| Contig-U11411-1 |
| Contig ID |
Contig-U11411-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1508 |
| Chromosome number (1..6, M) |
6 |
| Chromosome length |
3595308 |
| Start point |
507996 |
| End point |
509501 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
6 |
| Number of EST |
9 |
| Link to clone list |
U11411 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.24 |
| Homology vs DNA |
Query= Contig-U11411-1 (Contig-U11411-1Q) /CSM_Contig/Contig-U11411-1Q.Seq.d
(1518 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ386093) Dictyostelium discoideum cDNA clone:ddc57j06, 3' ... 1324 0.0 2
(BJ352537) Dictyostelium discoideum cDNA clone:dda47g06, 3' ... 1213 0.0 1
(BJ355053) Dictyostelium discoideum cDNA clone:dda55i15, 3' ... 1114 0.0 1
(BJ353229) Dictyostelium discoideum cDNA clone:dda49m07, 3' ... 1019 0.0 1
(BJ443062) Dictyostelium discoideum cDNA clone:ddv51d23, 3' ... 959 0.0 1
(BJ335227) Dictyostelium discoideum cDNA clone:dda49m07, 5' ... 634 0.0 2
(AU062073) Dictyostelium discoideum slug cDNA, clone SLH475. 626 e-175 1
(AU040027) Dictyostelium discoideum slug cDNA, clone SLH475. 626 e-175 1
(BJ371220) Dictyostelium discoideum cDNA clone:ddc57j06, 5' ... 383 e-163 2
(DY889622) CeleSEQ11561 Cunninghamella elegans pBluescript (... 40 3e-08 5
(DY887646) CeleSEQ4172 Cunninghamella elegans pBluescript (E... 40 4e-08 5
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 38 0.002 7
(AC096136) Rattus norvegicus clone CH230-11D12, *** SEQUENCI... 38 0.011 2
(AC121445) Rattus norvegicus clone CH230-171L2, *** SEQUENCI... 38 0.011 2
(AC136253) Rattus norvegicus clone CH230-32F8, WORKING DRAFT... 38 0.011 2
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 36 0.030 9
(AC116551) Dictyostelium discoideum chromosome 2 map complem... 40 0.032 3
(AL439461) T3 end of clone BD0AA004G01 of library BD0AA from... 46 0.033 2
(CR382399) Plasmodium falciparum chromosome 6, complete sequ... 38 0.060 7
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 40 0.12 7
(AJ857199) Brassica rapa subsp. pekinensis GSS, clone KBrH05... 34 0.20 3
(CU468731) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.25 1
(AC179935) Strongylocentrotus purpuratus clone R3-3031N19, W... 50 0.25 1
(AC179402) Strongylocentrotus purpuratus clone R3-60N17, WOR... 50 0.25 1
(AC176931) Strongylocentrotus purpuratus clone R3-33K8, WORK... 50 0.25 1
(AC175953) Strongylocentrotus purpuratus clone R3-17D21, WOR... 50 0.25 1
(DX309788) OR_ABa0222I07.f OR_ABa Oryza ridleyi genomic clon... 50 0.25 1
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 40 0.44 7
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 34 0.50 23
(CD524438) kw05a03.y1 Strongyloides ratti PA female naive pA... 36 0.53 2
(AC095343) Rattus norvegicus clone CH230-21M18, WORKING DRAF... 36 0.53 2
(AC141217) Rattus norvegicus clone CH230-411F22, WORKING DRA... 34 0.54 2
(L77117) Methanocaldococcus jannaschii DSM 2661, complete ge... 36 0.69 16
(BM880141) ku05f04.y1 Strongyloides ratti PA female naive pA... 36 0.71 2
(CU462931) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 0.78 5
(CD524453) kw09b01.y1 Strongyloides ratti PA female naive pA... 36 0.78 2
(V00696) Yeast (S. cerevisiae) mitochondrial gene for cytoch... 40 0.80 3
(AC179173) Strongylocentrotus purpuratus clone R3-4016J6, WO... 40 0.82 7
(CB097698) ku44a05.y1 Strongyloides ratti PA female naive pA... 36 0.84 2
(CD525398) kw15c06.y1 Strongyloides ratti PA female naive pA... 36 0.91 2
(CD524554) kw05g09.y1 Strongyloides ratti PA female naive pA... 36 0.92 2
(CZ435215) OA_BBa0084I02.f OA_BBa Oryza alta genomic clone O... 42 0.94 2
(CR848760) Zebrafish DNA sequence from clone DKEYP-122A11 in... 48 0.98 1
(AL732415) Zebrafish DNA sequence from clone BUSM1-106A20 in... 48 0.98 1
(AC164120) Mus musculus BAC clone RP24-289J17 from chromosom... 48 0.98 1
(Z75099) S.cerevisiae chromosome XV reading frame ORF YOR191w. 48 0.98 1
(DJ208051) Method for identification of useful proteins deri... 48 0.98 1
