C4A...    77   3e-12
AE017343_501(AE017343|pid:none) Cryptococcus neoformans var. neo...    64   2e-08
AM477397_3(AM477397|pid:none) Vitis vinifera contig VV78X260201....    44   4e-07
CR382133_500(CR382133|pid:none) Debaryomyces hansenii strain CBS...    55   1e-05
AY033329_1(AY033329|pid:none) Debaryomyces hansenii Dgea2p (DGEA...    53   4e-05
CU633895_521(CU633895|pid:none) Podospora anserina genomic DNA c...    51   1e-04
AL606631_11(AL606631|pid:none) Oryza sativa genomic DNA, chromos...    47   0.003
CP000502_112(CP000502|pid:none) Pichia stipitis CBS 6054 chromos...    44   0.018
AF450297_1(AF450297|pid:none) Clavispora lusitaniae Gea2p (GEA2)...    44   0.024
AK162859_1(AK162859|pid:none) Mus musculus adult male hypothalam...    41   0.12
(Q80TL7) RecName: Full=Protein MON2 homolog; AltName: Full=Prote...    41   0.15
AL834320_1(AL834320|pid:none) Homo sapiens mRNA; cDNA DKFZp761D2...    41   0.15
AL833066_1(AL833066|pid:none) Homo sapiens mRNA; cDNA DKFZp451J0...    41   0.15
AB028963_1(AB028963|pid:none) Homo sapiens mRNA for KIAA1040 pro...    41   0.15
BX537415_1(BX537415|pid:none) Homo sapiens mRNA; cDNA DKFZp686F0...    41   0.15
BC144309_1(BC144309|pid:none) Homo sapiens MON2 homolog (S. cere...    41   0.15
AB014059_1(AB014059|pid:none) Mus musculus SF21 mRNA, complete c...    41   0.15
BC150943_1(BC150943|pid:none) Mus musculus MON2 homolog (yeast),...    41   0.15
(Q6GP04) RecName: Full=Protein MON2 homolog;  &BC073345_1(BC0733...    39   0.45
(Q19338) RecName: Full=Protein MON2 homolog;  &T20740(T20740;T23...    39   0.58
AE014134_2487(AE014134|pid:none) Drosophila melanogaster chromos...    37   2.9
AE014134_2486(AE014134|pid:none) Drosophila melanogaster chromos...    37   2.9
AP008209_903(AP008209|pid:none) Oryza sativa (japonica cultivar-...    36   4.9
(P38217) RecName: Full=Importin subunit beta-2; AltName: Full=Ka...    35   6.5

>(Q9R1D7) RecName: Full=Golgi-specific brefeldin A-resistance guanine
            nucleotide exchange factor 1;
            Short=BFA-resistant GEF 1;
            &AF127523_1(AF127523|pid:none)
          Length = 1856

 Score =  111 bits (278), Expect = 7e-23
 Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 5/196 (2%)
 Frame = +1

Query: 790  RKMDVKINTAWVKFWSKILVKFSSLCLDPKPDIRNNAMTFLQKTILSSSLQEFLPPGRWF 969
            RK++    T W   W  +L   + LC D +  +R  A+T+LQ+ +L   LQ+ L    W
Sbjct: 1528 RKIEADSRTLWAHCWCPLLQGIACLCCDARRQVRMQALTYLQRALLVHDLQK-LDALEWE 1586

Query: 970  DCFVDVVFQLLDNLKENSRETN---FEDTRLRASALLSKVFLQNLNTIIKCDQFTTLWDS 1140
             CF  V+F LL  L EN    +    E+TR+RAS LLSKVFLQ+L+ ++    F  LW +
Sbjct: 1587 SCFNKVLFPLLTKLLENISPADVGGMEETRMRASTLLSKVFLQHLSPLLSLSTFAALWLT 1646

Query: 1141 ILSHLKIYM--GXXXXXXXXXXXXXKNMLLVMNNSGVFKPPTGEESEDDIXKQLWDSTWA 1314
            IL  +  YM  G             KNMLLVM+ + +F      ++       LW+ TW
Sbjct: 1647 ILDFMDKYMHAGSSDLLSEAIPESLKNMLLVMDTAEIFH---SADARGGSPSALWEITWE 1703

Query: 1315 AIDEFCPKISEDVLSR 1362
             ID F P + +++  +
Sbjct: 1704 RIDCFLPHLRDELFKQ 1719

 Score = 49.3 bits (116), Expect = 4e-04
 Identities = 29/116 (25%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
 Frame = +3

Query: 144  NQKQELFCFDLLSHIILLNQDRLGLVWNKYFEHCESIINIFEQVVSVSTANARLMTPLIX 323
            +++   FC ++L  I+L N+DR+G VW    +H   +              A+    L+
Sbjct: 1147 DEEDAAFCLEMLLRIVLENRDRVGCVWQTVRDHLYHL-----------CVQAQDFCFLVE 1195

Query: 324  KVVMSIMYLLIRLIRKKEVFSTLSACIK-LLLRVGNVLDSIAEKMSISLIQLVQKN 488
            + V+ ++ L IRL+R++E+   +   ++ LLL   +VL  ++ +++  L +L++ N
Sbjct: 1196 RAVVGLLRLAIRLLRREEISGQVLLSLRILLLMKPSVLSRVSHQVAYGLHELLKTN 1251

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,177,808,628
Number of extensions: 40270406
Number of successful extensions: 90584
Number of sequences better than 10.0: 41
Number of HSP's gapped: 90499
Number of HSP's successfully gapped: 52
Length of query: 568
Length of database: 1,051,180,864
Length adjustment: 134
Effective length of query: 434
Effective length of database: 617,481,958
Effective search space: 267987169772
Effective search space used: 267987169772
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.85  gvh: 0.52  alm: 0.29  top: 0.60  tms: 0.07  mit: 0.51  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.10  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 1.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 48.0 %: nuclear
	 28.0 %: cytoplasmic
	  8.0 %: Golgi
	  8.0 %: mitochondrial
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system

>> prediction for Contig-U11567-1 is nuc