Contig-U11414-1
Contig ID Contig-U11414-1
Contig update 2002.12.18
Contig sequence
>Contig-U11414-1 (Contig-U11414-1Q) /CSM_Contig/Contig-U11414-1Q.Seq.d
TAGCAAATGTACCAAAGAATAGTAGATCAAATGTATTGTTGTACATCTAT
CAAGCAGTCTATACTTATGGTAAGGTATTATCAACGGTTGAAGATAGAAG
ACATGAAGTGATTGGGTTTGCAAGTTGTAGGTTTTTCATTAGTAGAATGG
TGTCAGCAAGTTTACAACGTCTAACTGAAGAGGATTCATTGGATTTGTAT
GTTTTCGATTTAGATTCCACTCCAATTGGTGAGTTAATTTATTATAGAGC
TTCAAATGCGGGTAATGATGATGGTAGTTCACCAACAAATATTATGAATG
GGAAAATGTTGGAAGATCGGTCCGATATGATCTATTATAACACTATGAAT
GTTGGTGGTAGGAATTGGATGATAGCTTTACGCCCATCTAGAAAGTTCAC
CAATAAACATTATACTTTCTATCCCTATGCAATTGGTGGCGTTTGTATGC
TTCTATCAGCATTGGTTTCATTTTGGTTTGCTGTAAATACTAAACATAAT
ATCAAGCTATCAGCAACCAATGAAGATTTACATAAAGAAATTTATAATAG
AAAATTGGCAGAGAAAGCATTGGCAGAGAGCCAGNNNNNNNNN-------
---TAATTCAAATAATTCTTCATCAATTATTTCACCATCTTCATTAGATT
ATAGTGATGAGAATGAACATTTAGATCTTGTATTAATTGATTTAGAAATT
TTAACTGAACATCTTAAAATACCATCAAATGTTCCAATAATATTTATTAC
ACCAACAAAATTTAATATTTCAAAACATAATGGAATTTTAAATAAATGGA
TTACTAAATCACCAAATCAAAGAGTTGAACTAATAAGAAGACCTGCAATC
ACTGATAAATTAATTCCAATAATTAGTAAATGTATTAAATCTCAAGTTCA
ATTTACTTCTGGTTCATCACAGCTTCAATCACAACAAGCAAATTTACAAC
AACAATTACTTCATCAACAACTTTGTAATAATGGTCAAACTCTAAATAAT
AATTATAACTCTGGAGGTATTGGTGGTGGTGGTGGCGGTGGAGGAAGTAA
TACAATGAATGGTAGTAGTGGTAATTTATCAAATAATAATAACTTTGGTC
AAACTCCTTTATCATCTGGTCTTGTTTTATTAGTACATACAGGTAGAACT
CCTCCTTTATTGTAATAATAATGGAAATTCTATAATTCCACCATTAGAAT
TAGCTGTTGATCATCATGGTAATCAACAACAACAACTTTACCAACAACAA
CAACAACAACAAAATAATAGTAGTGGTAACTTCCAACAATTTTATCAACA
ACAAAATAATAATAGTAATAATAGTTTCACACCAACTTTACCAAATGAAA
ATAGTAATAATAGCATTATGAATAATAGTTTAAATAACAATAATACAACA
CCATCAAATGTTACACCAACACTTTTTACATCTAGTCCATTAGATTTACA
AGGAAGAGATACACCTGTATTACAACCGCCAGCATATAGAAAGAAAGCTT
TAATCGTTGAAGATAATGAACTAAATCGTAAGGTTTTAGCTCAACTCTTT
AAGAAAATTGATTGGACCATTTCATTTGCTGAAAATGGAAGAGAAGCTCT
AAAAGAAATCACTGGCGAAAGATGTTTCGATATCGTATTCATGGATTGTC
AAATGCCAGTTTTGGATGGTTTCCAAACTACTAAAATAATAAGATCAAAA
GAAAGGGAAAATAATTGGAAGAGAATGAATATTGTTGCACTTTCAGCTGG
TTCATCTTCTTCATTTGTTCAAGATTGTTTAGATTCTGGTATGGATTCTT
TCATGGGTAAACCAATTACCCTAGCTACTCTAAAAGATGCACTAGCAAAA
TGGGGTGGTTATAATAATTAAATAAATCATGACCATTTTTTTTTAATATT
GTAATTAATAATAGGGAAAAAAAAAAAAAAA

Gap gap included
Contig length 1921
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 4212311
End point 4214223
Strand (PLUS/MINUS) PLUS
Number of clones 7
Number of EST 8
Link to clone list U11414
List of clone(s)

est1=AHJ180F,1,584
est2=AFG892E,585,1877
est3=AHJ180Z,1086,1257
est4=CHM126Z,1137,1879
est5=SSD644Z,1275,1915
est6=SLG564Z,1300,1886
est7=SLB549Z,1372,1899
est8=AFH144Z,1539,1830
Translated Amino Acid sequence
ANVPKNSRSNVLLYIYQAVYTYGKVLSTVEDRRHEVIGFASCRFFISRMVSASLQRLTEE
DSLDLYVFDLDSTPIGELIYYRASNAGNDDGSSPTNIMNGKMLEDRSDMIYYNTMNVGGR
NWMIALRPSRKFTNKHYTFYPYAIGGVCMLLSALVSFWFAVNTKHNIKLSATNEDLHKEI
YNRKLAEKALAESQXXX---

---NSNNSSSIISPSSLDYSDENEHLDLVLIDLEILTEHLKIPSNVPIIFITPTKFNISK
HNGILNKWITKSPNQRVELIRRPAITDKLIPIISKCIKSQVQFTSGSSQLQSQQANLQQQ
LLHQQLCNNGQTLNNNYNSGGIGGGGGGGGSNTMNGSSGNLSNNNNFGQTPLSSGLVLLV
HTGRTPPLL***wkfynstirisc*ssw*sttttlpttttttk***w*lptilsttk***
***fhtnftk*k****hye**fk*q*yntikcytntfyi*sirftrkrytcittasi*ke
sfnr*r**tks*gfsstl*en*ldhfic*kwkrsskrnhwrkmfryrihglsnasfgwfp
ny*nnkikrkgk*leeneycctfswfifficsrlfrfwygffhg*tnypsyskrctskmg
wl**lnks*pfffnivinnrekkkk


Translated Amino Acid sequence (All Frames)
Frame A:
*qmyqrivdqmycctsikqsilmvryyqrlkiedmk*lglqvvgfslvewcqqvynv*lk
rihwicmfsi*iplqlvs*fiielqmrvmmmvvhqqil*mgkcwkigpi*siitl*mlvv
gig**lyahlesspiniilsipmqlvafvcfyqhwfhfgll*ilniissyqqpmkiyikk
fiienwqrkhwqraxxx---

---*fk*ffinyftifirl***e*tfrscin*frnfn*ts*ntikcsnniyytnki*yfk
t*wnfk*mdy*itksks*tnkktcnh**insnn**my*isssiyfwfitasittskfttt
itssttl**wsnsk**l*lwrywwwwwrwrk*ynew**w*fik***lwsnsfiiwscfis
tyr*nssfiviimeil*fhh*n*lliimvinnnnftnnnnnnkiivvvtsnnfinnkiii
viivshqlyqmkiviial*iiv*itiiqhhqmlhqhflhlvh*iykeeihlyynrqhier
kl*slkimn*ivrf*lnslrkligpfhllkmeekl*kkslakdvsisyswivkcqfwmvs
kllk**dqkkgkiigre*illhfqlvhllhlfkiv*ilvwilswvnqlp*ll*kmh*qng
vviiik*imtiff*ycn***gkkkk

Frame B:
skctke**ikcivvhlssslylw*giing*r*kt*sdwvckl*vfh**ngvskfttsn*r
gfigfvcfrfrfhsnw*vnll*sfkcg***w*ftnkyyewenvgrsvrydll*hyecww*
elddsftpi*kvhq*tlyflslcnwwrlyasisigfilvccky*t*yqaisnq*rft*rn
l**kigresigrepxxx---

---NSNNSSSIISPSSLDYSDENEHLDLVLIDLEILTEHLKIPSNVPIIFITPTKFNISK
HNGILNKWITKSPNQRVELIRRPAITDKLIPIISKCIKSQVQFTSGSSQLQSQQANLQQQ
LLHQQLCNNGQTLNNNYNSGGIGGGGGGGGSNTMNGSSGNLSNNNNFGQTPLSSGLVLLV
HTGRTPPLL***wkfynstirisc*ssw*sttttlpttttttk***w*lptilsttk***
***fhtnftk*k****hye**fk*q*yntikcytntfyi*sirftrkrytcittasi*ke
sfnr*r**tks*gfsstl*en*ldhfic*kwkrsskrnhwrkmfryrihglsnasfgwfp
ny*nnkikrkgk*leeneycctfswfifficsrlfrfwygffhg*tnypsyskrctskmg
wl**lnks*pfffnivinnrekkkk

Frame C:
ANVPKNSRSNVLLYIYQAVYTYGKVLSTVEDRRHEVIGFASCRFFISRMVSASLQRLTEE
DSLDLYVFDLDSTPIGELIYYRASNAGNDDGSSPTNIMNGKMLEDRSDMIYYNTMNVGGR
NWMIALRPSRKFTNKHYTFYPYAIGGVCMLLSALVSFWFAVNTKHNIKLSATNEDLHKEI
YNRKLAEKALAESQXXX---