(DJ025883) Genome-wide DNA marker of Saccharomyces cerevisiae. 48 0.98 1
(AC160579) Bos taurus clone CH240-84B24, WORKING DRAFT SEQUE... 48 0.98 1
(EK433976) 1095518004352 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.98 1
(CN076041) EC2BBA11BB10.b1 Xenopus tropicalis xtbs plasmid l... 48 0.98 1
(EY369922) CAXA12624.fwd CAXA Helobdella robusta Subtracted ... 48 0.98 1
(AE017321) Wolbachia endosymbiont strain TRS of Brugia malay... 48 0.98 1
(CP000361) Arcobacter butzleri RM4018, complete genome. 42 1.0 22
(AC115683) Dictyostelium discoideum chromosome 2 map complem... 32 1.1 7
(AM626604) Entamoeba dispar GSS, clone dispar12f08.q1k. 42 1.4 2
(FC818937) Sr_pAMT7_013g02_T7 S. ratti mixed stage pAMP Stro... 36 1.4 2
(FC819025) Sr_pAMT7_013k04_T7 S. ratti mixed stage pAMP Stro... 36 1.4 2
(AC129754) Rattus norvegicus clone CH230-95M12, *** SEQUENCI... 36 1.9 2
(AC131987) Mus musculus chromosome 13, clone RP24-184L10, co... 36 2.0 2
(AC182145) Bos taurus clone CH240-489C6, WORKING DRAFT SEQUE... 32 2.0 2
(AC155302) Mus musculus BAC clone RP24-227A11 from chromosom... 36 2.0 2
(AC118209) Mus musculus clone RP24-566J22, WORKING DRAFT SEQ... 36 2.0 2
(AC118311) Rattus norvegicus clone CH230-470A13, *** SEQUENC... 36 2.0 2
(AC146586) Medicago truncatula chromosome 8 clone mth2-71m12... 34 2.0 2
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 36 2.1 2
(AC231347) Medicago truncatula clone mth2-106e14, WORKING DR... 34 2.1 2
(AL844509) Plasmodium falciparum chromosome 13. 40 2.2 9
(BJ390525) Dictyostelium discoideum cDNA clone:dds22a24, 5' ... 38 2.6 2
(CC504713) CH240_344L22.T7 CHORI-240 Bos taurus genomic clon... 32 2.6 2
(AZ965975) 2M0236I13F Mouse 10kb plasmid UUGC2M library Mus ... 36 2.6 2
(CV917180) PG012B3 sporangia, germinating Phytophthora infes... 36 2.7 2
(FE744659) CAYC2476.b1 CAYC Petrolisthes cinctipes heart, ne... 32 2.7 2
(BP122453) Bombyx mori cDNA, clone:ceN-6250, 5' end sequence. 36 3.2 3
(CU633173) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 3.4 5
(CU640457) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 3.5 8
(AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5... 34 3.5 12
(Z97337) Arabidopsis thaliana DNA chromosome 4, ESSA I FCA c... 38 3.5 7
(AZ015010) RPCI-23-366E22.TV RPCI-23 Mus musculus genomic cl... 36 3.5 2
(AQ983668) RPCI-23-323J15.TJ RPCI-23 Mus musculus genomic cl... 36 3.6 2
(AZ288404) RPCI-23-144M20.TJ RPCI-23 Mus musculus genomic cl... 36 3.8 2
(BV322919) S236P6492FE1.T0 AlaskanMalamute Canis familiaris ... 46 3.9 1
(AC159067) Bos taurus clone CH240-49P6, WORKING DRAFT SEQUEN... 46 3.9 1
(AC216780) Procavia capensis clone CH280-190P19, WORKING DRA... 46 3.9 1
(AC179710) Strongylocentrotus purpuratus clone R3-1021H20, W... 46 3.9 1
(DX531390) GH_MBb0035O23f GH_MBb Gossypium hirsutum genomic ... 46 3.9 1
(DX293459) OR_ABa0198E24.r OR_ABa Oryza ridleyi genomic clon... 46 3.9 1
(DX287263) OR_ABa0189F14.r OR_ABa Oryza ridleyi genomic clon... 46 3.9 1
(DX242445) OR_ABa0126O24.f OR_ABa Oryza ridleyi genomic clon... 46 3.9 1
(DX231335) OR_ABa0111L12.r OR_ABa Oryza ridleyi genomic clon... 46 3.9 1
(DX214563) OR_ABa0088K18.r OR_ABa Oryza ridleyi genomic clon... 46 3.9 1
(CE227007) tigr-gss-dog-17000333238641 Dog Library Canis lup... 46 3.9 1
(BZ510658) BOMQB75TF BO_2_3_KB Brassica oleracea genomic clo... 46 3.9 1
(BZ469703) BONDF68TR BO_1.6_2_KB_tot Brassica oleracea genom... 46 3.9 1
(DK326304) Drosophila sechellia mRNA, adult full-length cDNA... 46 3.9 1
(DB860540) Lipochromis sp. 'matumbi hunter' cDNA clone:hm732... 46 3.9 1
(FM013144) Dicentrarchus labrax EST, clone cDN28P0001B11, 5'... 46 3.9 1
(FK113906) XABT158109.g1 Gateway compatible cien cDNA librar... 46 3.9 1
(FK096280) XABT146140.g1 Gateway compatible cien cDNA librar... 46 3.9 1
(FK070078) XABT129918.g1 Gateway compatible cien cDNA librar... 46 3.9 1
>(BJ386093) Dictyostelium discoideum cDNA clone:ddc57j06, 3' end,
single read.
