Contig-U11419-1
Contig ID Contig-U11419-1
Contig update 2002.12.18
Contig sequence
>Contig-U11419-1 (Contig-U11419-1Q) /CSM_Contig/Contig-U11419-1Q.Seq.d
CAGATGGAAAAAGTTGTGTTTCATCTCCAAAAAATTGTAATGATACCAGT
TTTTGTACTATTGATAGTTGTAATTCACCAAATGGAACGTGTTCACATTC
ATTTCCAGATCCTAAATGTGTATCTTGTGCATCCACATCATGTACTACAA
CTGATGATTGCTTAGTTCAAGTTTGTAGTGATGATGGAGCCAGTTGTAAT
TCAATACCAAAAAATTGTGATGACAAAAACCCTTGTACACAAGATAGTTG
CTCAAATAATGGAGTTTGTGCATACACTCCCATTCCAAATTGTTCAATTT
GTAACAGTACTTTCGGCTGCATTACCACCGATTTATGTCAACCAATGGTT
TGTACAGATCCAGATCTTAAATGTGAGATAGATCAAACTCTATGTAATGA
TGATAACTTTTGTACCACTGATAGTTGCTCAGGAAATGGTATTTGTGCAC
ACACTCCTGTTGATAGTTGTTTAACCTGTTCAAAAAATATTGGTTGTATT
ACTGTAGATAAATGTAATCCTCAGATCTGTTCAAATGATAATAAATCATG
TATCACCGGAGATAATGGGTGTGATAAAGGTGATAAATGTTCAATAGCTT
CATGTGAATCGCCAGCAGGTAATTGTAAATCAACTCCAGTAGTTTGTGAT
GATAATGATCCTTGTACAATTGATAGTTGTAACCCAGCAGATGGAACTTG
TGTACATCAAGATATTAATAACTGTGCTGAATGTGGTAAACTTGGATGTA
TTACAAGCAATCCTTGTCAGCCAGTTTCTTGTTCAATCACTGGCACAGAA
TGTAATAAAACAAAAATTTCATGCGATGATAAAAATCATTGCACTCAAGA
TGCATGTTCGATAAAAGATGGCTCTTGTTATCATGCAACAATTAATAATT
GTATTGATTGCGCAAATCAAGCGTGTATTACATTTGACGCTTGTAAACCA
AAAAAATGTGGAGCTGATGGTAATTGCTATGAAGATCCAGTAACCTGCGA
TGATGGAAATGGGTGTACAATTGATAGTTGTTCAAGAAATGGTACTTGTT
CAAACAAATTAATTGAAAACTGTGTTAGTTGTAAT----------TATAC
CAAAAGAAAATTGTGAAGTTTGCTCAAAAACTTTATATTGTANAACTGAT
AACCCATGTGAGCTTAGTGTCTGTCCAGATAATAAAGATTCATGTATCAC
CAAACCTTTAAATTGTGATGATGATGATAGTTGTACAATAGATTCTTGTA
GTCCTGATACCAATTGTACTCATACCCGTATTGCAGGTTGTCGAGCAGTT
CCAACAACAACTGGAATAGCACCTCACACTCACTATTGTGACTATTGTCA
TGATACTGAAATATGTATTCTAATTGGTGATGTTCCTACTTGTGTACCAA
CATCAACAACATCATCAATACCATTAACAACAGTAACAACAGATATTGAA
TTAGTTGTTACATCTGGTATATATTCCACTGGCCATTTCACTGAAAGTGG
AACCACTTTTGGAGATAAACCCAGTACAACCACGTCAGAATTAGTATCAA
CAACCTCCTCTACACCTCCTTATTACAATCTTTGCGATAGAGTAAGATGC
GGTAAAGGTTTAGAATGTTATATGATTGATAATAAACCTGAATGTCTACC
ATCAAATTACCAATGTATGGACTGTTGGGATTTACTTTGTCATCTTCAAG
ATTTATCTTGTAAAATGGTTTTAAATCCCCATTTCATTACTGATAAATAT
GGTCAAGTTTGTTGTAAATTCATACCAACGTGTATACCAAGATAAATTAA
ATTCTAAAACTATAGAAATGCATAATTAGGA

Gap gap included
Contig length 1821
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 671159
End point 672980
Strand (PLUS/MINUS) PLUS
Number of clones 5
Number of EST 6
Link to clone list U11419
List of clone(s)

est1=CHG583F,1,701
est2=SHA373F,63,632
est3=AHJ370F,423,1085
est4=AHJ370Z,1086,1660
est5=SFL474Z,1163,1783
est6=SLC611Z,1255,1822
Translated Amino Acid sequence
DGKSCVSSPKNCNDTSFCTIDSCNSPNGTCSHSFPDPKCVSCASTSCTTTDDCLVQVCSD
DGASCNSIPKNCDDKNPCTQDSCSNNGVCAYTPIPNCSICNSTFGCITTDLCQPMVCTDP
DLKCEIDQTLCNDDNFCTTDSCSGNGICAHTPVDSCLTCSKNIGCITVDKCNPQICSNDN
KSCITGDNGCDKGDKCSIASCESPAGNCKSTPVVCDDNDPCTIDSCNPADGTCVHQDINN
CAECGKLGCITSNPCQPVSCSITGTECNKTKISCDDKNHCTQDACSIKDGSCYHATINNC
IDCANQACITFDACKPKKCGADGNCYEDPVTCDDGNGCTIDSCSRNGTCSNKLIENCVSC
N---

---IPKENCEVCSKTLYCXTDNPCELSVCPDNKDSCITKPLNCDDDDSCTIDSCSPDTNC
THTRIAGCRAVPTTTGIAPHTHYCDYCHDTEICILIGDVPTCVPTSTTSSIPLTTVTTDI
ELVVTSGIYSTGHFTESGTTFGDKPSTTTSELVSTTSSTPPYYNLCDRVRCGKGLECYMI
DNKPECLPSNYQCMDCWDLLCHLQDLSCKMVLNPHFITDKYGQVCCKFIPTCIPR*ikf*
nyrna*lg


Translated Amino Acid sequence (All Frames)
Frame A:
qmekvvfhlqkivmipvfvllivvihqmervhihfqilnvylvhphhvlqlmia*fkfvv
mmepvviqyqkivmtktlvhkivaqimefvhtlpfqivqfvtvlsaalppiyvnqwfvqi
qilnvr*iklyvmmitfvplivaqemvfvhtlllivv*pvqkilvvll*invilrsvqmi
inhvspeimgvikvinvq*lhvnrqqvivnqlq*fvmimilvqlivvtqqmelvyikili
tvlnvvnldvlqailvsqflvqslaqnvikqkfhamikiialkmhvr*kmalvimqqlii
vliaqikrvlhltlvnqknvelmviamkiq*pammemgvqlivvqemvlvqtn*lktvlv
v---

---ytkrkl*sllknfilxn**pm*a*clsr**rfmyhqtfkl*****lynrfl*s*yql
ysypycrlssssnnnwnstshsll*lls*y*nmysnw*csylctninniintinnsnnry
*iscyiwyifhwpfh*kwnhfwr*tqynhvrisinnllytsllqslr*skmr*rfrmlyd
***t*mstiklpmygllgftlsssrfil*ngfkspfhy**iwssll*ihtnvytkin*il
kl*kciir

Frame B:
rwkklcfiskkl**yqflyy**l*ftkwnvftfisrs*mcilcihimyyn**llsssl**
*wsql*fntkkl**qkplytr*llk*wslcihshsklfnl*qyfrlhyhrfmstnglyrs
rs*m*drsnsm****llyh**llrkwylcthsc**lfnlfkkywlyycr*m*ssdlfk**
*imyhrr*wv**r**mfnsfm*iasr*l*insssl****slyn**l*psrwnlctsry**
lc*mw*twmyykqslsasflfnhwhrm**nknfmr**kslhsrcmfdkrwlllscnn**l
y*lrkssvyyi*rl*tkkmws*w*ll*rssnlr*wkwvyn**lfkkwylfkqin*klc*l
*---

---IPKENCEVCSKTLYCXTDNPCELSVCPDNKDSCITKPLNCDDDDSCTIDSCSPDTNC
THTRIAGCRAVPTTTGIAPHTHYCDYCHDTEICILIGDVPTCVPTSTTSSIPLTTVTTDI
ELVVTSGIYSTGHFTESGTTFGDKPSTTTSELVSTTSSTPPYYNLCDRVRCGKGLECYMI
DNKPECLPSNYQCMDCWDLLCHLQDLSCKMVLNPHFITDKYGQVCCKFIPTCIPR*ikf*
nyrna*lg

Frame C:
DGKSCVSSPKNCNDTSFCTIDSCNSPNGTCSHSFPDPKCVSCASTSCTTTDDCLVQVCSD
DGASCNSIPKNCDDKNPCTQDSCSNNGVCAYTPIPNCSICNSTFGCITTDLCQPMVCTDP
DLKCEIDQTLCNDDNFCTTDSCSGNGICAHTPVDSCLTCSKNIGCITVDKCNPQICSNDN
KSCITGDNGCDKGDKCSIASCESPAGNCKSTPVVCDDNDPCTIDSCNPADGTCVHQDINN
CAECGKLGCITSNPCQPVSCSITGTECNKTKISCDDKNHCTQDACSIKDGSCYHATINNC
IDCANQACITFDACKPKKCGADGNCYEDPVTCDDGNGCTIDSCSRNGTCSNKLIENCVSC
N---

---yqkkivkfaqklyivxlithvslvsvqiikihvspnl*ivmmmivvq*ilvvlipiv
lipvlqvveqfqqqle*hltltivtivmilkyvf*lvmfllvyqhqqhhqyh*qq*qqil
n*llhlvyiplaislkveplleinpvqprqn*yqqpplhllitifaie*davkv*nvi*l
iinlnvyhqitnvwtvgiyfvifkiylvkwf*ipisllinmvkfvvnsyqrvyqdklnsk
tiemhn*

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11419-1 (Contig-U11419-1Q)
/CSM_Contig/Contig-U11419-1Q.Seq.d
(1831 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11419-1 (Contig-U11419-1Q) /CSM_Contig/Conti... 3523 0.0
Contig-U11582-1 (Contig-U11582-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U12151-1 (Contig-U12151-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U12458-1 (Contig-U12458-1Q) /CSM_Contig/Conti... 40 0.008
Contig-U12062-1 (Contig-U12062-1Q) /CSM_Contig/Conti... 40 0.008
Contig-U14682-1 (Contig-U14682-1Q) /CSM_Contig/Conti... 38 0.033
Contig-U13205-1 (Contig-U13205-1Q) /CSM_Contig/Conti... 38 0.033
Contig-U12557-1 (Contig-U12557-1Q) /CSM_Contig/Conti... 38 0.033
Contig-U12482-1 (Contig-U12482-1Q) /CSM_Contig/Conti... 38 0.033
Contig-U11926-1 (Contig-U11926-1Q) /CSM_Contig/Conti... 38 0.033

>Contig-U11419-1 (Contig-U11419-1Q) /CSM_Contig/Contig-U11419-1Q.Seq.d
Length = 1831

Score = 3523 bits (1777), Expect = 0.0
Identities = 1824/1831 (99%)
Strand = Plus / Plus


Query: 1 cagatggaaaaagttgtgtttcatctccaaaaaattgtaatgataccagtttttgtacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagatggaaaaagttgtgtttcatctccaaaaaattgtaatgataccagtttttgtacta 60


Query: 61 ttgatagttgtaattcaccaaatggaacgtgttcacattcatttccagatcctaaatgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgatagttgtaattcaccaaatggaacgtgttcacattcatttccagatcctaaatgtg 120


Query: 121 tatcttgtgcatccacatcatgtactacaactgatgattgcttagttcaagtttgtagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatcttgtgcatccacatcatgtactacaactgatgattgcttagttcaagtttgtagtg 180


Query: 181 atgatggagccagttgtaattcaataccaaaaaattgtgatgacaaaaacccttgtacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgatggagccagttgtaattcaataccaaaaaattgtgatgacaaaaacccttgtacac 240


Query: 241 aagatagttgctcaaataatggagtttgtgcatacactcccattccaaattgttcaattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagatagttgctcaaataatggagtttgtgcatacactcccattccaaattgttcaattt 300


Query: 301 gtaacagtactttcggctgcattaccaccgatttatgtcaaccaatggtttgtacagatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtaacagtactttcggctgcattaccaccgatttatgtcaaccaatggtttgtacagatc 360


Query: 361 cagatcttaaatgtgagatagatcaaactctatgtaatgatgataacttttgtaccactg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagatcttaaatgtgagatagatcaaactctatgtaatgatgataacttttgtaccactg 420


Query: 421 atagttgctcaggaaatggtatttgtgcacacactcctgttgatagttgtttaacctgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atagttgctcaggaaatggtatttgtgcacacactcctgttgatagttgtttaacctgtt 480


Query: 481 caaaaaatattggttgtattactgtagataaatgtaatcctcagatctgttcaaatgata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caaaaaatattggttgtattactgtagataaatgtaatcctcagatctgttcaaatgata 540


Query: 541 ataaatcatgtatcaccggagataatgggtgtgataaaggtgataaatgttcaatagctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ataaatcatgtatcaccggagataatgggtgtgataaaggtgataaatgttcaatagctt 600


Query: 601 catgtgaatcgccagcaggtaattgtaaatcaactccagtagtttgtgatgataatgatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 catgtgaatcgccagcaggtaattgtaaatcaactccagtagtttgtgatgataatgatc 660


Query: 661 cttgtacaattgatagttgtaacccagcagatggaacttgtgtacatcaagatattaata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cttgtacaattgatagttgtaacccagcagatggaacttgtgtacatcaagatattaata 720


Query: 721 actgtgctgaatgtggtaaacttggatgtattacaagcaatccttgtcagccagtttctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 actgtgctgaatgtggtaaacttggatgtattacaagcaatccttgtcagccagtttctt 780


Query: 781 gttcaatcactggcacagaatgtaataaaacaaaaatttcatgcgatgataaaaatcatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gttcaatcactggcacagaatgtaataaaacaaaaatttcatgcgatgataaaaatcatt 840


Query: 841 gcactcaagatgcatgttcgataaaagatggctcttgttatcatgcaacaattaataatt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gcactcaagatgcatgttcgataaaagatggctcttgttatcatgcaacaattaataatt 900


Query: 901 gtattgattgcgcaaatcaagcgtgtattacatttgacgcttgtaaaccnnnnnnntgtg 960
||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 901 gtattgattgcgcaaatcaagcgtgtattacatttgacgcttgtaaaccaaaaaaatgtg 960


Query: 961 gagctgatggtaattgctatgaagatccagtaacctgcgatgatggaaatgggtgtacaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gagctgatggtaattgctatgaagatccagtaacctgcgatgatggaaatgggtgtacaa 1020


Query: 1021 ttgatagttgttcaagaaatggtacttgttcaaacaaattaattgaaaactgtgttagtt 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ttgatagttgttcaagaaatggtacttgttcaaacaaattaattgaaaactgtgttagtt 1080


Query: 1081 gtaatnnnnnnnnnntataccaaaagaaaattgtgaagtttgctcaaaaactttatattg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gtaatnnnnnnnnnntataccaaaagaaaattgtgaagtttgctcaaaaactttatattg 1140


Query: 1141 tanaactgataacccatgtgagcttagtgtctgtccagataataaagattcatgtatcac 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tanaactgataacccatgtgagcttagtgtctgtccagataataaagattcatgtatcac 1200


Query: 1201 caaacctttaaattgtgatgatgatgatagttgtacaatagattcttgtagtcctgatac 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 caaacctttaaattgtgatgatgatgatagttgtacaatagattcttgtagtcctgatac 1260


Query: 1261 caattgtactcatacccgtattgcaggttgtcgagcagttccaacaacaactggaatagc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 caattgtactcatacccgtattgcaggttgtcgagcagttccaacaacaactggaatagc 1320


Query: 1321 acctcacactcactattgtgactattgtcatgatactgaaatatgtattctaattggtga 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 acctcacactcactattgtgactattgtcatgatactgaaatatgtattctaattggtga 1380


Query: 1381 tgttcctacttgtgtaccaacatcaacaacatcatcaataccattaacaacagtaacaac 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 tgttcctacttgtgtaccaacatcaacaacatcatcaataccattaacaacagtaacaac 1440


Query: 1441 agatattgaattagttgttacatctggtatatattccactggccatttcactgaaagtgg 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 agatattgaattagttgttacatctggtatatattccactggccatttcactgaaagtgg 1500


Query: 1501 aaccacttttggagataaacccagtacaaccacgtcagaattagtatcaacaacctcctc 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 aaccacttttggagataaacccagtacaaccacgtcagaattagtatcaacaacctcctc 1560


Query: 1561 tacacctccttattacaatctttgcgatagagtaagatgcggtaaaggtttagaatgtta 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 tacacctccttattacaatctttgcgatagagtaagatgcggtaaaggtttagaatgtta 1620


Query: 1621 tatgattgataataaacctgaatgtctaccatcaaattaccaatgtatggactgttggga 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 tatgattgataataaacctgaatgtctaccatcaaattaccaatgtatggactgttggga 1680


Query: 1681 tttactttgtcatcttcaagatttatcttgtaaaatggttttaaatccccatttcattac 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 tttactttgtcatcttcaagatttatcttgtaaaatggttttaaatccccatttcattac 1740


Query: 1741 tgataaatatggtcaagtttgttgtaaattcataccaacgtgtataccaagataaattaa 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 tgataaatatggtcaagtttgttgtaaattcataccaacgtgtataccaagataaattaa 1800


Query: 1801 attctaaaactatagaaatgcataattagga 1831
|||||||||||||||||||||||||||||||
Sbjct: 1801 attctaaaactatagaaatgcataattagga 1831


>Contig-U11582-1 (Contig-U11582-1Q) /CSM_Contig/Contig-U11582-1Q.Seq.d
Length = 2674

Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 1014 tgtacaattgatagttgttcaag 1036
|||||||||||||||||||||||
Sbjct: 1477 tgtacaattgatagttgttcaag 1499


Score = 38.2 bits (19), Expect = 0.033
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 662 ttgtacaattgatagttgt 680
|||||||||||||||||||
Sbjct: 1476 ttgtacaattgatagttgt 1494


Score = 30.2 bits (15), Expect = 8.0
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 53 ttgtactattgatagttgt 71
|||||| ||||||||||||
Sbjct: 1476 ttgtacaattgatagttgt 1494


>Contig-U12151-1 (Contig-U12151-1Q) /CSM_Contig/Contig-U12151-1Q.Seq.d
Length = 2963

Score = 42.1 bits (21), Expect = 0.002
Identities = 27/29 (93%)
Strand = Plus / Plus


Query: 645 tgtgatgataatgatccttgtacaattga 673
|||||||||||| |||| |||||||||||
Sbjct: 2552 tgtgatgataataatccatgtacaattga 2580


Score = 38.2 bits (19), Expect = 0.033
Identities = 22/23 (95%)
Strand = Plus / Plus


Query: 815 aatttcatgcgatgataaaaatc 837
||||||||| |||||||||||||
Sbjct: 1174 aatttcatgtgatgataaaaatc 1196


Score = 30.2 bits (15), Expect = 8.0
Identities = 21/23 (91%)
Strand = Plus / Plus


Query: 645 tgtgatgataatgatccttgtac 667
|||||||||||| |||| |||||
Sbjct: 2335 tgtgatgataataatccatgtac 2357


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 22,388
Number of Sequences: 6905
Number of extensions: 22388
Number of successful extensions: 3465
Number of sequences better than 10.0: 338
length of query: 1831
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1815
effective length of database: 5,564,391
effective search space: 10099369665
effective search space used: 10099369665
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.24
Homology vs DNA
Query= Contig-U11419-1 (Contig-U11419-1Q) /CSM_Contig/Contig-U11419-1Q.Seq.d
(1831 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ365563) Dictyostelium discoideum cDNA clone:ddc35e21, 5' ... 1390 0.0 1
(BJ401592) Dictyostelium discoideum cDNA clone:dds23d20, 3' ... 1205 0.0 1
(AU034605) Dictyostelium discoideum slug cDNA, clone SLC611. 1124 0.0 1
(BJ391661) Dictyostelium discoideum cDNA clone:dds24b19, 5' ... 1122 0.0 1
(BJ335290) Dictyostelium discoideum cDNA clone:dda49l17, 5' ... 1045 0.0 2
(BJ353296) Dictyostelium discoideum cDNA clone:dda49l17, 3' ... 868 0.0 3
(BJ368245) Dictyostelium discoideum cDNA clone:ddc45l21, 5' ... 42 0.002 3
(X78948) D.minutum ecmB gene. 40 0.024 4
(BJ387094) Dictyostelium discoideum cDNA clone:dds12g07, 5' ... 36 0.044 3
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 44 0.054 12
(BJ359857) Dictyostelium discoideum cDNA clone:ddc3a06, 5' e... 42 0.084 2
(BJ387893) Dictyostelium discoideum cDNA clone:dds5m16, 5' e... 38 0.10 2
(BJ328434) Dictyostelium discoideum cDNA clone:dda28m04, 5' ... 42 0.11 2
(BJ333614) Dictyostelium discoideum cDNA clone:dda43i09, 5' ... 42 0.11 2
(AU061440) Dictyostelium discoideum slug cDNA, clone SLE266. 38 0.11 2
(BJ358865) Dictyostelium discoideum cDNA clone:ddc11p13, 5' ... 38 0.11 2
(BJ360059) Dictyostelium discoideum cDNA clone:ddc4c01, 5' e... 38 0.13 2
(BJ389254) Dictyostelium discoideum cDNA clone:dds18i02, 5' ... 38 0.13 2
(BJ387899) Dictyostelium discoideum cDNA clone:dds5o16, 5' e... 38 0.13 2
(BJ360425) Dictyostelium discoideum cDNA clone:ddc6f03, 5' e... 38 0.13 2
(BJ386959) Dictyostelium discoideum cDNA clone:dds11h17, 5' ... 38 0.14 2
(BJ361823) Dictyostelium discoideum cDNA clone:ddc18n19, 5' ... 38 0.14 2
(BJ368152) Dictyostelium discoideum cDNA clone:ddc45b15, 5' ... 34 0.21 4
(BJ355062) Dictyostelium discoideum cDNA clone:dda55k16, 3' ... 38 0.25 3
(BJ367884) Dictyostelium discoideum cDNA clone:ddc44k14, 5' ... 34 0.29 4
(AC187329) Canis Familiaris chromosome 18, clone XX-17G5, co... 50 0.30 1
(BJ368835) Dictyostelium discoideum cDNA clone:ddc48c10, 5' ... 34 0.35 4
(AC132794) Rattus norvegicus clone CH230-12A22, *** SEQUENCI... 48 1.2 1
(AC110646) Rattus norvegicus clone CH230-323G13, *** SEQUENC... 48 1.2 1
(AC109003) Rattus norvegicus clone CH230-266P19, WORKING DRA... 48 1.2 1
(AC180840) Strongylocentrotus purpuratus clone R3-3069P1, WO... 48 1.2 1
(AC180752) Strongylocentrotus purpuratus clone R3-3021P19, W... 48 1.2 1
(AC178239) Strongylocentrotus purpuratus clone R3-3086F16, W... 48 1.2 1
(AC176193) Strongylocentrotus purpuratus clone R3-3064A03, W... 48 1.2 1
(CL565695) OB__Ba0033J12.f OB__Ba Oryza brachyantha genomic ... 48 1.2 1
(EY336425) CAWY7679.rev CAWY Helobdella robusta Subtracted E... 48 1.2 1
(EY331409) CAWY4155.fwd CAWY Helobdella robusta Subtracted E... 48 1.2 1
(EY331408) CAWY4155.rev CAWY Helobdella robusta Subtracted E... 48 1.2 1
(CP000478) Syntrophobacter fumaroxidans MPOB, complete genome. 48 1.2 1
(BJ362093) Dictyostelium discoideum cDNA clone:ddc20l04, 5' ... 46 1.3 2
(BJ393183) Dictyostelium discoideum cDNA clone:dds30m11, 5' ... 34 3.0 3
(BJ393832) Dictyostelium discoideum cDNA clone:dds32e21, 5' ... 34 3.3 3
(AC162576) Bos taurus clone CH240-118N12, WORKING DRAFT SEQU... 46 4.7 1
(AC160169) Bos taurus clone CH240-83D1, WORKING DRAFT SEQUEN... 46 4.7 1
(AC141992) Rattus norvegicus clone CH230-77K14, *** SEQUENCI... 46 4.7 1
(AC136124) Rattus norvegicus clone CH230-257B2, WORKING DRAF... 46 4.7 1
(AC134702) Rattus norvegicus clone CH230-174M10, WORKING DRA... 46 4.7 1
(AC117062) Rattus norvegicus clone CH230-177D13, *** SEQUENC... 46 4.7 1
(AC106979) Rattus norvegicus clone CH230-205F12, WORKING DRA... 46 4.7 1
(AC097388) Rattus norvegicus clone CH230-8O5, WORKING DRAFT ... 46 4.7 1
(CU467008) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 4.7 1
(AC165578) Bos taurus clone CH240-170K15, WORKING DRAFT SEQU... 46 4.7 1
(AC163226) Bos taurus clone CH240-137B4, *** SEQUENCING IN P... 46 4.7 1
(DU250902) 1098538182408 CHORI-243 Ovis aries genomic clone ... 46 4.7 1
(EH012934) USDA-FP_185784 Lysiphlebus testaceipes adult whol... 46 4.7 1
(EH012804) USDA-FP_185668 Lysiphlebus testaceipes adult whol... 46 4.7 1
(EH009812) USDA-FP_182973 Lysiphlebus testaceipes adult whol... 46 4.7 1
(EG975267) GLL024_F05_019 Cyamopsis tetragonoloba (L.) Taub ... 46 4.7 1
(DN562796) 87602213 Sea Urchin primary mesenchyme cell cDNA ... 46 4.7 1
(CV233785) WS01212.B21_F23 PT-GT-FL-A-3 Populus trichocarpa ... 46 4.7 1
(BE100854) UI-R-BJ1-atx-a-10-0-UI.s1 UI-R-BJ1 Rattus norvegi... 46 4.7 1
(EY381876) CAXA3726.fwd CAXA Helobdella robusta Subtracted L... 46 4.7 1
(EY336947) CAWY8019.rev CAWY Helobdella robusta Subtracted E... 46 4.7 1
(EY305215) CAWX19244.fwd CAWX Helobdella robusta Primary Ear... 46 4.7 1
(EY367863) CAXA11480.fwd CAXA Helobdella robusta Subtracted ... 40 4.7 3
(EY384617) CAXA5245.rev CAXA Helobdella robusta Subtracted L... 44 4.8 2
(BJ401358) Dictyostelium discoideum cDNA clone:dds23b01, 3' ... 38 5.0 2
(AC100669) Mus musculus clone RP23-167J1, LOW-PASS SEQUENCE ... 40 6.2 3
(EY374046) CAXA14871.rev CAXA Helobdella robusta Subtracted ... 44 6.4 2
(BJ371376) Dictyostelium discoideum cDNA clone:ddc57b24, 5' ... 34 7.3 3
(DQ307240) Penaeus monodon microsatellite 8EG sequence. 42 7.5 2
(AC201644) Strongylocentrotus purpuratus clone R3-12J19, WOR... 32 8.3 2
(BJ390802) Dictyostelium discoideum cDNA clone:dds23d20, 5' ... 38 8.3 3
(BJ360148) Dictyostelium discoideum cDNA clone:ddc4h17, 5' e... 34 9.4 3
(BJ365655) Dictyostelium discoideum cDNA clone:ddc36j04, 5' ... 34 9.7 3
(AC174607) Solanum lycopersicum, complete sequence. 34 9.9 8

>(BJ365563) Dictyostelium discoideum cDNA clone:ddc35e21, 5' end,
single read.
Length = 701

Score = 1390 bits (701), Expect = 0.0
Identities = 701/701 (100%)
Strand = Plus / Plus


Query: 1 cagatggaaaaagttgtgtttcatctccaaaaaattgtaatgataccagtttttgtacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagatggaaaaagttgtgtttcatctccaaaaaattgtaatgataccagtttttgtacta 60


Query: 61 ttgatagttgtaattcaccaaatggaacgtgttcacattcatttccagatcctaaatgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgatagttgtaattcaccaaatggaacgtgttcacattcatttccagatcctaaatgtg 120


Query: 121 tatcttgtgcatccacatcatgtactacaactgatgattgcttagttcaagtttgtagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatcttgtgcatccacatcatgtactacaactgatgattgcttagttcaagtttgtagtg 180


Query: 181 atgatggagccagttgtaattcaataccaaaaaattgtgatgacaaaaacccttgtacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgatggagccagttgtaattcaataccaaaaaattgtgatgacaaaaacccttgtacac 240


Query: 241 aagatagttgctcaaataatggagtttgtgcatacactcccattccaaattgttcaattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagatagttgctcaaataatggagtttgtgcatacactcccattccaaattgttcaattt 300


Query: 301 gtaacagtactttcggctgcattaccaccgatttatgtcaaccaatggtttgtacagatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtaacagtactttcggctgcattaccaccgatttatgtcaaccaatggtttgtacagatc 360


Query: 361 cagatcttaaatgtgagatagatcaaactctatgtaatgatgataacttttgtaccactg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagatcttaaatgtgagatagatcaaactctatgtaatgatgataacttttgtaccactg 420


Query: 421 atagttgctcaggaaatggtatttgtgcacacactcctgttgatagttgtttaacctgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atagttgctcaggaaatggtatttgtgcacacactcctgttgatagttgtttaacctgtt 480


Query: 481 caaaaaatattggttgtattactgtagataaatgtaatcctcagatctgttcaaatgata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caaaaaatattggttgtattactgtagataaatgtaatcctcagatctgttcaaatgata 540


Query: 541 ataaatcatgtatcaccggagataatgggtgtgataaaggtgataaatgttcaatagctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ataaatcatgtatcaccggagataatgggtgtgataaaggtgataaatgttcaatagctt 600


Query: 601 catgtgaatcgccagcaggtaattgtaaatcaactccagtagtttgtgatgataatgatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 catgtgaatcgccagcaggtaattgtaaatcaactccagtagtttgtgatgataatgatc 660


Query: 661 cttgtacaattgatagttgtaacccagcagatggaacttgt 701
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cttgtacaattgatagttgtaacccagcagatggaacttgt 701

Score = 36.2 bits (18), Expect(3) = 0.34
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 1014 tgtacaattgatagttgt 1031
||||||||||||||||||
Sbjct: 663 tgtacaattgatagttgt 680

Score = 34.2 bits (17), Expect(3) = 0.34
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 662 ttgtacaattgatagttgtaa 682
|||||| ||||||||||||||
Sbjct: 53 ttgtactattgatagttgtaa 73

Score = 26.3 bits (13), Expect(3) = 0.34
Identities = 16/17 (94%)
Strand = Plus / Plus


Query: 207 ccaaaaaattgtgatga 223
|||||||||||| ||||
Sbjct: 27 ccaaaaaattgtaatga 43

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,988,735,708
Number of extensions: 112713558
Number of successful extensions: 9680626
Number of sequences better than 10.0: 78
Length of query: 1831
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1807
Effective length of database: 97,308,875,965
Effective search space: 175837138868755
Effective search space used: 175837138868755
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.30
Homology vs Protein
Query= Contig-U11419-1 (Contig-U11419-1Q) /CSM_Contig/Contig-U11419-1Q.Seq.d
(1831 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54C31) RecName: Full=Protein psiR; Flags: Precursor; 303 e-101
(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor; 266 2e-69
(P11976) RecName: Full=Prestalk protein; AltName: Full=Extracell... 208 6e-52
A26838(A26838)prestalk protein precursor - slime mold (Dictyoste... 205 4e-51
AC116984_103(AC116984|pid:none) Dictyostelium discoideum chromos... 180 2e-43
S44208(S44208) extracellular matrix protein B - Dictyostelium mi... 173 3e-42
A27020(A27020)DIF-induced prestalk pDd63 protein precursor - sli... 167 9e-40
AC117072_61(AC117072|pid:none) Dictyostelium discoideum chromoso... 164 8e-39
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor; 137 1e-30
(Q55FQ4) RecName: Full=Protein psiB; Flags: Precursor; 122 4e-26
(Q557E9) RecName: Full=Protein psiG; Flags: Precursor; &AC11568... 121 1e-25
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor; 118 6e-25
(Q94494) RecName: Full=Protein psiH; Flags: Precursor; &U67940_... 117 1e-24
(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor; &AC11695... 114 1e-23
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor; 109 4e-22
(Q54P69) RecName: Full=Protein psiM; Flags: Precursor; 94 2e-17
X56160_1(X56160|pid:none) Human mRNA for tenascin. 79 4e-13
AB210038_1(AB210038|pid:none) Homo sapiens mRNA for TNC variant ... 78 9e-13
(P24821) RecName: Full=Tenascin; Short=TN; AltName: Ful... 78 9e-13
AK304015_1(AK304015|pid:none) Homo sapiens cDNA FLJ60213 complet... 78 9e-13
BC151843_1(BC151843|pid:none) Homo sapiens tenascin C, mRNA (cDN... 78 1e-12
CP001131_2828(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 77 2e-12
(Q1ZXC5) RecName: Full=Protein psiC; Flags: Precursor; 77 2e-12
CP000113_6723(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 77 2e-12
AP008215_740(AP008215|pid:none) Oryza sativa (japonica cultivar-... 77 3e-12
AP005419_8(AP005419|pid:none) Oryza sativa Japonica Group genomi... 77 3e-12
FJ501956_1(FJ501956|pid:none) Oryza sativa Indica Group keratin ... 77 3e-12
BX510920_1(BX510920|pid:none) Zebrafish DNA sequence from clone ... 76 4e-12
EU596506_1(EU596506|pid:none) Rattus norvegicus tenascin C (Tnc)... 76 4e-12
CT025750_1(CT025750|pid:none) Zebrafish DNA sequence from clone ... 76 5e-12
(Q54FD8) RecName: Full=Protein psiD; Flags: Precursor; 76 5e-12
AY262832_1(AY262832|pid:none) Solenopsis invicta vitellogenin re... 75 8e-12
CP000251_2747(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 75 1e-11
AJ133651_1(AJ133651|pid:none) Trichoderma harzianum cmp1 gene. 74 1e-11
M61131_1(M61131|pid:none) T.brucei acidic integral membrane prot... 74 2e-11
M16152_1(M16152|pid:none) Drosophila melanogaster Notch growth f... 74 2e-11
AM746676_5937(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 73 4e-11
AL035436_2(AL035436|pid:none) Drosophila melanogaster cosmid clo... 73 4e-11
(Q80YX1) RecName: Full=Tenascin; Short=TN; AltName: Ful... 72 5e-11
AL732556_3(AL732556|pid:none) Mouse DNA sequence from clone RP24... 72 5e-11
AY265357_1(AY265357|pid:none) Homo sapiens glycoprotein receptor... 72 5e-11
AL732556_1(AL732556|pid:none) Mouse DNA sequence from clone RP24... 72 5e-11
(A2ARV4) RecName: Full=Low-density lipoprotein receptor-related ... 72 7e-11
BC151354_1(BC151354|pid:none) Bos taurus latent transforming gro... 71 1e-10
CP000769_2725(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 71 1e-10
AY265358_1(AY265358|pid:none) Homo sapiens glycoprotein receptor... 70 2e-10
AC007556_2(AC007556|pid:none) Homo sapiens BAC clone RP11-18C9 f... 70 2e-10
(P98164) RecName: Full=Low-density lipoprotein receptor-related ... 70 2e-10
A35844(A35844)Xotch protein - African clawed frog 70 3e-10
(P98158) RecName: Full=Low-density lipoprotein receptor-related ... 70 3e-10
AC115598_37(AC115598|pid:none) Dictyostelium discoideum chromoso... 69 4e-10
AB041857_1(AB041857|pid:none) Ciona intestinalis mRNA for Ci-MET... 69 4e-10
CP000769_2860(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 69 6e-10
(P21783) RecName: Full=Neurogenic locus notch protein homolog; ... 69 6e-10
AJ291489_1(AJ291489|pid:none) Paracentrotus lividus mRNA for fib... 69 6e-10
(Q25464) RecName: Full=Adhesive plaque matrix protein 2; AltName... 69 7e-10
AB001327_1(AB001327|pid:none) Halocynthia roretzi mRNA for HrNot... 69 7e-10
AE014296_1363(AE014296|pid:none) Drosophila melanogaster chromos... 69 7e-10
BC084953_1(BC084953|pid:none) Xenopus laevis X-Serrate-1 protein... 69 7e-10
U20217_1(U20217|pid:none) Mus musculus fibrillin-2 mRNA, partial... 69 7e-10
U35363_1(U35363|pid:none) Bos taurus latent TGF-beta binding pro... 69 7e-10
BT032860_1(BT032860|pid:none) Drosophila melanogaster RE24628 fu... 69 7e-10
AB010266_2(AB010266|pid:none) Mus musculus Creb-rp, Tnx, Cyp21 g... 68 1e-09
S82451_1(S82451|pid:none) latent transforming growth factor-beta... 68 1e-09
BC140725_1(BC140725|pid:none) Homo sapiens keratin associated pr... 68 1e-09
BC078659_1(BC078659|pid:none) Homo sapiens latent transforming g... 68 1e-09
AF135060_1(AF135060|pid:none) Rattus norvegicus fibrillin-2 mRNA... 68 1e-09
AB209865_1(AB209865|pid:none) Homo sapiens mRNA for latent trans... 68 1e-09
DQ917572_1(DQ917572|pid:none) Parhyale hawaiensis notch protein ... 67 2e-09
AY805407_1(AY805407|pid:none) Danio rerio notch1b mRNA, complete... 67 2e-09
M33753_1(M33753|pid:none) D.melanogaster crumbs protein mRNA, co... 67 2e-09
(P10040) RecName: Full=Protein crumbs; AltName: Full=95F; Flags:... 67 2e-09
AK220196_1(AK220196|pid:none) Mus musculus mRNA for mKIAA4226 pr... 67 2e-09
CT033758_4(CT033758|pid:none) Mouse DNA sequence from clone RP23... 67 3e-09
EU974210_1(EU974210|pid:none) Zea mays clone 442907 keratin-asso... 67 3e-09
BC094612_1(BC094612|pid:none) Mus musculus latent transforming g... 67 3e-09
(Q8CIR0) RecName: Full=Latent-transforming growth factor beta-bi... 67 3e-09
AC116956_34(AC116956|pid:none) Dictyostelium discoideum chromoso... 66 4e-09
AM746676_2497(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 66 4e-09
(O35806) RecName: Full=Latent-transforming growth factor beta-bi... 66 4e-09
Y12539_1(Y12539|pid:none) Branchiostoma floridae mRNA for putati... 66 5e-09
AX647605_1(AX647605|pid:none) Sequence 1797 from Patent EP1270724. 66 5e-09
AB073427_1(AB073427|pid:none) Ciona savignyi mRNA for Delta, com... 66 5e-09
AL592545_3(AL592545|pid:none) Mouse DNA sequence from clone RP23... 66 5e-09
U03272_1(U03272|pid:none) Human fibrillin-2 mRNA, complete cds. 65 6e-09
AB209735_1(AB209735|pid:none) Homo sapiens mRNA for fibrillin 2 ... 65 6e-09
A54105(A54105;S17063;S31101)fibrillin-2 precursor - human 65 6e-09
(Q61555) RecName: Full=Fibrillin-2; Flags: Precursor; &A57278(A... 65 6e-09
AF007248_1(AF007248|pid:none) Mus musculus mutant fibrillin-1 (F... 65 8e-09
AK124524_1(AK124524|pid:none) Homo sapiens cDNA FLJ42533 fis, cl... 65 8e-09
(P46531) RecName: Full=Neurogenic locus notch homolog protein 1;... 65 8e-09
AL844547_6(AL844547|pid:none) Mouse DNA sequence from clone RP23... 65 8e-09
AB325965_1(AB325965|pid:none) Sorogena stoianovitchae agf6 mRNA,... 65 1e-08
EU854565_1(EU854565|pid:none) Danio rerio fibrillin 4 (fbn4) mRN... 65 1e-08
U28735_10(U28735|pid:none) Caenorhabditis elegans cosmid F48E3, ... 65 1e-08
(A2VCU8) RecName: Full=Protein kinase C-binding protein NELL2; A... 65 1e-08
DQ310728_1(DQ310728|pid:none) Xenopus laevis fibrillin mRNA, par... 65 1e-08
AL034559_42(AL034559|pid:none) Plasmodium falciparum MAL3P7, com... 65 1e-08
(Q9NS15) RecName: Full=Latent-transforming growth factor beta-bi... 64 1e-08
EU972808_1(EU972808|pid:none) Zea mays clone 388422 unknown mRNA. 64 1e-08
AK024477_1(AK024477|pid:none) Homo sapiens mRNA for FLJ00070 pro... 64 1e-08
AB100603_1(AB100603|pid:none) Mus musculus Notch1 gene for trans... 64 1e-08
BC008761_1(BC008761|pid:none) Homo sapiens latent transforming g... 64 1e-08
AB100603_2(AB100603|pid:none) Mus musculus Notch1 gene for trans... 64 1e-08
AF135960_1(AF135960|pid:none) Homo sapiens latent transforming g... 64 1e-08
FJ222591_1(FJ222591|pid:none) Periplaneta americana Notch protei... 64 1e-08
AF508809_1(AF508809|pid:none) Mus musculus notch 1 protein mRNA,... 64 1e-08
AC116963_25(AC116963|pid:none) Dictyostelium discoideum chromoso... 64 2e-08
DQ234084_1(DQ234084|pid:none) Paramecium tetraurelia A51 surface... 64 2e-08
DQ096731_1(DQ096731|pid:none) Danio rerio tenascin-C (TNC) mRNA,... 64 2e-08
L22431_1(L22431|pid:none) Human very low density lipoprotein rec... 64 2e-08
AM502222_18(AM502222|pid:none) Leishmania infantum chromosome 4. 64 2e-08
X08030_1(X08030|pid:none) Chicken mRNA fragment for tenascin (cT... 64 2e-08
(P41951) RecName: Full=Prion-like-(Q/N-rich) domain-bearing prot... 64 2e-08
AL450467_2(AL450467|pid:none) Human DNA sequence from clone RP11... 64 2e-08
(P98155) RecName: Full=Very low-density lipoprotein receptor; ... 64 2e-08
AB208822_1(AB208822|pid:none) Homo sapiens mRNA for Very low-den... 64 2e-08
BC163556_1(BC163556|pid:none) Danio rerio tenascin C, mRNA (cDNA... 63 3e-08
AY901988_1(AY901988|pid:none) Xenopus laevis proprotein converta... 63 3e-08
FJ039902_1(FJ039902|pid:none) Triticum aestivum DEP1 (DEP1) mRNA... 63 3e-08
AK302554_1(AK302554|pid:none) Homo sapiens cDNA FLJ51576 complet... 63 4e-08
(P78504) RecName: Full=Protein jagged-1; Short=Jagged1;... 63 4e-08
AK131126_1(AK131126|pid:none) Mus musculus premature mRNA for mF... 63 4e-08
AK312722_1(AK312722|pid:none) Homo sapiens cDNA, FLJ93126, highl... 63 4e-08
(Q7ZXL5) RecName: Full=Protein kinase C-binding protein NELL2; A... 63 4e-08
BC172642_1(BC172642|pid:none) Synthetic construct Mus musculus c... 63 4e-08
L33862_1(L33862|pid:none) Sea urchin fibropellin III mRNA, 3' end. 63 4e-08
AF135059_1(AF135059|pid:none) Rattus norvegicus fibrillin-1 mRNA... 63 4e-08
AM746676_4565(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 63 4e-08
BC168401_1(BC168401|pid:none) Synthetic construct Mus musculus c... 63 4e-08
L33417_1(L33417|pid:none) Mus musculus very low density lipoprot... 63 4e-08
Z98877_13(Z98877|pid:none) Caenorhabditis elegans YAC Y69H2, com... 63 4e-08
AM746676_2058(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 63 4e-08
(Q01705) RecName: Full=Neurogenic locus notch homolog protein 1;... 63 4e-08
U61276_1(U61276|pid:none) Human transmembrane protein Jagged 1 (... 63 4e-08
BC098393_1(BC098393|pid:none) Homo sapiens jagged 1 (Alagille sy... 63 4e-08
AK298858_1(AK298858|pid:none) Homo sapiens cDNA FLJ55349 complet... 62 5e-08
BX004856_1(BX004856|pid:none) Zebrafish DNA sequence from clone ... 62 5e-08
A56136(A56136)jagged protein precursor - rat 62 5e-08
AL845369_7(AL845369|pid:none) Zebrafish DNA sequence from clone ... 62 5e-08
I48952(I48952;S48217) VLDL receptor precursor, long splice form ... 62 5e-08
AK170264_1(AK170264|pid:none) Mus musculus NOD-derived CD11c +ve... 62 5e-08
AL389894_18(AL389894|pid:none) Leishmania major Friedlin chromos... 62 5e-08
BC019207_1(BC019207|pid:none) Mus musculus low density lipoprote... 62 5e-08
AB292627_1(AB292627|pid:none) Lethenteron japonicum LjNotchA mRN... 62 5e-08
BC013622_1(BC013622|pid:none) Mus musculus very low density lipo... 62 5e-08
(P98156) RecName: Full=Very low-density lipoprotein receptor; ... 62 5e-08
Z98877_8(Z98877|pid:none) Caenorhabditis elegans YAC Y69H2, comp... 62 7e-08
AM746676_8749(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 62 7e-08
AF308602_1(AF308602|pid:none) Homo sapiens NOTCH 1 (N1) mRNA, co... 62 7e-08
(Q61554) RecName: Full=Fibrillin-1; Flags: Precursor; &A55624(A... 62 7e-08
EU955480_1(EU955480|pid:none) Zea mays clone 1534022 unknown mRNA. 62 7e-08
AK299351_1(AK299351|pid:none) Homo sapiens cDNA FLJ59398 complet... 62 7e-08
(Q9QXX0) RecName: Full=Protein jagged-1; Short=Jagged1;... 62 7e-08
(P35953) RecName: Full=Very low-density lipoprotein receptor; ... 62 9e-08
AY540953_1(AY540953|pid:none) Strongylocentrotus purpuratus prot... 62 9e-08
S18188(S18188)notch protein homolog - rat 62 9e-08
(P35951) RecName: Full=Low-density lipoprotein receptor; ... 62 9e-08
AF355595_1(AF355595|pid:none) Aedes aegypti lipophorin receptor ... 62 9e-08
L36118_1(L36118|pid:none) Chiloscyllium plagiosum low-density li... 62 9e-08
AY348869_1(AY348869|pid:none) Aedes aegypti lipophorin receptor ... 62 9e-08
AJ748821_1(AJ748821|pid:none) Homo sapiens mRNA for crumbs homol... 61 1e-07
FJ222590_1(FJ222590|pid:none) Periplaneta americana Delta protei... 61 1e-07
AY901986_1(AY901986|pid:none) Xenopus laevis proprotein converta... 61 1e-07
AY901987_1(AY901987|pid:none) Xenopus laevis proprotein converta... 61 1e-07
(Q61810) RecName: Full=Latent-transforming growth factor beta-bi... 61 1e-07
(P82279) RecName: Full=Crumbs homolog 1; Flags: Precursor; &AL1... 61 1e-07
AF501275_1(AF501275|pid:none) Entamoeba histolytica clone C3 Gal... 61 1e-07
AF375477_1(AF375477|pid:none) Danio rerio granulin-A precursor, ... 61 1e-07
(P17053) RecName: Full=G surface protein, allelic form 168; Flag... 61 1e-07
AC115592_21(AC115592|pid:none) Dictyostelium discoideum chromoso... 61 1e-07
AF154671_1(AF154671|pid:none) Homo sapiens CRB1 mRNA, complete c... 61 1e-07
AM270078_56(AM270078|pid:none) Aspergillus niger contig An04c017... 61 1e-07
AB095016_1(AB095016|pid:none) Cynops pyrrhogaster Notch-1 mRNA f... 61 1e-07
AK299368_1(AK299368|pid:none) Homo sapiens cDNA FLJ61360 complet... 61 1e-07
AY553633_1(AY553633|pid:none) Paramecium primaurelia surface ant... 61 1e-07
AM502222_19(AM502222|pid:none) Leishmania infantum chromosome 4. 61 2e-07
C42125(C42125)trophozoite cysteine-rich surface antigen 72 - Gia... 61 2e-07
(P35555) RecName: Full=Fibrillin-1; Flags: Precursor; &L13923_1... 61 2e-07
X63556_1(X63556|pid:none) H.sapiens mRNA for fibrillin. 61 2e-07
AF159157_1(AF159157|pid:none) Hydra vulgaris head-activator bind... 61 2e-07
AK304737_1(AK304737|pid:none) Homo sapiens cDNA FLJ61597 partial... 61 2e-07
CR760336_1(CR760336|pid:none) Xenopus tropicalis finished cDNA, ... 60 2e-07
FJ039903_1(FJ039903|pid:none) Hordeum vulgare DEP1 (DEP1) mRNA, ... 60 3e-07
AY331707_1(AY331707|pid:none) Crassostrea virginica metallothion... 60 3e-07
T16642(T16642) hypothetical protein R01H2.3 - Caenorhabditis ele... 60 3e-07
AB072758_1(AB072758|pid:none) Macaca fascicularis testis cDNA cl... 60 3e-07
AC116963_42(AC116963|pid:none) Dictyostelium discoideum chromoso... 60 3e-07
BC104354_1(BC104354|pid:none) Mus musculus predicted gene, ENSMU... 60 3e-07
(O08999) RecName: Full=Latent-transforming growth factor beta-bi... 60 3e-07
AF195418_1(AF195418|pid:none) Mus musculus ODZ3 (Odz3) mRNA, par... 60 3e-07
AL389894_19(AL389894|pid:none) Leishmania major Friedlin chromos... 59 4e-07
CR352252_1(CR352252|pid:none) Zebrafish DNA sequence from clone ... 59 4e-07
AB006906_1(AB006906|pid:none) Xenopus laevis mRNA for vitellogen... 59 6e-07
BX537264_1(BX537264|pid:none) Zebrafish DNA sequence from clone ... 59 6e-07
AB201473_1(AB201473|pid:none) Bombyx mori LpR3 mRNA for lipophor... 59 6e-07
CT009745_1(CT009745|pid:none) Zebrafish DNA sequence from clone ... 59 6e-07
(P46530) RecName: Full=Neurogenic locus notch homolog protein 1;... 59 8e-07
AY845260_1(AY845260|pid:none) Mytilus edulis clone 2 foot protei... 59 8e-07
DQ812528_1(DQ812528|pid:none) Spironucleus barkhanus isolate Sp1... 59 8e-07
AL606536_6(AL606536|pid:none) Mouse DNA sequence from clone RP23... 59 8e-07
AB210365_1(AB210365|pid:none) Ciona intestinalis mRNA for delta ... 59 8e-07
EU152252_1(EU152252|pid:none) Hydra vulgaris notch mRNA, complet... 58 1e-06
AL590997_30(AL590997|pid:none) Mouse DNA sequence from clone RP2... 58 1e-06
(P98157) RecName: Full=Low-density lipoprotein receptor-related ... 58 1e-06
AE014297_4006(AE014297|pid:none) Drosophila melanogaster chromos... 58 1e-06
AF074902_1(AF074902|pid:none) Caenorhabditis elegans laminin alp... 58 1e-06
BC170293_1(BC170293|pid:none) Xenopus laevis a disintegrin and m... 58 1e-06
BC149826_1(BC149826|pid:none) Bos taurus keratin associated prot... 58 1e-06
AF016537_1(AF016537|pid:none) Bos taurus very low density lipopr... 58 1e-06
AF065168_1(AF065168|pid:none) Giardia intestinalis variant-speci... 58 1e-06
(P10079) RecName: Full=Fibropellin-1; AltName: Full=Fibropellin-... 58 1e-06
A23475(A23475)G surface protein - Paramecium primaurelia 58 1e-06
L08692_2(L08692|pid:none) Strongylocentrotus purpuratus fibropel... 58 1e-06
(Q04721) RecName: Full=Neurogenic locus notch homolog protein 2;... 58 1e-06
AE014297_4009(AE014297|pid:none) Drosophila melanogaster chromos... 58 1e-06
BT045323_1(BT045323|pid:none) Salmo salar clone ssal-rgf-518-160... 58 1e-06
AF308601_1(AF308601|pid:none) Homo sapiens NOTCH 2 (N2) mRNA, co... 58 1e-06
AX357059_1(AX357059|pid:none) Sequence 21 from Patent EP1175909.... 58 1e-06
F87908(F87908;E87908) protein T22A3.8 [imported] - Caenorhabditi... 58 1e-06
AF032382_1(AF032382|pid:none) Xenopus laevis metalloprotease-dis... 58 1e-06
AF406641_1(AF406641|pid:none) Mus musculus crumbs-like protein 1... 58 1e-06
FM209056_1(FM209056|pid:none) Homo sapiens mRNA for Eyes shut ho... 57 2e-06
(P60409) RecName: Full=Keratin-associated protein 10-7; AltName:... 57 2e-06
A49175(A49175;PH1570;S32113) Motch B protein - mouse (fragment) ... 57 2e-06
BT023499_1(BT023499|pid:none) Drosophila melanogaster LD34134 fu... 57 2e-06
EU183309_1(EU183309|pid:none) Chlamys farreri Kazal-type serine ... 57 2e-06
(Q9UMG7) RecName: Full=Tenascin-X; Short=TN-X; AltName:... 57 2e-06
AF288451_1(AF288451|pid:none) Xenopus laevis LTBP-1S protein mRN... 57 2e-06
QRXLL2(B40388)LDL receptor 2 precursor - African clawed frog 57 2e-06
AL049547_2(AL049547|pid:none) Human DNA sequence from clone RP1-... 57 2e-06
AL645922_24(AL645922|pid:none) Human DNA sequence from clone XXb... 57 2e-06
EF634346_1(EF634346|pid:none) Lehmannia valentiana matrilin-like... 57 2e-06
AK095637_1(AK095637|pid:none) Homo sapiens cDNA FLJ38318 fis, cl... 57 2e-06
X71923_1(X71923|pid:none) H.sapiens XB gene for tenascin-X, exon... 57 2e-06
AM746676_1040(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 57 2e-06
AB177802_1(AB177802|pid:none) Homo sapiens FBN1 gene for fibrill... 57 2e-06
L40459_1(L40459|pid:none) Mus musculus latent transforming growt... 57 2e-06
U13646_1(U13646|pid:none) Caenorhabditis elegans cosmid ZK783, c... 57 3e-06
AM920429_155(AM920429|pid:none) Penicillium chrysogenum Wisconsi... 57 3e-06
AB076354_1(AB076354|pid:none) Homo sapiens KRTAP18.7 mRNA for ke... 57 3e-06
AC004663_1(AC004663|pid:none) Homo sapiens chromosome 19, cosmid... 57 3e-06
D87558_1(D87558|pid:none) Gallus gallus mRNA for C-Serrate-2, pa... 57 3e-06
AB209447_1(AB209447|pid:none) Homo sapiens mRNA for Notch homolo... 57 3e-06
T34513(T34513)hypothetical protein ZK783.1 - Caenorhabditis eleg... 57 3e-06
CR861463_1(CR861463|pid:none) Pongo abelii mRNA; cDNA DKFZp459E2... 57 3e-06
DQ236243_1(DQ236243|pid:none) Chlamys farreri serine protease in... 57 3e-06
T29764(T29764)hypothetical protein T21E3.3 - Caenorhabditis eleg... 56 4e-06
AY627686_1(AY627686|pid:none) Didelphis virginiana megalin mRNA,... 56 4e-06
AC008273_1(AC008273|pid:none) Homo sapiens BAC clone RP11-150O2 ... 56 4e-06
AK295125_1(AK295125|pid:none) Homo sapiens cDNA FLJ56077 complet... 56 4e-06
AJ536342_1(AJ536342|pid:none) Glomeris marginata partial mRNA fo... 56 4e-06
AK316058_1(AK316058|pid:none) Homo sapiens cDNA, FLJ78957 comple... 56 4e-06
AM176438_1(AM176438|pid:none) Cyathea arborea chloroplast partia... 56 4e-06
AF029779_1(AF029779|pid:none) Homo sapiens hJAG2.del-E6 (JAG2) m... 56 4e-06
AK289553_1(AK289553|pid:none) Homo sapiens cDNA FLJ76207 complet... 56 4e-06
AX647115_1(AX647115|pid:none) Sequence 1307 from Patent EP1270724. 56 4e-06
AF236019_1(AF236019|pid:none) Giardia intestinalis isolate Ad-1 ... 56 4e-06
(Q5R3Z7) RecName: Full=Protein kinase C-binding protein NELL2; A... 56 5e-06
AF374376_24(AF374376|pid:none) Oikopleura dioica clone BAC clone... 56 5e-06
AF369477_1(AF369477|pid:none) Mus musculus strain 129P3/J lipopr... 56 5e-06
T28674(T28674) alpha-51D-immobilization antigen - Paramecium tet... 56 5e-06
(P60411) RecName: Full=Keratin-associated protein 10-9; AltName:... 56 5e-06
AF514281_1(AF514281|pid:none) Oreochromis aureus vitellogenin re... 56 5e-06
(Q9NZR2) RecName: Full=Low-density lipoprotein receptor-related ... 56 5e-06
AL773560_5(AL773560|pid:none) Pig DNA sequence from clone PigI-5... 56 5e-06
(Q07954) RecName: Full=Prolow-density lipoprotein receptor-relat... 56 5e-06
DQ900937_1(DQ900937|pid:none) Ciona intestinalis gamma-carboxygl... 56 5e-06
CP001131_1246(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 56 5e-06
BC091093_1(BC091093|pid:none) Xenopus tropicalis GRN protein, mR... 56 5e-06
(Q91ZX7) RecName: Full=Prolow-density lipoprotein receptor-relat... 56 5e-06
S25111(S25111;S32554) alpha-2-macroglobulin receptor precursor -... 56 5e-06
(O57409) RecName: Full=Delta-like protein B; Short=Delt... 56 5e-06
BT011327_1(BT011327|pid:none) Drosophila melanogaster SD22390 fu... 56 5e-06
BC035009_1(BC035009|pid:none) Homo sapiens delta/notch-like EGF ... 56 5e-06
Y14330_1(Y14330|pid:none) Homo sapiens partial mRNA for jagged2 ... 56 5e-06
AF298860_1(AF298860|pid:none) Giardia intestinalis variant-speci... 55 6e-06
(Q6L8H2) RecName: Full=Keratin-associated protein 5-3; AltName: ... 55 6e-06
AM494941_66(AM494941|pid:none) Leishmania braziliensis chromosom... 55 6e-06
AM050637_1(AM050637|pid:none) Blattella germanica mRNA for vitel... 55 6e-06
(P60331) RecName: Full=Keratin-associated protein 10-1; AltName:... 55 6e-06
AB255883_1(AB255883|pid:none) Rhyparobia maderae VgR mRNA for vi... 55 6e-06
X96557_1(X96557|pid:none) P.tetraurlia epsilon-51D gene. 55 6e-06
(A6QR11) RecName: Full=Protein kinase C-binding protein NELL2; A... 55 8e-06
BC170345_1(BC170345|pid:none) Xenopus laevis low density lipopro... 55 8e-06
(Q9P273) RecName: Full=Teneurin-3; Short=Ten-3; AltName... 55 8e-06
(Q9R0B6) RecName: Full=Laminin subunit gamma-3; AltName: Full=La... 55 8e-06
AM746676_392(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 55 8e-06
A57293(A57293;A60487)latent transforming growth factor beta-bind... 55 8e-06
AK168688_1(AK168688|pid:none) Mus musculus 17 days embryo stomac... 55 8e-06
AK080869_1(AK080869|pid:none) Mus musculus 4 days neonate male a... 55 8e-06
AL590997_31(AL590997|pid:none) Mouse DNA sequence from clone RP2... 55 8e-06
(Q62220) RecName: Full=Keratin-associated protein 5-4; AltName: ... 55 8e-06
AK159361_1(AK159361|pid:none) Mus musculus osteoclast-like cell ... 55 8e-06
(Q99087) RecName: Full=Low-density lipoprotein receptor 1; ... 55 1e-05
AF003521_1(AF003521|pid:none) Homo sapiens Jagged 2 mRNA, comple... 55 1e-05
AB154832_1(AB154832|pid:none) Halocynthia roretzi HrITGB2 mRNA f... 55 1e-05
AM746676_6052(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 55 1e-05
(P60370) RecName: Full=Keratin-associated protein 10-5; AltName:... 55 1e-05
T25933(T25933) hypothetical protein W02C12.1 - Caenorhabditis el... 55 1e-05
CP000113_1974(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 55 1e-05
QRXLL1(A40388)LDL receptor 1 precursor - African clawed frog 55 1e-05
DQ314737_1(DQ314737|pid:none) Danio rerio crumbs-like protein 2b... 55 1e-05
AF029778_1(AF029778|pid:none) Homo sapiens Jagged2 (JAG2) mRNA, ... 55 1e-05
AB076352_1(AB076352|pid:none) Homo sapiens KRTAP18.5 mRNA for ke... 55 1e-05
AP007155_961(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 55 1e-05
AF020201_1(AF020201|pid:none) Homo sapiens Jagged 2 mRNA, comple... 55 1e-05
BC167592_1(BC167592|pid:none) Xenopus tropicalis hypothetical pr... 54 1e-05
T16859(T16859)hypothetical protein T13C2.5 - Caenorhabditis eleg... 54 1e-05
DQ482581_1(DQ482581|pid:none) Galleria mellonella lipophorin rec... 54 1e-05
EU024890_1(EU024890|pid:none) Penaeus monodon vitellogenin recep... 54 1e-05
AM746676_4695(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 54 1e-05
AY901989_1(AY901989|pid:none) Xenopus laevis proprotein converta... 54 1e-05
D85463_1(D85463|pid:none) Mus musculus mRNA for apolipoprotein E... 54 1e-05
(Q924X6) RecName: Full=Low-density lipoprotein receptor-related ... 54 1e-05
AK299277_1(AK299277|pid:none) Homo sapiens cDNA FLJ53170 complet... 54 1e-05
AL805948_1(AL805948|pid:none) Mouse DNA sequence from clone RP23... 54 1e-05
(Q9JI18) RecName: Full=Low-density lipoprotein receptor-related ... 54 1e-05
BT045135_1(BT045135|pid:none) Salmo salar clone ssal-rgf-513-057... 49 2e-05
EF133884_1(EF133884|pid:none) Alexandrium fundyense strain GT-CA... 54 2e-05
BC069674_1(BC069674|pid:none) Homo sapiens NEL-like 1 (chicken),... 54 2e-05
AK302826_1(AK302826|pid:none) Homo sapiens cDNA FLJ54394 complet... 54 2e-05
AE014134_1265(AE014134|pid:none) Drosophila melanogaster chromos... 54 2e-05
AK295005_1(AK295005|pid:none) Homo sapiens cDNA FLJ61253 complet... 54 2e-05
AF135253_1(AF135253|pid:none) Mus musculus fibulin-2 (Fbln2) gen... 54 2e-05
(P37889) RecName: Full=Fibulin-2; Short=FIBL-2; Flags: ... 54 2e-05
AM746676_988(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 54 2e-05
AY007596_1(AY007596|pid:none) Giardia intestinalis variant-speci... 54 2e-05
(Q92832) RecName: Full=Protein kinase C-binding protein NELL1; A... 54 2e-05
(Q701N2) RecName: Full=Keratin-associated protein 5-5; AltName: ... 54 2e-05
AB031297_1(AB031297|pid:none) Sarcophaga peregrina mRNA for 120-... 54 2e-05
AE014297_4001(AE014297|pid:none) Drosophila melanogaster chromos... 54 2e-05
AB177798_1(AB177798|pid:none) Homo sapiens FBN3 gene for fibrill... 54 2e-05
U28735_9(U28735|pid:none) Caenorhabditis elegans cosmid F48E3, c... 54 2e-05
AM746676_3301(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 54 2e-05
AB177799_1(AB177799|pid:none) Homo sapiens FBN3 gene for fibrill... 54 2e-05
AB384635_1(AB384635|pid:none) Synthetic construct DNA, clone: pF... 54 2e-05
BC104355_1(BC104355|pid:none) Mus musculus keratin associated pr... 54 2e-05
CU138540_8(CU138540|pid:none) Zebrafish DNA sequence from clone ... 54 2e-05
(Q75N90) RecName: Full=Fibrillin-3; Flags: Precursor; &AY165863... 54 2e-05
CP001131_3213(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 54 2e-05
(Q9IAT6) RecName: Full=Delta-like protein C; Short=Delt... 54 2e-05
(P13508) RecName: Full=Protein glp-1; Flags: Precursor; &A32901... 54 2e-05
(Q9WTS6) RecName: Full=Teneurin-3; Short=Ten-3; AltName... 54 2e-05
AE014297_4000(AE014297|pid:none) Drosophila melanogaster chromos... 54 2e-05
AM055942_182(AM055942|pid:none) Toxoplasma gondii RH, genomic DN... 54 2e-05
(P35950) RecName: Full=Low-density lipoprotein receptor; ... 53 3e-05
(Q99088) RecName: Full=Low-density lipoprotein receptor 2; ... 53 3e-05
AB209498_1(AB209498|pid:none) Homo sapiens mRNA for low density ... 53 3e-05
AE014297_3999(AE014297|pid:none) Drosophila melanogaster chromos... 53 3e-05
AY142135_1(AY142135|pid:none) Giardia intestinalis isolate WB cl... 53 3e-05
AK054663_1(AK054663|pid:none) Homo sapiens cDNA FLJ30101 fis, cl... 53 3e-05
CP000113_6294(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 53 3e-05
CR383662_1(CR383662|pid:none) Zebrafish DNA sequence from clone ... 53 3e-05
L33861_1(L33861|pid:none) Sea urchin fibropellin Ia mRNA, 3' end. 53 3e-05
T22274(T22274)hypothetical protein F46B3.9 - Caenorhabditis eleg... 53 3e-05
CP000099_1162(CP000099|pid:none) Methanosarcina barkeri str. Fus... 53 3e-05
BC120950_1(BC120950|pid:none) Homo sapiens keratin associated pr... 53 4e-05
CP001359_3295(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 53 4e-05
AB287424_1(AB287424|pid:none) Entamoeba dispar igl2 mRNA for int... 53 4e-05
(P26372) RecName: Full=Keratin, ultra high-sulfur matrix protein... 53 4e-05
(Q90827) RecName: Full=Protein NEL; AltName: Full=93 kDa protein... 53 4e-05
AJ507288_1(AJ507288|pid:none) Cupiennius salei partial mRNA for ... 53 4e-05
AB077047_1(AB077047|pid:none) Periplaneta americana VgR mRNA for... 53 4e-05
AB011402_1(AB011402|pid:none) Hemicentrotus pulcherrimus mRNA fo... 53 4e-05
CP000769_3327(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 53 4e-05
BC108458_1(BC108458|pid:none) Xenopus laevis hypothetical protei... 53 4e-05
AK039790_1(AK039790|pid:none) Mus musculus adult male spinal cor... 53 4e-05
AF283408_1(AF283408|pid:none) Homo sapiens candidate tumor suppr... 53 4e-05
FN357317_8(FN357317|pid:none) Schistosoma mansoni genome sequenc... 53 4e-05
AF337951_1(AF337951|pid:none) Entamoeba histolytica Gal/GalNAc l... 53 4e-05
AB112441_1(AB112441|pid:none) Ciona intestinalis Ci-VWFL1 mRNA f... 53 4e-05
AF056116_15(AF056116|pid:none) Fugu rubripes serine/threonine ki... 53 4e-05
T13171(T13171) probable vitellogenin receptor - fruit fly (Droso... 53 4e-05
Z27078_4(Z27078|pid:none) Caenorhabditis elegans Cosmid K04H4, c... 53 4e-05
Z27078_3(Z27078|pid:none) Caenorhabditis elegans Cosmid K04H4, c... 53 4e-05
BC172897_1(BC172897|pid:none) Synthetic construct Homo sapiens c... 53 4e-05
AE014134_308(AE014134|pid:none) Drosophila melanogaster chromoso... 52 5e-05
AK315960_1(AK315960|pid:none) Homo sapiens cDNA, FLJ78859 comple... 52 5e-05
CR786571_11(CR786571|pid:none) Zebrafish DNA sequence from clone... 52 5e-05
BC162468_1(BC162468|pid:none) Danio rerio jagged 1a, mRNA (cDNA ... 52 5e-05
(A8MX34) RecName: Full=Putative keratin-associated protein 10-li... 52 5e-05
BC149245_1(BC149245|pid:none) Bos taurus similar to CG33196-PB, ... 52 5e-05
(Q9NR61) RecName: Full=Delta-like protein 4; AltName: Full=Droso... 52 5e-05
AB209707_1(AB209707|pid:none) Homo sapiens mRNA for low density ... 52 5e-05
AE017349_30(AE017349|pid:none) Cryptococcus neoformans var. neof... 52 5e-05
AE014134_309(AE014134|pid:none) Drosophila melanogaster chromoso... 52 5e-05
A30363(A30363)glycoprotein GP330, renal - rat (fragments) 52 5e-05
BC172899_1(BC172899|pid:none) Synthetic construct Homo sapiens c... 52 5e-05
AY661545_1(AY661545|pid:none) Olive flounder iridovirus laminin-... 52 5e-05
AC068195_1(AC068195|pid:none) Homo sapiens BAC clone RP11-114B24... 52 5e-05
AF239608_1(AF239608|pid:none) Drosophila melanogaster SP1070 mRN... 52 5e-05
CR749437_1(CR749437|pid:none) Homo sapiens mRNA; cDNA DKFZp781K1... 52 5e-05
(Q9D5Z7) RecName: Full=Keratin-associated protein 5-2; &AK01478... 52 5e-05
AK079449_1(AK079449|pid:none) Mus musculus adult female vagina c... 52 7e-05
AB174356_1(AB174356|pid:none) Macaca fascicularis brain cDNA clo... 52 7e-05
AK148084_1(AK148084|pid:none) Mus musculus B16 F10Y cells cDNA, ... 52 7e-05
CR954216_234(CR954216|pid:none) Ostreococcus tauri strain OTTH05... 52 7e-05
U57523_1(U57523|pid:none) Human nel homolog mRNA, partial cds. 52 7e-05
(O88307) RecName: Full=Sortilin-related receptor; AltName: Full=... 52 7e-05
AB015790_1(AB015790|pid:none) Mus musculus mRNA for LR11, comple... 52 7e-05
AK147303_1(AK147303|pid:none) Mus musculus adult male brain UNDE... 52 7e-05
AM746676_1800(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 52 9e-05
(Q8JZM4) RecName: Full=Delta and Notch-like epidermal growth fac... 52 9e-05
BT011063_1(BT011063|pid:none) Drosophila melanogaster LD21010 fu... 52 9e-05
(Q8N2S1) RecName: Full=Latent-transforming growth factor beta-bi... 52 9e-05
AK137635_1(AK137635|pid:none) Mus musculus adult female vagina c... 52 9e-05
U28971_1(U28971|pid:none) Caenorhabditis elegans cosmid B0244, c... 52 9e-05
BC145886_1(BC145886|pid:none) Mus musculus sushi, nidogen and EG... 52 9e-05
BC105334_1(BC105334|pid:none) Bos taurus granulin, mRNA (cDNA cl... 52 9e-05
AF463419_1(AF463419|pid:none) Naegleria gruberi basal body prote... 52 9e-05
AL110498_8(AL110498|pid:none) Caenorhabditis elegans YAC Y64G10A... 52 9e-05
Y10354_1(Y10354|pid:none) D.rerio notch6 mRNA. 52 9e-05
Z98877_12(Z98877|pid:none) Caenorhabditis elegans YAC Y69H2, com... 52 9e-05
Y13622_1(Y13622|pid:none) Homo sapiens mRNA for latent transform... 52 9e-05
DQ004683_1(DQ004683|pid:none) Xenopus laevis granulin 2 mRNA, co... 52 9e-05
(Q70E20) RecName: Full=Sushi, nidogen and EGF-like domain-contai... 52 9e-05
B88465(B88465)protein B0244.8 [imported] - Caenorhabditis elegans 52 9e-05
BC073022_1(BC073022|pid:none) Xenopus laevis hypothetical protei... 52 9e-05
Z98877_10(Z98877|pid:none) Caenorhabditis elegans YAC Y69H2, com... 52 9e-05
BC146617_1(BC146617|pid:none) Xenopus tropicalis odz, odd Oz/ten... 52 9e-05
AE014297_4008(AE014297|pid:none) Drosophila melanogaster chromos... 52 9e-05
EU273942_1(EU273942|pid:none) Amphimedon queenslandica notch mRN... 52 9e-05
AM746676_9366(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 52 9e-05
BC121936_1(BC121936|pid:none) Xenopus tropicalis CEGP1 protein, ... 52 9e-05
AF370126_1(AF370126|pid:none) Mus musculus brain EGF repeat-cont... 51 1e-04
AB209873_1(AB209873|pid:none) Homo sapiens mRNA for notch1 prepr... 51 1e-04
AY289606_1(AY289606|pid:none) Danio rerio progranulin-b mRNA, co... 51 1e-04
BC096854_1(BC096854|pid:none) Danio rerio granulin b, mRNA (cDNA... 51 1e-04
AE014297_4004(AE014297|pid:none) Drosophila melanogaster chromos... 51 1e-04
(O75690) RecName: Full=Keratin-associated protein 5-8; AltName: ... 51 1e-04
AM494941_25(AM494941|pid:none) Leishmania braziliensis chromosom... 51 1e-04
AB220440_1(AB220440|pid:none) Macaca fascicularis mRNA, clone Qc... 51 1e-04
AF387320_1(AF387320|pid:none) Gallus gallus slit-2 mRNA, partial... 51 1e-04
T27283(T27283)hypothetical protein Y64G10A.f - Caenorhabditis el... 51 1e-04
T16840(T16840)hypothetical protein T10E10.4 - Caenorhabditis ele... 51 2e-04
AF051345_1(AF051345|pid:none) Homo sapiens latent transforming g... 51 2e-04
AY570730_1(AY570730|pid:none) Danio rerio matrilin-4-like protei... 51 2e-04
AY536890_1(AY536890|pid:none) Theromyzon rude cys-rich cocoon pr... 51 2e-04
(Q8WSW3) RecName: Full=Cadmium metallothionein; AltName: Full=MT... 51 2e-04
(A8MXZ3) RecName: Full=Putative keratin-associated protein 9-2-l... 51 2e-04
T24604(T24604) hypothetical protein T06E6.10 - Caenorhabditis el... 51 2e-04
A48825(A48825)Notch homolog Motch protein - mouse (fragment) 51 2e-04
AJ005083_1(AJ005083|pid:none) Tribolium castaneum notch gene, pa... 51 2e-04
AY437145_1(AY437145|pid:none) Drosophila melanogaster isolate so... 51 2e-04
BX927239_21(BX927239|pid:none) Human DNA sequence from clone DAM... 51 2e-04
AK154429_1(AK154429|pid:none) Mus musculus NOD-derived CD11c +ve... 51 2e-04
AY173045_1(AY173045|pid:none) Morone americana vitellogenin rece... 51 2e-04
Z83743_1(Z83743|pid:none) G.duodenalis gene encoding variant-spe... 51 2e-04
AF051344_1(AF051344|pid:none) Homo sapiens latent transforming g... 51 2e-04
CR933878_21(CR933878|pid:none) Human DNA sequence from clone DAM... 51 2e-04
U39644_2(U39644|pid:none) Caenorhabditis elegans cosmid T10E10, ... 51 2e-04
BC072469_1(BC072469|pid:none) Rattus norvegicus granulin, mRNA (... 51 2e-04
AB007026_1(AB007026|pid:none) Dictyostelium discoideum DIA-1 mRN... 51 2e-04
(Q95209) RecName: Full=Sortilin-related receptor; AltName: Full=... 50 2e-04
BC013197_1(BC013197|pid:none) Homo sapiens delta-like 1 homolog ... 50 2e-04
(Q6DI48) RecName: Full=Delta-like protein A; Short=Delt... 50 2e-04
AB287420_1(AB287420|pid:none) Achaearanea tepidariorum At-Delta ... 50 2e-04
CU458989_1(CU458989|pid:none) Danio rerio cDNA, clone cssl:d0399. 50 2e-04
AJ457171_1(AJ457171|pid:none) Giardia duodenalis partial mRNA fo... 50 2e-04
BC007741_1(BC007741|pid:none) Homo sapiens delta-like 1 homolog ... 50 2e-04
AL662830_12(AL662830|pid:none) Human DNA sequence from clone XXb... 50 2e-04
AK289384_1(AK289384|pid:none) Homo sapiens cDNA FLJ78166 complet... 50 2e-04
AF315555_1(AF315555|pid:none) Caenorhabditis briggsae notch-like... 50 2e-04
(Q04592) RecName: Full=Proprotein convertase subtilisin/kexin ty... 50 3e-04
AF489528_1(AF489528|pid:none) Homo sapiens transforming growth f... 50 3e-04
(Q6N022) RecName: Full=Teneurin-4; Short=Ten-4; AltName... 50 3e-04
AY437163_1(AY437163|pid:none) Drosophila melanogaster isolate so... 50 3e-04
AB001074_1(AB001074|pid:none) Caenorhabditis elegans mRNA for la... 50 3e-04
AY437157_1(AY437157|pid:none) Drosophila melanogaster isolate so... 50 3e-04
AL844509_613(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 50 3e-04
A35626(A35626) transforming growth factor beta-1-binding protein... 50 3e-04
M24630_1(M24630|pid:none) Human hexabrachion mRNA, partial cds. 50 3e-04
AL590992_4(AL590992|pid:none) Mouse DNA sequence from clone RP23... 50 3e-04
Z70286_4(Z70286|pid:none) Caenorhabditis elegans Cosmid K08C7, c... 50 3e-04
BC156301_1(BC156301|pid:none) Synthetic construct Mus musculus c... 50 3e-04
(P80370) RecName: Full=Protein delta homolog 1; Short=D... 50 3e-04
AY437211_1(AY437211|pid:none) Drosophila melanogaster isolate so... 50 3e-04
AY130459_1(AY130459|pid:none) Homo sapiens fibulin 2 (FBLN2) mRN... 50 3e-04
A48225(A48225;JX0248) subtilisin-like proprotein convertase (EC ... 50 3e-04
AK298027_1(AK298027|pid:none) Homo sapiens cDNA FLJ51010 complet... 50 3e-04
AY437205_1(AY437205|pid:none) Drosophila melanogaster isolate so... 50 3e-04
(A8MUX0) RecName: Full=Putative keratin-associated protein 10-li... 50 3e-04
Z12172_1(Z12172|pid:none) H.sapiens dlk mRNA for putative homeot... 50 3e-04
CR940348_367(CR940348|pid:none) Theileria annulata strain Ankara... 50 3e-04
CR933357_1(CR933357|pid:none) Mini antigen, Paramecium tetraurel... 50 3e-04
AB208801_1(AB208801|pid:none) Homo sapiens mRNA for latent trans... 50 3e-04
AF010137_1(AF010137|pid:none) Mus musculus Jagged 2 protein mRNA... 50 3e-04
(Q21313) RecName: Full=Laminin-like protein epi-1; Flags: Precur... 50 3e-04
AM746676_4982(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 50 3e-04
AY437193_1(AY437193|pid:none) Drosophila melanogaster isolate so... 50 3e-04
AY628699_2(AY628699|pid:none) Sea perch iridovirus strain CH-1 O... 50 4e-04
AY892737_1(AY892737|pid:none) Synthetic construct Homo sapiens c... 50 4e-04
U89335_1(U89335|pid:none) Homo sapiens chromosome 6 notch4 (NOTC... 50 4e-04
BT029727_1(BT029727|pid:none) Drosophila melanogaster IP17596 fu... 50 4e-04
(Q6L8G4) RecName: Full=Keratin-associated protein 5-11; AltName:... 50 4e-04
AE014134_2530(AE014134|pid:none) Drosophila melanogaster chromos... 50 4e-04
AE014298_2386(AE014298|pid:none) Drosophila melanogaster chromos... 50 4e-04
EU441156_1(EU441156|pid:none) Patiria miniata delta protein mRNA... 50 4e-04
AB209409_1(AB209409|pid:none) Homo sapiens mRNA for low density ... 50 4e-04

>(Q54C31) RecName: Full=Protein psiR; Flags: Precursor;
Length = 996

Score = 264 bits (674), Expect(2) = e-101
Identities = 149/428 (34%), Positives = 204/428 (47%), Gaps = 68/428 (15%)
Frame = +3

Query: 3 DGKSCVSSPKNCNDTSFCTIDSCNSPNGTCSHSFPDPKCVSCAXXXXXXXXXXLV--QVC 176
DG+SC + PKNC+D +FCT+D+C+ NG C ++ D CV+C VC
Sbjct: 359 DGRSCETRPKNCDDLNFCTVDTCS--NGVCIYTRID-NCVNCTGPGIGCITTDQCNPNVC 415

Query: 177 SDDGASCNSIPKNCDDKNPCTQDSCSNNGVCAYTPIPNC--------SICNSTFG----- 317
S DG SC PKNC D N C SC + G+C TP+ NC C+ST G
Sbjct: 416 SPDGNSCIIQPKNCSDGNACNDPSCVSGGMCMLTPV-NCDDGDDCTFDSCSSTVGCIHTN 474

Query: 318 -----------CITTDLCQPMVCTDPDLKCEIDQTLCNDDNFCTTDSC-SGNGICAHTPV 461
CITTD C +C + C+ C+D + CT DSC S +G C + P+
Sbjct: 475 ISNCVECQNIACITTDFCNVKICINNGTTCDTVPKTCDDGDSCTIDSCVSPSGACLYEPI 534

Query: 462 DSCLTCSKNIGCITVDKCNPQICSNDNKSCITGDNGCDKGDKCSIASCESPAGNCKSTPV 641
+C+ C N CIT D C P IC D +C CD + C+ SC SP G+C + P+
Sbjct: 535 ANCVNCGGN-QCITTDFCLPLICGPDGVTCAVEPKKCDDFNPCTFDSCISPQGDCGNAPI 593

Query: 642 V-----------------------------------CDDNDPCTIDSC--NPADGTCVHQ 710
C+D + CTI+SC N TC++
Sbjct: 594 PGCVACNEILGCTTTDPCHPITCSAIGDQCVSTDKDCEDGNHCTINSCQNNNGTATCLNS 653

Query: 711 DINNCAECGKLGCITSNPCQPVSCSIT-GTECNKTKISCDDKNHCTQDACSIKDGSCYHA 887
I +C +C +GC T++ C CS T G C ++CDD CT D+C G C H
Sbjct: 654 LITHCTDCPGIGCTTTDFCFQQVCSATDGDVCTTVPLNCDDGLQCTVDSCIGPMGVCSHI 713

Query: 888 TI-NNCIDCANQACITFDACKPKKCGADGNCYEDPVT--CDDGNGCTIDSCSRNGTCSNK 1058
I C++CA + CIT D C+P CG DG C ++ + CDD N CT+D+C+ G C +
Sbjct: 714 AIAPKCLECALEPCITTDNCQPVICGPDGRCIQETIEDFCDDYNYCTVDTCTGVG-CEHA 772

Query: 1059 LIENCVSC 1082
I C +C
Sbjct: 773 SISGCRNC 780

Score = 129 bits (324), Expect(2) = e-101
Identities = 81/243 (33%), Positives = 110/243 (45%), Gaps = 16/243 (6%)
Frame = +2

Query: 1112 CEVCSKTLYCXT--DNPCELSVCPDNKDSCITKPLNXXXXXXXXXXXXXXXTNCTHTRIA 1285
C C+ + C T D+ C L VC + DSC+T LN C + I
Sbjct: 777 CRNCTNGIGCTTPSDDACNLQVCSETGDSCLTMVLNCDDNNDCTEDKCLNTGICQNNPID 836

Query: 1286 GC----------RAVPTTTGIAPHTHYCDYCHDTEICILIGDVPTCVPXXXXXXXXXXXX 1435
GC PTTTG++ CD C + C+L+ C+
Sbjct: 837 GCVTPSPVSIGGTIPPTTTGVSQVE--CDCCPIGQKCLLVNGHEICIKPATTGGIPELTT 894

Query: 1436 XXDIELVVTSGIYSTGHFTESGTTFGDKPXXXXXXXXXXXXXXPPYYNLCDRVRCGKGLE 1615
T+ +TGH+TESGT P +LCDR C +G+E
Sbjct: 895 GC----AGTTTGRATGHYTESGT---GNP------------------HLCDRYHCKRGME 929

Query: 1616 CYMIDNKPECLPSNYQCMDCWDLLCHLQ-DLSCKMVLNPHFITDK---YGQVCCKFIPTC 1783
C++++ PECLPSNY+C+DC DL C Q D +C MV NP+FI+ K YG+ CCKF P C
Sbjct: 930 CHVVNGVPECLPSNYKCLDCLDLHCERQGDFTCFMVKNPNFISSKHSCYGESCCKFTPVC 989

Query: 1784 IPR 1792
P+
Sbjct: 990 KPK 992

Score = 303 bits (776), Expect(2) = 1e-83
Identities = 156/365 (42%), Positives = 203/365 (55%), Gaps = 4/365 (1%)
Frame = +3

Query: 3 DGKSCVSSPKNCNDTSFCTIDSCNSPNGTCSHSFPDPKCVSCAXXXXXXXXXXLVQVCSD 182
DG SC + P NC++ I N CS++ CV+ A V +C+
Sbjct: 250 DGTSCCT-PNNCDNNP---IYRTNCITAKCSNNV----CVTSAPYCSSTEPCT-VGLCTP 300

Query: 183 DGASCNSIPKNCDDKNPCTQDSCSNN-GVCAYTPIPNCSICNSTFGCITTDLCQPMVCTD 359
G C+ +PKNC ++N CTQDSC++ C + PIP+C C + GCITTD C VC+
Sbjct: 301 -GVGCSVVPKNCVNENHCTQDSCNSTINACQHDPIPDCINC-AYIGCITTDYCNEQVCSA 358

Query: 360 PDLKCEIDQTLCNDDNFCTTDSCSGNGICAHTPVDSCLTCS-KNIGCITVDKCNPQICSN 536
CE C+D NFCT D+CS NG+C +T +D+C+ C+ IGCIT D+CNP +CS
Sbjct: 359 DGRSCETRPKNCDDLNFCTVDTCS-NGVCIYTRIDNCVNCTGPGIGCITTDQCNPNVCSP 417

Query: 537 DNKSCITGDNGCDKGDKCSIASCESPAGNCKSTPVVCDDNDPCTIDSCNPADGTCVHQDI 716
D SCI C G+ C+ SC S G C TPV CDD D CT DSC+ G C+H +I
Sbjct: 418 DGNSCIIQPKNCSDGNACNDPSCVS-GGMCMLTPVNCDDGDDCTFDSCSSTVG-CIHTNI 475

Query: 717 NNCAECGKLGCITSNPCQPVSCSITGTECNKTKISCDDKNHCTQDACSIKDGSCYHATIN 896
+NC EC + CIT++ C C GT C+ +CDD + CT D+C G+C + I
Sbjct: 476 SNCVECQNIACITTDFCNVKICINNGTTCDTVPKTCDDGDSCTIDSCVSPSGACLYEPIA 535

Query: 897 NCIDCANQACITFDACKPKKCGADG-NCYEDPVTCDDGNGCTIDSC-SRNGTCSNKLIEN 1070
NC++C CIT D C P CG DG C +P CDD N CT DSC S G C N I
Sbjct: 536 NCVNCGGNQCITTDFCLPLICGPDGVTCAVEPKKCDDFNPCTFDSCISPQGDCGNAPIPG 595

Query: 1071 CVSCN 1085
CV+CN
Sbjct: 596 CVACN 600

Score = 32.3 bits (72), Expect(2) = 1e-83
Identities = 26/103 (25%), Positives = 35/103 (33%), Gaps = 3/103 (2%)
Frame = +2

Query: 1100 PKENCEVCSKTLYCXTDNPCELSVCPDNKDSCITKPL---NXXXXXXXXXXXXXXXTNCT 1270
P C C++ L C T +PC C D C++ + C
Sbjct: 592 PIPGCVACNEILGCTTTDPCHPITCSAIGDQCVSTDKDCEDGNHCTINSCQNNNGTATCL 651

Query: 1271 HTRIAGCRAVPTTTGIAPHTHYCDYCHDTEICILIGDVPTCVP 1399
++ I C P GI T D+C GDV T VP
Sbjct: 652 NSLITHCTDCP---GIGCTT--TDFCFQQVCSATDGDVCTTVP 689

Score = 266 bits (679), Expect = 2e-69
Identities = 145/403 (35%), Positives = 197/403 (48%), Gaps = 45/403 (11%)
Frame = +3

Query: 6 GKSCVSSPKNCNDTSFCTIDSCNSPNGTCSHSFPDPKCVSCAXXXXXXXXXXLVQVCSDD 185
G C+ +P NC+D CT DSC+S G C H+ CV C V++C ++
Sbjct: 443 GGMCMLTPVNCDDGDDCTFDSCSSTVG-CIHTNIS-NCVECQNIACITTDFCNVKICINN 500

Query: 186 GASCNSIPKNCDDKNPCTQDSC-SNNGVCAYTPIPNCSICNSTFGCITTDLCQPMVCTDP 362
G +C+++PK CDD + CT DSC S +G C Y PI NC C CITTD C P++C
Sbjct: 501 GTTCDTVPKTCDDGDSCTIDSCVSPSGACLYEPIANCVNCGGN-QCITTDFCLPLICGPD 559

Query: 363 DLKCEIDQTLCNDDNFCTTDSC-SGNGICAHTPVDSCLTCSKNIGCITVDKCNPQICSND 539
+ C ++ C+D N CT DSC S G C + P+ C+ C++ +GC T D C+P CS
Sbjct: 560 GVTCAVEPKKCDDFNPCTFDSCISPQGDCGNAPIPGCVACNEILGCTTTDPCHPITCSAI 619

Query: 540 NKSCITGDNGCDKGDKCSIASCESPAGN-------------------------------- 623
C++ D C+ G+ C+I SC++ G
Sbjct: 620 GDQCVSTDKDCEDGNHCTINSCQNNNGTATCLNSLITHCTDCPGIGCTTTDFCFQQVCSA 679

Query: 624 -----CKSTPVVCDDNDPCTIDSCNPADGTCVHQDI-NNCAECGKLGCITSNPCQPVSCS 785
C + P+ CDD CT+DSC G C H I C EC CIT++ CQPV C
Sbjct: 680 TDGDVCTTVPLNCDDGLQCTVDSCIGPMGVCSHIAIAPKCLECALEPCITTDNCQPVICG 739

Query: 786 ITGTECNKT-KISCDDKNHCTQDACSIKDGSCYHATINNCIDCANQ-ACIT--FDACKPK 953
G +T + CDD N+CT D C+ C HA+I+ C +C N C T DAC +
Sbjct: 740 PDGRCIQETIEDFCDDYNYCTVDTCT--GVGCEHASISGCRNCTNGIGCTTPSDDACNLQ 797

Query: 954 KCGADG-NCYEDPVTCDDGNGCTIDSCSRNGTCSNKLIENCVS 1079
C G +C + CDD N CT D C G C N I+ CV+
Sbjct: 798 VCSETGDSCLTMVLNCDDNNDCTEDKCLNTGICQNNPIDGCVT 840

Score = 154 bits (390), Expect(2) = 2e-37
Identities = 89/264 (33%), Positives = 111/264 (42%), Gaps = 27/264 (10%)
Frame = +3

Query: 372 CEIDQTLCNDDNFCTTDSCSGNGICAHTPVDSCLTCSKNIGCITVDKCNPQICSNDNKSC 551
CE D T C CT ++C N I CIT KC+ N C
Sbjct: 247 CEGDGTSC-----CTPNNCDNNPIY-------------RTNCITA-KCS-------NNVC 280

Query: 552 ITGDNGCDKGDKCSIASCESPAGNCKSTPVVCDDNDPCTIDSCNPADGTCVHQDINNCAE 731
+T C + C++ C +P C P C + + CT DSCN C H I +C
Sbjct: 281 VTSAPYCSSTEPCTVGLC-TPGVGCSVVPKNCVNENHCTQDSCNSTINACQHDPIPDCIN 339

Query: 732 CGKLGCITSNPCQPVSCSITGTECNKTKISCDDKNHCTQDACSIKDGSCYHATINNCIDC 911
C +GCIT++ C CS G C +CDD N CT D CS +G C + I+NC++C
Sbjct: 340 CAYIGCITTDYCNEQVCSADGRSCETRPKNCDDLNFCTVDTCS--NGVCIYTRIDNCVNC 397

Query: 912 ANQ--ACITFDACKPKKCGADGN-------------------------CYEDPVTCDDGN 1010
CIT D C P C DGN C PV CDDG+
Sbjct: 398 TGPGIGCITTDQCNPNVCSPDGNSCIIQPKNCSDGNACNDPSCVSGGMCMLTPVNCDDGD 457

Query: 1011 GCTIDSCSRNGTCSNKLIENCVSC 1082
CT DSCS C + I NCV C
Sbjct: 458 DCTFDSCSSTVGCIHTNISNCVEC 481

Score = 26.9 bits (58), Expect(2) = 2e-37
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2

Query: 1109 NCEVCSKTLYCXTDNPCELSVCPDNKDSCITKP 1207
NC C + + C T + C + +C +N +C T P
Sbjct: 477 NCVEC-QNIACITTDFCNVKICINNGTTCDTVP 508

Score = 132 bits (331), Expect = 5e-29
Identities = 99/332 (29%), Positives = 132/332 (39%), Gaps = 15/332 (4%)
Frame = +3

Query: 3 DGKSCVSSPKNCNDTSFCTIDSCNSPNGTCSHSFPDPKCVSCAXXXXXXXXXXLVQVCSD 182
DG C + P NC+D CT+DSC P G CSH PKC+ CA +C
Sbjct: 681 DGDVCTTVPLNCDDGLQCTVDSCIGPMGVCSHIAIAPKCLECALEPCITTDNCQPVICGP 740

Query: 183 DGASC-NSIPKNCDDKNPCTQDSCSNNGVCAYTPIPNCSICNSTFGCIT--TDLCQPMVC 353
DG +I CDD N CT D+C+ G C + I C C + GC T D C VC
Sbjct: 741 DGRCIQETIEDFCDDYNYCTVDTCTGVG-CEHASISGCRNCTNGIGCTTPSDDACNLQVC 799

Query: 354 TDPDLKCEIDQTLCNDDNFCTTDSCSGNGICAHTPVDSCLTCSK-NIGCITVDKCNPQIC 530
++ C C+D+N CT D C GIC + P+D C+T S +IG P
Sbjct: 800 SETGDSCLTMVLNCDDNNDCTEDKCLNTGICQNNPIDGCVTPSPVSIG----GTIPPTTT 855

Query: 531 SNDNKSCITGDNGCDKGDKCSIAS----CESPAGNCKSTPVVCDDNDPCTIDSCNPADGT 698
C + C G KC + + C PA +T + + C + A G
Sbjct: 856 GVSQVEC----DCCPIGQKCLLVNGHEICIKPA----TTGGIPELTTGCAGTTTGRATGH 907

Query: 699 CVHQDINNCAECGKLGCITSNPCQPVSCSITGTECNKTKISCDD--KNHCTQDACSIKDG 872
N C + C C V+ EC + C D HC + D
Sbjct: 908 YTESGTGNPHLCDRYHCKRGMECHVVN---GVPECLPSNYKCLDCLDLHCERQG----DF 960

Query: 873 SCYHATINNCI----DCANQACITF-DACKPK 953
+C+ N I C ++C F CKPK
Sbjct: 961 TCFMVKNPNFISSKHSCYGESCCKFTPVCKPK 992

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,936,066,516
Number of extensions: 63507208
Number of successful extensions: 171749
Number of sequences better than 10.0: 1855
Number of HSP's gapped: 163273
Number of HSP's successfully gapped: 3826
Length of query: 610
Length of database: 1,040,966,779
Length adjustment: 135
Effective length of query: 475
Effective length of database: 608,388,304
Effective search space: 288984444400
Effective search space used: 288984444400
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.66 gvh: 0.44 alm: 0.42 top: 0.53 tms: 0.00 mit: 0.12 mip: 0.00
nuc: 0.03 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

56.0 %: cytoplasmic
24.0 %: nuclear
8.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: vacuolar
4.0 %: vesicles of secretory system

>> prediction for Contig-U11419-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 1
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 1
SF (FL, S) 1
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0