| Contig-U11429-1 |
| Contig ID |
Contig-U11429-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
3532 |
| Chromosome number (1..6, M) |
- |
| Chromosome length |
- |
| Start point |
- |
| End point |
- |
| Strand (PLUS/MINUS) |
- |
| Number of clones |
22 |
| Number of EST |
32 |
| Link to clone list |
U11429 |
| List of clone(s) |
est1=AHK110F,1,615
est2=VHG592F,390,990
est3=VHG417F,645,1093
est4=CHE552F,648,1285
est5=CHF484F,668,1284
est6=CHK727F,668,1139
est7=SFF550F,1009,1574
est8=CHA535F,1260,1847
est9=AFK844F,1296,1873
est10=SSE875F,1630,2209
est11=SHJ571Z,1991,2662
est12=CHE681Z,2030,2526
est13=CHF484Z,2030,2780
est14=SFF550Z,2041,2780
est15=CHL540Z,2109,2564
est16=AHJ816Z,2123,2662
est17=AFK844Z,2125,2813
est18=CHA135Z,2148,2742
est19=CHE552Z,2151,2773
est20=CHH137Z,2152,2581
est21=VHG592Z,2223,2675
est22=SSF330F,2226,2866
est23=SHB863Z,2232,2351
est24=CHK878Z,2234,2677
est25=VHG417Z,2240,2779
est26=CHK727Z,2266,2694
est27=SSG161E,2273,2833
est28=AHG645Z,2349,2647
est29=SSE875Z,2595,2837
est30=SHG391F,2718,2833
est31=SHG391Z,2718,2817
est32=AHK110Z,2867,3524
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.24 |
| Homology vs DNA |
Query= Contig-U11429-1 (Contig-U11429-1Q) /CSM_Contig/Contig-U11429-1Q.Seq.d
(3542 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AF020287) Dictyostelium discoideum CulA (culA) mRNA, comple... 3041 0.0 5
(BJ364394) Dictyostelium discoideum cDNA clone:ddc31g13, 5' ... 1257 0.0 1
(BJ364759) Dictyostelium discoideum cDNA clone:ddc32h22, 5' ... 1223 0.0 1
(BJ362742) Dictyostelium discoideum cDNA clone:ddc23e09, 5' ... 1166 0.0 1
(BJ387135) Dictyostelium discoideum cDNA clone:dds12c13, 5' ... 1122 0.0 1
(BJ327953) Dictyostelium discoideum cDNA clone:dda22h12, 5' ... 1076 0.0 2
(BJ378790) Dictyostelium discoideum cDNA clone:ddc32h22, 3' ... 969 0.0 3
(BJ398456) Dictyostelium discoideum cDNA clone:dds12c13, 3' ... 928 0.0 3
(BJ343204) Dictyostelium discoideum cDNA clone:dda22h12, 3' ... 781 0.0 3
(BJ377021) Dictyostelium discoideum cDNA clone:ddc22e09, 3' ... 735 0.0 2
(BJ378327) Dictyostelium discoideum cDNA clone:ddc31g13, 3' ... 729 0.0 2
(BJ407796) Dictyostelium discoideum cDNA clone:dds43m17, 3' ... 712 0.0 4
(C89702) Dictyostelium discoideum slug cDNA, clone SSG161. 535 0.0 3
(BJ440213) Dictyostelium discoideum cDNA clone:ddv43b06, 3' ... 553 0.0 3
(BJ353450) Dictyostelium discoideum cDNA clone:dda50p04, 3' ... 589 0.0 3
(BJ422094) Dictyostelium discoideum cDNA clone:ddv44g23, 5' ... 942 0.0 1
(BJ367594) Dictyostelium discoideum cDNA clone:ddc43f07, 5' ... 936 0.0 1
(BJ378375) Dictyostelium discoideum cDNA clone:ddc31a22, 3' ... 916 0.0 2
(BJ421534) Dictyostelium discoideum cDNA clone:ddv43b06, 5' ... 890 0.0 1
(BJ440819) Dictyostelium discoideum cDNA clone:ddv44g23, 3' ... 587 0.0 2
(BJ382105) Dictyostelium discoideum cDNA clone:ddc43l20, 3' ... 559 0.0 2
(BJ382650) Dictyostelium discoideum cDNA clone:ddc45o09, 3' ... 793 0.0 2
(BJ379897) Dictyostelium discoideum cDNA clone:ddc36i09, 3' ... 728 0.0 2
(BJ381907) Dictyostelium discoideum cDNA clone:ddc43f07, 3' ... 502 0.0 2
(BJ335627) Dictyostelium discoideum cDNA clone:dda51c03, 5' ... 402 e-138 3
(AU072892) Dictyostelium discoideum slug cDNA, clone SSF330. 476 e-129 1
(AU072565) Dictyostelium discoideum slug cDNA, clone SSE875. 476 e-129 1
(BJ351711) Dictyostelium discoideum cDNA clone:dda44i12, 3' ... 204 e-117 4
(C84724) Dictyostelium discoideum slug cDNA, clone SSE875. 398 e-112 2
(BJ353659) Dictyostelium discoideum cDNA clone:dda51c03, 3' ... 363 3e-95 1
(BJ405886) Dictyostelium discoideum cDNA clone:dds33k08, 3' ... 349 5e-91 1
(BJ375329) Dictyostelium discoideum cDNA clone:ddc18f07, 3' ... 280 3e-90 2
(U82512) Dictyostelium discoideum DrkD (drkD) mRNA, partial ... 343 3e-89 1
(BJ386367) Dictyostelium discoideum cDNA clone:ddc58a06, 3' ... 196 2e-88 2
(BJ440038) Dictyostelium discoideum cDNA clone:ddv42n12, 3' ... 163 6e-76 2
(BJ404189) Dictyostelium discoideum cDNA clone:dds27n16, 3' ... 212 7e-50 1
(BJ394878) Dictyostelium discoideum cDNA clone:dds36f23, 5' ... 167 9e-43 2
(DY890708) CeleSEQ9918 Cunninghamella elegans pBluescript (E... 66 1e-28 6
(AF144717) Dictyostelium discoideum CulB mRNA, complete cds. 64 2e-26 8
(AU039849) Dictyostelium discoideum slug cDNA, clone SLG573. 127 3e-24 1
(BJ406900) Dictyostelium discoideum cDNA clone:dds36f23, 3' ... 92 8e-24 2
(DY890720) CeleSEQ9938 Cunninghamella elegans pBluescript (E... 54 8e-17 6
(DY893714) CeleSEQ13132 Cunninghamella elegans pBluescript (... 58 6e-16 4
(AF136441) Mus musculus cullin 1 (Cul1) mRNA, complete cds. 46 7e-10 4
(AF176910) Mus musculus cullin 1 (Cul1) mRNA, complete cds. 46 7e-10 4
(AK165978) Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-l... 46 8e-10 4
(AK147004) Mus musculus 17 days embryo kidney cDNA, RIKEN fu... 46 9e-10 4
(BC029260) Mus musculus cullin 1, mRNA (cDNA clone MGC:35976... 46 9e-10 4
(FC575784) CAXP1192.fwd CAXP Lottia gigantea from head, foot... 44 3e-08 3
(EC132070) HVE00003876 Hartmannella vermiformis Normalized l... 50 5e-08 2
(DY889059) CeleSEQ6560 Cunninghamella elegans pBluescript (E... 54 6e-08 4
(BI511568) BB160006A20B06.5 Bee Brain Normalized Library, BB... 66 1e-07 2
(AF083216) Mus musculus SCF complex protein cul-1 mRNA, comp... 46 2e-07 4
(BC161932) Rattus norvegicus cullin 1, mRNA (cDNA clone MGC:... 46 5e-07 4
(EC361772) IMMUNEF089644O15 POSSUM_01-C-POSSUM-IMMUNE-2KB Tr... 44 7e-07 2
(DY603735) LIVERF031286J23 POSSUM_01-POSSUM-LIVER-2KB Tricho... 44 7e-07 2
(EC757038) PPE00006779 Agencourt Biosciences Agen-0020 Non-n... 68 2e-06 1
(AC154015) Mus musculus 6 BAC RP24-194J12 (Roswell Park Canc... 44 2e-05 7
(CF072609) FE1_3_G04.g1_A002 Iron-deficient seedlings Sorghu... 46 4e-05 2
(FC715162) CAXY954.fwd CAXY Lottia gigantea from male gonad ... 48 5e-05 2
(CX940801) JGI_CAAO7327.fwd NIH_XGC_tropTe5 Xenopus (Siluran... 48 1e-04 3
(BQ945325) AGENCOURT_10022936 NCI_CGAP_Mam2 Mus musculus cDN... 42 1e-04 3
(BC150023) Bos taurus cullin 2, mRNA (cDNA clone MGC:165892 ... 62 2e-04 1
(BC123787) Bos taurus cullin 2, mRNA (cDNA clone MGC:143284 ... 62 2e-04 1
(BC103348) Bos taurus cDNA clone IMAGE:7950261, containing f... 62 2e-04 1
(EE357185) LB02958.CR_F19 GC_BGC-29 Bos taurus cDNA clone IM... 62 2e-04 1
(DV817172) LB01721.CR_P22 GC_BGC-17 Bos taurus cDNA clone IM... 62 2e-04 1
(AI438336) SWOvAFCAP31E12SK Onchocerca volvulus adult female... 62 2e-04 1
(FF621857) G825P5245RD8.T0 Acorn worm normalized gastrula pE... 62 2e-04 1
(DY889854) CeleSEQ6816 Cunninghamella elegans pBluescript (E... 54 2e-04 2
(FG088881) CMRC-FF-IH0-acm-g-01-0-CMRC.r1 Ceratitis capitata... 40 2e-04 4
(DJ001102) Prediction method of carcinogenicity of chemicals. 46 0.001 2
(DD492826) Prediction method of carcinogenicity of chemicals. 46 0.001 2
(AA138163) mq77e08.r1 Stratagene mouse melanoma (#937312) Mu... 46 0.001 2