Length = 726
Score = 1324 bits (668), Expect(2) = 0.0
Identities = 668/668 (100%)
Strand = Plus / Minus
Query: 773 gcttacaagtatattggcagtacgtgcattgggtgaaactgacattaatccagttagtgg 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gcttacaagtatattggcagtacgtgcattgggtgaaactgacattaatccagttagtgg 667
Query: 833 tattggtaaaatctctcaaattctattcgcagtcatttcaccaaagaatattttagcaaa 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tattggtaaaatctctcaaattctattcgcagtcatttcaccaaagaatattttagcaaa 607
Query: 893 tttagtagctggtgcaattgcagaaggtggttcccaacaagctggtgatatgatacaaga 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 tttagtagctggtgcaattgcagaaggtggttcccaacaagctggtgatatgatacaaga 547
Query: 953 tttaaaaactggtcatttaattaaagcttcaccacgtgtacaattctatggtcaattaat 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tttaaaaactggtcatttaattaaagcttcaccacgtgtacaattctatggtcaattaat 487
Query: 1013 tggttcattcttttcaatcattttcgctgttgcagcttatcaattatattcccatgccta 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tggttcattcttttcaatcattttcgctgttgcagcttatcaattatattcccatgccta 427
Query: 1073 cactataccatcagtggatggactacaggcaccaactgctgctgtttggttaaatatggc 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cactataccatcagtggatggactacaggcaccaactgctgctgtttggttaaatatggc 367
Query: 1133 taaattggttaatggtggagaattggctcataatgtattaccattttgtattgtattggg 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 taaattggttaatggtggagaattggctcataatgtattaccattttgtattgtattggg 307
Query: 1193 tgtattggtatcattaattccaattgctgaagcatttaatccaaatcttgaatattattt 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tgtattggtatcattaattccaattgctgaagcatttaatccaaatcttgaatattattt 247
Query: 1253 accaagtggtatcgctttagcaattggtttctatcaaactccaaattattcaatcgttag 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 accaagtggtatcgctttagcaattggtttctatcaaactccaaattattcaatcgttag 187
Query: 1313 agccattggtgcttttgttcaatggtattggtttagaaaaaatagtcattcatttagaga 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 agccattggtgcttttgttcaatggtattggtttagaaaaaatagtcattcatttagaga 127
Query: 1373 atatggtattatagttgcctctggtttcgttttaggtgaaggtataacttcaatttttac 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atatggtattatagttgcctctggtttcgttttaggtgaaggtataacttcaatttttac 67
Query: 1433 tgctataa 1440
||||||||
Sbjct: 66 tgctataa 59
Score = 28.2 bits (14), Expect(2) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 1442 gacaattactcatg 1455
||||||||||||||
Sbjct: 58 gacaattactcatg 45
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,511,552,562
Number of extensions: 97915188
Number of successful extensions: 11251876
Number of sequences better than 10.0: 138
Length of query: 1518
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1494
Effective length of database: 97,308,875,965
Effective search space: 145379460691710
Effective search space used: 145379460691710
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.30 |
| Homology vs Protein |
Query= Contig-U11411-1 (Contig-U11411-1Q) /CSM_Contig/Contig-U11411-1Q.Seq.d
(1518 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE017346_248(AE017346|pid:none) Cryptococcus neoformans var. neo... 231 4e-59
FN392320_646(FN392320|pid:none) Pichia pastoris GS115 chromosome... 223 1e-56
CR382134_315(CR382134|pid:none) Debaryomyces hansenii strain CBS... 221 7e-56
CP000497_252(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 219 2e-55
CR380952_297(CR380952|pid:none) Candida glabrata strain CBS138 c... 216 1e-54
DQ372681_1(DQ372681|pid:none) Candida albicans oligopeptide tran... 216 2e-54
FM992693_359(FM992693|pid:none) Candida dubliniensis CD36 chromo... 214 9e-54
CU928180_259(CU928180|pid:none) Kluyveromyces thermotolerans str... 210 1e-52
AE016819_218(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 209 2e-52
CR382131_37(CR382131|pid:none) Yarrowia lipolytica strain CLIB12... 206 2e-51
(P53134) RecName: Full=Putative oligopeptide transporter YGL114W... 205 3e-51
CR382126_467(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 203 2e-50
AM270169_30(AM270169|pid:none) Aspergillus niger contig An08c014... 195 4e-48
AL390189_16(AL390189|pid:none) Neurospora crassa DNA linkage gro... 194 9e-48
AP007161_429(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 177 7e-43
CU633897_323(CU633897|pid:none) Podospora anserina genomic DNA c... 129 3e-28
CP001071_1200(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 112 4e-23
CR855100_2(CR855100|pid:none) Oryza sativa genomic DNA, chromoso... 110 1e-22
AP007157_83(AP007157|pid:none) Aspergillus oryzae RIB40 genomic ... 110 1e-22
AB190916_1(AB190916|pid:none) Oryza sativa Japonica Group osysl6... 110 1e-22
(Q7XRV2) RecName: Full=Probable metal-nicotianamine transporter ... 108 5e-22
AE016853_144(AE016853|pid:none) Pseudomonas syringae pv. tomato ... 107 1e-21
CP000075_1178(CP000075|pid:none) Pseudomonas syringae pv. syring... 105 3e-21
AM181176_4166(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 105 4e-21
BT034471_1(BT034471|pid:none) Zea mays full-length cDNA clone ZM... 104 7e-21
EU964801_1(EU964801|pid:none) Zea mays clone 281630 unknown mRNA. 104 7e-21
CP000769_327(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, co... 102 3e-20
(Q6H3Z6) RecName: Full=Metal-nicotianamine transporter YSL2; Alt... 101 6e-20
(Q7X660) RecName: Full=Probable metal-nicotianamine transporter ... 101 6e-20
AB126253_1(AB126253|pid:none) Oryza sativa Japonica Group OsYSL2... 101 6e-20
AP008210_1366(AP008210|pid:none) Oryza sativa (japonica cultivar... 101 6e-20
AB190921_1(AB190921|pid:none) Oryza sativa Japonica Group osysl1... 101 6e-20
AF163841_8(AF163841|pid:none) Myxococcus xanthus 4-oxalocrotonat... 101 8e-20
CR855229_14(CR855229|pid:none) Oryza sativa genomic DNA, chromos... 99 3e-19
CP001359_4197(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 99 4e-19
FJ477297_1(FJ477297|pid:none) Avena sativa iron/phytosiderophore... 99 4e-19
CP001131_4176(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 99 5e-19
AM435210_1(AM435210|pid:none) Vitis vinifera contig VV78X008080.... 99 5e-19
AL732344_17(AL732344|pid:none) Oryza sativa genomic DNA, chromos... 98 9e-19
(Q0J932) RecName: Full=Probable metal-nicotianamine transporter ... 98 9e-19
AL606457_14(AL606457|pid:none) Oryza sativa genomic DNA, chromos... 98 9e-19
(Q6H7J6) RecName: Full=Probable metal-nicotianamine transporter ... 97 1e-18
BT067751_1(BT067751|pid:none) Zea mays full-length cDNA clone ZM... 97 1e-18
CP000949_3368(CP000949|pid:none) Pseudomonas putida W619, comple... 97 2e-18
AB190918_1(AB190918|pid:none) Oryza sativa Japonica Group osysl8... 96 3e-18
AP004121_11(AP004121|pid:none) Oryza sativa Japonica Group genom... 96 3e-18
(Q0E4J6) RecName: Full=Probable metal-nicotianamine transporter ... 96 3e-18
AB190922_1(AB190922|pid:none) Oryza sativa Japonica Group osysl1... 96 4e-18
AL663010_17(AL663010|pid:none) Oryza sativa genomic DNA, chromos... 96 4e-18
AP008210_1364(AP008210|pid:none) Oryza sativa (japonica cultivar... 96 4e-18
AM483230_1(AM483230|pid:none) Vitis vinifera contig VV78X177165.... 95 6e-18
(Q7XRV1) RecName: Full=Probable metal-nicotianamine transporter ... 95 8e-18
CP000113_2339(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 95 8e-18
AP008208_2009(AP008208|pid:none) Oryza sativa (japonica cultivar... 94 1e-17
AC149805_8(AC149805|pid:none) Medicago truncatula clone mth2-146... 94 2e-17
AX540661_1(AX540661|pid:none) Sequence 17 from Patent WO0240688.... 93 3e-17
(Q6ZGM7) RecName: Full=Probable metal-nicotianamine transporter ... 92 4e-17
AB190917_1(AB190917|pid:none) Oryza sativa Japonica Group osysl7... 92 4e-17
AM425731_1(AM425731|pid:none) Vitis vinifera contig VV78X239406.... 92 5e-17
AY087380_1(AY087380|pid:none) Arabidopsis thaliana clone 34773 m... 92 6e-17
AB010072_6(AB010072|pid:none) Arabidopsis thaliana genomic DNA, ... 92 6e-17
AY120725_1(AY120725|pid:none) Arabidopsis thaliana unknown prote... 92 6e-17
AC007932_8(AC007932|pid:none) Arabidopsis thaliana chromosome 1 ... 91 8e-17
AP008210_1463(AP008210|pid:none) Oryza sativa (japonica cultivar... 91 1e-16
(Q9SHY2) RecName: Full=Probable metal-nicotianamine transporter ... 91 1e-16
AB263747_1(AB263747|pid:none) Nicotiana tabacum NtYSL1 mRNA for ... 91 1e-16
(Q9LUN2) RecName: Full=Probable metal-nicotianamine transporter ... 91 1e-16
CP000113_3008(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 89 4e-16
CP000855_1676(CP000855|pid:none) Thermococcus onnurineus NA1, co... 88 7e-16
AY139751_1(AY139751|pid:none) Arabidopsis thaliana AT5g24380/K16... 87 2e-15
DQ268828_1(DQ268828|pid:none) Thlaspi caerulescens YSL transport... 87 2e-15
AM480423_1(AM480423|pid:none) Vitis vinifera contig VV78X233461.... 86 5e-15
DQ268827_1(DQ268827|pid:none) Thlaspi caerulescens YSL transport... 85 6e-15
AB032539_1(AB032539|pid:none) Nicotiana tabacum A17 mRNA for hyp... 85 6e-15
EU973373_1(EU973373|pid:none) Zea mays clone 397681 unknown mRNA. 85 8e-15
AC149805_4(AC149805|pid:none) Medicago truncatula clone mth2-146... 83 2e-14
CP001359_2091(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 83 2e-14
AY538258_1(AY538258|pid:none) Vitis vinifera putative YS1-like p... 83 3e-14
(Q6R3L0) RecName: Full=Metal-nicotianamine transporter YSL1; Alt... 82 5e-14
AF387015_1(AF387015|pid:none) Arabidopsis thaliana putative prot... 82 5e-14
AL109619_11(AL109619|pid:none) Arabidopsis thaliana DNA chromoso... 82 5e-14
CR855202_7(CR855202|pid:none) Oryza sativa genomic DNA, chromoso... 82 7e-14
BT063894_1(BT063894|pid:none) Zea mays full-length cDNA clone ZM... 81 1e-13
DQ268829_1(DQ268829|pid:none) Thlaspi caerulescens YSL transport... 79 3e-13
(Q6AVD0) RecName: Full=Probable metal-nicotianamine transporter ... 79 4e-13
AC104274_13(AC104274|pid:none) Oryza sativa (japonica cultivar-g... 79 4e-13
EU779805_1(EU779805|pid:none) Brassica juncea yellow stripe-like... 79 6e-13
AB190913_1(AB190913|pid:none) Oryza sativa Japonica Group osysl3... 78 7e-13
(Q2EF88) RecName: Full=Metal-nicotianamine transporter YSL3; Alt... 78 7e-13
AB015476_8(AB015476|pid:none) Arabidopsis thaliana genomic DNA, ... 78 7e-13
BA000001_370(BA000001|pid:none) Pyrococcus horikoshii OT3 DNA, c... 78 1e-12
EU779814_1(EU779814|pid:none) Brassica juncea yellow stripe-like... 78 1e-12
CP000382_2237(CP000382|pid:none) Clostridium novyi NT, complete ... 78 1e-12
CP001620_188(CP001620|pid:none) Corynebacterium kroppenstedtii D... 77 2e-12
CP000480_1278(CP000480|pid:none) Mycobacterium smegmatis str. MC... 76 3e-12
EU779813_1(EU779813|pid:none) Brassica juncea yellow stripe-like... 75 5e-12
EU823308_1(EU823308|pid:none) Brassica juncea yellow stripe-like... 75 8e-12
AE017143_1592(AE017143|pid:none) Haemophilus ducreyi strain 3500... 71 9e-11
CP000025_191(CP000025|pid:none) Campylobacter jejuni RM1221, com... 71 9e-11
FJ529188_1(FJ529188|pid:none) Brassica juncea yellow stripe-like... 71 1e-10
AE017283_544(AE017283|pid:none) Propionibacterium acnes KPA17120... 70 2e-10
CP001106_52(CP001106|pid:none) Eubacterium eligens ATCC 27750 pl... 70 2e-10
GM015893_272(GM015893|pid:none) Sequence 723 from Patent EP19234... 70 2e-10
EU779809_1(EU779809|pid:none) Brassica juncea yellow stripe-like... 70 2e-10
(Q688S6) RecName: Full=Probable metal-nicotianamine transporter ... 70 3e-10
AB190914_1(AB190914|pid:none) Oryza sativa Japonica Group osysl4... 70 3e-10
FJ529189_1(FJ529189|pid:none) Brassica juncea yellow stripe-like... 69 3e-10
AB018113_11(AB018113|pid:none) Arabidopsis thaliana genomic DNA,... 69 3e-10
A87577(A87577) oligopeptide transporter, OPT family CC2646 [impo... 69 3e-10
CP001091_1773(CP001091|pid:none) Actinobacillus pleuropneumoniae... 69 3e-10
CP000569_1689(CP000569|pid:none) Actinobacillus pleuropneumoniae... 69 4e-10
CP000814_191(CP000814|pid:none) Campylobacter jejuni subsp. jeju... 69 6e-10
CP001601_2256(CP001601|pid:none) Corynebacterium aurimucosum ATC... 68 8e-10
AM167904_1197(AM167904|pid:none) Bordetella avium 197N complete ... 67 2e-09
AE000516_2539(AE000516|pid:none) Mycobacterium tuberculosis CDC1... 67 2e-09
CP000854_3659(CP000854|pid:none) Mycobacterium marinum M, comple... 66 3e-09
AF508804_1(AF508804|pid:none) Xanthomonas arboricola pv. jugland... 66 4e-09
AP008229_3236(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M... 66 4e-09
CP001348_697(CP001348|pid:none) Clostridium cellulolyticum H10, ... 65 5e-09
AE008922_1083(AE008922|pid:none) Xanthomonas campestris pv. camp... 65 5e-09
CP000855_1794(CP000855|pid:none) Thermococcus onnurineus NA1, co... 65 6e-09
CP000941_1322(CP000941|pid:none) Xylella fastidiosa M12, complet... 65 6e-09
AE008923_1182(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 65 8e-09
CP001189_3188(CP001189|pid:none) Gluconacetobacter diazotrophicu... 64 1e-08
AM889285_3104(AM889285|pid:none) Gluconacetobacter diazotrophicu... 64 1e-08
AE015928_1086(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 64 2e-08
CP000671_30(CP000671|pid:none) Haemophilus influenzae PittEE, co... 64 2e-08
(P44016) RecName: Full=Putative oligopeptide transporter HI0561;... 64 2e-08
CP000057_607(CP000057|pid:none) Haemophilus influenzae 86-028NP,... 64 2e-08
CP000141_2207(CP000141|pid:none) Carboxydothermus hydrogenoforma... 63 3e-08
CU633749_2655(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 62 5e-08
CP000699_2957(CP000699|pid:none) Sphingomonas wittichii RW1, com... 62 7e-08
EU761240_1(EU761240|pid:none) Brassica juncea yellow stripe-like... 61 9e-08
CP000139_2676(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 61 9e-08
CP000009_172(CP000009|pid:none) Gluconobacter oxydans 621H, comp... 60 2e-07
AM743169_1181(AM743169|pid:none) Stenotrophomonas maltophilia K2... 59 4e-07
(Q9FTU1) RecName: Full=Probable metal-nicotianamine transporter ... 59 5e-07
CP000360_4198(CP000360|pid:none) Acidobacteria bacterium Ellin34... 59 5e-07
CP001068_3444(CP001068|pid:none) Ralstonia pickettii 12J chromos... 59 6e-07
CP000450_2199(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 58 8e-07
CP000282_649(CP000282|pid:none) Saccharophagus degradans 2-40, c... 58 1e-06
CP000352_3100(CP000352|pid:none) Ralstonia metallidurans CH34, c... 57 1e-06
AL646052_3296(AL646052|pid:none) Ralstonia solanacearum GMI1000 ... 57 1e-06
CP000140_1398(CP000140|pid:none) Parabacteroides distasonis ATCC... 57 2e-06
CU633750_2230(CU633750|pid:none) Cupriavidus taiwanensis str. LM... 57 2e-06
CP001001_4852(CP001001|pid:none) Methylobacterium radiotolerans ... 57 2e-06
CP001145_1192(CP001145|pid:none) Coprothermobacter proteolyticus... 56 3e-06
AM902716_1839(AM902716|pid:none) Bordetella petrii strain DSM 12... 56 4e-06
CP000675_808(CP000675|pid:none) Legionella pneumophila str. Corb... 55 5e-06
CP000744_1162(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 55 5e-06
CR628337_754(CR628337|pid:none) Legionella pneumophila str. Lens... 55 9e-06
AE017354_694(AE017354|pid:none) Legionella pneumophila subsp. pn... 54 1e-05
EU779815_1(EU779815|pid:none) Brassica juncea yellow stripe-like... 54 1e-05
CU914168_2996(CU914168|pid:none) Ralstonia solanacearum strain I... 54 1e-05
AE004091_3933(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 53 3e-05
CP000438_1028(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 53 3e-05
CP000932_26(CP000932|pid:none) Campylobacter lari RM2100, comple... 53 3e-05
CP000090_2944(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 52 4e-05
AY598824_1(AY598824|pid:none) Candida albicans oligopeptide tran... 52 6e-05
CP001001_3756(CP001001|pid:none) Methylobacterium radiotolerans ... 52 7e-05
CP000501_194(CP000501|pid:none) Pichia stipitis CBS 6054 chromos... 51 1e-04
AE002098_58(AE002098|pid:none) Neisseria meningitidis MC58, comp... 51 1e-04
EU164779_13(EU164779|pid:none) Neisseria meningitidis strain W:2... 50 2e-04
AE004969_1742(AE004969|pid:none) Neisseria gonorrhoeae FA 1090, ... 50 2e-04
CP001029_2347(CP001029|pid:none) Methylobacterium populi BJ001, ... 50 2e-04
CP000501_193(CP000501|pid:none) Pichia stipitis CBS 6054 chromos... 50 3e-04
FJ534523_1(FJ534523|pid:none) Brassica juncea strain 211000 yell... 50 3e-04
CP000769_262(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, co... 49 4e-04
CP000890_1102(CP000890|pid:none) Coxiella burnetii RSA 331, comp... 49 5e-04
AE016828_971(AE016828|pid:none) Coxiella burnetii RSA 493, compl... 49 5e-04
FJ196068_1(FJ196068|pid:none) Brassica juncea strain 211000 yell... 48 0.001
CS302208_1(CS302208|pid:none) Sequence 21 from Patent WO20060564... 48 0.001
AY598825_1(AY598825|pid:none) Candida albicans oligopeptide tran... 48 0.001
(O82485) RecName: Full=Oligopeptide transporter 7; Shor... 47 0.002
FM992689_751(FM992689|pid:none) Candida dubliniensis CD36 chromo... 46 0.003
CR382134_729(CR382134|pid:none) Debaryomyces hansenii chromosome... 46 0.003
CR382134_707(CR382134|pid:none) Debaryomyces hansenii strain CBS... 46 0.003
FM992695_215(FM992695|pid:none) Candida dubliniensis CD36 chromo... 45 0.005
FM992695_196(FM992695|pid:none) Candida dubliniensis CD36 chromo... 45 0.007
CS302290_1(CS302290|pid:none) Sequence 103 from Patent WO2006056... 45 0.009
CS302264_1(CS302264|pid:none) Sequence 77 from Patent WO20060564... 45 0.009
DQ372674_1(DQ372674|pid:none) Candida albicans oligopeptide tran... 45 0.009
AP001168_35(AP001168|pid:none) Oryza sativa Japonica Group genom... 45 0.009
DQ372671_1(DQ372671|pid:none) Candida albicans oligopeptide tran... 44 0.012
BT065959_1(BT065959|pid:none) Zea mays full-length cDNA clone ZM... 44 0.015
AY632421_3(AY632421|pid:none) Streptomyces viridochromogenes PTT... 44 0.020
AC143341_17(AC143341|pid:none) Medicago truncatula clone mth2-7a... 44 0.020
AJ877232_1(AJ877232|pid:none) Mucor circinelloides partial mRNA ... 44 0.020
L09189_8(L09189|pid:none) Neisseria meningitidis dTDP-D-glucose ... 42 0.045
CS302292_1(CS302292|pid:none) Sequence 105 from Patent WO2006056... 42 0.059
AY087053_1(AY087053|pid:none) Arabidopsis thaliana clone 3109 mR... 42 0.059
CS302218_1(CS302218|pid:none) Sequence 31 from Patent WO20060564... 42 0.077
BX842636_13(BX842636|pid:none) Neurospora crassa DNA linkage gro... 42 0.077
AP008214_776(AP008214|pid:none) Oryza sativa (japonica cultivar-... 42 0.077
AC143341_18(AC143341|pid:none) Medicago truncatula clone mth2-7a... 42 0.077
AK121257_1(AK121257|pid:none) Oryza sativa Japonica Group cDNA c... 42 0.077
FJ573212_1(FJ573212|pid:none) Zea mays cultivar Nongda 108 gluta... 41 0.10
(O23482) RecName: Full=Probable oligopeptide transporter 3; ... 41 0.10
AY387493_1(AY387493|pid:none) Zea mays putative glutathione tran... 41 0.10
CS302210_1(CS302210|pid:none) Sequence 23 from Patent WO20060564... 41 0.10
AP001168_14(AP001168|pid:none) Oryza sativa Japonica Group genom... 41 0.13
AC144564_21(AC144564|pid:none) Medicago truncatula clone mth2-17... 41 0.13
AY054590_1(AY054590|pid:none) Arabidopsis thaliana Unknown prote... 41 0.13
BT002023_1(BT002023|pid:none) Arabidopsis thaliana isp4 like pro... 41 0.13
BT054611_1(BT054611|pid:none) Zea mays full-length cDNA clone ZM... 40 0.17
AM452918_1(AM452918|pid:none) Vitis vinifera contig VV78X175151.... 40 0.17
AM451000_1(AM451000|pid:none) Vitis vinifera contig VV78X118989.... 40 0.17
BT054182_1(BT054182|pid:none) Zea mays full-length cDNA clone ZM... 40 0.17
CU633900_819(CU633900|pid:none) Podospora anserina genomic DNA c... 40 0.17
EU956636_1(EU956636|pid:none) Zea mays clone 1568594 unknown mRNA. 40 0.17
AM475777_1(AM475777|pid:none) Vitis vinifera contig VV78X183850.... 40 0.17
DQ372677_1(DQ372677|pid:none) Candida albicans oligopeptide tran... 40 0.17
AF393848_1(AF393848|pid:none) Oryza sativa glutathione transport... 40 0.17
AM920429_77(AM920429|pid:none) Penicillium chrysogenum Wisconsin... 40 0.22
EF440360_1(EF440360|pid:none) Gossypium hirsutum oligopeptide tr... 40 0.22
CP000497_597(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 40 0.29
CP000964_2149(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 40 0.29
AK221918_1(AK221918|pid:none) Arabidopsis thaliana mRNA for hypo... 39 0.38
CS302294_1(CS302294|pid:none) Sequence 107 from Patent WO2006056... 39 0.38
AC123898_4(AC123898|pid:none) Medicago truncatula clone mth2-31m... 39 0.38
AP006725_2919(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 39 0.38
CP001032_4588(CP001032|pid:none) Opitutus terrae PB90-1, complet... 39 0.38
AC144724_20(AC144724|pid:none) Medicago truncatula clone mth2-7g... 39 0.38
AM460863_2(AM460863|pid:none) Vitis vinifera contig VV78X064902.... 39 0.50
CR382125_11(CR382125|pid:none) Kluyveromyces lactis strain NRRL ... 39 0.65
CR382137_916(CR382137|pid:none) Debaryomyces hansenii strain CBS... 39 0.65
CR855235_31(CR855235|pid:none) Oryza sativa genomic DNA, chromos... 38 0.85
CS302242_1(CS302242|pid:none) Sequence 55 from Patent WO20060564... 38 0.85
CR382125_10(CR382125|pid:none) Kluyveromyces lactis strain NRRL ... 38 1.1
FM992691_119(FM992691|pid:none) Candida dubliniensis CD36 chromo... 38 1.1
AL161543_37(AL161543|pid:none) Arabidopsis thaliana DNA chromoso... 38 1.1
CU928169_60(CU928169|pid:none) Kluyveromyces thermotolerans stra... 38 1.1
AP008955_2993(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 38 1.1
CP000750_1094(CP000750|pid:none) Kineococcus radiotolerans SRS30... 38 1.1
CU633897_180(CU633897|pid:none) Podospora anserina genomic DNA c... 37 1.5
AK102404_1(AK102404|pid:none) Oryza sativa Japonica Group cDNA c... 37 1.9
(P40900) RecName: Full=Sexual differentiation process protein is... 37 1.9
AY224494_1(AY224494|pid:none) Oryza sativa (japonica cultivar-gr... 37 1.9
(Q9FG72) RecName: Full=Oligopeptide transporter 1; Shor... 37 1.9
D14061_1(D14061|pid:none) Schizosaccharomyces pombe mRNA, comple... 37 1.9
AK221836_1(AK221836|pid:none) Arabidopsis thaliana mRNA for sexu... 37 1.9
CP000612_2604(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 37 2.5
D83992_16(D83992|pid:none) Fission yeast DNA for ISP4, peptidyl-... 37 2.5
FN392322_2(FN392322|pid:none) Pichia pastoris GS115 chromosome 4... 37 2.5
AP009049_1799(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 36 3.2
AJ007579_1(AJ007579|pid:none) Ribes nigrum mRNA for putative cys... 36 3.2
(P40897) RecName: Full=Oligopeptide transporter 1; AltName: Full... 36 3.2
AF377947_14(AF377947|pid:none) Oryza sativa (japonica cultivar-g... 36 3.2
CP001087_4082(CP001087|pid:none) Desulfobacterium autotrophicum ... 36 4.2
CU928176_423(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 36 4.2
AM711867_250(AM711867|pid:none) Clavibacter michiganensis subsp.... 35 5.5
AJ512821_1(AJ512821|pid:none) Triticum aestivum stB1.1a gene for... 35 5.5
AP008208_2234(AP008208|pid:none) Oryza sativa (japonica cultivar... 35 5.5
AE017343_69(AE017343|pid:none) Cryptococcus neoformans var. neof... 35 5.5
(Q2GGH2) RecName: Full=ATP synthase gamma chain; AltName: Full=A... 35 7.2
CP000721_435(CP000721|pid:none) Clostridium beijerinckii NCIMB 8... 35 7.2
AE016815_369(AE016815|pid:none) Ashbya gossypii (= Eremothecium ... 35 7.2
CS302232_1(CS302232|pid:none) Sequence 45 from Patent WO20060564... 35 7.2
AP006627_577(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, co... 35 9.4
>AE017346_248(AE017346|pid:none) Cryptococcus neoformans var.
neoformans JEC21 chromosome 6, complete sequence.
Length = 740
Score = 231 bits (590), Expect = 4e-59
Identities = 119/249 (47%), Positives = 169/249 (67%), Gaps = 11/249 (4%)
Frame = +3
Query: 732 IKVYETVIAVVLSLLTSILAVRALGETDINPVSGIGKISQILFAVISPKNILANLVAGAI 911
I + T I ++L+ + S++ VRALGETD+NPVSGIGKISQ+ FA++ P N++AN++AG +
Sbjct: 469 IHPWATAIGLLLASILSLIGVRALGETDLNPVSGIGKISQLFFAILQPGNVVANIIAGGV 528
Query: 912 AEGGSQQAGDMIQDLKTGHLIKASPRVQFYGQLIGSFFSIIFAVAAYQLYSHAYTIPSVD 1091
AE G+QQAGD++QDLKTGHL++ASPR QFYGQ+IGS S+ A A Y+ Y+ AYTIP +
Sbjct: 529 AEAGAQQAGDLMQDLKTGHLLRASPRSQFYGQMIGSLASVFVATAGYKFYTSAYTIPGPE 588
Query: 1092 GLQAPTAAVWLNMAKLVNGGELAHNVLPFCIVLGVLVSLIPIAEAF---------NPNLE 1244
P+A +WLN+A+L+N G L +V+PF + G L + + +AF + L
Sbjct: 589 -FAVPSAGIWLNLARLLNNGHLPSHVIPFMLGFGALFACLSFVKAFRSSFPASIASSRLV 647
Query: 1245 YYLPSGIALAIGFYQTPNYSIVRAIGAFVQWYWFRKNSHSFRE--YGIIVASGFVLGEGI 1418
LPSGIA A+GF +P++SI R IG ++ Y K + + I+VASGFVLGEG+
Sbjct: 648 TLLPSGIAFAVGFLNSPSFSIARLIGGYIA-YRAAKATRTGETPLLMIVVASGFVLGEGV 706
Query: 1419 TSIFTAIMT 1445
S+ T +T
Sbjct: 707 VSVITLGLT 715
Score = 84.3 bits (207), Expect = 1e-14
Identities = 47/95 (49%), Positives = 61/95 (64%), Gaps = 5/95 (5%)
Frame = +2
Query: 353 FTFRSVLVGLIIGGMLCFSNMYYGLQSGFITMGSLQSTLLGFLFFKV--FAKHLQIRFNQ 526
FT R++L GL +G +LC +N+Y+GLQ+G+++M SLQS LLGF F+V F L
Sbjct: 40 FTLRAILAGLGVGVVLCMTNIYFGLQTGWVSMMSLQSALLGFAIFRVPTFLPRLFPSMRP 99
Query: 527 F---ENVLLQXXXXXXXXMPLAGGFVGIIPALKML 622
F ENV+LQ MPLA G VGIIPAL M+
Sbjct: 100 FTPQENVVLQTTAVATGTMPLAAGLVGIIPALSMM 134
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,908,649,576
Number of extensions: 37045316
Number of successful extensions: 98647
Number of sequences better than 10.0: 259
Number of HSP's gapped: 98330
Number of HSP's successfully gapped: 314
Length of query: 506
Length of database: 1,040,966,779
Length adjustment: 133
Effective length of query: 373
Effective length of database: 614,796,874
Effective search space: 229319234002
Effective search space used: 229319234002
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
1 |
| VF (FL, S) |
0 |
| AH (FL, L) |
3 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
1 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
1 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |