Contig-U11377-1
Contig ID Contig-U11377-1
Contig update 2002.12.18
Contig sequence
>Contig-U11377-1 (Contig-U11377-1Q) /CSM_Contig/Contig-U11377-1Q.Seq.d
CTGTTGGCCTACTGGNACACACAAAATAATAATGTCATCACCATATCCAT
CAGAAAAAAAAAATGATGCTCAAGTGTTAAAAGAACAAGTTAAAGGCACA
TTTGATCAATATATGCCAATTTCACTTCAAACAAAAGAGAAATCTAAAAG
AGTTAAAGCACAAATTACAGATTTAAAAGACGAAAATTCCAAACTTTTAA
AAGAAACTAAAAAATTTCAAAATCGTATAAATGAAGAATCAAGTGTACTT
GATGTTTTACAAGAGGAAGCACATTTATTAAAAAAAATTGTAAATGATAA
AGATGCTGAAATTAAAACATTAAATCAAACTATATATGATCAACATGAAT
CAATTAAAAAATTAAAAGAGGAAGTTGAAAAAGAACAAAATAATGTAACA
ATGCAAATTGAATTAAAAGAATTATTAAAACAATCAGAAAATAAATTATT
ATTAGAGTTAACATCAGTAAAGGATACATTGTTGATTGAATCACAAAGTC
ATTTACAAGTTAAAGGAATATTAAAAGAGACAGAGGATAAATTAGAGCAA
GAGATAAAAATAAATAAAGAAAAGCTTGAAAAGTTGGATAAAGAGATTAA
TGAACATAAAGATAGTATAAATCAATTACAAGAGAGATT----------G
TAAGGAGTTTGAATCAATGTTGGCAACCAATGATAATTTAGCTAAAGAAT
TGGAAGAATCTCAACAACAATTATCAAAATCAAATCAACTCTTAAATCAA
CATATTGCCGATGGTGCAAATAAAGTTAGTGATCATGATCATGAACAACT
CTTGAAGGAATTAAATGATTTAAAATCTAAAAACAAAGAAATCGACGATC
GTATTCAACAAGAAAGACAACAATGGCATTCAAATCGTTGGGAAATCGTC
GCAGAATTGGAGCAAGAGAAATCAAAATATAAAAAATCTCAAGATCTCCT
CCTCGATGAAAAGAGAAGAATGGGTGTCGTTGGTAAAACTGTTTCAAAAT
TATTAGAAGACAATGAAAAACGTTCTTTCGATTCAATGACTCCCGAATCT
TTCTATGCAATGCTTGAGGCTGCTAAAAAAGAATTGGACGAAGGTTTACA
ACATCGTAAACAATACTATGATGATGAAGATTTAAATGGTCAATTATTAA
TGGAGAGAGAAGCAAGAAGGTTGGCTGAATCTCAAGTTGAACATTTCGCT
GTCCTCTTGGAAAAGAGTAAAGTTGAAATTCAAAAATATAAAGAAATTAT
AAATAATGGCGGCGCTAATAATAATAATAATAATAAATCTGGTTTCTTTT
CAAATTTAATGAATAATACAAGTAATAATTCTTTTATAAAAAGAACATTT
ACGGTTCAACTTTGGTAATAAAATAATAATAATAATAATCAAAAATAAAT
AAA

Gap gap included
Contig length 1393
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 4342913
End point 4341564
Strand (PLUS/MINUS) MINUS
Number of clones 4
Number of EST 6
Link to clone list U11377
List of clone(s)

est1=VHJ604F,1,532
est2=AHH403F,124,639
est3=AHH403Z,640,1393
est4=AHO422Z,641,1395
est5=VHJ604Z,709,1353
est6=CHJ672Z,822,1394
Translated Amino Acid sequence
CWPTGTHKIIMSSPYPSEKKNDAQVLKEQVKGTFDQYMPISLQTKEKSKRVKAQITDLKD
ENSKLLKETKKFQNRINEESSVLDVLQEEAHLLKKIVNDKDAEIKTLNQTIYDQHESIKK
LKEEVEKEQNNVTMQIELKELLKQSENKLLLELTSVKDTLLIESQSHLQVKGILKETEDK
LEQEIKINKEKLEKLDKEINEHKDSINQLQER---

---KEFESMLATNDNLAKELEESQQQLSKSNQLLNQHIADGANKVSDHDHEQLLKELNDL
KSKNKEIDDRIQQERQQWHSNRWEIVAELEQEKSKYKKSQDLLLDEKRRMGVVGKTVSKL
LEDNEKRSFDSMTPESFYAMLEAAKKELDEGLQHRKQYYDDEDLNGQLLMEREARRLAES
QVEHFAVLLEKSKVEIQKYKEIINNGGANNNNNNKSGFFSNLMNNTSNNSFIKRTFTVQL
W**nnnnnnqk*i


Translated Amino Acid sequence (All Frames)
Frame A:
llaywxtqnnnvitisirkkk*cssvkrts*rhi*siyanftsnkrei*ks*stnyrfkr
rkfqtfkrn*kisksyk*rikct*cftrgstfikknck**rc*n*niksnyi*st*in*k
ikrgs*krtk*cnnan*ikriiktirk*iiirvniskgyivd*itksfts*rnikrdrg*
irardknk*rka*kvg*rd**t*r*yksitrei---

---vrslnqcwqpmii*lknwknlnnnyqnqins*inilpmvqiklvimimnns*rn*mi
*nlktkkstivfnkkdnngiqivgkssqnwskrnqniknlkisssmkreewvslvklfqn
y*ktmknvlsiq*lpnlsmqclrllkknwtkvynivnntmmmki*mvny*wrekqegwln
lklnislsswkrvklkfknikkl*imaaliiiiiinlvsfqi**iiqviill*kehlrfn
fgnkiiiiiiknk*

Frame B:
CWPTGTHKIIMSSPYPSEKKNDAQVLKEQVKGTFDQYMPISLQTKEKSKRVKAQITDLKD
ENSKLLKETKKFQNRINEESSVLDVLQEEAHLLKKIVNDKDAEIKTLNQTIYDQHESIKK
LKEEVEKEQNNVTMQIELKELLKQSENKLLLELTSVKDTLLIESQSHLQVKGILKETEDK
LEQEIKINKEKLEKLDKEINEHKDSINQLQER---

---*gv*invgnq**fs*rigristtiikikstlkstycrwck*s**s*s*ttlegik*f
ki*kqrnrrsystrkttmafkslgnrrrigareiki*kisrsppr*kekngcrw*ncfki
irrq*ktffrfndsriflcna*gc*krigrrftts*til***rfkwsiingerskkvg*i
ss*tfrcplgke*s*nski*rnyk*wrr*******iwflfkfne*yk**ffykkniygst
lvik*****skink

Frame C:
vgllxhtk**chhhihqkkkmmlkc*knklkahlinicqfhfkqkrnlkelkhklqi*kt
kipnf*kklknfkiv*mknqvylmfykrkhiy*kkl*mikmlklkh*iklyminmnqlkn
*krklkknkim*qckln*kny*nnqkinyy*s*hq*rihc*lnhkviyklkey*krqrin
*skr*k*ikkslkswikrlmnikiv*inykrd---

---KEFESMLATNDNLAKELEESQQQLSKSNQLLNQHIADGANKVSDHDHEQLLKELNDL
KSKNKEIDDRIQQERQQWHSNRWEIVAELEQEKSKYKKSQDLLLDEKRRMGVVGKTVSKL
LEDNEKRSFDSMTPESFYAMLEAAKKELDEGLQHRKQYYDDEDLNGQLLMEREARRLAES
QVEHFAVLLEKSKVEIQKYKEIINNGGANNNNNNKSGFFSNLMNNTSNNSFIKRTFTVQL
W**nnnnnnqk*i

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11377-1 (Contig-U11377-1Q)
/CSM_Contig/Contig-U11377-1Q.Seq.d
(1403 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11377-1 (Contig-U11377-1Q) /CSM_Contig/Conti... 1310 0.0
Contig-U12120-1 (Contig-U12120-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U09202-1 (Contig-U09202-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U11332-1 (Contig-U11332-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U07963-1 (Contig-U07963-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U11747-1 (Contig-U11747-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U04614-1 (Contig-U04614-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U04015-1 (Contig-U04015-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U01571-1 (Contig-U01571-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U12480-1 (Contig-U12480-1Q) /CSM_Contig/Conti... 38 0.025

>Contig-U11377-1 (Contig-U11377-1Q) /CSM_Contig/Contig-U11377-1Q.Seq.d
Length = 1403

Score = 1310 bits (661), Expect = 0.0
Identities = 691/691 (100%)
Strand = Plus / Plus


Query: 575 cttgaaaagttggataaagagattaatgaacataaagatagtataaatcaattacaagag 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 cttgaaaagttggataaagagattaatgaacataaagatagtataaatcaattacaagag 634


Query: 635 agattnnnnnnnnnngtaaggagtttgaatcaatgttggcaaccaatgataatttagcta 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 agattnnnnnnnnnngtaaggagtttgaatcaatgttggcaaccaatgataatttagcta 694


Query: 695 aagaattggaagaatctcaacaacaattatcaaaatcaaatcaactcttaaatcaacata 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 aagaattggaagaatctcaacaacaattatcaaaatcaaatcaactcttaaatcaacata 754


Query: 755 ttgccgatggtgcaaataaagttagtgatcatgatcatgaacaactcttgaaggaattaa 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ttgccgatggtgcaaataaagttagtgatcatgatcatgaacaactcttgaaggaattaa 814


Query: 815 atgatttaaaatctaaaaacaaagaaatcgacgatcgtattcaacaagaaagacaacaat 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 atgatttaaaatctaaaaacaaagaaatcgacgatcgtattcaacaagaaagacaacaat 874


Query: 875 ggcattcaaatcgttgggaaatcgtcgcagaattggagcaagagaaatcaaaatataaaa 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 ggcattcaaatcgttgggaaatcgtcgcagaattggagcaagagaaatcaaaatataaaa 934


Query: 935 aatctcaagatctcctcctcgatgaaaagagaagaatgggtgtcgttggtaaaactgttt 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 aatctcaagatctcctcctcgatgaaaagagaagaatgggtgtcgttggtaaaactgttt 994