(AI882562) ub97f10.r1 Soares_mammary_gland_NbMMG Mus musculu... 46 0.001 2
(AU015991) Mus musculus 2-cell embryo cDNA 3'-end sequence, ... 46 0.001 2
(BE847198) uw23g08.y1 Soares_thymus_2NbMT Mus musculus cDNA ... 46 0.001 2
(BY384235) Mus musculus cDNA, RIKEN full-length enriched lib... 46 0.001 2
(AI019903) ua93h10.r1 Soares_mammary_gland_NbMMG Mus musculu... 46 0.001 2
(DV645692) DS007C_H04 Eppig Hampl Solter fully-grown mouse o... 46 0.002 2
(AA549535) vk80a06.s1 Knowles Solter mouse 2 cell Mus muscul... 46 0.002 2
(BG070440) H3087D05-3 NIA Mouse 15K cDNA Clone Set Mus muscu... 46 0.002 2
(BG800850) 0053-85 Mouse E14.5 retina lambda ZAP II Library ... 46 0.002 2
(BQ085703) ii09a01.y1 Melton Amplified Mouse E16 5 Pancreas ... 46 0.002 2
(CF356606) maj60f05.y1 McCarrey Eddy 6 day primitive type A ... 46 0.002 2
(DT916151) S25-21349 Hematopoietic stem cells Mus musculus c... 46 0.002 2
(CB585019) AMGNNUC:NRHY4-00185-F5-A W Rat hypothalamus (1046... 46 0.002 2
(ES640215) NVPEF05TR NVPA Nasonia vitripennis cDNA, mRNA seq... 50 0.002 2
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 40 0.002 17
(BF134999) 601779920F1 NCI_CGAP_Lu30 Mus musculus cDNA clone... 46 0.002 2
(BM119197) L0922B12-3 NIA Mouse Newborn Kidney cDNA Library ... 46 0.002 2
(BQ199425) UI-R-EB0-clc-e-22-0-UI.s1 UI-R-EB0 Rattus norvegi... 46 0.002 2
(CB326713) UI-R-DZ0-crq-f-02-0-UI.s1 NCI_CGAP_DZ0 Rattus nor... 46 0.002 2
(BI283034) UI-R-DB0-byr-c-02-0-UI.s1 UI-R-DB0 Rattus norvegi... 46 0.002 2
(AW681996) EST00810 E8.5 mouse craniofacial subtraction cDNA... 46 0.002 2
(BG794019) UTSW_SM18F4 UTSW Adult Mouse Skeletal Muscle Libr... 46 0.002 2
(BI284428) UI-R-CX0s-ccr-a-04-0-UI.s1 UI-R-CX0s Rattus norve... 46 0.002 2
(BU961554) AGENCOURT_10613899 NIH_MGC_169 Mus musculus cDNA ... 46 0.002 2
(BG095050) uu83c06.x1 Soares_mouse_NMGB_bcell Mus musculus c... 46 0.002 2
(DV648885) DS045A_D04 Eppig Hampl Solter fully-grown mouse o... 46 0.002 2
>(AF020287) Dictyostelium discoideum CulA (culA) mRNA, complete cds.
Length = 2716
Score = 3041 bits (1534), Expect(5) = 0.0
Identities = 1536/1537 (99%)
Strand = Plus / Plus
Query: 510 aatgtcaatgatgacaagtacaccaaccaanagaagtgttaaacttgatgatatatggcc 569
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 300 aatgtcaatgatgacaagtacaccaaccaagagaagtgttaaacttgatgatatatggcc 359
Query: 570 tgaattagaggaaggaatttataagattataacagatttaaataaaggttttccaaaaca 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tgaattagaggaaggaatttataagattataacagatttaaataaaggttttccaaaaca 419
Query: 630 aaaatggatagcattatatacacatgtttatgattattgtgcagcatctcaatcaaaatc 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aaaatggatagcattatatacacatgtttatgattattgtgcagcatctcaatcaaaatc 479
Query: 690 aagtgcaaaagttggaatgccaaaacaacaagcatctggtgcaaattatgttggtgaaga 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aagtgcaaaagttggaatgccaaaacaacaagcatctggtgcaaattatgttggtgaaga 539
Query: 750 tttatataaccgattaaatttatttttaaaaaagcatatgtcacaattattaaaactcac 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tttatataaccgattaaatttatttttaaaaaagcatatgtcacaattattaaaactcac 599
Query: 810 agaaacaaagatggatgaaccattattaaattattactatacagaatgggatcgttatac 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 agaaacaaagatggatgaaccattattaaattattactatacagaatgggatcgttatac 659
Query: 870 atctgcaatgaaatatattaataacatttttcaatatatgaatagatattggattaaaag 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 atctgcaatgaaatatattaataacatttttcaatatatgaatagatattggattaaaag 719
Query: 930 agaaattgatgatggtaaaaaagaagtttatgaaatatttattttatcattagtaatttg 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 agaaattgatgatggtaaaaaagaagtttatgaaatatttattttatcattagtaatttg 779
Query: 990 gagagattgtttatttacaccattaaaacaacgtttaacaaattcattattggatataat 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 gagagattgtttatttacaccattaaaacaacgtttaacaaattcattattggatataat 839
Query: 1050 tgaaagtgaaagaaatggttatcaaattaatacacatttaattaaaggtgttataaatgg 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tgaaagtgaaagaaatggttatcaaattaatacacatttaattaaaggtgttataaatgg 899
Query: 1110 ttatgttagtttaggattaaatagagagaaaccaaaggaaacaattttacaagtatataa 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 ttatgttagtttaggattaaatagagagaaaccaaaggaaacaattttacaagtatataa 959
Query: 1170 atctggttttgaagaattatttttaacagcaactgaaaattattatacaaatgaatctgc 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 atctggttttgaagaattatttttaacagcaactgaaaattattatacaaatgaatctgc 1019
Query: 1230 taaattcatctctgaaaatagtgtagctgattatatgaaaaaagttgaaactagattaaa 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 taaattcatctctgaaaatagtgtagctgattatatgaaaaaagttgaaactagattaaa 1079
Query: 1290 tgaagaagttaaaagagttcaacaatatttacatcaaaatacagaatctgaattaattgc 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 tgaagaagttaaaagagttcaacaatatttacatcaaaatacagaatctgaattaattgc 1139
Query: 1350 aaaatgtgaaaaagtattaattgaaaaacatgttgaagtaatttggaatgaatttcaaac 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 aaaatgtgaaaaagtattaattgaaaaacatgttgaagtaatttggaatgaatttcaaac 1199
Query: 1410 attattagaaaaagataaaattccagatttaacacgtatgtattcattattatcaagaat 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 attattagaaaaagataaaattccagatttaacacgtatgtattcattattatcaagaat 1259
Query: 1470 accaagaggtttagaaccattaagaactacattagaaaaacatgttcaaaatgttggttt 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 accaagaggtttagaaccattaagaactacattagaaaaacatgttcaaaatgttggttt 1319
Query: 1530 acaagcagtttcatcaattgcaactaatggtgtaattgaaccaaaagtttatattgaaac 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1320 acaagcagtttcatcaattgcaactaatggtgtaattgaaccaaaagtttatattgaaac 1379
Query: 1590 attattaaaagtatttaaaaaatataatgaattagtgactggagcatttagaagtgatac 1649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1380 attattaaaagtatttaaaaaatataatgaattagtgactggagcatttagaagtgatac 1439
Query: 1650 aggatttgtagcatcattagataaagcatgtagaagatttataaatgagaatgcagttac 1709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1440 aggatttgtagcatcattagataaagcatgtagaagatttataaatgagaatgcagttac 1499
Query: 1710 aatagcagcaaaatcatcatcaaagtcaccagagttattggcacgttttacagatttctt 1769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1500 aatagcagcaaaatcatcatcaaagtcaccagagttattggcacgttttacagatttctt 1559
Query: 1770 attaaagaaatcaccaaataatccagaggagtcagagatggaacaattgttgaatgatgt 1829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1560 attaaagaaatcaccaaataatccagaggagtcagagatggaacaattgttgaatgatgt 1619
Query: 1830 aatgattgtatttaaatatatagaggataaagatgtttttcaagatttctattcaaagat 1889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1620 aatgattgtatttaaatatatagaggataaagatgtttttcaagatttctattcaaagat 1679
Query: 1890 gttggcaaaacgtttaattcatggtactagtaccagtgaagatttagagggtacaatgat 1949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1680 gttggcaaaacgtttaattcatggtactagtaccagtgaagatttagagggtacaatgat 1739
Query: 1950 tggaaagttaaaatcaacttgtggttatgagtacacttcaaagcttcaaagaatgtttac 2009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1740 tggaaagttaaaatcaacttgtggttatgagtacacttcaaagcttcaaagaatgtttac 1799
Query: 2010 agatatgtcattgtcaagagagttattggatcgtttc 2046
|||||||||||||||||||||||||||||||||||||
Sbjct: 1800 agatatgtcattgtcaagagagttattggatcgtttc 1836
Score = 936 bits (472), Expect(5) = 0.0
Identities = 472/472 (100%)
Strand = Plus / Plus
Query: 2047 caataatcatattgaacaagtggagagatcatcattgaatattgatttcagtgtattggt 2106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1836 caataatcatattgaacaagtggagagatcatcattgaatattgatttcagtgtattggt 1895
Query: 2107 gctagcaaccggctcatggccattgcaaccaccgtccaccaatttctcaataccaaagga 2166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1896 gctagcaaccggctcatggccattgcaaccaccgtccaccaatttctcaataccaaagga 1955
Query: 2167 gcttcaagcctgtgagcaattgtttcaaaagttttaccaaaatcaacattctggtcgtaa 2226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1956 gcttcaagcctgtgagcaattgtttcaaaagttttaccaaaatcaacattctggtcgtaa 2015
Query: 2227 attgaattggttacatcatttatcaaagggtgaattgaaaactaaatatttacaaactag 2286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2016 attgaattggttacatcatttatcaaagggtgaattgaaaactaaatatttacaaactag 2075
Query: 2287 taagagtggttatactttacaatgttcaacctatcaaattggtgtactcttacaattcaa 2346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2076 taagagtggttatactttacaatgttcaacctatcaaattggtgtactcttacaattcaa 2135
Query: 2347 tcaatatgaaactctcacctctgaagagattcaagagagcacccaattgattgattccgt 2406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2136 tcaatatgaaactctcacctctgaagagattcaagagagcacccaattgattgattccgt 2195
Query: 2407 tcttaagggtactttaacctctttggcaaaatcaaagattctcttggctgatccacctct 2466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2196 tcttaagggtactttaacctctttggcaaaatcaaagattctcttggctgatccacctct 2255
Query: 2467 cgatgatgaagagatcgctaaaaccacaaaattctctttgaataaacaattt 2518
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2256 cgatgatgaagagatcgctaaaaccacaaaattctctttgaataaacaattt 2307
Score = 535 bits (270), Expect(5) = 0.0
Identities = 270/270 (100%)
Strand = Plus / Plus
Query: 2532 caaagattttcatcaatgttccagtgttaactcaagtcaaagaagaaattgattcaatcc 2591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2321 caaagattttcatcaatgttccagtgttaactcaagtcaaagaagaaattgattcaatcc 2380
Query: 2592 ataaaactgtcgaagaggatagaaaacttcaaattcaagctgccatcgttagaatcatga 2651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2381 ataaaactgtcgaagaggatagaaaacttcaaattcaagctgccatcgttagaatcatga 2440
Query: 2652 aaatgagaaaacaattggctcattctggtttaatgactgaagtaatctctcaacttcaaa 2711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2441 aaatgagaaaacaattggctcattctggtttaatgactgaagtaatctctcaacttcaaa 2500
Query: 2712 ctcgtttcaatccaaaagttaatatcattaaaaaatgtattgatattttaattgaaaaag 2771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2501 ctcgtttcaatccaaaagttaatatcattaaaaaatgtattgatattttaattgaaaaag 2560
Query: 2772 aatatttaatgagagttgaaggtaaaaaag 2801
||||||||||||||||||||||||||||||
Sbjct: 2561 aatatttaatgagagttgaaggtaaaaaag 2590
Score = 42.1 bits (21), Expect(5) = 0.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2803 atcattattcttatgttgctt 2823
|||||||||||||||||||||
Sbjct: 2591 atcattattcttatgttgctt 2611
Score = 36.2 bits (18), Expect(5) = 0.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 2848 ttaaattaataataataa 2865
||||||||||||||||||
Sbjct: 2635 ttaaattaataataataa 2652
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 3,823,043,821
Number of extensions: 253651345
Number of successful extensions: 22140200
Number of sequences better than 10.0: 554
Length of query: 3542
Length of database: 95,242,211,685
Length adjustment: 25
Effective length of query: 3517
Effective length of database: 97,216,030,006
Effective search space: 341908777531102
Effective search space used: 341908777531102
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)
|
| protein update |
2009. 6.30 |
| Homology vs Protein |
Query= Contig-U11429-1 (Contig-U11429-1Q) /CSM_Contig/Contig-U11429-1Q.Seq.d
(3542 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(O60999) RecName: Full=Cullin-1; Short=CUL-1; AltName: ... 996 0.0
(Q24311) RecName: Full=Cullin homolog 1; AltName: Full=Lin-19 ho... 455 0.0
AM270168_143(AM270168|pid:none) Aspergillus niger contig An08c01... 442 0.0
FB802423_1(FB802423|pid:none) Sequence 21696 from Patent WO20080... 449 0.0
FB802419_1(FB802419|pid:none) Sequence 21692 from Patent WO20080... 431 e-177
CU633897_277(CU633897|pid:none) Podospora anserina genomic DNA c... 436 e-175
AL713629_14(AL713629|pid:none) Aspergillus fumigatus BAC AFA5C11... 421 e-173
AE017356_115(AE017356|pid:none) Cryptococcus neoformans var. neo... 434 e-169
AB016896_1(AB016896|pid:none) Schizosaccharomyces pombe pcu1+ ge... 373 e-158
(Q17389) RecName: Full=Cullin-1; Short=CUL-1; AltName: ... 392 e-153
T20365(T20365)hypothetical protein D2045.6 - Caenorhabditis eleg... 392 e-153
CR382130_516(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 373 e-151
(Q13616) RecName: Full=Cullin-1; Short=CUL-1; &(Q5R4G6... 539 e-151
BC004836_1(BC004836|pid:none) Mus musculus cullin 1, mRNA (cDNA ... 539 e-151
AK164274_1(AK164274|pid:none) Mus musculus 9 days embryo whole b... 539 e-151
AF136441_1(AF136441|pid:none) Mus musculus cullin 1 (Cul1) mRNA,... 538 e-151
BC097675_1(BC097675|pid:none) Xenopus laevis hypothetical protei... 538 e-151
DQ466084_1(DQ466084|pid:none) Xenopus tropicalis cullin-1 mRNA, ... 538 e-151
BC093534_1(BC093534|pid:none) Xenopus laevis hypothetical protei... 538 e-151
BC066480_1(BC066480|pid:none) Danio rerio cullin 1a, mRNA (cDNA ... 533 e-149
BC045445_1(BC045445|pid:none) Danio rerio cullin 1a, mRNA (cDNA ... 532 e-149
U58087_1(U58087|pid:none) Human Hs-cul-1 mRNA, complete cds. 526 e-147
AK096163_1(AK096163|pid:none) Homo sapiens cDNA FLJ38844 fis, cl... 522 e-146
(Q9XZJ3) RecName: Full=Cullin-2; Short=CUL-2; AltName: ... 338 e-141
FN392319_628(FN392319|pid:none) Pichia pastoris GS115 chromosome... 334 e-139
AK220287_1(AK220287|pid:none) Mus musculus mRNA for mKIAA4106 pr... 291 e-131
BC059348_1(BC059348|pid:none) Xenopus laevis hypothetical protei... 285 e-131
U83410_1(U83410|pid:none) Human CUL-2 (cul-2) mRNA, complete cds. 288 e-130
CR382136_670(CR382136|pid:none) Debaryomyces hansenii strain CBS... 346 e-127
AL392046_3(AL392046|pid:none) Human DNA sequence from clone RP11... 272 e-125
U58088_1(U58088|pid:none) Human Hs-cul-2 mRNA, partial cds. 265 e-123
FB802421_1(FB802421|pid:none) Sequence 21694 from Patent WO20080... 354 e-121
FM992690_154(FM992690|pid:none) Candida dubliniensis CD36 chromo... 351 e-118
AK016520_1(AK016520|pid:none) Mus musculus adult male testis cDN... 291 e-113
AL392046_1(AL392046|pid:none) Human DNA sequence from clone RP11... 290 e-113
AE014134_3634(AE014134|pid:none) Drosophila melanogaster chromos... 262 e-112
CR380956_393(CR380956|pid:none) Candida glabrata strain CBS138 c... 288 e-110
Z92822_4(Z92822|pid:none) Caenorhabditis elegans Cosmid ZK520, c... 278 e-110
CU928175_388(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 285 e-109
(Q54NZ5) RecName: Full=Cullin-3; Short=CUL-3; AltName: ... 262 e-105
BC025902_1(BC025902|pid:none) Mus musculus cullin 2, mRNA (cDNA ... 204 e-103
Z92822_7(Z92822|pid:none) Caenorhabditis elegans Cosmid ZK520, c... 278 e-103
U58084_1(U58084|pid:none) Caenorhabditis elegans cul-2 mRNA, com... 275 e-101
AM478489_5(AM478489|pid:none) Vitis vinifera contig VV78X092018.... 241 3e-99
FB802477_1(FB802477|pid:none) Sequence 21750 from Patent WO20080... 233 1e-97
A86395(A86395) hypothetical protein T2P11.2 [imported] - Arabido... 245 2e-97
AL606454_2(AL606454|pid:none) Oryza sativa genomic DNA, chromoso... 234 7e-97
AK072402_1(AK072402|pid:none) Oryza sativa Japonica Group cDNA c... 233 9e-97
AK230392_1(AK230392|pid:none) Arabidopsis thaliana mRNA for cull... 243 1e-96
AC013289_13(AC013289|pid:none) Arabidopsis thaliana chromosome 1... 235 6e-96
FB802359_1(FB802359|pid:none) Sequence 21632 from Patent WO20080... 230 1e-95
AC146568_18(AC146568|pid:none) Medicago truncatula clone mth2-10... 231 1e-94
DQ250017_1(DQ250017|pid:none) Petunia integrifolia subsp. inflat... 239 1e-94
AM484063_2(AM484063|pid:none) Vitis vinifera contig VV78X066416.... 224 1e-93
(Q94AH6) RecName: Full=Cullin-1; &AJ318017_1(AJ318017|pid:none)... 238 4e-93
EF678052_1(EF678052|pid:none) Picea sitchensis clone WS02821_G23... 235 6e-93
BC135616_1(BC135616|pid:none) Xenopus tropicalis cullin 3, mRNA ... 225 2e-92
BC168969_1(BC168969|pid:none) Rattus norvegicus cullin 3, mRNA (... 225 4e-92
AP003281_23(AP003281|pid:none) Oryza sativa Japonica Group genom... 241 4e-92
BC077239_1(BC077239|pid:none) Xenopus laevis cullin 3, mRNA (cDN... 225 5e-92
AB014517_1(AB014517|pid:none) Homo sapiens mRNA for KIAA0617 pro... 224 6e-92
(Q13618) RecName: Full=Cullin-3; Short=CUL-3; &AB38392... 224 6e-92
AY423034_1(AY423034|pid:none) Danio rerio cullin 3 (CUL3) mRNA, ... 221 6e-92
AC073052_1(AC073052|pid:none) Homo sapiens BAC clone RP11-92F20 ... 224 6e-92
AB179010_1(AB179010|pid:none) Macaca fascicularis testis cDNA cl... 224 6e-92
AK129174_1(AK129174|pid:none) Mus musculus premature mRNA for mK... 224 8e-92
(Q9JLV5) RecName: Full=Cullin-3; Short=CUL-3; &AF12973... 224 8e-92
CP001325_68(CP001325|pid:none) Micromonas sp. RCC299 chromosome ... 231 1e-91
AY337761_1(AY337761|pid:none) Homo sapiens cullin 3 isoform (CUL... 221 7e-91
FB802471_1(FB802471|pid:none) Sequence 21744 from Patent WO20080... 232 1e-90
AJ344533_1(AJ344533|pid:none) Nicotiana tabacum mRNA for cullin ... 228 1e-90
AK064940_1(AK064940|pid:none) Oryza sativa Japonica Group cDNA c... 235 2e-90
AJ344534_1(AJ344534|pid:none) Nicotiana tabacum mRNA for cullin ... 230 1e-89
AJ344541_1(AJ344541|pid:none) Arabidopsis thaliana partial mRNA ... 213 2e-89
FB802475_1(FB802475|pid:none) Sequence 21748 from Patent WO20080... 231 3e-89
FN357359_3(FN357359|pid:none) Schistosoma mansoni genome sequenc... 216 5e-89
AC011806_16(AC011806|pid:none) Genomic Sequence For Oryza sativa... 229 2e-88
BT082116_1(BT082116|pid:none) Drosophila melanogaster MIP05150 f... 218 2e-88
AE014134_2672(AE014134|pid:none) Drosophila melanogaster chromos... 218 2e-88
AB080190_1(AB080190|pid:none) Pisum sativum cul1 mRNA for cullin... 224 1e-87
(Q9JJ31) RecName: Full=Cullin-5; Short=CUL-5; AltName: ... 228 4e-86
AF062537_1(AF062537|pid:none) Homo sapiens cullin 3 mRNA, comple... 204 5e-86
AF212995_1(AF212995|pid:none) Homo sapiens cullin CUL4B (CUL4B) ... 201 6e-86
(Q93034) RecName: Full=Cullin-5; Short=CUL-5; AltName: ... 228 6e-86
AL513356_5(AL513356|pid:none) Mouse DNA sequence from clone RP23... 201 1e-85
AK160998_1(AK160998|pid:none) Mus musculus 15 days embryo head c... 201 1e-85
AK012410_1(AK012410|pid:none) Mus musculus 11 days embryo whole ... 201 1e-85
X81882_1(X81882|pid:none) H.sapiens mRNA for for vasopressin act... 227 1e-85
AF017061_1(AF017061|pid:none) Homo sapiens vasopressin-activated... 227 1e-85
BX537787_1(BX537787|pid:none) Homo sapiens mRNA; cDNA DKFZp779P1... 200 2e-85
(Q13620) RecName: Full=Cullin-4B; Short=CUL-4B; 200 2e-85
AY365125_1(AY365125|pid:none) Homo sapiens cullin 4B (CUL4B) mRN... 200 3e-85
AC105772_11(AC105772|pid:none) Oryza sativa (japonica cultivar-g... 216 3e-85
AK123688_1(AK123688|pid:none) Homo sapiens cDNA FLJ41694 fis, cl... 199 4e-85
AE013599_593(AE013599|pid:none) Drosophila melanogaster chromoso... 203 1e-84
AK031955_1(AK031955|pid:none) Mus musculus adult male medulla ob... 229 2e-84
(Q29425) RecName: Full=Cullin-5; Short=CUL-5; AltName: ... 228 3e-84
BC166184_1(BC166184|pid:none) Xenopus tropicalis cullin 4B, mRNA... 197 4e-84
BC166799_1(BC166799|pid:none) Rattus norvegicus similar to culli... 197 8e-84
AK168215_1(AK168215|pid:none) Mus musculus TIB-55 BB88 cDNA, RIK... 197 1e-83
AC084296_4(AC084296|pid:none) Oryza sativa chromosome 3 BAC OSJN... 198 1e-83
AC002476_3(AC002476|pid:none) Human PAC clone RP1-318C15 from Xq... 194 1e-83
BC100244_1(BC100244|pid:none) Xenopus laevis hypothetical protei... 195 3e-83
EU218537_1(EU218537|pid:none) Solanum lycopersicum cullin 4 (CUL... 198 6e-83
(Q13619) RecName: Full=Cullin-4A; Short=CUL-4A; &AL136... 195 1e-82
AY892461_1(AY892461|pid:none) Synthetic construct Homo sapiens c... 194 2e-82
CR761985_1(CR761985|pid:none) Xenopus tropicalis finished cDNA, ... 194 4e-82
BC123909_1(BC123909|pid:none) Xenopus tropicalis cullin 4A, mRNA... 194 4e-82
AK314835_1(AK314835|pid:none) Homo sapiens cDNA, FLJ95721, highl... 194 7e-82
CR860407_1(CR860407|pid:none) Pongo abelii mRNA; cDNA DKFZp459H0... 308 7e-82
AC011806_19(AC011806|pid:none) Genomic Sequence For Oryza sativa... 203 3e-81
U58089_1(U58089|pid:none) Human Hs-cul-3 mRNA, partial cds. 188 4e-81
(Q17391) RecName: Full=Cullin-3; Short=CUL-3; &AC02474... 192 4e-80
AM432295_1(AM432295|pid:none) Vitis vinifera contig VV78X168341.... 194 8e-80
AC009525_2(AC009525|pid:none) Arabidopsis thaliana chromosome I ... 189 1e-79
(Q54CS2) RecName: Full=Cullin-4; Short=CUL-4; AltName: ... 194 2e-79
BC024113_1(BC024113|pid:none) Mus musculus cullin 4A, mRNA (cDNA... 182 4e-79
AY084267_1(AY084267|pid:none) Arabidopsis thaliana clone 101723 ... 183 9e-79
AY091113_1(AY091113|pid:none) Arabidopsis thaliana putative cull... 183 9e-79
AK299644_1(AK299644|pid:none) Homo sapiens cDNA FLJ53180 complet... 177 1e-77
CP001329_598(CP001329|pid:none) Micromonas sp. RCC299 chromosome... 194 1e-77
BC167417_1(BC167417|pid:none) Xenopus tropicalis cDNA clone IMAG... 166 8e-75
BC095589_1(BC095589|pid:none) Danio rerio cullin 1b, mRNA (cDNA ... 283 3e-74
AB025620_3(AB025620|pid:none) Arabidopsis thaliana genomic DNA, ... 180 4e-74
AE014297_4483(AE014297|pid:none) Drosophila melanogaster chromos... 190 3e-73
BT069454_1(BT069454|pid:none) Zea mays full-length cDNA clone ZM... 151 3e-73
CR382126_238(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 278 8e-73
FN316912_1(FN316912|pid:none) Schistosoma japonicum isolate Anhu... 176 3e-72
AB012193_1(AB012193|pid:none) Homo sapiens mRNA for cullin-4A, p... 160 3e-72
FN357616_27(FN357616|pid:none) Schistosoma mansoni genome sequen... 174 3e-71
FN357616_28(FN357616|pid:none) Schistosoma mansoni genome sequen... 169 9e-70
FB802427_1(FB802427|pid:none) Sequence 21700 from Patent WO20080... 181 3e-69
(Q09760) RecName: Full=Cullin-3; Short=Cul-3; &CU32967... 161 1e-68
AM920437_994(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 143 3e-68
FB802385_1(FB802385|pid:none) Sequence 21658 from Patent WO20080... 146 4e-68
BC165630_1(BC165630|pid:none) Danio rerio cullin 4A, mRNA (cDNA ... 204 1e-67
BC054607_1(BC054607|pid:none) Danio rerio cullin 4A, mRNA (cDNA ... 204 1e-67
AP007155_94(AP007155|pid:none) Aspergillus oryzae RIB40 genomic ... 144 4e-67
FB802393_1(FB802393|pid:none) Sequence 21666 from Patent WO20080... 142 9e-67
T27884(T27884)hypothetical protein ZK520.4 - Caenorhabditis eleg... 255 7e-66
C88618(C88618)protein ZK520.4 [imported] - Caenorhabditis elegans 255 7e-66
S62405(S62405)hypothetical protein SPAC24H6.03 - fission yeast ... 152 7e-66
FB802391_1(FB802391|pid:none) Sequence 21664 from Patent WO20080... 146 5e-65
BX842631_2(BX842631|pid:none) Neurospora crassa DNA linkage grou... 142 2e-64
FN357359_1(FN357359|pid:none) Schistosoma mansoni genome sequenc... 216 5e-64
FN318267_1(FN318267|pid:none) Schistosoma japonicum isolate Anhu... 218 4e-63
FN392320_390(FN392320|pid:none) Pichia pastoris GS115 chromosome... 152 1e-62
FN357586_5(FN357586|pid:none) Schistosoma mansoni genome sequenc... 161 3e-61
CU633438_499(CU633438|pid:none) Podospora anserina genomic DNA c... 129 2e-59
FB802383_1(FB802383|pid:none) Sequence 21656 from Patent WO20080... 130 6e-59
CU633900_405(CU633900|pid:none) Podospora anserina genomic DNA c... 133 5e-58
AK296700_1(AK296700|pid:none) Homo sapiens cDNA FLJ58013 complet... 138 9e-58
CP001323_208(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 226 3e-57
BC154320_1(BC154320|pid:none) Danio rerio cullin 5, mRNA (cDNA c... 221 4e-56
U58090_1(U58090|pid:none) Human Hs-cul-4A mRNA, partial cds. 138 5e-56
U58086_1(U58086|pid:none) Caenorhabditis elegans cul-4 mRNA, com... 122 1e-55
(O14122) RecName: Full=Cullin-4; Short=Cul-4; &AB01702... 123 2e-55
BC057475_1(BC057475|pid:none) Danio rerio cullin 5, mRNA (cDNA c... 221 2e-55
AJ344535_1(AJ344535|pid:none) Nicotiana tabacum partial mRNA for... 128 2e-52
T16367(T16367)hypothetical protein F45E12.3 - Caenorhabditis ele... 122 6e-52
BC031844_1(BC031844|pid:none) Homo sapiens cullin 3, mRNA (cDNA ... 137 7e-51
AJ319540_1(AJ319540|pid:none) Arabidopsis thaliana partial mRNA ... 137 3e-50
FB802425_1(FB802425|pid:none) Sequence 21698 from Patent WO20080... 169 2e-49
CR382135_496(CR382135|pid:none) Debaryomyces hansenii strain CBS... 120 3e-46
T28043(T28043)hypothetical protein ZK856.1 - Caenorhabditis eleg... 182 1e-43
AE017347_438(AE017347|pid:none) Cryptococcus neoformans var. neo... 115 2e-40
EU586194_1(EU586194|pid:none) Malus x domestica cultivar Fuji cu... 124 8e-39
CR382123_789(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 99 2e-38
U58091_1(U58091|pid:none) Human Hs-cul-4B mRNA, partial cds. 142 3e-38
BC010347_1(BC010347|pid:none) Mus musculus cullin 4B, mRNA (cDNA... 142 1e-37
AY528252_1(AY528252|pid:none) Bos taurus cullin 1 mRNA, partial ... 154 3e-35
AE014296_2364(AE014296|pid:none) Drosophila melanogaster chromos... 102 4e-35
AE016819_731(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 105 4e-33
AK038873_1(AK038873|pid:none) Mus musculus adult male hypothalam... 115 2e-31
AK117909_1(AK117909|pid:none) Arabidopsis thaliana At1g02980 mRN... 134 2e-29
CR382127_77(CR382127|pid:none) Yarrowia lipolytica strain CLIB12... 87 2e-25
U82512_1(U82512|pid:none) Dictyostelium discoideum DrkD (drkD) m... 111 2e-22
AY809813_1(AY809813|pid:none) Schistosoma japonicum SJCHGC03444 ... 111 2e-22
CU928169_354(CU928169|pid:none) Kluyveromyces thermotolerans str... 105 2e-20
FM992695_41(FM992695|pid:none) Candida dubliniensis CD36 chromos... 103 4e-20
AK003679_1(AK003679|pid:none) Mus musculus 18-day embryo whole b... 100 3e-19
AY724780_1(AY724780|pid:none) Camellia sinensis cullin mRNA, par... 100 3e-19
AF508033_1(AF508033|pid:none) Equus caballus cullin 4A (CUL4A) m... 100 4e-19
AM494961_237(AM494961|pid:none) Leishmania braziliensis chromoso... 99 8e-19
(P53202) RecName: Full=Cullin-3; AltName: Full=Cullin-B; &AY387... 98 2e-18
FN357424_5(FN357424|pid:none) Schistosoma mansoni genome sequenc... 98 2e-18
AM502242_168(AM502242|pid:none) Leishmania infantum chromosome 24. 98 2e-18
CT005263_229(CT005263|pid:none) Leishmania major strain Friedlin... 97 5e-18
CT005272_316(CT005272|pid:none) Leishmania major strain Friedlin... 83 5e-17
BC019661_1(BC019661|pid:none) Mus musculus cullin 5, mRNA (cDNA ... 91 2e-16
AP008218_551(AP008218|pid:none) Oryza sativa (japonica cultivar-... 89 1e-15
AY809822_1(AY809822|pid:none) Schistosoma japonicum SJCHGC05790 ... 87 3e-15
AP008209_2850(AP008209|pid:none) Oryza sativa (japonica cultivar... 85 2e-14
AY815824_1(AY815824|pid:none) Schistosoma japonicum SJCHGC09488 ... 84 5e-14
FN392319_1406(FN392319|pid:none) Pichia pastoris GS115 chromosom... 83 6e-14
CT005264_131(CT005264|pid:none) Leishmania major strain Friedlin... 52 1e-13
DQ431854_1(DQ431854|pid:none) Oryza sativa cullin mRNA, partial ... 82 1e-13
AF126814_1(AF126814|pid:none) Strongyloides stercoralis cullin-l... 80 5e-13
AM502243_134(AM502243|pid:none) Leishmania infantum chromosome 25. 51 1e-12
CR940353_538(CR940353|pid:none) Theileria annulata strain Ankara... 78 2e-12
AL392046_4(AL392046|pid:none) Human DNA sequence from clone RP11... 77 3e-12
AC159451_26(AC159451|pid:none) Trypanosoma brucei chromosome 8 c... 57 8e-12
BT052950_1(BT052950|pid:none) Medicago truncatula clone MTYFL_FM... 72 1e-10
AK164640_1(AK164640|pid:none) Mus musculus 13 days embryo stomac... 72 1e-10
AK080305_1(AK080305|pid:none) Mus musculus 3 days neonate thymus... 70 4e-10
AM494965_231(AM494965|pid:none) Leishmania braziliensis chromoso... 57 2e-09
AK003885_1(AK003885|pid:none) Mus musculus 18-day embryo whole b... 68 2e-09
A96622(A96622) hypothetical protein F23H11.12 [imported] - Arabi... 68 2e-09
AJ344536_1(AJ344536|pid:none) Nicotiana tabacum partial mRNA for... 67 6e-09
FN357969_1(FN357969|pid:none) Schistosoma mansoni genome sequenc... 64 3e-08
FM992688_565(FM992688|pid:none) Candida dubliniensis CD36 chromo... 64 5e-08
AL844505_293(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 52 2e-07
AC116921_4(AC116921|pid:none) Dictyostelium discoideum chromosom... 62 2e-07
AL590447_86(AL590447|pid:none) chromosome VII of strain GB-M1 of... 57 5e-06
CT009752_218(CT009752|pid:none) Trypanosoma brucei chromosome 10... 57 6e-06