---iqiilhqlfhhlh*iivmrmni*ily*li*kf*lnilkyhqmfq*yllhqqnlifqn
imef*ingllnhqikeln**edlqslin*fq*lvnvlnlkfnlllvhhsfnhnkqiynnn
yfinnfvimvkl*iiiitlevlvvvvaveeviq*mvvvviyqiiitlvkllyhlvlfy*y
iqvelllycnnngnsiipplelavdhhgnqqqqlyqqqqqqqnnssgnfqqfyqqqnnns
nnsftptlpnensnnsimnnslnnnnttpsnvtptlftsspldlqgrdtpvlqppayrkk
alivednelnrkvlaqlfkkidwtisfaengrealkeitgercfdivfmdcqmpvldgfq
ttkiirskerennwkrmnivalsagssssfvqdcldsgmdsfmgkpitlatlkdalakwg
gynn*inhdhfflil*liigkkkkk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11414-1 (Contig-U11414-1Q)
/CSM_Contig/Contig-U11414-1Q.Seq.d
(1931 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11414-1 (Contig-U11414-1Q) /CSM_Contig/Conti... 1243 0.0
Contig-U13898-1 (Contig-U13898-1Q) /CSM_Contig/Conti... 48 4e-05
Contig-U07403-1 (Contig-U07403-1Q) /CSM_Contig/Conti... 48 4e-05
Contig-U05092-1 (Contig-U05092-1Q) /CSM_Contig/Conti... 48 4e-05
Contig-U14898-1 (Contig-U14898-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U13980-1 (Contig-U13980-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U11154-1 (Contig-U11154-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U06893-1 (Contig-U06893-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U13053-1 (Contig-U13053-1Q) /CSM_Contig/Conti... 44 6e-04
Contig-U12521-1 (Contig-U12521-1Q) /CSM_Contig/Conti... 44 6e-04

>Contig-U11414-1 (Contig-U11414-1Q) /CSM_Contig/Contig-U11414-1Q.Seq.d
Length = 1931

Score = 1243 bits (627), Expect = 0.0
Identities = 645/654 (98%)
Strand = Plus / Plus


Query: 1263 aataatagtagtggtaacttccaacaattttatcaacaacaaaataataatagtaataat 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1263 aataatagtagtggtaacttccaacaattttatcaacaacaaaataataatagtaataat 1322


Query: 1323 agtttcacaccaactttaccaaatgaaaatagtaataatagcattatgaataatagttta 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1323 agtttcacaccaactttaccaaatgaaaatagtaataatagcattatgaataatagttta 1382


Query: 1383 aataacaataatacaacaccatcaaatgttacaccaacactttttacatctagtccatta 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1383 aataacaataatacaacaccatcaaatgttacaccaacactttttacatctagtccatta 1442


Query: 1443 gatttacaaggaagagatacacctgtattacaaccgccagcatatagaaagaaagcttta 1502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1443 gatttacaaggaagagatacacctgtattacaaccgccagcatatagaaagaaagcttta 1502


Query: 1503 atcgttgaagataatgaactaaatcgtaaggttttagctcaactctttaagaaaattgat 1562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1503 atcgttgaagataatgaactaaatcgtaaggttttagctcaactctttaagaaaattgat 1562


Query: 1563 tggaccatttcatttgctgaaaatggaagagaagctctaaaagaaatcactggcgaaaga 1622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1563 tggaccatttcatttgctgaaaatggaagagaagctctaaaagaaatcactggcgaaaga 1622


Query: 1623 tgtttcgatatcgtattcatggattgtcaaatgccagttttggatggtttccaaactact 1682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1623 tgtttcgatatcgtattcatggattgtcaaatgccagttttggatggtttccaaactact 1682


Query: 1683 aaaataataagatcaaaagaaagggaaaataattggaagagaatgaatattgttgcactt 1742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1683 aaaataataagatcaaaagaaagggaaaataattggaagagaatgaatattgttgcactt 1742


Query: 1743 tcagctggttcatcttcttcatttgttcaagattgtttagattctggtatggattctttc 1802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1743 tcagctggttcatcttcttcatttgttcaagattgtttagattctggtatggattctttc 1802


Query: 1803 atgggtaaaccaattaccctagctactctaaaagatgcactagcaaaatggggtggttat 1862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1803 atgggtaaaccaattaccctagctactctaaaagatgcactagcaaaatggggtggttat 1862


Query: 1863 aataattaaataaatcatgaccannnnnnnnnaatattgtaattaataataggg 1916
||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1863 aataattaaataaatcatgaccatttttttttaatattgtaattaataataggg 1916


Score = 1229 bits (620), Expect = 0.0
Identities = 620/620 (100%)
Strand = Plus / Plus


Query: 604 taattcaaataattcttcatcaattatttcaccatcttcattagattatagtgatgagaa 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 taattcaaataattcttcatcaattatttcaccatcttcattagattatagtgatgagaa 663


Query: 664 tgaacatttagatcttgtattaattgatttagaaattttaactgaacatcttaaaatacc 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 tgaacatttagatcttgtattaattgatttagaaattttaactgaacatcttaaaatacc 723


Query: 724 atcaaatgttccaataatatttattacaccaacaaaatttaatatttcaaaacataatgg 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 atcaaatgttccaataatatttattacaccaacaaaatttaatatttcaaaacataatgg 783


Query: 784 aattttaaataaatggattactaaatcaccaaatcaaagagttgaactaataagaagacc 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 aattttaaataaatggattactaaatcaccaaatcaaagagttgaactaataagaagacc 843


Query: 844 tgcaatcactgataaattaattccaataattagtaaatgtattaaatctcaagttcaatt 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 tgcaatcactgataaattaattccaataattagtaaatgtattaaatctcaagttcaatt 903


Query: 904 tacttctggttcatcacagcttcaatcacaacaagcaaatttacaacaacaattacttca 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 tacttctggttcatcacagcttcaatcacaacaagcaaatttacaacaacaattacttca 963


Query: 964 tcaacaactttgtaataatggtcaaactctaaataataattataactctggaggtattgg 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 tcaacaactttgtaataatggtcaaactctaaataataattataactctggaggtattgg 1023


Query: 1024 tggtggtggtggcggtggaggaagtaatacaatgaatggtagtagtggtaatttatcaaa 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 tggtggtggtggcggtggaggaagtaatacaatgaatggtagtagtggtaatttatcaaa 1083


Query: 1084 taataataactttggtcaaactcctttatcatctggtcttgttttattagtacatacagg 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 taataataactttggtcaaactcctttatcatctggtcttgttttattagtacatacagg 1143


Query: 1144 tagaactcctcctttattgtaataataatggaaattctataattccaccattagaattag 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 tagaactcctcctttattgtaataataatggaaattctataattccaccattagaattag 1203


Query: 1204 ctgttgatcatcatggtaat 1223
||||||||||||||||||||
Sbjct: 1204 ctgttgatcatcatggtaat 1223


Score = 1158 bits (584), Expect = 0.0
Identities = 584/584 (100%)
Strand = Plus / Plus


Query: 1 tagcaaatgtaccaaagaatagtagatcaaatgtattgttgtacatctatcaagcagtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagcaaatgtaccaaagaatagtagatcaaatgtattgttgtacatctatcaagcagtct 60


Query: 61 atacttatggtaaggtattatcaacggttgaagatagaagacatgaagtgattgggtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atacttatggtaaggtattatcaacggttgaagatagaagacatgaagtgattgggtttg 120


Query: 121 caagttgtaggtttttcattagtagaatggtgtcagcaagtttacaacgtctaactgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caagttgtaggtttttcattagtagaatggtgtcagcaagtttacaacgtctaactgaag 180


Query: 181 aggattcattggatttgtatgttttcgatttagattccactccaattggtgagttaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggattcattggatttgtatgttttcgatttagattccactccaattggtgagttaattt 240


Query: 241 attatagagcttcaaatgcgggtaatgatgatggtagttcaccaacaaatattatgaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attatagagcttcaaatgcgggtaatgatgatggtagttcaccaacaaatattatgaatg 300


Query: 301 ggaaaatgttggaagatcggtccgatatgatctattataacactatgaatgttggtggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggaaaatgttggaagatcggtccgatatgatctattataacactatgaatgttggtggta 360


Query: 361 ggaattggatgatagctttacgcccatctagaaagttcaccaataaacattatactttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaattggatgatagctttacgcccatctagaaagttcaccaataaacattatactttct 420


Query: 421 atccctatgcaattggtggcgtttgtatgcttctatcagcattggtttcattttggtttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atccctatgcaattggtggcgtttgtatgcttctatcagcattggtttcattttggtttg 480


Query: 481 ctgtaaatactaaacataatatcaagctatcagcaaccaatgaagatttacataaagaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgtaaatactaaacataatatcaagctatcagcaaccaatgaagatttacataaagaaa 540


Query: 541 tttataatagaaaattggcagagaaagcattggcagagagccag 584
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tttataatagaaaattggcagagaaagcattggcagagagccag 584


Score = 34.2 bits (17), Expect = 0.54
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 1296 caacaacaaaataataatagt 1316
|||||||||||||||| ||||
Sbjct: 1254 caacaacaaaataatagtagt 1274


>Contig-U13898-1 (Contig-U13898-1Q) /CSM_Contig/Contig-U13898-1Q.Seq.d
Length = 1283

Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus


Query: 1296 caacaacaaaataataatagtaataata 1323
||||||||||||||||||| ||||||||
Sbjct: 1058 caacaacaaaataataataataataata 1085


Score = 30.2 bits (15), Expect = 8.5
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 723 catcaaatgttccaa 737
|||||||||||||||
Sbjct: 551 catcaaatgttccaa 537


Score = 30.2 bits (15), Expect = 8.5
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 1305 aataataatagtaataata 1323
|||||||||||||| ||||
Sbjct: 1085 aataataatagtaacaata 1103


>Contig-U07403-1 (Contig-U07403-1Q) /CSM_Contig/Contig-U07403-1Q.Seq.d
Length = 1700

Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus


Query: 1296 caacaacaaaataataatagtaataata 1323
||||||||||||||||||| ||||||||
Sbjct: 424 caacaacaaaataataataataataata 451


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 51,288
Number of Sequences: 6905
Number of extensions: 51288
Number of successful extensions: 7806
Number of sequences better than 10.0: 1428
length of query: 1931
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1915
effective length of database: 5,564,391
effective search space: 10655808765
effective search space used: 10655808765
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.24
Homology vs DNA
Query= Contig-U11414-1 (Contig-U11414-1Q) /CSM_Contig/Contig-U11414-1Q.Seq.d
(1931 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ335370) Dictyostelium discoideum cDNA clone:dda49o19, 5' ... 1156 0.0 1
(U42597) Dictyostelium discoideum histidine kinase A (dhkA) ... 1148 0.0 1
(AU039844) Dictyostelium discoideum slug cDNA, clone SLG564. 1126 0.0 1
(BJ382903) Dictyostelium discoideum cDNA clone:ddc46c07, 3' ... 1120 0.0 1
(BJ325500) Dictyostelium discoideum cDNA clone:dda14h24, 5' ... 1106 0.0 2
(BJ342619) Dictyostelium discoideum cDNA clone:dda14h24, 3' ... 1078 0.0 1
(AU037441) Dictyostelium discoideum slug cDNA, clone SSD644. 890 0.0 4
(AU033871) Dictyostelium discoideum slug cDNA, clone SLB549. 967 0.0 2
(BJ342902) Dictyostelium discoideum cDNA clone:dda15g11, 3' ... 535 e-147 1
(BJ353374) Dictyostelium discoideum cDNA clone:dda49o19, 3' ... 137 2e-27 1
(AF362375) Dictyostelium discoideum histidine kinase DhkE (d... 84 4e-21 7
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 40 2e-05 16
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 38 4e-05 18
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 42 1e-04 16
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 36 6e-04 13
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 40 6e-04 13
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 40 8e-04 15
(AF362369) Dictyostelium discoideum histidine kinase DhkG (d... 36 0.001 8
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 36 0.001 16
(BJ356352) Dictyostelium discoideum cDNA clone:dda60f01, 3' ... 42 0.002 2
(BJ349269) Dictyostelium discoideum cDNA clone:dda35o21, 3' ... 42 0.002 2
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 38 0.002 11
(ET542089) fcg3x.307350i17.f C. graminicola genomic sequence... 56 0.005 1
(ET541336) fcg3x.228150l21.f C. graminicola genomic sequence... 56 0.005 1
(ET474774) fcg2x.pk035.b9 C. graminicola genomic sequence Gl... 56 0.005 1
(AC115584) Dictyostelium discoideum chromosome 2 map complem... 40 0.008 6
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 38 0.011 8
(BJ378107) Dictyostelium discoideum cDNA clone:ddc27e07, 3' ... 42 0.017 2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 40 0.019 17
(DQ038214) Homo sapiens SRPK2 gene, VIRTUAL TRANSCRIPT, part... 54 0.020 1
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 32 0.048 19
(AL035476) Plasmodium falciparum MAL4P3. 36 0.048 15
(AF029726) Dictyostelium discoideum histidine kinase C (dhkC... 34 0.058 6
(EY298173) CAWX13765.rev CAWX Helobdella robusta Primary Ear... 38 0.064 2
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 36 0.072 12
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 36 0.076 15
(CU074400) Mouse DNA sequence from clone RP23-88A13 on chrom... 52 0.080 1
(AR270140) Sequence 703 from patent US 6500938. 52 0.080 1
(BI747704) rm45h04.y1 Meloidogyne arenaria egg pAMP1 v1 Chia... 52 0.080 1
(BI142945) rk76f05.y1 Meloidogyne javanica egg pAMP1 v6 Chia... 52 0.080 1
(FD456443) EGGB781TR Haematobia irritans eggs Haematobia irr... 52 0.080 1
(FD450512) EGGA584TR Haematobia irritans eggs Haematobia irr... 52 0.080 1
(FD450511) EGGA584TF Haematobia irritans eggs Haematobia irr... 52 0.080 1
(CL065913) CH216-105L20_Sp6.1 CH216 Xenopus (Silurana) tropi... 36 0.10 4
(AF361474) Dictyostelium discoideum receptor histidine kinas... 34 0.10 6
(ER465597) 1092963920527 Global-Ocean-Sampling_GS-35-01-01-1... 44 0.12 2
(EL683183) OPYF02418 Elaeis guineensis young flower 4-6 cm E... 50 0.13 2
(AF088979) Dictyostelium discoideum beige protein homolog (l... 42 0.14 5
(DY889803) CeleSEQ6751 Cunninghamella elegans pBluescript (E... 36 0.16 3
(CP000102) Methanosphaera stadtmanae DSM 3091, complete genome. 40 0.17 24
(AC126134) Rattus norvegicus clone CH230-23O13, WORKING DRAF... 40 0.18 2
(AC163665) Mus musculus BAC clone RP23-325J23 from chromosom... 34 0.18 2
(AC150245) Medicago truncatula chromosome 7 clone mth2-48m18... 36 0.19 6
(AC168567) Strongylocentrotus purpuratus clone R3-3065P13, W... 34 0.19 2
(AC177958) Strongylocentrotus purpuratus clone R3-3049E17, W... 40 0.19 2
(EJ862653) 1093018216097 Global-Ocean-Sampling_GS-30-02-01-1... 44 0.19 2
(AC168727) Strongylocentrotus purpuratus clone R3-3010L3, WO... 40 0.19 2
(AC201020) Strongylocentrotus purpuratus clone R3-12H3, WORK... 40 0.19 2
(AL844506) Plasmodium falciparum chromosome 7. 34 0.19 21
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 50 0.22 21
(BZ464654) BONDK06TR BO_1.6_2_KB_tot Brassica oleracea genom... 40 0.24 2
(EE549367) BNQA_UP_014_H03_18SEP2003_017 Brassica napus BNQA... 40 0.24 2
(C84208) Dictyostelium discoideum slug cDNA, clone SSB304. 38 0.24 2
(AL034559) Plasmodium falciparum MAL3P7. 32 0.24 16
(AM059620) Brassica oleracea var. alboglabra EST, clone AAF... 40 0.25 2
(AY387646) Dictyostelium discoideum Phg1B (phg1b) gene, comp... 44 0.26 4
(AE014834) Plasmodium falciparum 3D7 chromosome 10 section 6... 32 0.28 13
(BJ340962) Dictyostelium discoideum cDNA clone:dda4g13, 3' e... 34 0.29 3
(BJ341826) Dictyostelium discoideum cDNA clone:dda8h08, 3' e... 34 0.29 3
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 34 0.29 14
(BJ436302) Dictyostelium discoideum cDNA clone:ddv30a22, 3' ... 34 0.30 3
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 42 0.31 13
(BJ372342) Dictyostelium discoideum cDNA clone:ddc12p01, 3' ... 34 0.31 3
(CS468836) Sequence 27 from Patent EP1748080. 36 0.32 4
(CS468835) Sequence 26 from Patent EP1748080. 36 0.32 4
(CS419313) Sequence 27 from Patent WO2006094836. 36 0.32 4
(CS419312) Sequence 26 from Patent WO2006094836. 36 0.32 4
(BX248228) Zebrafish DNA sequence from clone RP71-40J23 in l... 50 0.32 1
(DQ894519) Synthetic construct Homo sapiens clone IMAGE:1000... 50 0.32 1
(DQ891337) Synthetic construct clone IMAGE:100003967; FLH171... 50 0.32 1
(CU690050) Synthetic construct Homo sapiens gateway clone IM... 50 0.32 1
(CU686663) Synthetic construct Homo sapiens gateway clone IM... 50 0.32 1
(AY891346) Synthetic construct Homo sapiens clone FLH147944.... 50 0.32 1
(BX072542) Oryza sativa chromosome 12, . Partial sequence fr... 50 0.32 1
(AP008218) Oryza sativa (japonica cultivar-group) genomic DN... 50 0.32 1
(AM476489) Vitis vinifera, whole genome shotgun sequence, co... 50 0.32 1
(AM475140) Vitis vinifera contig VV78X055579.8, whole genome... 50 0.32 1
(AL831810) Oryza sativa chromosome 12, . BAC OSJNBa0077B14 o... 50 0.32 1
(DJ031943) BIOMARKERS OF CYCLIN-DEPENDENT KINASE MODULATION. 50 0.32 1
(DI159496) Method of regulating phosphorylation of SR protei... 50 0.32 1
(DD394410) COMPOSITIOSN AND METHODSF OR THE TREATMENT OF NAT... 50 0.32 1
(DD192119) Methods for regulating phosphorylation of SR prot... 50 0.32 1
(CS350876) Sequence 260 from Patent WO2006013561. 50 0.32 1
(CS040263) Sequence 817 from Patent WO2005019258. 50 0.32 1
(CS031311) Sequence 817 from Patent WO2005016962. 50 0.32 1
(CQ715987) Sequence 1921 from Patent WO02068579. 50 0.32 1
(CQ587972) Sequence 15730 from Patent WO0171042. 50 0.32 1
(CQ413148) Sequence 20219 from Patent WO0170979. 50 0.32 1
(CQ407621) Sequence 14692 from Patent WO0170979. 50 0.32 1
(CQ401237) Sequence 8308 from Patent WO0170979. 50 0.32 1

>(BJ335370) Dictyostelium discoideum cDNA clone:dda49o19, 5' end,
single read.
Length = 584

Score = 1156 bits (583), Expect = 0.0
Identities = 583/583 (100%)
Strand = Plus / Plus


Query: 1 tagcaaatgtaccaaagaatagtagatcaaatgtattgttgtacatctatcaagcagtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagcaaatgtaccaaagaatagtagatcaaatgtattgttgtacatctatcaagcagtct 60


Query: 61 atacttatggtaaggtattatcaacggttgaagatagaagacatgaagtgattgggtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atacttatggtaaggtattatcaacggttgaagatagaagacatgaagtgattgggtttg 120


Query: 121 caagttgtaggtttttcattagtagaatggtgtcagcaagtttacaacgtctaactgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caagttgtaggtttttcattagtagaatggtgtcagcaagtttacaacgtctaactgaag 180


Query: 181 aggattcattggatttgtatgttttcgatttagattccactccaattggtgagttaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggattcattggatttgtatgttttcgatttagattccactccaattggtgagttaattt 240


Query: 241 attatagagcttcaaatgcgggtaatgatgatggtagttcaccaacaaatattatgaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attatagagcttcaaatgcgggtaatgatgatggtagttcaccaacaaatattatgaatg 300


Query: 301 ggaaaatgttggaagatcggtccgatatgatctattataacactatgaatgttggtggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggaaaatgttggaagatcggtccgatatgatctattataacactatgaatgttggtggta 360


Query: 361 ggaattggatgatagctttacgcccatctagaaagttcaccaataaacattatactttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaattggatgatagctttacgcccatctagaaagttcaccaataaacattatactttct 420


Query: 421 atccctatgcaattggtggcgtttgtatgcttctatcagcattggtttcattttggtttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atccctatgcaattggtggcgtttgtatgcttctatcagcattggtttcattttggtttg 480


Query: 481 ctgtaaatactaaacataatatcaagctatcagcaaccaatgaagatttacataaagaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgtaaatactaaacataatatcaagctatcagcaaccaatgaagatttacataaagaaa 540


Query: 541 tttataatagaaaattggcagagaaagcattggcagagagcca 583
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tttataatagaaaattggcagagaaagcattggcagagagcca 583

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,295,523,878
Number of extensions: 147478840
Number of successful extensions: 13469829
Number of sequences better than 10.0: 1137
Length of query: 1931
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1907
Effective length of database: 97,308,875,965
Effective search space: 185568026465255
Effective search space used: 185568026465255
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.30
Homology vs Protein
Query= Contig-U11414-1 (Contig-U11414-1Q) /CSM_Contig/Contig-U11414-1Q.Seq.d
(1931 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AF362375_1(AF362375|pid:none) Dictyostelium discoideum histidine... 200 2e-49
(Q55E44) RecName: Full=Hybrid signal transduction histidine kina... 200 2e-49
CP000089_232(CP000089|pid:none) Dechloromonas aromatica RCB, com... 105 4e-21
CP000749_1167(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 100 1e-19
CP000155_3725(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 100 2e-19
AF462151_1(AF462151|pid:none) Tritrichomonas foetus hybrid histi... 100 3e-19
CP000388_3573(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 99 4e-19
AE017282_1130(AE017282|pid:none) Methylococcus capsulatus str. B... 99 4e-19
CP000510_3145(CP000510|pid:none) Psychromonas ingrahamii 37, com... 99 5e-19
CP001025_1600(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 99 7e-19
CP000116_1268(CP000116|pid:none) Thiobacillus denitrificans ATCC... 99 7e-19
CP000155_2206(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 96 5e-18
CP000514_1340(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 96 5e-18
CP000282_1919(CP000282|pid:none) Saccharophagus degradans 2-40, ... 96 5e-18
FM178380_316(FM178380|pid:none) Aliivibrio salmonicida LFI1238 c... 95 8e-18
CP000089_2758(CP000089|pid:none) Dechloromonas aromatica RCB, co... 95 8e-18
CR954247_279(CR954247|pid:none) Pseudoalteromonas haloplanktis s... 95 8e-18
CP000282_3642(CP000282|pid:none) Saccharophagus degradans 2-40, ... 94 2e-17
CP000089_1809(CP000089|pid:none) Dechloromonas aromatica RCB, co... 94 2e-17
BA000045_718(BA000045|pid:none) Gloeobacter violaceus PCC 7421 D... 94 2e-17
CP000376_574(CP000376|pid:none) Silicibacter sp. TM1040 mega pla... 94 2e-17
CP001111_156(CP001111|pid:none) Stenotrophomonas maltophilia R55... 93 4e-17
CP001032_2207(CP001032|pid:none) Opitutus terrae PB90-1, complet... 93 4e-17
CP001281_1680(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 93 4e-17
CP000142_1154(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 93 4e-17
CP001358_1581(CP001358|pid:none) Desulfovibrio desulfuricans sub... 92 5e-17
CP000482_891(CP000482|pid:none) Pelobacter propionicus DSM 2379,... 92 7e-17
AE016796_1099(AE016796|pid:none) Vibrio vulnificus CMCP6 chromos... 92 9e-17
CP000721_3021(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 92 9e-17
CP000934_2399(CP000934|pid:none) Cellvibrio japonicus Ueda107, c... 92 9e-17
CP001124_63(CP001124|pid:none) Geobacter bemidjiensis Bem, compl... 91 1e-16
CP001133_395(CP001133|pid:none) Vibrio fischeri MJ11 chromosome ... 91 1e-16
CU459003_3466(CU459003|pid:none) Magnetospirillum gryphiswaldens... 91 1e-16
CP000721_2481(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 91 1e-16
CP000462_2130(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 91 1e-16
CP001124_3149(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 91 1e-16
CP000021_360(CP000021|pid:none) Vibrio fischeri ES114 chromosome... 91 2e-16
CP000930_1556(CP000930|pid:none) Heliobacterium modesticaldum Ic... 91 2e-16
CP000471_2451(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 90 3e-16
CT573326_4520(CT573326|pid:none) Pseudomonas entomophila str. L4... 90 3e-16
BA000038_8(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, chrom... 90 3e-16
CP000109_66(CP000109|pid:none) Thiomicrospira crunogena XCL-2, c... 90 3e-16
CP001124_801(CP001124|pid:none) Geobacter bemidjiensis Bem, comp... 90 3e-16
CP000851_285(CP000851|pid:none) Shewanella pealeana ATCC 700345,... 90 3e-16
CP000058_4255(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 90 3e-16
AL392144_8(AL392144|pid:none) Arabidopsis thaliana DNA chromosom... 90 3e-16
FM954972_1702(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 89 4e-16
CP000943_3136(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 89 4e-16
CP000556_70(CP000556|pid:none) Methylibium petroleiphilum PM1 pl... 89 6e-16
CP000473_1040(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 89 6e-16
CP000851_2366(CP000851|pid:none) Shewanella pealeana ATCC 700345... 89 6e-16
CP000155_5040(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 89 6e-16
AM270141_4(AM270141|pid:none) Aspergillus niger contig An07c0240... 89 6e-16
CP000961_2807(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 89 7e-16
FM954973_1477(FM954973|pid:none) Vibrio splendidus LGP32 chromos... 89 7e-16
BA000045_33(BA000045|pid:none) Gloeobacter violaceus PCC 7421 DN... 89 7e-16
CP000444_3283(CP000444|pid:none) Shewanella sp. MR-7, complete g... 89 7e-16
CP000446_713(CP000446|pid:none) Shewanella sp. MR-4, complete ge... 89 7e-16
CP001252_834(CP001252|pid:none) Shewanella baltica OS223, comple... 89 7e-16
CP000859_981(CP000859|pid:none) Desulfococcus oleovorans Hxd3, c... 89 7e-16
CP000563_3445(CP000563|pid:none) Shewanella baltica OS155, compl... 89 7e-16
AM920431_1106(AM920431|pid:none) Penicillium chrysogenum Wiscons... 89 7e-16
CP000931_3967(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 88 1e-15
CP000753_816(CP000753|pid:none) Shewanella baltica OS185, comple... 88 1e-15
CP000891_865(CP000891|pid:none) Shewanella baltica OS195, comple... 88 1e-15
CP000509_1937(CP000509|pid:none) Nocardioides sp. JS614, complet... 88 1e-15
AP007166_194(AP007166|pid:none) Aspergillus oryzae RIB40 genomic... 88 1e-15
CP000961_2949(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 88 1e-15
CP000089_1760(CP000089|pid:none) Dechloromonas aromatica RCB, co... 88 1e-15
CP000472_1885(CP000472|pid:none) Shewanella piezotolerans WP3, c... 88 1e-15
CP000075_4407(CP000075|pid:none) Pseudomonas syringae pv. syring... 88 1e-15
BA000031_1876(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22... 88 1e-15
AY456037_1(AY456037|pid:none) Gibberella moniliformis putative h... 87 2e-15
CP001087_1355(CP001087|pid:none) Desulfobacterium autotrophicum ... 87 2e-15
CP000083_4035(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 87 2e-15
DQ431691_1(DQ431691|pid:none) Striga asiatica SHK300 mRNA, compl... 87 2e-15
CP000606_3781(CP000606|pid:none) Shewanella loihica PV-4, comple... 87 2e-15
CP001322_3893(CP001322|pid:none) Desulfatibacillum alkenivorans ... 87 2e-15
CP000094_611(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, c... 87 2e-15
CP000507_2942(CP000507|pid:none) Shewanella amazonensis SB2B, co... 87 2e-15
CP000514_2654(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 87 2e-15
CP000469_3397(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 87 2e-15
AE015451_4759(AE015451|pid:none) Pseudomonas putida KT2440 compl... 87 2e-15
CP000153_219(CP000153|pid:none) Sulfurimonas denitrificans DSM 1... 87 2e-15
CP000681_3118(CP000681|pid:none) Shewanella putrefaciens CN-32, ... 87 2e-15
CP000790_2281(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 87 2e-15
CP001101_1689(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 87 2e-15
AY282750_1(AY282750|pid:none) Emericella nidulans histidine kina... 87 2e-15
CP000949_4588(CP000949|pid:none) Pseudomonas putida W619, comple... 87 2e-15
CP000606_3193(CP000606|pid:none) Shewanella loihica PV-4, comple... 87 2e-15
CP000127_1216(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 87 2e-15
CP000851_627(CP000851|pid:none) Shewanella pealeana ATCC 700345,... 87 3e-15
AP008212_1719(AP008212|pid:none) Oryza sativa (japonica cultivar... 87 3e-15
AM181176_1695(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 86 4e-15
CP000089_8(CP000089|pid:none) Dechloromonas aromatica RCB, compl... 86 4e-15
CP001103_3140(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 86 4e-15
CP001103_1169(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 86 4e-15
CP000821_1751(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 86 4e-15
AE008922_480(AE008922|pid:none) Xanthomonas campestris pv. campe... 86 4e-15
AE008923_491(AE008923|pid:none) Xanthomonas axonopodis pv. citri... 86 5e-15
AF258796_1(AF258796|pid:none) Dictyostelium discoideum hybrid hi... 86 5e-15
AY082893_4(AY082893|pid:none) Burkholderia cepacia cable pilin o... 86 5e-15
AF362373_1(AF362373|pid:none) Dictyostelium discoideum histidine... 86 5e-15
AM747721_2769(AM747721|pid:none) Burkholderia cenocepacia J2315 ... 86 5e-15
(Q86CZ2) RecName: Full=Hybrid signal transduction histidine kina... 86 6e-15
DQ139261_23(DQ139261|pid:none) Vibro sp. DAT722 inDAT722 integro... 86 6e-15
CP000509_4258(CP000509|pid:none) Nocardioides sp. JS614, complet... 86 6e-15
CP000091_604(CP000091|pid:none) Ralstonia eutropha JMP134 chromo... 85 8e-15
AE016795_2427(AE016795|pid:none) Vibrio vulnificus CMCP6 chromos... 85 8e-15
CQ802938_1(CQ802938|pid:none) Sequence 56 from Patent EP1415996. 85 8e-15
CP000076_2939(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 85 8e-15
AP009049_1009(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 85 8e-15
CP000821_985(CP000821|pid:none) Shewanella sediminis HAW-EB3, co... 85 8e-15
CP000117_1561(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 85 1e-14
EU400157_7(EU400157|pid:none) Pseudomonas fluorescens strain CHA... 85 1e-14
CP000776_604(CP000776|pid:none) Campylobacter hominis ATCC BAA-3... 85 1e-14
CP000474_3097(CP000474|pid:none) Arthrobacter aurescens TC1, com... 85 1e-14
CP000821_2859(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 85 1e-14
CP001322_3894(CP001322|pid:none) Desulfatibacillum alkenivorans ... 85 1e-14
CP001089_944(CP001089|pid:none) Geobacter lovleyi SZ, complete g... 85 1e-14
CP000934_359(CP000934|pid:none) Cellvibrio japonicus Ueda107, co... 85 1e-14
CR522870_359(CR522870|pid:none) Desulfotalea psychrophila LSv54 ... 85 1e-14
AE013598_507(AE013598|pid:none) Xanthomonas oryzae pv. oryzae KA... 85 1e-14
BA000032_1229(BA000032|pid:none) Vibrio parahaemolyticus RIMD 22... 84 1e-14
CP001108_1854(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 84 1e-14
CP000447_2790(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 84 1e-14
AC116979_9(AC116979|pid:none) Dictyostelium discoideum chromosom... 84 1e-14
CP000302_1670(CP000302|pid:none) Shewanella denitrificans OS217,... 84 1e-14
CP000930_2672(CP000930|pid:none) Heliobacterium modesticaldum Ic... 84 1e-14
AC007069_2(AC007069|pid:none) Arabidopsis thaliana chromosome 2 ... 84 1e-14
AB046871_1(AB046871|pid:none) Arabidopsis thaliana AHK4 mRNA for... 84 1e-14
BX842647_202(BX842647|pid:none) Bdellovibrio bacteriovorus compl... 84 1e-14
CP000388_2527(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 84 1e-14
AM286690_1598(AM286690|pid:none) Alcanivorax borkumensis SK2, co... 84 2e-14
CP000089_2861(CP000089|pid:none) Dechloromonas aromatica RCB, co... 84 2e-14
AB2276(AB2276) two-component hybrid sensor and regulator alr3761... 84 2e-14
CP000509_1083(CP000509|pid:none) Nocardioides sp. JS614, complet... 84 2e-14
AM920433_535(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 84 2e-14
BX842653_126(BX842653|pid:none) Bdellovibrio bacteriovorus compl... 84 2e-14
CP000926_4845(CP000926|pid:none) Pseudomonas putida GB-1, comple... 84 2e-14
CP000449_2190(CP000449|pid:none) Maricaulis maris MCS10, complet... 84 2e-14
CP001337_3636(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 84 2e-14
CP001032_3821(CP001032|pid:none) Opitutus terrae PB90-1, complet... 84 2e-14
FM209186_5241(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 84 2e-14
(Q9P7Q7) RecName: Full=Peroxide stress-activated histidine kinas... 84 2e-14
EU078178_1(EU078178|pid:none) Brassica rapa subsp. pekinensis hy... 84 2e-14
CP000612_2110(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 84 2e-14
AE004091_4852(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 84 2e-14
AB049935_1(AB049935|pid:none) Arabidopsis thaliana mRNA for cyto... 84 2e-14
CP000115_119(CP000115|pid:none) Nitrobacter winogradskyi Nb-255,... 84 2e-14
CP001089_2370(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 84 2e-14
DQ848998_1(DQ848998|pid:none) Lotus japonicus histidine kinase 2... 84 2e-14
CP000155_934(CP000155|pid:none) Hahella chejuensis KCTC 2396, co... 84 2e-14
CP000744_2305(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 84 2e-14
CP000438_5167(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 84 2e-14
CP001576_164(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 83 3e-14
AM286690_2018(AM286690|pid:none) Alcanivorax borkumensis SK2, co... 83 3e-14
FP312986_10(FP312986|pid:none) uncultured bacterial clone mtbu93... 83 3e-14
(Q54SK5) RecName: Full=Hybrid signal transduction histidine kina... 83 3e-14
CP001322_2004(CP001322|pid:none) Desulfatibacillum alkenivorans ... 83 3e-14
AP007255_3438(AP007255|pid:none) Magnetospirillum magneticum AMB... 83 3e-14
AP009389_142(AP009389|pid:none) Pelotomaculum thermopropionicum ... 83 3e-14
CP001101_2026(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 83 3e-14
AE016825_882(AE016825|pid:none) Chromobacterium violaceum ATCC 1... 83 3e-14
CU207211_836(CU207211|pid:none) Herminiimonas arsenicoxydans chr... 83 3e-14
AB095750_1(AB095750|pid:none) Cochliobolus heterostrophus Bmhk1 ... 83 4e-14
CP000075_3611(CP000075|pid:none) Pseudomonas syringae pv. syring... 83 4e-14
AB095751_1(AB095751|pid:none) Cochliobolus heterostrophus Bmhk1 ... 83 4e-14
EU583460_1(EU583460|pid:none) Populus trichocarpa cytokinin rece... 83 4e-14
EF176598_1(EF176598|pid:none) Pseudomonas fluorescens strain T22... 83 4e-14
AY456023_1(AY456023|pid:none) Cochliobolus heterostrophus putati... 83 4e-14
CP000116_987(CP000116|pid:none) Thiobacillus denitrificans ATCC ... 83 4e-14
FM954972_1062(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 83 4e-14
AB095748_1(AB095748|pid:none) Cochliobolus heterostrophus Bmhk1 ... 83 4e-14
AB095749_1(AB095749|pid:none) Cochliobolus heterostrophus Bmhk1 ... 83 4e-14
CP000482_1412(CP000482|pid:none) Pelobacter propionicus DSM 2379... 83 4e-14
AY456041_1(AY456041|pid:none) Gibberella moniliformis putative h... 82 5e-14
CP000500_408(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 82 5e-14
CP000269_858(CP000269|pid:none) Janthinobacterium sp. Marseille,... 82 5e-14
CP000471_3232(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 82 5e-14
AB041647_1(AB041647|pid:none) Magnaporthe grisea Hik1 gene for h... 82 5e-14
CP000859_1540(CP000859|pid:none) Desulfococcus oleovorans Hxd3, ... 82 5e-14
CP000350_1478(CP000350|pid:none) Leptospira borgpetersenii serov... 82 5e-14
CP000789_1817(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 82 5e-14
CP000058_3459(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 82 5e-14
CP000140_490(CP000140|pid:none) Parabacteroides distasonis ATCC ... 82 5e-14
CP000140_740(CP000140|pid:none) Parabacteroides distasonis ATCC ... 82 5e-14
CP000140_602(CP000140|pid:none) Parabacteroides distasonis ATCC ... 82 5e-14
CP000348_1696(CP000348|pid:none) Leptospira borgpetersenii serov... 82 5e-14
CP000239_2695(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 82 7e-14
AB206390_1(AB206390|pid:none) Zea mays ZmHK1a2 mRNA for histidin... 82 7e-14
GN101344_1(GN101344|pid:none) Sequence 6125 from Patent WO200903... 82 7e-14
CP000471_459(CP000471|pid:none) Magnetococcus sp. MC-1, complete... 82 7e-14
EU583461_1(EU583461|pid:none) Populus trichocarpa cytokinin rece... 82 7e-14
CP000103_1550(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 82 7e-14
CP000462_395(CP000462|pid:none) Aeromonas hydrophila subsp. hydr... 82 7e-14
AM286690_442(AM286690|pid:none) Alcanivorax borkumensis SK2, com... 82 7e-14
CP001154_1011(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 82 7e-14
CP000744_1653(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 82 7e-14
FM178380_1012(FM178380|pid:none) Aliivibrio salmonicida LFI1238 ... 82 9e-14
CP001124_518(CP001124|pid:none) Geobacter bemidjiensis Bem, comp... 82 9e-14
DQ887541_1(DQ887541|pid:none) Alternaria longipes strain K-10 tw... 82 9e-14
AY700092_1(AY700092|pid:none) Alternaria brassicicola strain Abr... 82 9e-14
CP000961_1032(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 82 9e-14
DQ887540_1(DQ887540|pid:none) Alternaria longipes strain M-10 tw... 82 9e-14
DQ887542_1(DQ887542|pid:none) Alternaria longipes strain W-01 tw... 82 9e-14
CQ802951_1(CQ802951|pid:none) Sequence 69 from Patent EP1415996. 82 9e-14
DQ887539_1(DQ887539|pid:none) Alternaria longipes strain S-10 tw... 82 9e-14
CP000509_1356(CP000509|pid:none) Nocardioides sp. JS614, complet... 82 9e-14
CP000961_823(CP000961|pid:none) Shewanella woodyi ATCC 51908, co... 82 9e-14
CP000786_395(CP000786|pid:none) Leptospira biflexa serovar Patoc... 82 9e-14
AY700098_1(AY700098|pid:none) Alternaria brassicicola strain Abr... 82 9e-14
CP000806_1136(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 82 9e-14
CP000473_5269(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 82 9e-14
CP000388_2089(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 82 9e-14
CP000744_1124(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 81 1e-13
CP001088_34(CP001088|pid:none) Desulfobacterium autotrophicum HR... 81 1e-13
CT573326_2234(CT573326|pid:none) Pseudomonas entomophila str. L4... 81 1e-13
AE016796_73(AE016796|pid:none) Vibrio vulnificus CMCP6 chromosom... 81 1e-13
CP000471_422(CP000471|pid:none) Magnetococcus sp. MC-1, complete... 81 1e-13
CP000089_4109(CP000089|pid:none) Dechloromonas aromatica RCB, co... 81 1e-13
CP000821_1379(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 81 1e-13
A87580(A87580) sensory box histidine kinase/response regulator [... 81 1e-13
CP001087_4453(CP001087|pid:none) Desulfobacterium autotrophicum ... 81 1e-13
CP001322_868(CP001322|pid:none) Desulfatibacillum alkenivorans A... 81 1e-13
BX294133_87(BX294133|pid:none) Rhodopirellula baltica SH 1 compl... 81 1e-13
(Q54YH4) RecName: Full=Hybrid signal transduction histidine kina... 81 2e-13
BX294151_191(BX294151|pid:none) Rhodopirellula baltica SH 1 comp... 81 2e-13
CP000438_2194(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 81 2e-13
AE017180_2302(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 81 2e-13
CP000509_1633(CP000509|pid:none) Nocardioides sp. JS614, complet... 81 2e-13
AF024654_1(AF024654|pid:none) Dictyostelium discoideum hybrid hi... 81 2e-13
AB121445_1(AB121445|pid:none) Zea mays ZmHK3b mRNA for histidine... 81 2e-13
CP001013_3348(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 81 2e-13
CP000749_352(CP000749|pid:none) Marinomonas sp. MWYL1, complete ... 81 2e-13
CP001028_140(CP001028|pid:none) Burkholderia ambifaria MC40-6 pl... 81 2e-13
CR382129_795(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 81 2e-13
CP000644_2119(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 80 2e-13
CP000386_1251(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 80 2e-13
CP000109_134(CP000109|pid:none) Thiomicrospira crunogena XCL-2, ... 80 2e-13
CP000471_2194(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 80 2e-13
AE017180_1276(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 80 2e-13
CP000076_4184(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 80 2e-13
CP000685_4676(CP000685|pid:none) Flavobacterium johnsoniae UW101... 80 2e-13
CP000386_2599(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 80 2e-13
BA000038_1472(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, ch... 80 3e-13
FM209186_1001(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 80 3e-13
BA000037_2081(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 80 3e-13
AY456010_1(AY456010|pid:none) Cochliobolus heterostrophus putati... 80 3e-13
CP000094_3974(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 80 3e-13
AM286690_1627(AM286690|pid:none) Alcanivorax borkumensis SK2, co... 80 3e-13
BA000038_584(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, chr... 80 3e-13
CP001032_2159(CP001032|pid:none) Opitutus terrae PB90-1, complet... 80 3e-13
CP001197_1088(CP001197|pid:none) Desulfovibrio vulgaris str. 'Mi... 80 3e-13
CP000148_76(CP000148|pid:none) Geobacter metallireducens GS-15, ... 80 3e-13
AE004091_3973(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 80 3e-13
AF497627_1(AF497627|pid:none) Oryza sativa putative sensor kinas... 80 3e-13
CP000148_1688(CP000148|pid:none) Geobacter metallireducens GS-15... 80 3e-13
CP000438_1530(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 80 3e-13
CP000685_4213(CP000685|pid:none) Flavobacterium johnsoniae UW101... 80 3e-13
CP001087_1867(CP001087|pid:none) Desulfobacterium autotrophicum ... 80 3e-13
CP000607_366(CP000607|pid:none) Chlorobium phaeovibrioides DSM 2... 80 3e-13
CP000472_1341(CP000472|pid:none) Shewanella piezotolerans WP3, c... 80 3e-13
CP000644_3659(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 80 3e-13
CP000323_2461(CP000323|pid:none) Psychrobacter cryohalolentis K5... 80 3e-13
AE016796_912(AE016796|pid:none) Vibrio vulnificus CMCP6 chromoso... 80 3e-13
CP000462_2361(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 80 3e-13
CP000473_1725(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 80 3e-13
AM286690_1853(AM286690|pid:none) Alcanivorax borkumensis SK2, co... 80 3e-13
CP000821_290(CP000821|pid:none) Shewanella sediminis HAW-EB3, co... 80 3e-13
CP000089_3519(CP000089|pid:none) Dechloromonas aromatica RCB, co... 80 3e-13
T47214(T47214) nik-1 protein [imported] - Neurospora crassa (fra... 79 4e-13
CP000961_4594(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 79 4e-13
AP008208_2483(AP008208|pid:none) Oryza sativa (japonica cultivar... 79 4e-13
CP000112_544(CP000112|pid:none) Desulfovibrio desulfuricans G20,... 79 4e-13
CP000606_458(CP000606|pid:none) Shewanella loihica PV-4, complet... 79 4e-13
CP000926_3718(CP000926|pid:none) Pseudomonas putida GB-1, comple... 79 4e-13
CP000250_3946(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 79 4e-13
CP000089_4053(CP000089|pid:none) Dechloromonas aromatica RCB, co... 79 4e-13
T18360(T18360) Os-1p - Neurospora crassa &U53189_1(U53189|pid:n... 79 4e-13
FM209186_1030(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 79 4e-13
CP000959_1434(CP000959|pid:none) Burkholderia cenocepacia MC0-3 ... 79 4e-13
AP005112_4(AP005112|pid:none) Oryza sativa Japonica Group genomi... 79 4e-13
CP000774_3570(CP000774|pid:none) Parvibaculum lavamentivorans DS... 79 4e-13
CP000383_3037(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 79 4e-13
CP000471_2917(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 79 4e-13
CP000606_1197(CP000606|pid:none) Shewanella loihica PV-4, comple... 79 4e-13
A87630(A87630) sensor histidine kinase/response regulator [impor... 79 6e-13
CP001281_2663(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 79 6e-13
CP001103_2480(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 79 6e-13
CP001087_4288(CP001087|pid:none) Desulfobacterium autotrophicum ... 79 6e-13
CP000471_1578(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 79 6e-13
CP000447_3468(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 79 6e-13
CP001089_2925(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 79 6e-13
GN101340_1(GN101340|pid:none) Sequence 6121 from Patent WO200903... 79 6e-13
CP000446_480(CP000446|pid:none) Shewanella sp. MR-4, complete ge... 79 6e-13
CP001037_2423(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 79 6e-13
FM209186_2241(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 79 6e-13
CP001157_1493(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 79 6e-13
CP000606_905(CP000606|pid:none) Shewanella loihica PV-4, complet... 79 6e-13
CP000113_2251(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 79 8e-13
CQ802924_1(CQ802924|pid:none) Sequence 42 from Patent EP1415996. 79 8e-13
AE017180_2561(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 79 8e-13
CP000159_470(CP000159|pid:none) Salinibacter ruber DSM 13855, co... 79 8e-13
CP000961_1029(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 79 8e-13
CP000089_2862(CP000089|pid:none) Dechloromonas aromatica RCB, co... 79 8e-13
CT573326_1450(CT573326|pid:none) Pseudomonas entomophila str. L4... 79 8e-13
EF157661_1(EF157661|pid:none) Clavispora lusitaniae histidine ki... 79 8e-13
CP000089_934(CP000089|pid:none) Dechloromonas aromatica RCB, com... 79 8e-13
CP001340_758(CP001340|pid:none) Caulobacter crescentus NA1000, c... 79 8e-13
CP000388_2644(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 79 8e-13
AE005673_720(AE005673|pid:none) Caulobacter crescentus CB15, com... 79 8e-13
CP001157_3380(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 79 8e-13
CP000091_1870(CP000091|pid:none) Ralstonia eutropha JMP134 chrom... 79 8e-13
AP009178_1346(AP009178|pid:none) Nitratiruptor sp. SB155-2 genom... 78 1e-12
FM954973_1039(FM954973|pid:none) Vibrio splendidus LGP32 chromos... 78 1e-12
CP000076_1084(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 78 1e-12
AM270038_44(AM270038|pid:none) Aspergillus niger contig An02c044... 78 1e-12
CT573326_3487(CT573326|pid:none) Pseudomonas entomophila str. L4... 78 1e-12
CP001277_142(CP001277|pid:none) Candidatus Hamiltonella defensa ... 78 1e-12
AE015451_1860(AE015451|pid:none) Pseudomonas putida KT2440 compl... 78 1e-12
FM178380_307(FM178380|pid:none) Aliivibrio salmonicida LFI1238 c... 78 1e-12
AM747721_2768(AM747721|pid:none) Burkholderia cenocepacia J2315 ... 78 1e-12
CP000510_948(CP000510|pid:none) Psychromonas ingrahamii 37, comp... 78 1e-12
CP001032_3902(CP001032|pid:none) Opitutus terrae PB90-1, complet... 78 1e-12
CP000949_1483(CP000949|pid:none) Pseudomonas putida W619, comple... 78 1e-12
CP000568_799(CP000568|pid:none) Clostridium thermocellum ATCC 27... 78 1e-12
AJ628045_1(AJ628045|pid:none) Cucurbita maxima mRNA for putative... 78 1e-12
FN393561_1(FN393561|pid:none) Claviceps purpurea hk1 gene for hi... 78 1e-12
CP000926_2510(CP000926|pid:none) Pseudomonas putida GB-1, comple... 78 1e-12
BA000022_478(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA, ... 78 1e-12
CP000471_2609(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 78 1e-12
CP001103_1563(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 78 1e-12
CP001233_1283(CP001233|pid:none) Vibrio cholerae M66-2 chromosom... 78 1e-12
CR382131_131(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 78 1e-12
CP000362_336(CP000362|pid:none) Roseobacter denitrificans OCh 11... 78 1e-12
CP000931_3753(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 78 1e-12
FJ611781_1(FJ611781|pid:none) Arthrospira platensis FACHB869 GAF... 78 1e-12
CP000492_596(CP000492|pid:none) Chlorobium phaeobacteroides DSM ... 78 1e-12
CP000627_937(CP000627|pid:none) Vibrio cholerae O395 chromosome ... 78 1e-12
CU459003_3116(CU459003|pid:none) Magnetospirillum gryphiswaldens... 78 1e-12
CP001101_880(CP001101|pid:none) Chlorobium phaeobacteroides BS1,... 78 1e-12
AP007255_650(AP007255|pid:none) Magnetospirillum magneticum AMB-... 77 2e-12
CP000471_773(CP000471|pid:none) Magnetococcus sp. MC-1, complete... 77 2e-12
CP000089_2725(CP000089|pid:none) Dechloromonas aromatica RCB, co... 77 2e-12
BT066886_1(BT066886|pid:none) Zea mays full-length cDNA clone ZM... 77 2e-12
AH2090(AH2090) two-component hybrid sensor and regulator alr2279... 77 2e-12
AB042270_1(AB042270|pid:none) Zea mays ZmHK1 mRNA for histidine ... 77 2e-12
A87648(A87648) sensor histidine kinase/response regulator [impor... 77 2e-12
CP000142_3124(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 77 2e-12
CP000777_1461(CP000777|pid:none) Leptospira biflexa serovar Pato... 77 2e-12
CP000377_221(CP000377|pid:none) Silicibacter sp. TM1040, complet... 77 2e-12
DQ831224_2(DQ831224|pid:none) Heliobacillus mobilis sporulation ... 77 2e-12
CT573071_1539(CT573071|pid:none) Kuenenia stuttgartiensis genome... 77 2e-12
CS611811_1(CS611811|pid:none) Sequence 30 from Patent WO20060578... 77 2e-12
CP000949_1618(CP000949|pid:none) Pseudomonas putida W619, comple... 77 2e-12
CP000148_2611(CP000148|pid:none) Geobacter metallireducens GS-15... 77 2e-12
CP000075_3697(CP000075|pid:none) Pseudomonas syringae pv. syring... 77 2e-12
CP000885_2807(CP000885|pid:none) Clostridium phytofermentans ISD... 77 2e-12
CP000976_404(CP000976|pid:none) Borrelia duttonii Ly, complete g... 77 2e-12
CP000510_465(CP000510|pid:none) Psychromonas ingrahamii 37, comp... 77 2e-12
AF435964_1(AF435964|pid:none) Botryotinia fuckeliana two-compone... 77 2e-12
(P48027) RecName: Full=Sensor protein gacS; EC=2.7.13.3... 77 2e-12
CP000112_533(CP000112|pid:none) Desulfovibrio desulfuricans G20,... 77 2e-12
AM270398_13(AM270398|pid:none) Aspergillus niger contig An18c005... 77 2e-12
BA000022_1414(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 77 2e-12
EU583455_1(EU583455|pid:none) Betula pendula cytokinin receptor ... 77 2e-12
AL954747_49(AL954747|pid:none) Nitrosomonas europaea ATCC 19718,... 77 2e-12
CP000680_828(CP000680|pid:none) Pseudomonas mendocina ymp, compl... 77 2e-12
CP000448_360(CP000448|pid:none) Syntrophomonas wolfei subsp. wol... 77 2e-12
DQ400808_1(DQ400808|pid:none) Yersinia sp. MH-1 insecticidal tox... 77 2e-12
AP007255_1841(AP007255|pid:none) Magnetospirillum magneticum AMB... 77 2e-12
DQ517299_1(DQ517299|pid:none) Monilinia fructicola isolate Mf-KA... 77 2e-12
CP000471_3150(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 77 2e-12
CP001097_1999(CP001097|pid:none) Chlorobium limicola DSM 245, co... 77 2e-12
EF672107_1(EF672107|pid:none) Botryotinia fuckeliana strain XY6-... 77 2e-12
BX842655_205(BX842655|pid:none) Bdellovibrio bacteriovorus compl... 77 3e-12
FN392322_325(FN392322|pid:none) Pichia pastoris GS115 chromosome... 77 3e-12
CP000089_1431(CP000089|pid:none) Dechloromonas aromatica RCB, co... 77 3e-12
CP000931_2542(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 77 3e-12
U59310_1(U59310|pid:none) Nectria haematococca histidine kinase ... 77 3e-12
AY456068_1(AY456068|pid:none) Botryotinia fuckeliana M4GKp (M4GK... 77 3e-12
CP000943_5088(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 77 3e-12
T29109(T29109) histidine kinase FIK - fungus (Nectria haematococ... 77 3e-12
CP000230_2028(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 77 3e-12
CP001097_1873(CP001097|pid:none) Chlorobium limicola DSM 245, co... 77 3e-12
CP000117_4667(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 77 3e-12
CP001089_376(CP001089|pid:none) Geobacter lovleyi SZ, complete g... 77 3e-12
CP000472_545(CP000472|pid:none) Shewanella piezotolerans WP3, co... 77 3e-12
CP000469_3988(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 77 3e-12
CP000949_3473(CP000949|pid:none) Pseudomonas putida W619, comple... 77 3e-12
CP001344_1973(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 77 3e-12
AE003852_1329(AE003852|pid:none) Vibrio cholerae O1 biovar eltor... 77 3e-12
AE017285_2603(AE017285|pid:none) Desulfovibrio vulgaris subsp. v... 76 4e-12
BT042590_1(BT042590|pid:none) Zea mays full-length cDNA clone ZM... 76 4e-12
CP001028_139(CP001028|pid:none) Burkholderia ambifaria MC40-6 pl... 76 4e-12
CP000395_425(CP000395|pid:none) Borrelia afzelii PKo, complete g... 76 4e-12
CR380954_279(CR380954|pid:none) Candida glabrata strain CBS138 c... 76 4e-12
CP000721_2137(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 76 4e-12
CP000680_1898(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 76 4e-12
CP001013_1441(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 76 4e-12
CP000304_2616(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 76 4e-12
CU694391_218(CU694391|pid:none) Ralstonia solanacearum strain Mo... 76 4e-12
CP000961_3323(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 76 4e-12
AF517688_1(AF517688|pid:none) Pseudomonas chlororaphis two-compo... 76 4e-12
CU914168_2823(CU914168|pid:none) Ralstonia solanacearum strain I... 76 4e-12
CP000492_2080(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 76 5e-12
CP000712_1965(CP000712|pid:none) Pseudomonas putida F1, complete... 76 5e-12
CP000471_3203(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 76 5e-12
FM992695_91(FM992695|pid:none) Candida dubliniensis CD36 chromos... 76 5e-12
FP312977_25(FP312977|pid:none) uncultured bacterial clone mtbe21... 76 5e-12
AF246292_1(AF246292|pid:none) Pseudomonas fluorescens sensor kin... 76 5e-12
BX842646_273(BX842646|pid:none) Bdellovibrio bacteriovorus compl... 76 5e-12
CP000544_365(CP000544|pid:none) Halorhodospira halophila SL1, co... 76 5e-12
CP000926_2127(CP000926|pid:none) Pseudomonas putida GB-1, comple... 76 5e-12
AE016853_1655(AE016853|pid:none) Pseudomonas syringae pv. tomato... 76 5e-12
CP001074_3326(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 76 5e-12
L30101_1(L30101|pid:none) Pseudomonas viridiflava pectate lyase ... 76 5e-12
CP000089_970(CP000089|pid:none) Dechloromonas aromatica RCB, com... 75 6e-12
CP000821_139(CP000821|pid:none) Shewanella sediminis HAW-EB3, co... 75 6e-12
CP000153_615(CP000153|pid:none) Sulfurimonas denitrificans DSM 1... 75 6e-12
AP008216_430(AP008216|pid:none) Oryza sativa (japonica cultivar-... 75 6e-12
AE017180_1916(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 75 6e-12
CP001103_2652(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 75 6e-12
DQ180352_6(DQ180352|pid:none) Vibrio cholerae integrating conjug... 75 6e-12
AE004091_930(AE004091|pid:none) Pseudomonas aeruginosa PAO1, com... 75 6e-12
CP000048_402(CP000048|pid:none) Borrelia hermsii DAH, complete g... 75 6e-12
AE010300_3992(AE010300|pid:none) Leptospira interrogans serovar ... 75 6e-12
DQ973528_1(DQ973528|pid:none) Lentinula edodes histidine kinase ... 75 6e-12
CP000076_1712(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 75 6e-12
CP000744_4534(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 75 6e-12
CU928179_268(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 75 6e-12
AB046869_1(AB046869|pid:none) Arabidopsis thaliana AHK2 mRNA for... 75 6e-12
CP000749_1075(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 75 8e-12
CP000471_2637(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 75 8e-12
FN392320_168(FN392320|pid:none) Pichia pastoris GS115 chromosome... 75 8e-12
CP001147_178(CP001147|pid:none) Thermodesulfovibrio yellowstonii... 75 8e-12
CP000083_4382(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 75 8e-12
CP001089_1525(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 75 8e-12
CP000959_1490(CP000959|pid:none) Burkholderia cenocepacia MC0-3 ... 75 8e-12
BA000022_1307(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 75 1e-11
AE016823_1394(AE016823|pid:none) Leptospira interrogans serovar ... 75 1e-11
CP000890_742(CP000890|pid:none) Coxiella burnetii RSA 331, compl... 75 1e-11
CP000471_3649(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 75 1e-11
AE016853_2173(AE016853|pid:none) Pseudomonas syringae pv. tomato... 75 1e-11
CP001019_834(CP001019|pid:none) Coxiella burnetii CbuG_Q212, com... 75 1e-11
AE010300_2540(AE010300|pid:none) Leptospira interrogans serovar ... 75 1e-11
CP000089_2782(CP000089|pid:none) Dechloromonas aromatica RCB, co... 75 1e-11
AM286690_972(AM286690|pid:none) Alcanivorax borkumensis SK2, com... 75 1e-11
CP000143_2969(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c... 75 1e-11
CP000563_3092(CP000563|pid:none) Shewanella baltica OS155, compl... 75 1e-11
CP000089_3841(CP000089|pid:none) Dechloromonas aromatica RCB, co... 75 1e-11
CP001344_3494(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 75 1e-11
CP000463_360(CP000463|pid:none) Rhodopseudomonas palustris BisA5... 75 1e-11
AY456035_1(AY456035|pid:none) Gibberella moniliformis putative h... 75 1e-11
CP000644_2579(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 75 1e-11
CP000733_1070(CP000733|pid:none) Coxiella burnetii Dugway 5J108-... 75 1e-11
CP001068_743(CP001068|pid:none) Ralstonia pickettii 12J chromoso... 75 1e-11
CP001197_2254(CP001197|pid:none) Desulfovibrio vulgaris str. 'Mi... 74 1e-11
CP001575_365(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 74 1e-11
CP000471_1199(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 74 1e-11
CT573326_2969(CT573326|pid:none) Pseudomonas entomophila str. L4... 74 1e-11
CP001150_2756(CP001150|pid:none) Rhodobacter sphaeroides KD131 c... 74 1e-11
CP000503_639(CP000503|pid:none) Shewanella sp. W3-18-1, complete... 74 1e-11
CP001089_566(CP001089|pid:none) Geobacter lovleyi SZ, complete g... 74 1e-11
CP000851_1178(CP000851|pid:none) Shewanella pealeana ATCC 700345... 74 1e-11
CS611785_1(CS611785|pid:none) Sequence 4 from Patent WO2006057832. 74 1e-11
CP001196_397(CP001196|pid:none) Oligotropha carboxidovorans OM5 ... 74 1e-11
AP007255_1110(AP007255|pid:none) Magnetospirillum magneticum AMB... 74 1e-11
CP000282_2236(CP000282|pid:none) Saccharophagus degradans 2-40, ... 74 2e-11
CP000577_25(CP000577|pid:none) Rhodobacter sphaeroides ATCC 1702... 74 2e-11
AE016825_2498(AE016825|pid:none) Chromobacterium violaceum ATCC ... 74 2e-11
CP000377_2773(CP000377|pid:none) Silicibacter sp. TM1040, comple... 74 2e-11
CP001103_1221(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 74 2e-11
AM746676_7789(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 74 2e-11
DQ400842_1(DQ400842|pid:none) Yersinia sp. MH-1 clone ye829 sign... 74 2e-11
CP000507_67(CP000507|pid:none) Shewanella amazonensis SB2B, comp... 74 2e-11
CP000021_1032(CP000021|pid:none) Vibrio fischeri ES114 chromosom... 74 2e-11
CP000089_3684(CP000089|pid:none) Dechloromonas aromatica RCB, co... 74 2e-11
CP000789_2207(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 74 2e-11
(Q54Q69) RecName: Full=Hybrid signal transduction histidine kina... 74 2e-11
CP000250_412(CP000250|pid:none) Rhodopseudomonas palustris HaA2,... 74 2e-11
CR543861_2770(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 74 2e-11
CP000469_2001(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 73 3e-11
CP000951_853(CP000951|pid:none) Synechococcus sp. PCC 7002, comp... 73 3e-11
CP001029_4838(CP001029|pid:none) Methylobacterium populi BJ001, ... 73 3e-11
DQ248962_1(DQ248962|pid:none) Oryza sativa Indica Group hybrid t... 73 3e-11
CP000949_2768(CP000949|pid:none) Pseudomonas putida W619, comple... 73 3e-11
FM209186_2711(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 73 3e-11
AB006363_1(AB006363|pid:none) Candida albicans CaNIK1 gene, comp... 73 3e-11
AY236957_2(AY236957|pid:none) Pseudomonas sp. PCL1171 response r... 73 3e-11
BA000031_1547(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22... 73 3e-11
AP004672_9(AP004672|pid:none) Oryza sativa Japonica Group genomi... 73 3e-11
BX842656_34(BX842656|pid:none) Bdellovibrio bacteriovorus comple... 73 3e-11
AL033396_7(AL033396|pid:none) C.albicans cosmid Ca35A5. &T18223... 73 3e-11
AY211488_1(AY211488|pid:none) Oryza sativa (indica cultivar-grou... 73 3e-11
T18258(T18258) histidine kinase - yeast (Candida albicans) &U69... 73 3e-11
AB219364_1(AB219364|pid:none) Pseudomonas fluorescens gacS gene ... 73 3e-11
CP000685_3897(CP000685|pid:none) Flavobacterium johnsoniae UW101... 73 3e-11
CP000388_2234(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 73 3e-11

>AF362375_1(AF362375|pid:none) Dictyostelium discoideum histidine
kinase DhkE (dhkE) gene, complete cds.
Length = 1699

Score = 200 bits (508), Expect = 2e-49
Identities = 94/137 (68%), Positives = 115/137 (83%)
Frame = +3

Query: 1458 DTPVLQPPAYRKKALIVEDNELNRKVLAQLFKKIDWTISFAENGREALKEITGERCFDIV 1637
+TP + P +R+ ALIV+D ELNRKVLAQL +++DW++SFAENG EALKEIT ERCFDI+
Sbjct: 1565 NTPPVTP--HRRNALIVDDTELNRKVLAQLLRRMDWSVSFAENGIEALKEITSERCFDII 1622

Query: 1638 FMDCQMPVLDGFQTTKIIRSKERENNWKRMNIVALSAGSSSSFVQDCLDSGMDSFMGKPI 1817
FMDCQMP+LDGF+TTK++R +E ENNWK +NIVALSA SSSSF Q C D GM+ ++GKPI
Sbjct: 1623 FMDCQMPILDGFETTKLLRLRELENNWKPLNIVALSADSSSSFGQVCFDCGMNGYLGKPI 1682

Query: 1818 TLATLKDALAKWGGYNN 1868
TL TLKD L KWGGY +
Sbjct: 1683 TLITLKDTLLKWGGYRD 1699

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,552,095,775
Number of extensions: 47143975
Number of successful extensions: 121890
Number of sequences better than 10.0: 7542
Number of HSP's gapped: 117684
Number of HSP's successfully gapped: 7763
Length of query: 643
Length of database: 1,040,966,779
Length adjustment: 135
Effective length of query: 508
Effective length of database: 608,388,304
Effective search space: 309061258432
Effective search space used: 309061258432
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.83 gvh: 0.41 alm: 0.28 top: 0.37 tms: 0.07 mit: 0.34 mip: 0.03
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.03 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 1.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

24.0 %: mitochondrial
24.0 %: endoplasmic reticulum
20.0 %: cytoplasmic
16.0 %: nuclear
8.0 %: plasma membrane
4.0 %: Golgi
4.0 %: vesicles of secretory system

>> prediction for Contig-U11414-1 is mit

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 1
AF (FL, S) 2
SL (DIR, L) 2
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0