Query: 995 caaaattattagaagacaatgaaaaacgttctttcgattcaatgactcccgaatctttct 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995 caaaattattagaagacaatgaaaaacgttctttcgattcaatgactcccgaatctttct 1054


Query: 1055 atgcaatgcttgaggctgctaaaaaagaattggacgaaggtttacaacatcgtaaacaat 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 atgcaatgcttgaggctgctaaaaaagaattggacgaaggtttacaacatcgtaaacaat 1114


Query: 1115 actatgatgatgaagatttaaatggtcaattattaatggagagagaagcaagaaggttgg 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1115 actatgatgatgaagatttaaatggtcaattattaatggagagagaagcaagaaggttgg 1174


Query: 1175 ctgaatctcaagttgaacatttcgctgtcctcttggaaaagagtaaagttgaaattcaaa 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1175 ctgaatctcaagttgaacatttcgctgtcctcttggaaaagagtaaagttgaaattcaaa 1234


Query: 1235 aatataaagaaattataaataatggcggcgc 1265
|||||||||||||||||||||||||||||||
Sbjct: 1235 aatataaagaaattataaataatggcggcgc 1265


Score = 523 bits (264), Expect = e-148
Identities = 280/288 (97%)
Strand = Plus / Plus


Query: 223 tcgtataaatgaagaatcaagtgtacttgatgttttacaagaggaagcacatttattnnn 282
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tcgtataaatgaagaatcaagtgtacttgatgttttacaagaggaagcacatttattaaa 282


Query: 283 nnnnnttgtaaatgataaagatgctgaaattaaaacattaaatcaaactatatatgatca 342
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 aaaaattgtaaatgataaagatgctgaaattaaaacattaaatcaaactatatatgatca 342


Query: 343 acatgaatcaattaaaaaattaaaagaggaagttgaaaaagaacaaaataatgtaacaat 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 acatgaatcaattaaaaaattaaaagaggaagttgaaaaagaacaaaataatgtaacaat 402


Query: 403 gcaaattgaattaaaagaattattaaaacaatcagaaaataaattattattagagttaac 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gcaaattgaattaaaagaattattaaaacaatcagaaaataaattattattagagttaac 462


Query: 463 atcagtaaaggatacattgttgattgaatcacaaagtcatttacaagt 510
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 atcagtaaaggatacattgttgattgaatcacaaagtcatttacaagt 510


Score = 250 bits (126), Expect = 4e-66
Identities = 149/159 (93%)
Strand = Plus / Plus


Query: 1 ctgttggcctactggnacacacaaaataataatgtcatcaccatatccatcagnnnnnnn 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgttggcctactggnacacacaaaataataatgtcatcaccatatccatcagaaaaaaa 60


Query: 61 nnntgatgctcaagtgttaaaagaacaagttaaaggcacatttgatcaatatatgccaat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaatgatgctcaagtgttaaaagaacaagttaaaggcacatttgatcaatatatgccaat 120


Query: 121 ttcacttcaaacaaaagagaaatctaaaagagttaaagc 159
|||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcacttcaaacaaaagagaaatctaaaagagttaaagc 159


Score = 157 bits (79), Expect = 4e-38
Identities = 79/79 (100%)
Strand = Plus / Plus


Query: 1287 atctggtttcttttcaaatttaatgaataatacaagtaataattcttttataaaaagaac 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1287 atctggtttcttttcaaatttaatgaataatacaagtaataattcttttataaaaagaac 1346


Query: 1347 atttacggttcaactttgg 1365
|||||||||||||||||||
Sbjct: 1347 atttacggttcaactttgg 1365


>Contig-U12120-1 (Contig-U12120-1Q) /CSM_Contig/Contig-U12120-1Q.Seq.d
Length = 2703

Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus


Query: 406 aattgaattaaaagaattattaaaacaatcagaaa 440
||||| ||||| | |||||||||||||||||||||
Sbjct: 2042 aattgcattaagacaattattaaaacaatcagaaa 2076


>Contig-U09202-1 (Contig-U09202-1Q) /CSM_Contig/Contig-U09202-1Q.Seq.d
Length = 657

Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 347 gaatcaattaaaaaattaaaaga 369
|||||||||||||||||||||||
Sbjct: 561 gaatcaattaaaaaattaaaaga 583


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 28,873
Number of Sequences: 6905
Number of extensions: 28873
Number of successful extensions: 4035
Number of sequences better than 10.0: 815
length of query: 1403
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1387
effective length of database: 5,564,391
effective search space: 7717810317
effective search space used: 7717810317
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.24
Homology vs DNA
Query= Contig-U11377-1 (Contig-U11377-1Q) /CSM_Contig/Contig-U11377-1Q.Seq.d
(1403 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 1140 0.0 1
(BJ356074) Dictyostelium discoideum cDNA clone:dda59l06, 3' ... 1140 0.0 1
(BJ351929) Dictyostelium discoideum cDNA clone:dda45f02, 3' ... 1140 0.0 1
(BJ442500) Dictyostelium discoideum cDNA clone:ddv50g02, 3' ... 1005 0.0 2
(BJ381495) Dictyostelium discoideum cDNA clone:ddc41o18, 3' ... 759 0.0 2
(BJ423688) Dictyostelium discoideum cDNA clone:ddv50g02, 5' ... 176 e-149 5
(BJ334082) Dictyostelium discoideum cDNA clone:dda45f02, 5' ... 133 e-117 5
(AM454750) Vitis vinifera contig VV78X055195.4, whole genome... 44 0.19 2
(AC197627) Myotis lucifugus clone CH235-18B7, WORKING DRAFT ... 50 0.23 1
(CE609856) tigr-gss-dog-17000313531582 Dog Library Canis lup... 50 0.23 1
(CK061613) 52576sicek_0541.z1 Oryza sativa cv. PA64s panicle... 50 0.23 1
(CF342615) AGENCOURT_15224322 NICHD_XGC_Swb1 Xenopus (Silura... 50 0.23 1
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 38 0.50 10
(AC021080) Homo sapiens chromosome 5 clone CTC-203K17, compl... 42 0.56 3
(AC008512) Homo sapiens chromosome 5 clone CTC-454K8, comple... 42 0.63 3
(AC008580) Homo sapiens chromosome 5 clone CTC-564J15, compl... 42 0.74 3
(AC026409) Homo sapiens chromosome 5 clone CTC-437M9, comple... 42 0.89 4
(AP008217) Oryza sativa (japonica cultivar-group) genomic DN... 48 0.91 1
(AC135459) Oryza sativa Japonica Group chromosome 11 clone O... 48 0.91 1
(EA681358) Sequence 60237 from patent US 7365185. 48 0.91 1
(DE557003) Bombyx mori genomic DNA, Fosmid clone:GBMFno195_k... 48 0.91 1
(AU265932) Dictyostelium discoideum vegetative cDNA clone:VS... 32 1.5 4
(AC109523) Rattus norvegicus clone CH230-7F2, *** SEQUENCING... 34 1.8 2
(AC137271) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 34 1.8 2
(AC095922) Rattus norvegicus clone CH230-11B13, *** SEQUENCI... 34 1.8 2
(EK309577) 1095462392354 Global-Ocean-Sampling_GS-31-01-01-1... 36 2.4 2
(AC084000) Homo sapiens clone RP11-194F22, WORKING DRAFT SEQ... 40 2.7 2
(AC004879) Homo sapiens PAC clone RP4-755G17 from 7, complet... 46 3.6 1
(AC010800) Homo sapiens clone 1_E_17, LOW-PASS SEQUENCE SAMP... 46 3.6 1
(FH513372) CHO_OF4708xa03f1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 3.6 1
(BJ415533) Dictyostelium discoideum cDNA clone:ddv22k19, 5' ... 46 3.6 1
(BE990516) UI-M-BZ1-bfv-g-19-0-UI.s1 NIH_BMAP_MHI2_S1 Mus mu... 34 4.7 3
(AG417683) Mus musculus molossinus DNA, clone:MSMg01-280K06.... 40 5.0 2
(AC187344) Trichinella spiralis BAC clone TS195-42H12 from c... 34 6.8 2

>(AC116957) Dictyostelium discoideum chromosome 2 map 1685067-2090751
strain AX4, complete sequence.
Length = 405682

Score = 1140 bits (575), Expect = 0.0
Identities = 575/575 (100%)
Strand = Plus / Plus


Query: 651 taaggagtttgaatcaatgttggcaaccaatgataatttagctaaagaattggaagaatc 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298249 taaggagtttgaatcaatgttggcaaccaatgataatttagctaaagaattggaagaatc 298308


Query: 711 tcaacaacaattatcaaaatcaaatcaactcttaaatcaacatattgccgatggtgcaaa 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298309 tcaacaacaattatcaaaatcaaatcaactcttaaatcaacatattgccgatggtgcaaa 298368


Query: 771 taaagttagtgatcatgatcatgaacaactcttgaaggaattaaatgatttaaaatctaa 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298369 taaagttagtgatcatgatcatgaacaactcttgaaggaattaaatgatttaaaatctaa 298428


Query: 831 aaacaaagaaatcgacgatcgtattcaacaagaaagacaacaatggcattcaaatcgttg 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298429 aaacaaagaaatcgacgatcgtattcaacaagaaagacaacaatggcattcaaatcgttg 298488


Query: 891 ggaaatcgtcgcagaattggagcaagagaaatcaaaatataaaaaatctcaagatctcct 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298489 ggaaatcgtcgcagaattggagcaagagaaatcaaaatataaaaaatctcaagatctcct 298548


Query: 951 cctcgatgaaaagagaagaatgggtgtcgttggtaaaactgtttcaaaattattagaaga 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298549 cctcgatgaaaagagaagaatgggtgtcgttggtaaaactgtttcaaaattattagaaga 298608


Query: 1011 caatgaaaaacgttctttcgattcaatgactcccgaatctttctatgcaatgcttgaggc 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298609 caatgaaaaacgttctttcgattcaatgactcccgaatctttctatgcaatgcttgaggc 298668


Query: 1071 tgctaaaaaagaattggacgaaggtttacaacatcgtaaacaatactatgatgatgaaga 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298669 tgctaaaaaagaattggacgaaggtttacaacatcgtaaacaatactatgatgatgaaga 298728


Query: 1131 tttaaatggtcaattattaatggagagagaagcaagaaggttggctgaatctcaagttga 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298729 tttaaatggtcaattattaatggagagagaagcaagaaggttggctgaatctcaagttga 298788


Query: 1191 acatttcgctgtcctcttggaaaagagtaaagttg 1225
|||||||||||||||||||||||||||||||||||
Sbjct: 298789 acatttcgctgtcctcttggaaaagagtaaagttg 298823

Score = 176 bits (89), Expect(10) = e-126
Identities = 89/89 (100%)
Strand = Plus / Plus


Query: 64 tgatgctcaagtgttaaaagaacaagttaaaggcacatttgatcaatatatgccaatttc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296109 tgatgctcaagtgttaaaagaacaagttaaaggcacatttgatcaatatatgccaatttc 296168


Query: 124 acttcaaacaaaagagaaatctaaaagag 152
|||||||||||||||||||||||||||||
Sbjct: 296169 acttcaaacaaaagagaaatctaaaagag 296197

Score = 119 bits (60), Expect(10) = e-126
Identities = 60/60 (100%)
Strand = Plus / Plus


Query: 451 attagagttaacatcagtaaaggatacattgttgattgaatcacaaagtcatttacaagt 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296671 attagagttaacatcagtaaaggatacattgttgattgaatcacaaagtcatttacaagt 296730

Score = 111 bits (56), Expect(10) = e-126
Identities = 56/56 (100%)
Strand = Plus / Plus


Query: 584 ttggataaagagattaatgaacataaagatagtataaatcaattacaagagagatt 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296804 ttggataaagagattaatgaacataaagatagtataaatcaattacaagagagatt 296859

Score = 101 bits (51), Expect(10) = e-126
Identities = 63/67 (94%)
Strand = Plus / Plus


Query: 288 ttgtaaatgataaagatgctgaaattaaaacattaaatcaaactatatatgatcaacatg 347
|||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 296417 ttgtaaataataaaaatcctgaaattaaaacattaaatcaaactatatatgatcaacata 296476


Query: 348 aatcaat 354
|||||||
Sbjct: 296477 aatcaat 296483

Score = 73.8 bits (37), Expect(10) = e-126
Identities = 37/37 (100%)
Strand = Plus / Plus


Query: 17 acacacaaaataataatgtcatcaccatatccatcag 53
|||||||||||||||||||||||||||||||||||||
Sbjct: 296062 acacacaaaataataatgtcatcaccatatccatcag 296098

Score = 56.0 bits (28), Expect(10) = e-126
Identities = 43/48 (89%)
Strand = Plus / Plus


Query: 232 tgaagaatcaagtgtacttgatgttttacaagaggaagcacatttatt 279
||||||||||||| ||||| || |||||||| ||||||| ||||||||
Sbjct: 296361 tgaagaatcaagtttactttattttttacaaaaggaagcccatttatt 296408

Score = 28.2 bits (14), Expect(10) = e-126
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 913 caagagaaatcaaa 926
||||||||||||||
Sbjct: 346717 caagagaaatcaaa 346730

Score = 28.2 bits (14), Expect(10) = e-126
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 1121 atgatgaagattta 1134
||||||||||||||
Sbjct: 369497 atgatgaagattta 369510

Score = 26.3 bits (13), Expect(10) = e-126
Identities = 13/13 (100%)
Strand = Plus / Plus


Query: 813 aaatgatttaaaa 825
|||||||||||||
Sbjct: 322790 aaatgatttaaaa 322802

Score = 26.3 bits (13), Expect(10) = e-126
Identities = 13/13 (100%)
Strand = Plus / Plus


Query: 924 aaaatataaaaaa 936
|||||||||||||
Sbjct: 348401 aaaatataaaaaa 348413

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,247,764,353
Number of extensions: 77072334
Number of successful extensions: 6668131
Number of sequences better than 10.0: 34
Length of query: 1403
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1379
Effective length of database: 97,308,875,965
Effective search space: 134188939955735
Effective search space used: 134188939955735
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.29
Homology vs Protein
Query= Contig-U11377-1 (Contig-U11377-1Q) /CSM_Contig/Contig-U11377-1Q.Seq.d
(1403 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC116957_105(AC116957|pid:none) Dictyostelium discoideum chromos... 395 e-115
(Q8IIG7) RecName: Full=Uncharacterized protein PF11_0207; &AE01... 59 4e-07
CP000227_542(CP000227|pid:none) Bacillus cereus Q1, complete gen... 57 2e-06
AP006628_690(AP006628|pid:none) Onion yellows phytoplasma OY-M D... 55 5e-06
CP000061_278(CP000061|pid:none) Aster yellows witches'-broom phy... 55 6e-06
CP000123_803(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 55 8e-06
CP001287_1060(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 55 8e-06
BC151335_1(BC151335|pid:none) Bos taurus kinectin 1 (kinesin rec... 54 1e-05
CP000061_184(CP000061|pid:none) Aster yellows witches'-broom phy... 54 1e-05
AJ237670_1(AJ237670|pid:none) Rattus norvegicus mRNA for CLIP-17... 54 1e-05
S06117(S06117)myosin heavy chain, nonmuscle (clone lambda-FMHC) ... 54 2e-05
BC098465_1(BC098465|pid:none) Mus musculus myosin, heavy polypep... 53 2e-05
AL603662_3(AL603662|pid:none) Mouse DNA sequence from clone RP23... 53 2e-05
AK147567_1(AK147567|pid:none) Mus musculus cDNA, RIKEN full-leng... 53 2e-05
(Q9JLT0) RecName: Full=Myosin-10; AltName: Full=Myosin heavy cha... 53 2e-05
(Q61879) RecName: Full=Myosin-10; AltName: Full=Myosin heavy cha... 53 2e-05
AC141923_17(AC141923|pid:none) Medicago truncatula clone mth2-7f... 53 3e-05
BC118919_1(BC118919|pid:none) Homo sapiens cingulin-like 1, mRNA... 53 3e-05
AB051536_1(AB051536|pid:none) Homo sapiens mRNA for KIAA1749 pro... 53 3e-05
AE014187_665(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 53 3e-05
AE009439_771(AE009439|pid:none) Methanopyrus kandleri AV19, comp... 53 3e-05
BC093827_1(BC093827|pid:none) Homo sapiens cingulin-like 1, mRNA... 53 3e-05
AY274808_1(AY274808|pid:none) Homo sapiens KIAA1749 protein mRNA... 53 3e-05
(Q0VF96) RecName: Full=Cingulin-like protein 1; AltName: Full=Pa... 53 3e-05
(P35580) RecName: Full=Myosin-10; AltName: Full=Myosin heavy cha... 53 3e-05
A59252(A59252;B61231;G02055) myosin heavy chain, nonmuscle, form... 53 3e-05
CP000764_748(CP000764|pid:none) Bacillus cereus subsp. cytotoxis... 52 4e-05
BC166177_1(BC166177|pid:none) Xenopus tropicalis hypothetical pr... 52 4e-05
AM483892_1(AM483892|pid:none) Vitis vinifera contig VV78X197160.... 52 5e-05
A47297(A47297;A55441) myosin heavy chain form B, nonmuscle - Afr... 52 7e-05
M93676_3(M93676|pid:none) Chicken nonmuscle myosin heavy chain (... 51 9e-05
M93676_2(M93676|pid:none) Chicken nonmuscle myosin heavy chain (... 51 9e-05
B43402(B43402;A43402) myosin heavy chain-B, neuronal - chicken ... 51 9e-05
M93676_4(M93676|pid:none) Chicken nonmuscle myosin heavy chain (... 51 9e-05
CP000721_938(CP000721|pid:none) Clostridium beijerinckii NCIMB 8... 51 1e-04
AM270320_14(AM270320|pid:none) Aspergillus niger contig An14c013... 51 1e-04
(Q27991) RecName: Full=Myosin-10; AltName: Full=Myosin heavy cha... 51 1e-04
(P17065) RecName: Full=Rab guanine nucleotide exchange factor SE... 51 1e-04
AB289560_1(AB289560|pid:none) Mizuhopecten yessoensis mRNA for n... 50 1e-04
AK302797_1(AK302797|pid:none) Homo sapiens cDNA FLJ61494 complet... 50 1e-04
AY536375_1(AY536375|pid:none) Homo sapiens rhabdomyosarcoma anti... 50 1e-04
CS673472_1(CS673472|pid:none) Sequence 47 from Patent WO20070601... 50 1e-04
D13629_1(D13629|pid:none) Homo sapiens KIAA0004 mRNA, partial cds. 50 1e-04
S32763(S32763;I37947) kinectin 1 - human &Z22551_1(Z22551|pid:n... 50 1e-04
I53799(I53799) CG1 protein - human &L25616_1(L25616|pid:none) 50 1e-04
BC167944_1(BC167944|pid:none) Xenopus tropicalis cDNA clone IMAG... 50 2e-04
BC158061_1(BC158061|pid:none) Mus musculus cingulin-like 1, mRNA... 50 2e-04
BC139006_1(BC139006|pid:none) Mus musculus cingulin-like 1, mRNA... 50 2e-04
AM910994_385(AM910994|pid:none) Plasmodium knowlesi strain H chr... 50 2e-04
AE017143_348(AE017143|pid:none) Haemophilus ducreyi strain 35000... 50 2e-04
CP001147_1005(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 50 2e-04
AY033333_1(AY033333|pid:none) Streptococcus pyogenes emm type pr... 50 2e-04
CP000102_112(CP000102|pid:none) Methanosphaera stadtmanae DSM 30... 50 3e-04
CR940353_714(CR940353|pid:none) Theileria annulata strain Ankara... 50 3e-04
CT005244_1(CT005244|pid:none) Leishmania major strain Friedlin, ... 50 3e-04
AC150566_3(AC150566|pid:none) Medicago truncatula clone mth2-21o... 49 3e-04
AE017263_233(AE017263|pid:none) Mesoplasma florum L1 complete ge... 49 3e-04
AM910994_496(AM910994|pid:none) Plasmodium knowlesi strain H chr... 49 4e-04
AC006193_30(AC006193|pid:none) Arabidopsis thaliana chromosome I... 49 6e-04
(Q12234) RecName: Full=GRIP domain-containing protein RUD3; AltN... 49 6e-04
AF400249_1(AF400249|pid:none) Giardia intestinalis axoneme-assoc... 49 6e-04
CP000123_804(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 48 7e-04
CP000123_802(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 48 7e-04
CP001056_1175(CP001056|pid:none) Clostridium botulinum B str. Ek... 48 7e-04
(Q6NRG6) RecName: Full=Spindle assembly abnormal protein 6 homol... 48 7e-04
FM992691_467(FM992691|pid:none) Candida dubliniensis CD36 chromo... 48 7e-04
AM422018_797(AM422018|pid:none) Candidatus Phytoplasma australie... 48 7e-04
(Q8C9S4) RecName: Full=Uncharacterized protein C10orf118 homolog... 48 7e-04
(O94477) RecName: Full=Myosin-52; AltName: Full=Myosin type V-2;... 48 0.001
U69264_1(U69264|pid:none) Saccharomyces cerevisiae CTR9 gene, co... 48 0.001
CR942518_1(CR942518|pid:none) Xenopus tropicalis finished cDNA, ... 48 0.001
U31217_1(U31217|pid:none) Saccharomyces cerevisiae Cdp1p (CDP1) ... 48 0.001
AM502223_1(AM502223|pid:none) Leishmania infantum chromosome 5. 48 0.001
AK009006_1(AK009006|pid:none) Mus musculus adult male tongue cDN... 47 0.001
AL591462_1(AL591462|pid:none) Zebrafish DNA sequence from clone ... 47 0.001
GN034489_1(GN034489|pid:none) Sequence 131 from Patent EP2023143... 47 0.001
T30330(T30330) gelsolin-related protein GRP125 - slime mold (Dic... 47 0.001
AB050642_1(AB050642|pid:none) Homo sapiens hHS-M21B mRNA for hea... 47 0.001
AL844509_254(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 47 0.001
BC114213_1(BC114213|pid:none) Homo sapiens CAP-GLY domain contai... 47 0.001
CP001047_455(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 47 0.001
CR940352_754(CR940352|pid:none) Theileria annulata strain Ankara... 47 0.001
AM422018_415(AM422018|pid:none) Candidatus Phytoplasma australie... 47 0.001
(Q5SNZ0) RecName: Full=Girdin; AltName: Full=Girders of actin fi... 47 0.002
AM999887_162(AM999887|pid:none) Wolbachia endosymbiont of Culex ... 47 0.002
AL844504_216(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 47 0.002
AB463085_1(AB463085|pid:none) Synthetic construct DNA, clone: pF... 47 0.002
AB087827_1(AB087827|pid:none) Mus musculus mRNA for hypothetical... 47 0.002
AF194970_1(AF194970|pid:none) Mus musculus LEK1 mRNA, partial cds. 47 0.002
AB023226_1(AB023226|pid:none) Homo sapiens mRNA for KIAA1009 pro... 47 0.002
AK023613_1(AK023613|pid:none) Homo sapiens cDNA FLJ13551 fis, cl... 47 0.002
(Q5TB80) RecName: Full=Protein QN1 homolog; &AL138742_1(AL13874... 47 0.002
BC126305_1(BC126305|pid:none) Homo sapiens CAP-GLY domain contai... 47 0.002
AC116920_30(AC116920|pid:none) Dictyostelium discoideum chromoso... 47 0.002
BA000023_2271(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 47 0.002
CP000764_3458(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 46 0.003
AE000657_451(AE000657|pid:none) Aquifex aeolicus VF5, complete g... 46 0.003
AE014186_199(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 46 0.003
M69183_1(M69183|pid:none) Plasmodium falciparum (MESA) mRNA exon... 46 0.003
A45605(A45605;A54517)mature-parasite-infected erythrocyte surfac... 46 0.003
AY139417_1(AY139417|pid:none) Streptococcus pyogenes isolate NS5... 46 0.003
CP001047_350(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 46 0.003
(Q8I1U7) RecName: Full=Structural maintenance of chromosomes pro... 46 0.003
CP001078_1122(CP001078|pid:none) Clostridium botulinum E3 str. A... 46 0.003
CS673466_1(CS673466|pid:none) Sequence 41 from Patent WO20070601... 46 0.003
AP008971_958(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 46 0.004
CR380950_213(CR380950|pid:none) Candida glabrata strain CBS138 c... 46 0.004
AE016877_462(AE016877|pid:none) Bacillus cereus ATCC 14579, comp... 46 0.004
(Q54G05) RecName: Full=Putative leucine-rich repeat-containing p... 46 0.004
AB069907_1(AB069907|pid:none) Rattus norvegicus mRNA for FIP-2 l... 46 0.004
FJ502037_1(FJ502037|pid:none) Aristichthys nobilis clone A99 unk... 46 0.004
CR753897_6(CR753897|pid:none) Zebrafish DNA sequence from clone ... 46 0.004
A64505(A64505)P115 homolog - Methanococcus jannaschii 46 0.004
(O76329) RecName: Full=Interaptin; AltName: Full=Alpha-actinin B... 45 0.005
AF025467_5(AF025467|pid:none) Caenorhabditis elegans cosmid R148... 45 0.005
CR940347_490(CR940347|pid:none) Theileria annulata strain Ankara... 45 0.005
(P93203) RecName: Full=MAR-binding filament-like protein 1; &T0... 45 0.005
AY042084_3(AY042084|pid:none) Plasmodium falciparum erythrocyte ... 45 0.005
CP000679_1519(CP000679|pid:none) Caldicellulosiruptor saccharoly... 45 0.005
(P38853) RecName: Full=Kelch repeat-containing protein 1; &S467... 45 0.005
AE017340_985(AE017340|pid:none) Idiomarina loihiensis L2TR, comp... 45 0.005
BX572633_2(BX572633|pid:none) Zebrafish DNA sequence from clone ... 45 0.005
CP000867_1319(CP000867|pid:none) Methanococcus maripaludis C6, c... 45 0.005
T32404(T32404)hypothetical protein R148.3 - Caenorhabditis elegans 45 0.005
AY840995_8(AY840995|pid:none) Borrelia hermsii plasmid lp28, par... 45 0.005
(P08799) RecName: Full=Myosin-2 heavy chain; AltName: Full=Myosi... 45 0.006
BC144320_1(BC144320|pid:none) Homo sapiens coiled-coil domain co... 45 0.006
AM946635_1(AM946635|pid:none) Helicobacter pylori partial ORF2 D... 45 0.006
AK027863_1(AK027863|pid:none) Homo sapiens cDNA FLJ14957 fis, cl... 45 0.006
AB201172_1(AB201172|pid:none) Homo sapiens GRDN mRNA for girdin,... 45 0.006
(Q99MI1) RecName: Full=ELKS/RAB6-interacting/CAST family member ... 45 0.006
AF007557_1(AF007557|pid:none) Streptococcus pyogenes Mrp22 gene,... 45 0.006
AY088252_1(AY088252|pid:none) Arabidopsis thaliana clone 4829 mR... 45 0.006
CP000968_1291(CP000968|pid:none) Candidatus Korarchaeum cryptofi... 45 0.006
BC132736_1(BC132736|pid:none) Homo sapiens coiled-coil domain co... 45 0.006
AJ417905_1(AJ417905|pid:none) Molgula oculata mRNA for intermedi... 45 0.006
BC172617_1(BC172617|pid:none) Synthetic construct Mus musculus c... 45 0.006
AE017352_287(AE017352|pid:none) Cryptococcus neoformans var. neo... 45 0.006
A26655(A26655;A24728;S00250) myosin heavy chain [similarity] - s... 45 0.006
BC112337_1(BC112337|pid:none) Homo sapiens kinectin 1 (kinesin r... 45 0.006
CP001186_465(CP001186|pid:none) Bacillus cereus G9842, complete ... 45 0.006
(Q3V6T2) RecName: Full=Girdin; AltName: Full=Girders of actin fi... 45 0.006
BC045503_1(BC045503|pid:none) Danio rerio synaptonemal complex p... 45 0.008
(Q6PH08) RecName: Full=ERC protein 2; AltName: Full=CAZ-associat... 45 0.008
BC026142_1(BC026142|pid:none) Mus musculus myosin, heavy polypep... 45 0.008
D85924_1(D85924|pid:none) Mus musculus mRNA for myosin, complete... 45 0.008
(Q58718) RecName: Full=DNA double-strand break repair rad50 ATPa... 45 0.008
AY356531_1(AY356531|pid:none) Mus musculus CAST1/ERC2 splicing v... 45 0.008
CP001102_1038(CP001102|pid:none) Candidatus Amoebophilus asiatic... 45 0.008
BC056760_1(BC056760|pid:none) Mus musculus ELKS/RAB6-interacting... 45 0.008
(O08638) RecName: Full=Myosin-11; AltName: Full=Myosin heavy cha... 45 0.008
BA000028_2491(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 45 0.008
AM412317_3133(AM412317|pid:none) Clostridium botulinum A str. AT... 45 0.008
AF056936_1(AF056936|pid:none) Plasmodium falciparum mature paras... 45 0.008
CP000673_1353(CP000673|pid:none) Clostridium kluyveri DSM 555, c... 45 0.008
(Q8K3M6) RecName: Full=ERC protein 2; AltName: Full=CAZ-associat... 45 0.008
AY356533_1(AY356533|pid:none) Mus musculus CAST1/ERC2 splicing v... 45 0.008
AB002376_1(AB002376|pid:none) Human mRNA for KIAA0378 gene, part... 45 0.008
BC159338_1(BC159338|pid:none) Xenopus tropicalis hypothetical pr... 45 0.008
DQ120669_1(DQ120669|pid:none) Homo sapiens rcCTAGE5 gene, partia... 45 0.008
AB111886_1(AB111886|pid:none) Homo sapiens mRNA for KIAA2034 pro... 44 0.011
(Q9D0F1) RecName: Full=Kinetochore protein NDC80 homolog; AltNam... 44 0.011
AF326730_1(AF326730|pid:none) Mus musculus HEC mRNA, complete cds. 44 0.011
AE013599_4246(AE013599|pid:none) Drosophila melanogaster chromos... 44 0.011
AF060227_1(AF060227|pid:none) Streptococcus pyogenes strain ST45... 44 0.011
BC163554_1(BC163554|pid:none) Danio rerio CDC42 binding protein ... 44 0.011
AB110204_1(AB110204|pid:none) Oryza sativa Japonica Group mRNA f... 44 0.011
AE013599_4247(AE013599|pid:none) Drosophila melanogaster chromos... 44 0.011
(P25386) RecName: Full=Intracellular protein transport protein U... 44 0.011
CR382124_801(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 44 0.011
EU930276_1(EU930276|pid:none) Simulium vittatum clone SV-38 hypo... 44 0.011
AE013599_4245(AE013599|pid:none) Drosophila melanogaster chromos... 44 0.011
AP006628_725(AP006628|pid:none) Onion yellows phytoplasma OY-M D... 44 0.011
X54378_1(X54378|pid:none) S.cerevisiae gene for Uso1 protein, in... 44 0.011
L03188_1(L03188|pid:none) Saccharomyces cerevisiae integrin anal... 44 0.011
(Q8CDI7) RecName: Full=Coiled-coil domain-containing protein 150... 44 0.011
AE013599_4244(AE013599|pid:none) Drosophila melanogaster chromos... 44 0.011
AL844505_260(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 44 0.011
CP000726_2694(CP000726|pid:none) Clostridium botulinum A str. AT... 44 0.011
CR548612_282(CR548612|pid:none) Paramecium tetraurelia macronucl... 44 0.014
AB210602_1(AB210602|pid:none) Ciona intestinalis mRNA for transc... 44 0.014
AK289426_1(AK289426|pid:none) Homo sapiens cDNA FLJ77880 complet... 44 0.014
(Q9LW85) RecName: Full=MAR-binding filament-like protein 1; &BT... 44 0.014
AB012247_4(AB012247|pid:none) Arabidopsis thaliana genomic DNA, ... 44 0.014
CU928175_234(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 44 0.014
CP000806_361(CP000806|pid:none) Cyanothece sp. ATCC 51142 circul... 44 0.014
U35816_4(U35816|pid:none) Drosophila melanogaster nonmuscle myos... 44 0.014
(P58301) RecName: Full=DNA double-strand break repair rad50 ATPa... 44 0.014
AM270380_7(AM270380|pid:none) Aspergillus niger contig An16c0280... 44 0.014
DQ321780_1(DQ321780|pid:none) Trichomonas vaginalis strain NIH-C... 44 0.014
AL031745_27(AL031745|pid:none) Plasmodium falciparum DNA from MA... 44 0.014
AY445042_1(AY445042|pid:none) Streptococcus pyogenes SpyM6 mefA ... 44 0.014
(Q7Z3E2) RecName: Full=Uncharacterized protein C10orf118; AltNam... 44 0.014
S61477(S61477;S65349)myosin II heavy chain, non-muscle - fruit f... 44 0.014
AB280016_1(AB280016|pid:none) Molgula tectiformis Mt-MHC1-b mRNA... 44 0.014
AP008971_846(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 44 0.014
U35816_3(U35816|pid:none) Drosophila melanogaster nonmuscle myos... 44 0.014
U35816_2(U35816|pid:none) Drosophila melanogaster nonmuscle myos... 44 0.014
AK046231_1(AK046231|pid:none) Mus musculus adult male corpora qu... 44 0.018
BA000016_202(BA000016|pid:none) Clostridium perfringens str. 13 ... 44 0.018
(Q3UKC1) RecName: Full=Tax1-binding protein 1 homolog; 44 0.018
BC014798_1(BC014798|pid:none) Mus musculus Tax1 (human T-cell le... 44 0.018
T18372(T18372) repeat organellar protein - Plasmodium chabaudi ... 44 0.018
BX530024_2(BX530024|pid:none) Zebrafish DNA sequence from clone ... 44 0.018
AB222074_1(AB222074|pid:none) Rattus norvegicus FIP-2B variant m... 44 0.018
BC090422_1(BC090422|pid:none) Danio rerio si:rp71-39b20.7, mRNA ... 44 0.018
AL844504_8(AL844504|pid:none) Plasmodium falciparum 3D7 chromoso... 44 0.018
BC021363_1(BC021363|pid:none) Mus musculus early endosome antige... 44 0.018
AK146076_1(AK146076|pid:none) Mus musculus 15 days pregnant adul... 44 0.018
AJ543649_1(AJ543649|pid:none) Pyrococcus furiosus smc gene. 44 0.018
AF092091_1(AF092091|pid:none) Rattus norvegicus cp431 mRNA, part... 44 0.018
AM910996_572(AM910996|pid:none) Plasmodium knowlesi strain H chr... 44 0.018
AB076892_1(AB076892|pid:none) Ciona intestinalis Ci-Noto9 mRNA f... 44 0.018
AX079977_1(AX079977|pid:none) Sequence 11 from Patent WO0105825. 44 0.018
AB050777_1(AB050777|pid:none) Rattus norvegicus mRNA for injury-... 44 0.018
T30010(T30010) hypothetical protein F58G4.1 - Caenorhabditis ele... 44 0.018
AB053468_1(AB053468|pid:none) Homo sapiens mRNA for ELKS beta, c... 43 0.024
AB029004_1(AB029004|pid:none) Homo sapiens mRNA for KIAA1081 pro... 43 0.024
BC047438_1(BC047438|pid:none) Homo sapiens homer homolog 1 (Dros... 43 0.024
CP000099_369(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 43 0.024
CP000498_511(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 43 0.024
CP001129_1836(CP001129|pid:none) Streptococcus equi subsp. zooep... 43 0.024
AB181503_1(AB181503|pid:none) Aspergillus oryzae usoA gene for A... 43 0.024
AY394521_1(AY394521|pid:none) Streptococcus pyogenes strain NS18... 43 0.024
AY394556_1(AY394556|pid:none) Streptococcus pyogenes strain NS47... 43 0.024
BC127399_1(BC127399|pid:none) Danio rerio wu:fc51g12, mRNA (cDNA... 43 0.024
AY043265_60(AY043265|pid:none) Epiphyas postvittana nucleopolyhe... 43 0.024
AM910990_191(AM910990|pid:none) Plasmodium knowlesi strain H chr... 43 0.024
T26467(T26467)hypothetical protein Y11D7A.14 - Caenorhabditis el... 43 0.024
AY579200_1(AY579200|pid:none) Tetrahymena thermophila condensin ... 43 0.024
(Q2KJ56) RecName: Full=Homer protein homolog 1; &BC105509_1(BC1... 43 0.024
FJ531817_1(FJ531817|pid:none) Streptococcus pyogenes isolate B12... 43 0.024
CP000885_3166(CP000885|pid:none) Clostridium phytofermentans ISD... 43 0.024
AL032632_14(AL032632|pid:none) Caenorhabditis elegans YAC Y11D7A... 43 0.024
CP000743_970(CP000743|pid:none) Methanococcus aeolicus Nankai-3,... 43 0.024
AJ131892_1(AJ131892|pid:none) Gallus gallus mRNA for Hyperion pr... 43 0.024
DQ119137_1(DQ119137|pid:none) Aplysia californica nonmuscle myos... 43 0.024
FM204884_1293(FM204884|pid:none) Streptococcus equi subsp. zooep... 43 0.024
AM910994_576(AM910994|pid:none) Plasmodium knowlesi strain H chr... 43 0.024
A09523_1(A09523|pid:none) S.aureus Arp 4 gene. 43 0.024
FM992695_278(FM992695|pid:none) Candida dubliniensis CD36 chromo... 43 0.024
AM909652_13(AM909652|pid:none) Streptococcus equi subsp. equi in... 43 0.024
(Q99550) RecName: Full=M-phase phosphoprotein 9; &BC130440_1(BC... 43 0.031
AK091181_1(AK091181|pid:none) Homo sapiens cDNA FLJ33862 fis, cl... 43 0.031
CP001176_357(CP001176|pid:none) Bacillus cereus B4264, complete ... 43 0.031
BC088192_1(BC088192|pid:none) Rattus norvegicus angiopoietin-lik... 43 0.031
FM204883_2083(FM204883|pid:none) Streptococcus equi subsp. equi ... 43 0.031
BX284666_3(BX284666|pid:none) Zebrafish DNA sequence from clone ... 43 0.031
U29381_13(U29381|pid:none) Caenorhabditis elegans cosmid F35D11,... 43 0.031
Z92832_7(Z92832|pid:none) Caenorhabditis elegans Cosmid F31D4, c... 43 0.031
(Q6NRC9) RecName: Full=Leucine-rich repeat and coiled-coil domai... 43 0.031
T16270(T16270)hypothetical protein F35D11.11 - Caenorhabditis el... 43 0.031
CP000382_2175(CP000382|pid:none) Clostridium novyi NT, complete ... 43 0.031
AL122120_1(AL122120|pid:none) Homo sapiens mRNA; cDNA DKFZp434A1... 43 0.031
T19414(T19414) hypothetical protein C23H4.6 - Caenorhabditis ele... 43 0.031
AB112444_1(AB112444|pid:none) Ciona intestinalis Ci-Ends10 mRNA ... 43 0.031
Z78416_9(Z78416|pid:none) Caenorhabditis elegans Cosmid C23H4, c... 43 0.031
AE014188_70(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 43 0.031
BC078168_1(BC078168|pid:none) Homo sapiens coiled-coil domain co... 43 0.031
AP006628_47(AP006628|pid:none) Onion yellows phytoplasma OY-M DN... 43 0.031
U29381_12(U29381|pid:none) Caenorhabditis elegans cosmid F35D11,... 43 0.031
BX538351_91(BX538351|pid:none) Cryptosporidium parvum chromosome... 43 0.031
Z92832_6(Z92832|pid:none) Caenorhabditis elegans Cosmid F31D4, c... 43 0.031
CP001098_399(CP001098|pid:none) Halothermothrix orenii H 168, co... 43 0.031
FJ218602_1(FJ218602|pid:none) Drosophila melanogaster strain NC7... 42 0.041
AF337555_1(AF337555|pid:none) Candida albicans lysine/glutamic a... 42 0.041
BT026327_1(BT026327|pid:none) Bos taurus centrosomal protein 135... 42 0.041
FJ218575_1(FJ218575|pid:none) Drosophila simulans strain w501 cr... 42 0.041
CP000743_11(CP000743|pid:none) Methanococcus aeolicus Nankai-3, ... 42 0.041
CP000521_1321(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 42 0.041
EF568108_62(EF568108|pid:none) Glossina pallidipes salivary glan... 42 0.041
FJ218600_1(FJ218600|pid:none) Drosophila melanogaster strain NC7... 42 0.041
FM992690_684(FM992690|pid:none) Candida dubliniensis CD36 chromo... 42 0.041
BC135612_1(BC135612|pid:none) Xenopus tropicalis outer dense fib... 42 0.041
FJ218592_1(FJ218592|pid:none) Drosophila melanogaster strain NC3... 42 0.041
CR382121_162(CR382121|pid:none) Kluyveromyces lactis strain NRRL... 42 0.041
CR380958_106(CR380958|pid:none) Candida glabrata strain CBS138 c... 42 0.041
DQ121376_27(DQ121376|pid:none) Uncultured bacterium clone YC01G1... 42 0.041
L03534_1(L03534|pid:none) Entamoeba histolytica myosin heavy cha... 42 0.041
CP000863_1221(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 42 0.041
AL834368_1(AL834368|pid:none) Homo sapiens mRNA; cDNA DKFZp762M1... 42 0.041
BC103499_1(BC103499|pid:none) Homo sapiens chromosome 10 open re... 42 0.041
CP001283_541(CP001283|pid:none) Bacillus cereus AH820, complete ... 42 0.041
CP000728_2381(CP000728|pid:none) Clostridium botulinum F str. La... 42 0.041
CP001230_69(CP001230|pid:none) Persephonella marina EX-H1, compl... 42 0.041
AE017198_820(AE017198|pid:none) Lactobacillus johnsonii NCC 533,... 42 0.041
Z48239_7(Z48239|pid:none) S.cerevisiae chromosome XV left arm DN... 42 0.041
AJ786380_1(AJ786380|pid:none) Cryptosporidium parvum mt1 gene fo... 42 0.041
BC135451_1(BC135451|pid:none) Xenopus tropicalis hypothetical pr... 42 0.041
FJ218601_1(FJ218601|pid:none) Drosophila melanogaster strain NC7... 42 0.041
AM910993_318(AM910993|pid:none) Plasmodium knowlesi strain H chr... 42 0.041
CP000498_672(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 42 0.041
CP001259_38(CP001259|pid:none) Borrelia burgdorferi 156a plasmid... 42 0.041
AJ488495_1(AJ488495|pid:none) Oryza sativa mRNA for SMC4 protein. 42 0.041
(P89105) RecName: Full=RNA polymerase-associated protein CTR9; A... 42 0.041
CP000061_409(CP000061|pid:none) Aster yellows witches'-broom phy... 42 0.041
AX047235_1(AX047235|pid:none) Sequence 1 from Patent WO0068404. 42 0.041
FJ218581_1(FJ218581|pid:none) Drosophila melanogaster strain NC3... 42 0.041
CP001182_1340(CP001182|pid:none) Acinetobacter baumannii AB0057,... 42 0.041
CP001581_2583(CP001581|pid:none) Clostridium botulinum A2 str. K... 42 0.041
EF494747_1(EF494747|pid:none) Streptococcus pyogenes strain E605... 42 0.041
AF499596_46(AF499596|pid:none) Phthorimaea operculella granulovi... 42 0.041
(O44199) RecName: Full=DNA repair protein rad-50; EC=3.... 42 0.041
FJ218599_1(FJ218599|pid:none) Drosophila melanogaster strain MW6... 42 0.041
CP000102_1059(CP000102|pid:none) Methanosphaera stadtmanae DSM 3... 42 0.041
BC046212_1(BC046212|pid:none) Homo sapiens, Similar to cytomatri... 42 0.041
(O97237) RecName: Full=GRIP and coiled-coil domain-containing pr... 42 0.053
BX842596_7(BX842596|pid:none) Neurospora crassa DNA linkage grou... 42 0.053
AF273058_1(AF273058|pid:none) Homo sapiens CTAGE-2 mRNA, complet... 42 0.053
AB236854_1(AB236854|pid:none) Trifolium pratense RNA for putativ... 42 0.053
T26569(T26569)hypothetical protein Y26D4A.9 - Caenorhabditis ele... 42 0.053
AK313793_1(AK313793|pid:none) Homo sapiens cDNA, FLJ94407, highl... 42 0.053
AB209996_1(AB209996|pid:none) Homo sapiens mRNA for CENPE varian... 42 0.053
EU841912_1(EU841912|pid:none) Xenopus laevis smooth muscle myosi... 42 0.053
AK294180_1(AK294180|pid:none) Homo sapiens cDNA FLJ59676 complet... 42 0.053
AL844504_46(AL844504|pid:none) Plasmodium falciparum 3D7 chromos... 42 0.053
(Q9H2F9) RecName: Full=Coiled-coil domain-containing protein 68;... 42 0.053
AM910996_58(AM910996|pid:none) Plasmodium knowlesi strain H chro... 42 0.053
(P08964) RecName: Full=Myosin-1; AltName: Full=Type II myosin; ... 42 0.053
(Q9Z2Y3) RecName: Full=Homer protein homolog 1; AltName: Full=VA... 42 0.053
AK302725_1(AK302725|pid:none) Homo sapiens cDNA FLJ60377 complet... 42 0.053
(Q19286) RecName: Full=Intermediate filament protein ifb-2; AltN... 42 0.053
CR382125_58(CR382125|pid:none) Kluyveromyces lactis strain NRRL ... 42 0.053
CP001175_2528(CP001175|pid:none) Listeria monocytogenes HCC23, c... 42 0.053
CP001615_2868(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 42 0.053
D86970_1(D86970|pid:none) Homo sapiens mRNA for KIAA0216 gene, c... 42 0.053
S28261(S28261) centromere protein E - human &Z15005_1(Z15005|pi... 42 0.053
AK302505_1(AK302505|pid:none) Homo sapiens cDNA FLJ60372 complet... 42 0.053
EU841911_1(EU841911|pid:none) Xenopus laevis smooth muscle myosi... 42 0.053
AY916778_1(AY916778|pid:none) Danio rerio ELKS mRNA, complete cds. 42 0.053
T16016(T16016)hypothetical protein F10C1.7b - Caenorhabditis ele... 42 0.053
AP007161_144(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 42 0.053
CP000939_3134(CP000939|pid:none) Clostridium botulinum B1 str. O... 42 0.053
AB177860_1(AB177860|pid:none) Homo sapiens mRNA for KIAA0216 spl... 42 0.053
CP000675_2650(CP000675|pid:none) Legionella pneumophila str. Cor... 42 0.053
CP000806_3151(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 42 0.053
AB004801_1(AB004801|pid:none) Gallus gallus mRNA for chick atria... 42 0.053
BC171689_1(BC171689|pid:none) Danio rerio ELKS, mRNA (cDNA clone... 42 0.053
(Q5R9B3) RecName: Full=Uncharacterized protein C10orf118 homolog... 42 0.053
AB177858_1(AB177858|pid:none) Homo sapiens mRNA for KIAA0216 spl... 42 0.053
U49831_2(U49831|pid:none) Caenorhabditis elegans cosmid F10C1, c... 42 0.053
BA000016_216(BA000016|pid:none) Clostridium perfringens str. 13 ... 42 0.053
AY166677_1(AY166677|pid:none) Plasmodium reichenowi reticulocyte... 42 0.053
CP001083_2568(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 42 0.053
X78553_1(X78553|pid:none) C.elegans (Bristol N2) IF B2 gene, exo... 42 0.053
FJ218573_1(FJ218573|pid:none) Drosophila simulans strain md106 c... 42 0.053
CP001047_207(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 42 0.053
CR859476_1(CR859476|pid:none) Pongo abelii mRNA; cDNA DKFZp459G1... 42 0.053
AE001584_44(AE001584|pid:none) Borrelia burgdorferi B31 plasmid ... 42 0.053
AM910996_691(AM910996|pid:none) Plasmodium knowlesi strain H chr... 42 0.053
CR382139_551(CR382139|pid:none) Debaryomyces hansenii strain CBS... 42 0.053
AL031745_83(AL031745|pid:none) Plasmodium falciparum DNA from MA... 42 0.053
AY902464_1(AY902464|pid:none) Xenopus laevis TPR (TPR) mRNA, par... 42 0.070
AY810094_1(AY810094|pid:none) Schistosoma japonicum SJCHGC07086 ... 42 0.070
BA000016_1884(BA000016|pid:none) Clostridium perfringens str. 13... 42 0.070
AK228666_1(AK228666|pid:none) Arabidopsis thaliana mRNA for puta... 42 0.070
CP001279_365(CP001279|pid:none) Nautilia profundicola AmH, compl... 42 0.070
CP000726_2220(CP000726|pid:none) Clostridium botulinum A str. AT... 42 0.070
CP000903_464(CP000903|pid:none) Bacillus weihenstephanensis KBAB... 42 0.070
AK220480_1(AK220480|pid:none) Mus musculus mRNA for mKIAA4087 pr... 42 0.070
AC007357_25(AC007357|pid:none) Arabidopsis thaliana chromosome 1... 42 0.070
CP000609_236(CP000609|pid:none) Methanococcus maripaludis C5, co... 42 0.070
CP001078_2653(CP001078|pid:none) Clostridium botulinum E3 str. A... 42 0.070
AM502221_16(AM502221|pid:none) Leishmania infantum chromosome 3. 42 0.070
AP009484_919(AP009484|pid:none) Macrococcus caseolyticus JCSC540... 42 0.070
(Q66GS9) RecName: Full=Centrosomal protein of 135 kDa; ... 42 0.070
BC136535_1(BC136535|pid:none) Homo sapiens centrosomal protein 1... 42 0.070
BC074706_1(BC074706|pid:none) Xenopus tropicalis ribosome bindin... 42 0.070
CR380958_523(CR380958|pid:none) Candida glabrata strain CBS138 c... 42 0.070
(Q15643) RecName: Full=Thyroid receptor-interacting protein 11; ... 42 0.070
(A9KPP4) RecName: Full=DNA replication and repair protein recF; ... 42 0.070
CP000102_1058(CP000102|pid:none) Methanosphaera stadtmanae DSM 3... 42 0.070
CR548612_182(CR548612|pid:none) Paramecium tetraurelia macronucl... 42 0.070
CR933614_1(CR933614|pid:none) Homo sapiens mRNA; cDNA DKFZp686L0... 42 0.070
BX641024_1(BX641024|pid:none) Homo sapiens mRNA; cDNA DKFZp686C0... 42 0.070
CP000312_189(CP000312|pid:none) Clostridium perfringens SM101, c... 42 0.070
CP001407_472(CP001407|pid:none) Bacillus cereus 03BB102, complet... 42 0.070
(Q5M7B7) RecName: Full=Optineurin; &BC088724_1(BC088724|pid:none) 42 0.070
AB221084_1(AB221084|pid:none) Tetrahymena thermophila MYO13 mRNA... 42 0.070
AM910995_58(AM910995|pid:none) Plasmodium knowlesi strain H chro... 42 0.070
(Q5ZMV2) RecName: Full=Spindle assembly abnormal protein 6 homol... 42 0.070
AC007862_22(AC007862|pid:none) Trypanosoma brucei chromosome 2 c... 42 0.070
(Q60675) RecName: Full=Laminin subunit alpha-2; AltName: Full=La... 42 0.070
CP000312_1813(CP000312|pid:none) Clostridium perfringens SM101, ... 42 0.070
BC172647_1(BC172647|pid:none) Synthetic construct Mus musculus c... 42 0.070
AY913766_1(AY913766|pid:none) Xenopus laevis ventricular myosin ... 41 0.091
CR932234_1(CR932234|pid:none) Structural maintenance of chromoso... 41 0.091
U66796_1(U66796|pid:none) Human laminin alpha 2 chain (LAMA2) ge... 41 0.091
AX045097_1(AX045097|pid:none) Sequence 5 from Patent WO0066730. ... 41 0.091
AK148283_1(AK148283|pid:none) Mus musculus B16 F10Y cells cDNA, ... 41 0.091
Z81118_6(Z81118|pid:none) Caenorhabditis elegans Cosmid T10G3, c... 41 0.091
CR940352_631(CR940352|pid:none) Theileria annulata strain Ankara... 41 0.091
AK029581_1(AK029581|pid:none) Mus musculus adult male testis cDN... 41 0.091
(Q8N1H7) RecName: Full=Protein SIX6OS1; AltName: Full=Six6 oppos... 41 0.091
CP000939_2369(CP000939|pid:none) Clostridium botulinum B1 str. O... 41 0.091
FJ218597_1(FJ218597|pid:none) Drosophila melanogaster strain MW5... 41 0.091
FJ218598_1(FJ218598|pid:none) Drosophila melanogaster strain MW6... 41 0.091
FJ218593_1(FJ218593|pid:none) Drosophila melanogaster strain MW3... 41 0.091
AY803272_1(AY803272|pid:none) Homo sapiens AKAP9-BRAF fusion pro... 41 0.091
FJ218577_1(FJ218577|pid:none) Drosophila melanogaster strain MW2... 41 0.091
AK315304_1(AK315304|pid:none) Homo sapiens cDNA, FLJ96331, highl... 41 0.091
(Q75AF5) RecName: Full=Golgin IMH1; &AE016817_363(AE016817|pid:... 41 0.091
AF324061_1(AF324061|pid:none) Streptococcus pyogenes IgG Fc rece... 41 0.091
CR380954_43(CR380954|pid:none) Candida glabrata strain CBS138 ch... 41 0.091
T30336(T30336) nuclear/mitotic apparatus protein - African clawe... 41 0.091
AC159449_38(AC159449|pid:none) Trypanosoma brucei chromosome 4 c... 41 0.091
AB297457_1(AB297457|pid:none) Molgula tectiformis myomegalin mRN... 41 0.091
AY139402_1(AY139402|pid:none) Streptococcus pyogenes isolate ES7... 41 0.091
AB208922_1(AB208922|pid:none) Homo sapiens mRNA for laminin alph... 41 0.091
(Q7ZW63) RecName: Full=Kinetochore protein Nuf2; AltName: Full=C... 41 0.091
AE016877_3053(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 41 0.091
FJ362365_11(FJ362365|pid:none) Caenorhabditis brenneri contig JD... 41 0.091
BX908398_3(BX908398|pid:none) Zebrafish DNA sequence from clone ... 41 0.091
AC008153_25(AC008153|pid:none) Arabidopsis thaliana chromosome 3... 41 0.091
BC125070_1(BC125070|pid:none) Homo sapiens chromosome 14 open re... 41 0.091
FJ218580_1(FJ218580|pid:none) Drosophila melanogaster strain NC3... 41 0.091
(Q6AXS3) RecName: Full=Protein DEK; &BC079344_1(BC079344|pid:no... 41 0.091
AF412084_1(AF412084|pid:none) Arabidopsis thaliana AT3g11590/F24... 41 0.091
AB019228_19(AB019228|pid:none) Arabidopsis thaliana genomic DNA,... 41 0.091
AY129432_1(AY129432|pid:none) Drosophila melanogaster GM04379 fu... 41 0.091
AE017354_2442(AE017354|pid:none) Legionella pneumophila subsp. p... 41 0.091
(Q811D2) RecName: Full=Ankyrin repeat domain-containing protein ... 41 0.091
CR382133_505(CR382133|pid:none) Debaryomyces hansenii strain CBS... 41 0.091
CP000084_1312(CP000084|pid:none) Candidatus Pelagibacter ubique ... 41 0.091
CP001104_908(CP001104|pid:none) Eubacterium eligens ATCC 27750, ... 41 0.091
T03792(T03792) kinesin-related protein tck1 - common tobacco &U... 41 0.091
AM910987_23(AM910987|pid:none) Plasmodium knowlesi strain H chro... 41 0.091
AM428343_3(AM428343|pid:none) Vitis vinifera contig VV78X194729.... 41 0.091
MMHUMH(PX0082;A35899;A38970;S14461)laminin alpha-2 chain - human... 41 0.091
AF083037_1(AF083037|pid:none) Homo sapiens A-kinase anchoring pr... 41 0.091
T24806(T24806)hypothetical protein T10G3.5 - Caenorhabditis eleg... 41 0.091
BC135970_1(BC135970|pid:none) Xenopus tropicalis hypothetical pr... 41 0.091
CP001291_4282(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 41 0.091
AF541925_1(AF541925|pid:none) Rattus norvegicus ERC2 mRNA, compl... 41 0.091
AF026245_1(AF026245|pid:none) Homo sapiens yotiao mRNA, complete... 41 0.091
AY032860_1(AY032860|pid:none) Caenorhabditis elegans EEA1 mRNA, ... 41 0.091
S52536(S52536) fcrA 15 protein - Streptococcus pyogenes &S75411... 41 0.091
(P24043) RecName: Full=Laminin subunit alpha-2; AltName: Full=La... 41 0.091
AE014188_63(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 41 0.091
AB019691_1(AB019691|pid:none) Homo sapiens mRNA for Centrosome- ... 41 0.091
AF039187_1(AF039187|pid:none) Schistosoma japonicum myosin mRNA,... 41 0.091
AX045099_1(AX045099|pid:none) Sequence 7 from Patent WO0066730. 41 0.091
AJ131693_1(AJ131693|pid:none) Homo sapiens mRNA for AKAP450 prot... 41 0.091
FM992690_496(FM992690|pid:none) Candida dubliniensis CD36 chromo... 41 0.091
FJ218586_1(FJ218586|pid:none) Drosophila melanogaster strain NC3... 41 0.091
DQ177346_64(DQ177346|pid:none) Koi herpesvirus strain KHV-I, com... 41 0.091
AK173096_1(AK173096|pid:none) Mus musculus premature mRNA for mK... 41 0.091
AM946636_1(AM946636|pid:none) Helicobacter pylori ORF2 DNA for h... 41 0.12
CP001283_3162(CP001283|pid:none) Bacillus cereus AH820, complete... 41 0.12
AY176327_73(AY176327|pid:none) Staphylococcus phage K, complete ... 41 0.12
AM502247_150(AM502247|pid:none) Leishmania infantum chromosome 29. 41 0.12
FJ882854_56(FJ882854|pid:none) Bombyx mandarina nucleopolyhedrov... 41 0.12
DQ149243_2(DQ149243|pid:none) Lactococcus lactis plasmid pSK11B,... 41 0.12
(Q8MJV1) RecName: Full=Myosin-2; AltName: Full=Myosin heavy chai... 41 0.12
CR382123_126(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 41 0.12
BX640994_1(BX640994|pid:none) Homo sapiens mRNA; cDNA DKFZp686F0... 41 0.12
CU928174_15(CU928174|pid:none) Zygosaccharomyces rouxii strain C... 41 0.12
(A6LD62) RecName: Full=2',3'-cyclic-nucleotide 2'-phosphodiester... 41 0.12
BC138734_1(BC138734|pid:none) Mus musculus leucine rich repeat a... 41 0.12
U29585_1(U29585|pid:none) Streptococcus pyogenes emm18.1 gene, c... 41 0.12
AP008971_76(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA, ... 41 0.12
AM494959_67(AM494959|pid:none) Leishmania braziliensis chromosom... 41 0.12
DQ657948_64(DQ657948|pid:none) Koi herpesvirus strain KHV-U, com... 41 0.12
CP001078_2149(CP001078|pid:none) Clostridium botulinum E3 str. A... 41 0.12
(Q6NU11) RecName: Full=Charged multivesicular body protein 6-B; ... 41 0.12
CP001047_351(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 41 0.12
AB007688_1(AB007688|pid:none) Rattus norvegicus mRNA for Vesl-1L... 41 0.12
(P32380) RecName: Full=Protein NUF1; AltName: Full=Spindle poly ... 41 0.12
AY189943_1(AY189943|pid:none) Rattus norvegicus HOMER1G (Homer1)... 41 0.12
(Q7TT49) RecName: Full=Serine/threonine-protein kinase MRCK beta... 41 0.12
T18484(T18484)hypothetical protein C0850c - malaria parasite (Pl... 41 0.12
CP001047_47(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, c... 41 0.12
AE014186_259(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 41 0.12
AY203926_1(AY203926|pid:none) Homo sapiens FP17425 mRNA, complet... 41 0.12
BC061202_1(BC061202|pid:none) Mus musculus leucine rich repeat a... 41 0.12
BC051363_1(BC051363|pid:none) Homo sapiens CTAGE family, member ... 41 0.12
AF027728_1(AF027728|pid:none) Xenopus laevis kinesin-related pro... 41 0.12
AK157974_1(AK157974|pid:none) Mus musculus adult inner ear cDNA,... 41 0.12
AE014187_250(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 41 0.12
AE001362_187(AE001362|pid:none) Plasmodium falciparum 3D7 chromo... 41 0.12
AE017196_413(AE017196|pid:none) Wolbachia endosymbiont of Drosop... 41 0.12
CP000246_1928(CP000246|pid:none) Clostridium perfringens ATCC 13... 41 0.12
AE000657_847(AE000657|pid:none) Aquifex aeolicus VF5, complete g... 41 0.12
B84709(B84709) hypothetical protein At2g30500 [imported] - Arabi... 41 0.12
AJ298076_1(AJ298076|pid:none) Mus musculus partial Tpr gene for ... 41 0.12
AK173256_1(AK173256|pid:none) Mus musculus mRNA for mKIAA1764 pr... 41 0.12
AC003027_24(AC003027|pid:none) Arabidopsis thaliana chromosome I... 41 0.12
AE016827_865(AE016827|pid:none) Mannheimia succiniciproducens MB... 41 0.12
CU469464_56(CU469464|pid:none) Candidatus Phytoplasma mali strai... 41 0.12
CP001147_631(CP001147|pid:none) Thermodesulfovibrio yellowstonii... 41 0.12
AP007151_1105(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 41 0.12
(Q69ZB0) RecName: Full=Leucine-rich repeat and coiled-coil domai... 41 0.12
AK227505_1(AK227505|pid:none) Arabidopsis thaliana mRNA for hypo... 41 0.12
AL844508_36(AL844508|pid:none) Plasmodium falciparum 3D7 chromos... 41 0.12
AE017355_451(AE017355|pid:none) Bacillus thuringiensis serovar k... 41 0.12
CP000764_2556(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 41 0.12
CP000568_2590(CP000568|pid:none) Clostridium thermocellum ATCC 2... 41 0.12
AY229987_101(AY229987|pid:none) Cryptophlebia leucotreta granulo... 41 0.12
AL929518_1(AL929518|pid:none) Zebrafish DNA sequence from clone ... 41 0.12
A45627(A45627;B45526) myosin heavy chain [similarity] - nematode... 41 0.12

>AC116957_105(AC116957|pid:none) Dictyostelium discoideum chromosome 2
map 1685067-2090751 strain AX4, complete sequence.
Length = 915

Score = 395 bits (1016), Expect(2) = e-115
Identities = 205/245 (83%), Positives = 209/245 (85%)
Frame = +1

Query: 619 KSITREIXXXXKEFESMLATNDNLAXXXXXXXXXXXXXXXXXXXHIADGANKVSDHDHEQ 798
K + +++ KEFESMLATNDNLA HIADGANKVSDHDHEQ
Sbjct: 656 KDMEKKVKDLGKEFESMLATNDNLAKELEESQQQLSKSNQLLNQHIADGANKVSDHDHEQ 715

Query: 799 LLKELNDLKSKNKEIDDRIQQERQQWHSNRWEIVAELEQEKSKYKKSQDLLLDEKRRMGV 978
LLKELNDLKSKNKEIDDRIQQERQQWHSNRWEIVAELEQEKSKYKKSQDLLLDEKRRMGV
Sbjct: 716 LLKELNDLKSKNKEIDDRIQQERQQWHSNRWEIVAELEQEKSKYKKSQDLLLDEKRRMGV 775

Query: 979 VGKTVSKLLEDNEKRSFDSMTPESFYAMLEAAKKELDEGLQHRKQYYDDEDLNGQLLMER 1158
VGKTVSKLLEDNEKRSFDSMTPESFYAMLEAAKKELDEGLQHRKQYYDDEDLNGQLLMER
Sbjct: 776 VGKTVSKLLEDNEKRSFDSMTPESFYAMLEAAKKELDEGLQHRKQYYDDEDLNGQLLMER 835

Query: 1159 EARRLAESQVEHFAVLLEKSKVEIQKYKEIIXXXXXXXXXXXKSGFFSNLMNNTSNNSFI 1338
EARRLAESQVEHFAVLLEKSKVEIQKYKEII KSGFFSNLMNNTSNNSFI
Sbjct: 836 EARRLAESQVEHFAVLLEKSKVEIQKYKEIINNGGANNNNNNKSGFFSNLMNNTSNNSFI 895

Query: 1339 KRTFT 1353
KRTFT
Sbjct: 896 KRTFT 900

Score = 44.3 bits (103), Expect(2) = e-115
Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 11/173 (6%)
Frame = +2

Query: 53 EKKNDAQVLKEQVKGTFDQYMPISLQTKEKSKRVKAQITDLKDENSKLLKETKKFQNRIN 232
EK+ Q L+EQ++ T ++ I+ Q + +V+ Q L+ EN + + + +
Sbjct: 468 EKELKIQQLEEQLEQTKEELTSITRQLQ----KVEVQRESLEHENESIREMVSQSSIKGL 523

Query: 233 EE--SSVLDVLQEEAHLLK-------KIVNDKDAEIKTLNQTIYDQHESIKKLKEEVEKE 385
+E +S + Q++ L + DKD EI+ LN+T I KL+ E++ E
Sbjct: 524 DELIASQKETYQKDVQTLNFTLLEKNNTIQDKDKEIQQLNET-------ISKLQSEIQDE 576

Query: 386 QNNVTMQIELKE--LLKQSENKLLLELTSVKDTLLIESQSHLQVKGILKETED 538
++ + Q++ +E LL E K + +V+D + E + +V G LK D
Sbjct: 577 KDKLEQQVKQREQDLLNFQEEKERINRKNVEDQVDSEQVTE-KVVGDLKHIID 628

Score = 318 bits (814), Expect = 4e-85
Identities = 170/202 (84%), Positives = 176/202 (87%)
Frame = +2

Query: 32 MSSPYPSEKKNDAQVLKEQVKGTFDQYMPISLQTKEKSKRVKAQITDLKDENSKLLKETK 211
MSSPYPSEKKNDAQVLKEQVKGTFDQYMPISLQTKEKSKRVKAQITDLKDENSKLLKETK
Sbjct: 1 MSSPYPSEKKNDAQVLKEQVKGTFDQYMPISLQTKEKSKRVKAQITDLKDENSKLLKETK 60

Query: 212 KFQNRINEESSVLDVLQEEAHLLKKIVNDKDAEIKTLNQTIYDQHESIKKLKEEVEKEQN 391
KFQNR+ EESS+L LQ+EAHLLKKIVN+K+ EIKTLNQTIYDQH+SIKKLKEEVEKEQN
Sbjct: 61 KFQNRLIEESSLLYFLQKEAHLLKKIVNNKNPEIKTLNQTIYDQHKSIKKLKEEVEKEQN 120

Query: 392 NVTMQIELKELLKQSENKLLLELTSVKDTLLIESQSHLQVKGILKETEDXXXXXXXXXXX 571
NVTMQIELKELLKQSENKLLLELTSVKDTLLIESQSHLQVKGILKETED
Sbjct: 121 NVTMQIELKELLKQSENKLLLELTSVKDTLLIESQSHLQVKGILKETEDKLEQEIKINKE 180

Query: 572 XXXXXXXXXXXHKDSINQLQER 637
HKDSINQLQER
Sbjct: 181 KLEKLDKEINEHKDSINQLQER 202

Score = 44.7 bits (104), Expect = 0.008
Identities = 42/179 (23%), Positives = 87/179 (48%), Gaps = 20/179 (11%)
Frame = +2

Query: 50 SEKKNDAQVLKEQVKGTFDQYMPISLQTKEKSK-------RVKAQITDLKDENSKLLKET 208
+E K+ L+E+++ T DQ + +EKSK +++ + +++ ++ E
Sbjct: 190 NEHKDSINQLQERLESTQDQLSKSQQENQEKSKDIEELKSQLELNLQEIERLKIEINSEK 249

Query: 209 KKFQNRINEESSVLDVLQEEAHLLKKIVNDKDA------EIKTLNQTIYDQHESIKKLKE 370
+KF+N + + +++ +E L++ V KD E+K NQ I + E + +
Sbjct: 250 QKFENLQDTYNQLIEKNKEIIKSLEEEVKIKDELQIALNELKEKNQEITEIKEKEEIKNQ 309

Query: 371 EVEKEQNNVTMQI-ELKELLKQSENKL------LLELTSVKDTLLIESQSHLQVKGILK 526
E+ KE +T+++ + ++ K +E+K+ + +L K TL E Q K IL+
Sbjct: 310 ELTKENQELTLELTQSQQQNKDNESKINQHQETIEQLEQEKQTLQNELNKFEQDKEILE 368

Score = 34.7 bits (78), Expect = 8.5
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 12/165 (7%)
Frame = +1

Query: 793 EQLLKELNDLKSKNKEIDDRIQQE---RQQWHSNRWEIVAELEQEKSKYKKSQDLLLDEK 963
++L LN+LK KN+EI + ++E Q+ E+ EL Q + + K D +
Sbjct: 281 DELQIALNELKEKNQEITEIKEKEEIKNQELTKENQELTLELTQSQQQNK-------DNE 333

Query: 964 RRMGVVGKTVSKLLEDNEKRSFDSMTPESFYAMLEAAKKELDEGLQHRKQYYDD-EDLNG 1140
++ +T+ +L ++ + + E +LEA K L L ++ D+ L
Sbjct: 334 SKINQHQETIEQLEQEKQTLQNELNKFEQDKEILEANIKTLTIELDNKVMEVDELSQLRS 393

Query: 1141 QLLMEREARRLAE--------SQVEHFAVLLEKSKVEIQKYKEII 1251
L +E E R + Q++ LE+ K +IQ+ ++ I
Sbjct: 394 NLNLEIECVRKSHIKEMEELTLQIQQLQQHLEQDKNDIQQREQEI 438

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,565,448,167
Number of extensions: 25924634
Number of successful extensions: 140046
Number of sequences better than 10.0: 2407
Number of HSP's gapped: 137443
Number of HSP's successfully gapped: 3163
Length of query: 467
Length of database: 1,040,966,779
Length adjustment: 132
Effective length of query: 335
Effective length of database: 618,001,159
Effective search space: 207030388265
Effective search space used: 207030388265
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.86 gvh: 0.22 alm: 0.51 top: 0.60 tms: 0.00 mit: 0.32 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: cytoplasmic
36.0 %: nuclear
12.0 %: cytoskeletal
8.0 %: mitochondrial
4.0 %: plasma membrane
4.0 %: peroxisomal

>> prediction for Contig-U11377-1 is cyt

VS (DIR, S) 0
VH (FL, L) 1
VF (FL, S) 0
AH (FL, L) 2
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0