AC159411_30(AC159411|pid:none) Trypanosoma brucei chromosome 3 c... 55 2e-05
AK030306_1(AK030306|pid:none) Mus musculus 11 days pregnant adul... 54 4e-05
AP003246_32(AP003246|pid:none) Oryza sativa Japonica Group genom... 53 7e-05
EU960376_1(EU960376|pid:none) Zea mays clone 224320 cullin-1 mRN... 53 7e-05
BC001579_1(BC001579|pid:none) Homo sapiens anaphase promoting co... 40 1e-04
AB037827_1(AB037827|pid:none) Homo sapiens mRNA for KIAA1406 pro... 40 1e-04
FN358401_1(FN358401|pid:none) Schistosoma mansoni genome sequenc... 52 1e-04
BC166796_1(BC166796|pid:none) Rattus norvegicus anaphase promoti... 40 1e-04
BC107471_1(BC107471|pid:none) Rattus norvegicus anaphase promoti... 40 1e-04
BC027351_1(BC027351|pid:none) Mus musculus anaphase promoting co... 40 2e-04
AK154465_1(AK154465|pid:none) Mus musculus NOD-derived CD11c +ve... 40 2e-04
AM910993_191(AM910993|pid:none) Plasmodium knowlesi strain H chr... 49 0.001
FB918080_1(FB918080|pid:none) Sequence 137353 from Patent WO2008... 47 0.006
FB811741_1(FB811741|pid:none) Sequence 31014 from Patent WO20080... 46 0.008
CU928180_471(CU928180|pid:none) Kluyveromyces thermotolerans str... 46 0.008
BT088647_1(BT088647|pid:none) Zea mays full-length cDNA clone ZM... 46 0.008
AK166251_1(AK166251|pid:none) Mus musculus mammary gland RCB-052... 45 0.019
EU975191_1(EU975191|pid:none) Zea mays clone 483961 ATP binding ... 45 0.019
FB918016_1(FB918016|pid:none) Sequence 137289 from Patent WO2008... 45 0.024
AK088696_1(AK088696|pid:none) Mus musculus 2 days neonate thymus... 45 0.024
(Q9QVP9) RecName: Full=Protein tyrosine kinase 2 beta; ... 45 0.024
AK150105_1(AK150105|pid:none) Mus musculus bone marrow macrophag... 45 0.024
GN105678_1(GN105678|pid:none) Sequence 10459 from Patent WO20090... 44 0.042
BC124567_1(BC124567|pid:none) Xenopus tropicalis hypothetical pr... 44 0.055
EU971259_1(EU971259|pid:none) Zea mays clone 360618 ATP binding ... 44 0.055
(P70600) RecName: Full=Protein tyrosine kinase 2 beta; ... 43 0.071
A57434(A57434) protein-tyrosine kinase (EC 2.7.1.112) CAK-beta -... 43 0.071
BC150125_1(BC150125|pid:none) Bos taurus PTK2B protein tyrosine ... 43 0.071
AY347832_1(AY347832|pid:none) Malus x domestica clone 17-4 prote... 43 0.071
AY891239_1(AY891239|pid:none) Synthetic construct Homo sapiens c... 43 0.093
EU441366_1(EU441366|pid:none) Xenopus borealis clone Cullin3.a c... 43 0.093
(P47050) RecName: Full=Cullin-8; AltName: Full=Regulator of Ty1 ... 43 0.093
L49207_1(L49207|pid:none) Homo sapiens (clone B6a) focal adhesio... 43 0.093
U43522_1(U43522|pid:none) Human cell adhesion kinase beta (CAKbe... 43 0.093
CT005266_219(CT005266|pid:none) Leishmania major strain Friedlin... 42 0.12
CR860162_1(CR860162|pid:none) Pongo abelii mRNA; cDNA DKFZp459L1... 42 0.12
BT055249_1(BT055249|pid:none) Zea mays full-length cDNA clone ZM... 42 0.16
U01064_1(U01064|pid:none) Dictyostelium discoideum AX2 protein t... 41 0.27
AM502246_221(AM502246|pid:none) Leishmania infantum chromosome 28. 41 0.27
T18287(T18287) protein-tyrosine kinase (EC 2.7.1.112) - slime mo... 41 0.27
(Q54I36) RecName: Full=Dual specificity protein kinase dpyk3; ... 41 0.27
AM494972_262(AM494972|pid:none) Leishmania braziliensis chromoso... 41 0.27
S44845(S44845)K06H7.5 protein - Caenorhabditis elegans 40 0.46
I39932(I39932) replication protein ori60 - Bacillus thuringiensi... 40 0.46
AE014298_1191(AE014298|pid:none) Drosophila melanogaster chromos... 40 0.46
BC084174_1(BC084174|pid:none) Xenopus tropicalis PTK2B protein t... 40 0.46
CP000962_3547(CP000962|pid:none) Clostridium botulinum A3 str. L... 40 0.46
AP008218_325(AP008218|pid:none) Oryza sativa (japonica cultivar-... 40 0.46
BX004769_2(BX004769|pid:none) Zebrafish DNA sequence from clone ... 40 0.46
(Q95UN8) RecName: Full=Mitogen-activated protein kinase kinase k... 40 0.46
AY119549_1(AY119549|pid:none) Drosophila melanogaster GH26507 fu... 40 0.46
EU957691_1(EU957691|pid:none) Zea mays clone 1610265 ATP binding... 40 0.60
AB049734_1(AB049734|pid:none) Homo sapiens mRNA for MLTK-beta, c... 40 0.60
(Q9NYE9) RecName: Full=Mitogen-activated protein kinase kinase k... 40 0.60
AK298634_1(AK298634|pid:none) Homo sapiens cDNA FLJ58036 complet... 40 0.60
AB049732_1(AB049732|pid:none) Mus musculus mRNA for MLTK-beta, c... 40 0.60
AB049733_1(AB049733|pid:none) Homo sapiens mRNA for MLTK-alpha, ... 40 0.60
AB030034_1(AB030034|pid:none) Homo sapiens mlklak mRNA for plauc... 40 0.60
FB811775_1(FB811775|pid:none) Sequence 31048 from Patent WO20080... 40 0.60
EF068148_1(EF068148|pid:none) Nematostella vectensis fibroblast ... 40 0.60
AF238255_1(AF238255|pid:none) Homo sapiens mixed lineage kinase ... 40 0.60
AB384803_1(AB384803|pid:none) Synthetic construct DNA, clone: pF... 40 0.60
AF465843_1(AF465843|pid:none) Homo sapiens cervical cancer suppr... 40 0.60
BC052457_1(BC052457|pid:none) Mus musculus kit oncogene, mRNA (c... 40 0.79
AY536430_1(AY536430|pid:none) Mus musculus proto-oncogene c-kit ... 40 0.79
CQ834624_1(CQ834624|pid:none) Sequence 495 from Patent WO2004058... 40 0.79
CT005272_249(CT005272|pid:none) Leishmania major strain Friedlin... 40 0.79
AY093017_1(AY093017|pid:none) Arabidopsis thaliana putative prot... 40 0.79
CU179680_609(CU179680|pid:none) Mycoplasma agalactiae PG2 chromo... 40 0.79
AY536431_1(AY536431|pid:none) Mus musculus mutant proto-oncogene... 40 0.79
A49814(A49814;S49088) protein-tyrosine kinase (EC 2.7.1.112), re... 40 0.79
(P05532) RecName: Full=Mast/stem cell growth factor receptor; ... 40 0.79
FN392319_442(FN392319|pid:none) Pichia pastoris GS115 chromosome... 39 1.0
BT055671_1(BT055671|pid:none) Zea mays full-length cDNA clone ZM... 39 1.0
BT071723_1(BT071723|pid:none) Picea sitchensis clone WS0443_C13 ... 39 1.0
AM432244_1(AM432244|pid:none) Vitis vinifera contig VV78X238076.... 39 1.0
CP001170_2(CP001170|pid:none) Bacillus cereus H3081.97 plasmid p... 39 1.0
BT071275_1(BT071275|pid:none) Picea sitchensis clone WS02817_H11... 39 1.0
CP000721_2634(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 39 1.3
AY145132_1(AY145132|pid:none) Homo sapiens p53-associated parkin... 39 1.3
AY538266_1(AY538266|pid:none) Danio rerio TGF-beta-activated kin... 39 1.3
BC163886_1(BC163886|pid:none) Danio rerio protein tyrosine kinas... 39 1.3
AP008212_700(AP008212|pid:none) Oryza sativa (japonica cultivar-... 39 1.3
CP001078_1987(CP001078|pid:none) Clostridium botulinum E3 str. A... 39 1.3
AM050293_1(AM050293|pid:none) Sparus aurata mRNA for macrophage ... 39 1.3
BT064614_1(BT064614|pid:none) Zea mays full-length cDNA clone ZM... 39 1.3
AJ786604_1(AJ786604|pid:none) Plasmodium reichenowi msp1 gene fo... 39 1.3
FB811739_1(FB811739|pid:none) Sequence 31012 from Patent WO20080... 39 1.3
FB811743_1(FB811743|pid:none) Sequence 31016 from Patent WO20080... 39 1.3
(Q55GG4) RecName: Full=Probable serine/threonine-protein kinase ... 39 1.3
CR749511_1(CR749511|pid:none) Homo sapiens mRNA; cDNA DKFZp686P2... 39 1.3
BC002879_1(BC002879|pid:none) Homo sapiens cullin 9, mRNA (cDNA ... 39 1.3
AK103704_1(AK103704|pid:none) Oryza sativa Japonica Group cDNA c... 39 1.8
BC171673_1(BC171673|pid:none) Danio rerio protein kinase Npk, mR... 39 1.8
(Q55GE6) RecName: Full=Probable serine/threonine-protein kinase ... 39 1.8
FB918052_1(FB918052|pid:none) Sequence 137325 from Patent WO2008... 39 1.8
BT069090_1(BT069090|pid:none) Zea mays full-length cDNA clone ZM... 39 1.8
AL031135_29(AL031135|pid:none) Arabidopsis thaliana DNA chromoso... 39 1.8
AY232269_1(AY232269|pid:none) Dictyostelium discoideum putative ... 39 1.8
FN357489_25(FN357489|pid:none) Schistosoma mansoni genome sequen... 39 1.8
AY888544_1(AY888544|pid:none) Synthetic construct Homo sapiens c... 38 2.3
AB009356_1(AB009356|pid:none) Homo sapiens TAK1a mRNA for TGF-be... 38 2.3
AF265343_1(AF265343|pid:none) Danio rerio protein kinase Npk mRN... 38 2.3
BC148094_1(BC148094|pid:none) Bos taurus receptor-interacting se... 38 2.3
AB009358_1(AB009358|pid:none) Homo sapiens mRNA for TGF-beta act... 38 2.3
(O97799) RecName: Full=Mast/stem cell growth factor receptor; ... 38 2.3
AK299268_1(AK299268|pid:none) Homo sapiens cDNA FLJ55358 complet... 38 2.3
AF044249_1(AF044249|pid:none) Canis familiaris receptor tyrosine... 38 2.3
AY085263_1(AY085263|pid:none) Arabidopsis thaliana clone 142106 ... 38 2.3
AK221724_1(AK221724|pid:none) Arabidopsis thaliana mRNA for puta... 38 2.3
T08864(T08864)hypothetical protein A_TM017A05.2 - Arabidopsis th... 38 2.3
JC5957(JC5957)transforming growth factor-beta activated kinase (... 38 2.3
AB026650_1(AB026650|pid:none) Arabidopsis thaliana genomic DNA, ... 38 2.3
EF014128_1(EF014128|pid:none) Synthetic construct flag-tagged pr... 38 2.3
AY891194_1(AY891194|pid:none) Synthetic construct Homo sapiens c... 38 2.3
AF487541_1(AF487541|pid:none) Danio rerio protein kinase PKK (pk... 38 2.3
(Q8MVR1) RecName: Full=Cyclic GMP-binding protein C; EC... 38 2.3
(P0C8E4) RecName: Full=Mitogen-activated protein kinase kinase k... 38 2.3
AY335698_1(AY335698|pid:none) Synthetic construct Homo sapiens m... 38 2.3
EU399818_1(EU399818|pid:none) Sus scrofa TGF-beta activated kina... 38 2.3
AY888543_1(AY888543|pid:none) Synthetic construct Homo sapiens c... 38 2.3
FB918146_1(FB918146|pid:none) Sequence 137419 from Patent WO2008... 38 2.3
AK159277_1(AK159277|pid:none) Mus musculus osteoclast-like cell ... 38 2.3
(O43318) RecName: Full=Mitogen-activated protein kinase kinase k... 38 2.3
EF014113_1(EF014113|pid:none) Synthetic construct flag-tagged pr... 38 2.3
EU399819_1(EU399819|pid:none) Sus scrofa TGF-beta activated kina... 38 2.3
BC065421_1(BC065421|pid:none) Mus musculus anaphase promoting co... 38 3.0
DQ288944_1(DQ288944|pid:none) Sus scrofa mast/stem cell growth f... 38 3.0
CQ898728_1(CQ898728|pid:none) Sequence 1 from Patent WO2004092356. 38 3.0
AJ417832_1(AJ417832|pid:none) Oncorhynchus mykiss mRNA for macro... 38 3.0
AJ223228_1(AJ223228|pid:none) Sus scrofa mRNA for mast/stem cell... 38 3.0
(Q5UNU5) RecName: Full=Uncharacterized protein L684; &AY653733_... 38 3.0
BC077258_1(BC077258|pid:none) Xenopus laevis TAK1, mRNA (cDNA cl... 38 3.0
AK158195_1(AK158195|pid:none) Mus musculus adult inner ear cDNA,... 38 3.0
AY323833_2(AY323833|pid:none) Mus musculus guanylyl cyclase-B1, ... 38 3.0
FB811737_1(FB811737|pid:none) Sequence 31010 from Patent WO20080... 38 3.0
AL732626_10(AL732626|pid:none) Mouse DNA sequence from clone RP2... 38 3.0
CP000675_2650(CP000675|pid:none) Legionella pneumophila str. Cor... 38 3.0
BC023420_1(BC023420|pid:none) Mus musculus natriuretic peptide r... 38 3.0
FB653048_1(FB653048|pid:none) Sequence 64 from Patent WO20070138... 38 3.0
AL031018_23(AL031018|pid:none) Arabidopsis thaliana DNA chromoso... 38 3.0
AK066198_1(AK066198|pid:none) Oryza sativa Japonica Group cDNA c... 38 3.0
DQ386647_1(DQ386647|pid:none) Astatotilapia burtoni clone BAC 20... 38 3.0
BC071593_1(BC071593|pid:none) Homo sapiens v-kit Hardy-Zuckerman... 38 3.0
(Q6XHA7) RecName: Full=Probable serine/threonine-protein kinase ... 38 3.0
DQ314491_1(DQ314491|pid:none) Bubalus bubalis tissue-type testis... 38 3.0
AC151823_16(AC151823|pid:none) Medicago truncatula clone mth2-45... 38 3.0
AM910989_8(AM910989|pid:none) Plasmodium knowlesi strain H chrom... 38 3.0
(Q6VVW5) RecName: Full=Atrial natriuretic peptide receptor B; ... 38 3.0
AB463344_1(AB463344|pid:none) Synthetic construct DNA, clone: pF... 38 3.0
AF263826_1(AF263826|pid:none) Bos taurus breed Hereford C-KIT pr... 38 3.0
(P43481) RecName: Full=Mast/stem cell growth factor receptor; ... 38 3.0
(Q5JJY4) RecName: Full=Protein kinase and PP2C-like domain-conta... 37 3.9
(P07333) RecName: Full=Macrophage colony-stimulating factor 1 re... 37 3.9
BC047521_1(BC047521|pid:none) Homo sapiens colony stimulating fa... 37 3.9
FB830010_1(FB830010|pid:none) Sequence 49283 from Patent WO20080... 37 3.9
FJ938289_1(FJ938289|pid:none) Sus scrofa mast/stem cell growth f... 37 3.9
AF055037_1(AF055037|pid:none) Equus caballus tyrosine kinase rec... 37 3.9
CP001393_200(CP001393|pid:none) Anaerocellum thermophilum DSM 67... 37 3.9
BT058757_1(BT058757|pid:none) Salmo salar clone ssal-rgf-501-145... 37 3.9
AK243345_1(AK243345|pid:none) Oryza sativa Japonica Group cDNA, ... 37 3.9
(Q54R58) RecName: Full=Probable tyrosine-protein kinase DDB_G028... 37 3.9
AY890719_1(AY890719|pid:none) Synthetic construct Homo sapiens c... 37 3.9
AJ490510_1(AJ490510|pid:none) Danio rerio mRNA for proline-rich ... 37 3.9
AY582832_1(AY582832|pid:none) Rhizophlyctis rosea strain CBS 576... 37 3.9
CP000553_701(CP000553|pid:none) Prochlorococcus marinus str. NAT... 37 3.9
AL844505_260(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 37 3.9
AJ223229_1(AJ223229|pid:none) Sus scrofa mRNA for mast/stem cell... 37 3.9
EF035010_1(EF035010|pid:none) Danio albolineatus kit receptor ty... 37 5.1
(Q05397) RecName: Full=Focal adhesion kinase 1; Short=F... 37 5.1
(Q9BXT5) RecName: Full=Testis-expressed sequence 15 protein; Alt... 37 5.1
FN357683_3(FN357683|pid:none) Schistosoma mansoni genome sequenc... 37 5.1
FN360026_1(FN360026|pid:none) Schistosoma mansoni genome sequenc... 37 5.1
BC028733_1(BC028733|pid:none) Homo sapiens PTK2 protein tyrosine... 37 5.1
(Q96S53) RecName: Full=Dual specificity testis-specific protein ... 37 5.1
BC140934_1(BC140934|pid:none) Homo sapiens testis expressed 15, ... 37 5.1
CP000497_185(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 37 5.1
BT061109_1(BT061109|pid:none) Zea mays full-length cDNA clone ZM... 37 5.1
AK294873_1(AK294873|pid:none) Homo sapiens cDNA FLJ57973 complet... 37 5.1
AL691516_1(AL691516|pid:none) Zebrafish DNA sequence from clone ... 37 5.1
(Q76II0) RecName: Full=Mast/stem cell growth factor receptor; ... 37 5.1
BT063674_1(BT063674|pid:none) Zea mays full-length cDNA clone ZM... 37 5.1
L05186_1(L05186|pid:none) Homo sapiens focal adhesion kinase mRN... 37 5.1
BC035404_1(BC035404|pid:none) Homo sapiens PTK2 protein tyrosine... 37 5.1
AC138131_23(AC138131|pid:none) Medicago truncatula clone mth2-21... 37 5.1
AK304356_1(AK304356|pid:none) Homo sapiens cDNA FLJ61553 complet... 37 5.1
BC162502_1(BC162502|pid:none) Danio rerio kit receptor a, mRNA (... 37 5.1
(Q95YM9) RecName: Full=Fibroblast growth factor receptor; ... 37 5.1
AF303661_1(AF303661|pid:none) Halocynthia roretzi FGF receptor (... 37 5.1
AE016819_870(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 37 5.1
AJ132545_1(AJ132545|pid:none) Homo sapiens mRNA for protein kina... 37 5.1
AB209071_1(AB209071|pid:none) Homo sapiens mRNA for PTK2 protein... 37 5.1
AF153446_1(AF153446|pid:none) Danio rerio kit receptor tyrosine ... 37 5.1
BC169867_1(BC169867|pid:none) Xenopus laevis focal adhesion kina... 37 6.7
A45388(A45388)protein-tyrosine kinase (EC 2.7.1.112) - chicken 37 6.7
(P34152) RecName: Full=Focal adhesion kinase 1; Short=F... 37 6.7
FN392320_1280(FN392320|pid:none) Pichia pastoris GS115 chromosom... 37 6.7
BT084334_1(BT084334|pid:none) Zea mays full-length cDNA clone ZM... 37 6.7
AK220543_1(AK220543|pid:none) Mus musculus mRNA for mKIAA4203 pr... 37 6.7
AY144487_1(AY144487|pid:none) Lytechinus variegatus focal adhesi... 37 6.7
JC5494(JC5494)protein-tyrosine kinase (EC 2.7.1.112) - rat 37 6.7
CP000852_369(CP000852|pid:none) Caldivirga maquilingensis IC-167... 37 6.7
CR381644_1(CR381644|pid:none) Zebrafish DNA sequence from clone ... 37 6.7
AM420315_1(AM420315|pid:none) Equus caballus genomic BAC clone C... 37 6.7
A46166(A46166;S27877) protein-tyrosine kinase (EC 2.7.1.112) - m... 37 6.7
CP001047_350(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 37 6.7
EF043704_1(EF043704|pid:none) Synthetic construct clone ATCC 103... 37 6.7
AP005297_10(AP005297|pid:none) Oryza sativa Japonica Group genom... 37 6.7
BC071046_1(BC071046|pid:none) Xenopus laevis hypothetical protei... 37 6.7
(Q01877) RecName: Full=Heat shock protein HSS1; &U26597_1(U2659... 37 6.7
(Q00944) RecName: Full=Focal adhesion kinase 1; Short=F... 37 6.7
CR628336_2696(CR628336|pid:none) Legionella pneumophila str. Par... 37 6.7
BT045929_1(BT045929|pid:none) Salmo salar clone ssal-rgf-536-368... 36 8.7
BC049005_1(BC049005|pid:none) Xenopus laevis similar to mitogen-... 36 8.7
BC162475_1(BC162475|pid:none) Danio rerio protein tyrosine kinas... 36 8.7
AE014188_167(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 36 8.7
AL009126_709(AL009126|pid:none) Bacillus subtilis subsp. subtili... 36 8.7
BC136216_1(BC136216|pid:none) Xenopus tropicalis mitogen-activat... 36 8.7
AE009951_1732(AE009951|pid:none) Fusobacterium nucleatum subsp. ... 36 8.7
CP000742_6(CP000742|pid:none) Methanococcus vannielii SB, comple... 36 8.7
AP004654_19(AP004654|pid:none) Oryza sativa Japonica Group genom... 36 8.7
EU016582_1(EU016582|pid:none) Uncultured marine microorganism HF... 36 8.7
BC064688_1(BC064688|pid:none) Xenopus laevis hypothetical protei... 36 8.7
>(O60999) RecName: Full=Cullin-1; Short=CUL-1; AltName:
Full=Cullin-A; &AF020287_1(AF020287|pid:none)
Length = 770
Score = 996 bits (2576), Expect(2) = 0.0
Identities = 500/500 (100%), Positives = 500/500 (100%)
Frame = +1
Query: 547 VKLDDIWPELEEGIYKIITDLNKGFPKQKWIALYTHVYDYCAASQSKSSAKVGMPKQQAS 726
VKLDDIWPELEEGIYKIITDLNKGFPKQKWIALYTHVYDYCAASQSKSSAKVGMPKQQAS
Sbjct: 13 VKLDDIWPELEEGIYKIITDLNKGFPKQKWIALYTHVYDYCAASQSKSSAKVGMPKQQAS 72
Query: 727 GANYVGEDLYNRLNLFLKKHMSQLLKLTETKMDEPLLNYYYTEWDRYTSAMKYINNIFQY 906
GANYVGEDLYNRLNLFLKKHMSQLLKLTETKMDEPLLNYYYTEWDRYTSAMKYINNIFQY
Sbjct: 73 GANYVGEDLYNRLNLFLKKHMSQLLKLTETKMDEPLLNYYYTEWDRYTSAMKYINNIFQY 132
Query: 907 MNRYWIKREIDDGKKEVYEIFILSLVIWRDCLFTPLKQRLTNSLLDIIESERNGYQINTH 1086
MNRYWIKREIDDGKKEVYEIFILSLVIWRDCLFTPLKQRLTNSLLDIIESERNGYQINTH
Sbjct: 133 MNRYWIKREIDDGKKEVYEIFILSLVIWRDCLFTPLKQRLTNSLLDIIESERNGYQINTH 192
Query: 1087 LIKGVINGYVSLGLNREKPKETILQVYKSGFEELFLTATENYYTNESAKFISENSVADYM 1266
LIKGVINGYVSLGLNREKPKETILQVYKSGFEELFLTATENYYTNESAKFISENSVADYM
Sbjct: 193 LIKGVINGYVSLGLNREKPKETILQVYKSGFEELFLTATENYYTNESAKFISENSVADYM 252
Query: 1267 KKVETRLNEEVKRVQQYLHQNTESELIAKCEKVLIEKHVEVIWNEFQTLLEKDKIPDLTR 1446
KKVETRLNEEVKRVQQYLHQNTESELIAKCEKVLIEKHVEVIWNEFQTLLEKDKIPDLTR
Sbjct: 253 KKVETRLNEEVKRVQQYLHQNTESELIAKCEKVLIEKHVEVIWNEFQTLLEKDKIPDLTR 312
Query: 1447 MYSLLSRIPRGLEPLRTTLEKHVQNVGLQAVSSIATNGVIEPKVYIETLLKVFKKYNELV 1626
MYSLLSRIPRGLEPLRTTLEKHVQNVGLQAVSSIATNGVIEPKVYIETLLKVFKKYNELV
Sbjct: 313 MYSLLSRIPRGLEPLRTTLEKHVQNVGLQAVSSIATNGVIEPKVYIETLLKVFKKYNELV 372
Query: 1627 TGAFRSDTGFVASLDKACRRFINENAVTIAAKSSSKSPELLARFTDFLLKKSPNNPEESE 1806
TGAFRSDTGFVASLDKACRRFINENAVTIAAKSSSKSPELLARFTDFLLKKSPNNPEESE
Sbjct: 373 TGAFRSDTGFVASLDKACRRFINENAVTIAAKSSSKSPELLARFTDFLLKKSPNNPEESE 432
Query: 1807 MEQLLNDVMIVFKYIEDKDVFQDFYSKMLAKRLIHGTSTSEDLEGTMIGKLKSTCGYEYT 1986
MEQLLNDVMIVFKYIEDKDVFQDFYSKMLAKRLIHGTSTSEDLEGTMIGKLKSTCGYEYT
Sbjct: 433 MEQLLNDVMIVFKYIEDKDVFQDFYSKMLAKRLIHGTSTSEDLEGTMIGKLKSTCGYEYT 492
Query: 1987 SKLQRMFTDMSLSRELLDRF 2046
SKLQRMFTDMSLSRELLDRF
Sbjct: 493 SKLQRMFTDMSLSRELLDRF 512
Score = 493 bits (1270), Expect(2) = 0.0
Identities = 251/251 (100%), Positives = 251/251 (100%)
Frame = +2
Query: 2048 NNHIEQVERSSLNIDFSVLVLATGSWPLQPPSTNFSIPKELQACEQLFQKFYQNQHSGRK 2227
NNHIEQVERSSLNIDFSVLVLATGSWPLQPPSTNFSIPKELQACEQLFQKFYQNQHSGRK
Sbjct: 513 NNHIEQVERSSLNIDFSVLVLATGSWPLQPPSTNFSIPKELQACEQLFQKFYQNQHSGRK 572
Query: 2228 LNWLHHLSKGELKTKYLQTSKSGYTLQCSTYQIGVLLQFNQYETLTSEEIQESTQLIDSV 2407
LNWLHHLSKGELKTKYLQTSKSGYTLQCSTYQIGVLLQFNQYETLTSEEIQESTQLIDSV
Sbjct: 573 LNWLHHLSKGELKTKYLQTSKSGYTLQCSTYQIGVLLQFNQYETLTSEEIQESTQLIDSV 632
Query: 2408 LKGTLTSLAKSKILLADPPLDDEEIAKTTKFSLNKQFKNKKTKIFINVPVLTQVKEEIDS 2587
LKGTLTSLAKSKILLADPPLDDEEIAKTTKFSLNKQFKNKKTKIFINVPVLTQVKEEIDS
Sbjct: 633 LKGTLTSLAKSKILLADPPLDDEEIAKTTKFSLNKQFKNKKTKIFINVPVLTQVKEEIDS 692
Query: 2588 IHKTVEEDRKLQIQAAIVRIMKMRKQLAHSGLMTEVISQLQTRFNPKVNIIKKCIDILIE 2767
IHKTVEEDRKLQIQAAIVRIMKMRKQLAHSGLMTEVISQLQTRFNPKVNIIKKCIDILIE
Sbjct: 693 IHKTVEEDRKLQIQAAIVRIMKMRKQLAHSGLMTEVISQLQTRFNPKVNIIKKCIDILIE 752
Query: 2768 KEYLMRVEGKK 2800
KEYLMRVEGKK
Sbjct: 753 KEYLMRVEGKK 763
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 4,330,234,318
Number of extensions: 82820233
Number of successful extensions: 241296
Number of sequences better than 10.0: 438
Number of HSP's gapped: 240364
Number of HSP's successfully gapped: 636
Length of query: 1180
Length of database: 1,040,966,779
Length adjustment: 140
Effective length of query: 1040
Effective length of database: 592,366,879
Effective search space: 616061554160
Effective search space used: 616061554160
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
2 |
| VF (FL, S) |
0 |
| AH (FL, L) |
3 |
| AF (FL, S) |
1 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
3 |
| SH (FL, L) |
3 |
| SF (FL, S) |
1 |
| CH (FL, L) |
9 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |