| Contig-U11369-1 |
| Contig ID |
Contig-U11369-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1090 |
| Chromosome number (1..6, M) |
4 |
| Chromosome length |
5430582 |
| Start point |
1792951 |
| End point |
1791861 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
29 |
| Number of EST |
45 |
| Link to clone list |
U11369 |
| List of clone(s) |
est1=VHJ887F,1,193
est2=VHM715F,2,193
est3=VHJ801F,10,193
est4=VHK814F,10,193
est5=VHM529F,10,193
est6=VHP601F,10,193
est7=VHK484F,14,193
est8=VHB555F,16,193
est9=VHH274F,20,193
est10=VHP416F,22,193
est11=AHN187F,24,193
est12=VHH879F,25,193
est13=VHP384F,28,193
est14=VHL374F,34,193
est15=AHH196F,47,193
est16=VHQ322F,80,193
est17=VHJ801Z,194,664
est18=VHA888Z,323,1088
est19=VHP384Z,325,835
est20=AHL695Z,350,872
est21=AHP368Z,350,838
est22=VHJ887Z,351,834
est23=VHP601Z,354,837
est24=VHK286Z,355,1082
est25=VHM111Z,356,1091
est26=VHM715Z,356,879
est27=VHK484Z,359,871
est28=VHK814Z,361,836
est29=AHF860Z,368,1001
est30=VHK364Z,373,1092
est31=CHQ783Z,376,1113
est32=VHB555Z,376,848
est33=VHN809Z,376,1008
est34=AHN187Z,379,874
est35=AHK568Z,382,953
est36=VHH879Z,383,858
est37=VHL374Z,385,867
est38=VHP416Z,385,844
est39=VHQ322Z,387,913
est40=AHH196Z,399,898
est41=AHQ602Z,400,1043
est42=VHM529Z,400,842
est43=VHL717Z,401,1087
est44=VHB527Z,440,833
est45=VHH274Z,589,851
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.24 |
| Homology vs DNA |
Query= Contig-U11369-1 (Contig-U11369-1Q) /CSM_Contig/Contig-U11369-1Q.Seq.d
(1100 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ437026) Dictyostelium discoideum cDNA clone:ddv32p22, 3' ... 1455 0.0 1
(BJ443093) Dictyostelium discoideum cDNA clone:ddv51k22, 3' ... 1394 0.0 1
(BJ444046) Dictyostelium discoideum cDNA clone:ddv55e03, 3' ... 1384 0.0 1
(BJ385686) Dictyostelium discoideum cDNA clone:ddc55f21, 3' ... 1358 0.0 1
(BJ443037) Dictyostelium discoideum cDNA clone:ddv51p15, 3' ... 1350 0.0 1
(BJ357583) Dictyostelium discoideum cDNA clone:dda64c02, 3' ... 1257 0.0 1
(BJ351259) Dictyostelium discoideum cDNA clone:dda42h16, 3' ... 1257 0.0 1
(BJ444958) Dictyostelium discoideum cDNA clone:ddv58b04, 3' ... 1251 0.0 1
(BJ443752) Dictyostelium discoideum cDNA clone:ddv54b05, 3' ... 1237 0.0 2
(BJ354114) Dictyostelium discoideum cDNA clone:dda52g17, 3' ... 1082 0.0 1
(BJ446577) Dictyostelium discoideum cDNA clone:ddv63l05, 3' ... 1045 0.0 1
(BJ354839) Dictyostelium discoideum cDNA clone:dda54m24, 3' ... 1019 0.0 1
(BJ446159) Dictyostelium discoideum cDNA clone:ddv61h21, 3' ... 1013 0.0 1
(BJ444376) Dictyostelium discoideum cDNA clone:ddv56n03, 3' ... 991 0.0 1
(BJ443080) Dictyostelium discoideum cDNA clone:ddv51h22, 3' ... 977 0.0 1
(BJ446199) Dictyostelium discoideum cDNA clone:ddv62a02, 3' ... 959 0.0 1
(BJ442776) Dictyostelium discoideum cDNA clone:ddv50n22, 3' ... 959 0.0 1
(BJ352190) Dictyostelium discoideum cDNA clone:dda45o23, 3' ... 959 0.0 1
(BJ443686) Dictyostelium discoideum cDNA clone:ddv53d19, 3' ... 957 0.0 1
(BJ355693) Dictyostelium discoideum cDNA clone:dda57m21, 3' ... 952 0.0 1
(BJ441511) Dictyostelium discoideum cDNA clone:ddv46n20, 3' ... 944 0.0 1
(BJ443184) Dictyostelium discoideum cDNA clone:ddv52l04, 3' ... 938 0.0 1
(BJ437567) Dictyostelium discoideum cDNA clone:ddv34m13, 3' ... 807 0.0 2
(BJ445967) Dictyostelium discoideum cDNA clone:ddv61p04, 3' ... 906 0.0 1
(BJ356834) Dictyostelium discoideum cDNA clone:dda61h17, 3' ... 902 0.0 1
(BJ442477) Dictyostelium discoideum cDNA clone:ddv50b02, 3' ... 876 0.0 1
(BJ444428) Dictyostelium discoideum cDNA clone:ddv56i07, 3' ... 872 0.0 1
(BJ437447) Dictyostelium discoideum cDNA clone:ddv34e07, 3' ... 708 0.0 1
(BJ441130) Dictyostelium discoideum cDNA clone:ddv45c20, 3' ... 521 e-143 1
(CX093654) EHAFO18TR E. histolytica Normalized cDNA library ... 50 7e-06 3
(AE006302) Lactococcus lactis subsp. lactis IL1403 section 6... 54 4e-04 3
(AM674414) Entamoeba terrapinae GSS, clone terra276g07.p1k. 40 5e-04 3
(EX301923) 1616480_5_A14_063 PY06 Carica papaya cDNA, mRNA s... 42 0.001 3
(AM738686) Cucumis melo subsp. melo EST, clone 15d_27-D06-M13R. 46 0.038 2
(AM737409) Cucumis melo subsp. melo EST, clone 15d_29-G02-M13R. 46 0.041 2
(FD792832) 08VNAA8_T7_014_H04_10MAR2006_018 08VNAA8 Phaseolu... 42 0.087 2
(FG899992) UCRVU08_CCNS16195_b1 Cowpea IT97K-461-4 Mixed Tis... 42 0.17 2
(FG883974) UCRVU07_CCNP15667_g1 Cowpea UCR 779 Mixed Tissue ... 42 0.18 2
(CL803909) OR_CBa0016L12.f OR_CBa Oryza rufipogon genomic cl... 50 0.18 1
(FG939974) UCRVU09_CCNT16627_g1 Cowpea UCR 707 Mixed Tissue ... 42 0.18 2
(EV495005) sg035F10 Cotton Lambda Zap Express Library Gossyp... 34 0.61 3
(CC832281) ZMMBBb0184B11.f ZMMBBb Zea mays subsp. mays genom... 48 0.71 1
(BQ411087) GA__Ed0036F04f Gossypium arboreum 7-10 dpa fiber ... 34 0.87 3
(BQ410988) GA__Ed0036A01f Gossypium arboreum 7-10 dpa fiber ... 34 0.90 3
(ES851213) UFL_689_79 Cotton fiber 0-10 day post anthesis Go... 34 1.2 3
(ES850925) UFL_692_67 Cotton fiber 0-10 day post anthesis Go... 34 1.2 3
(AC114944) Homo sapiens chromosome 5 clone CTD-2558D23, WORK... 40 1.3 3
(CO083237) GR__Ea48D15.r GR__Ea Gossypium raimondii cDNA clo... 34 1.6 3
(DR996787) Mdas9009E01.g1 Apple_EST_Mdas Malus x domestica c... 34 1.9 2
(CV632073) Mdfrt3098d19.y1 Mdfrt Malus x domestica cDNA clon... 34 1.9 2
(CV627953) Mdfrt3107k12.y1 Mdfrt Malus x domestica cDNA clon... 34 1.9 2
(EB123079) 020815AARA010182HT (AARA) Royal Gala partially se... 34 1.9 2
(CT151413) Sus scrofa genomic clone PigE-148M24, genomic sur... 38 2.8 2
(AC141165) Rattus norvegicus clone CH230-212F20, WORKING DRA... 46 2.8 1
(AC114189) Rattus norvegicus clone CH230-228N19, *** SEQUENC... 46 2.8 1
(AC207947) Triticum aestivum clone TAACSPALLhA_1644E05, *** ... 46 2.8 1
(EJ027611) 1095454030944 Global-Ocean-Sampling_GS-26-01-01-1... 46 2.8 1
(EB522723) 296624 Pigtailed macaque ovary library Macaca nem... 46 2.8 1
(ES804960) UFL_644_75 Cotton fiber 0-10 day post anthesis Go... 34 2.9 3
(AC216662) Solanum lycopersicum chromosome 6 clone C06SLm004... 40 3.0 4
(EU029769) Stomoxys calcitrans isolate B cytochrome c oxidas... 32 3.5 3
(CU407156) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 4.7 4
(CV660067) tak22c05.y1 Hydra EST UCI 6 Hydra magnipapillata ... 32 7.3 2
>(BJ437026) Dictyostelium discoideum cDNA clone:ddv32p22, 3' end,
single read.
Length = 766
Score = 1455 bits (734), Expect = 0.0
Identities = 737/738 (99%)
Strand = Plus / Minus
Query: 333 ttggccgatgcagaggatgaaaatcgtttctatccaagaattgaaatcaccaaaactagc 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 ttggccgatgcagaggatgaaaatcgtttctatccaagaattgaaatcaccaaaactagc 707
Query: 393 aatttcaatgaactctctgatgatatcaagaccattctccatcgtttatacatctcttac 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 aatttcaatgaactctctgatgatatcaagaccattctccatcgtttatacatctcttac 647
Query: 453 tactatgaaagacaagaggaactttgggcacaaattgctcttcaacgtttacctttgatt 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tactatgaaagacaagaggaactttgggcacaaattgctcttcaacgtttacctttgatt 587
Query: 513 aaaggttgcacaaagatgttggtttgtggtgaagatttaggtatggttccaaaatgtgtt 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 aaaggttgcacaaagatgttggtttgtggtgaagatttaggtatggttccaaaatgtgtt 527
Query: 573 gagcctgtactcaacgatttaggtatccttggtttaagaattcaacgtatgccttccgat 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gagcctgtactcaacgatttaggtatccttggtttaagaattcaacgtatgccttccgat 467
Query: 633 tcaaataaagatttctatcatccaaatgaatattcctatctcactgtaaatactacctca 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tcaaataaagatttctatcatccaaatgaatattcctatctcactgtaaatactacctca 407
Query: 693 tctcatgatatgagtaccttgagaggttggtgggaagaagatagagctcgttctcaagtt 752
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 406 tctcatgatatgagtaccttgagagattggtgggaagaagatagagctcgttctcaagtt 347
Query: 753 ttctacaataaaatcttgggaatgtttggtgatgctccttacttttgtgaaccttatgtt 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ttctacaataaaatcttgggaatgtttggtgatgctccttacttttgtgaaccttatgtt 287
Query: 813 agtgaggccgttatcactcaacatttacattctcaatctatgatttcaatctttccaatt 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 agtgaggccgttatcactcaacatttacattctcaatctatgatttcaatctttccaatt 227
Query: 873 caagattggttcggtatctctagtgaatatggtagcagagatccaaaagaagaaaagatt 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 caagattggttcggtatctctagtgaatatggtagcagagatccaaaagaagaaaagatt 167
Query: 933 aatgaaccttcaaatccaatgcattattggagatatcgtatgcatatcaatttagaaacc 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 aatgaaccttcaaatccaatgcattattggagatatcgtatgcatatcaatttagaaacc 107
Query: 993 ttggttaacgatcatgatttcagtaaaaatattcaaagattaattttatcttcaaatcgt 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 ttggttaacgatcatgatttcagtaaaaatattcaaagattaattttatcttcaaatcgt 47
Query: 1053 aatttagattaaacaatc 1070
||||||||||||||||||
Sbjct: 46 aatttagattaaacaatc 29
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 975,286,063
Number of extensions: 55193532
Number of successful extensions: 4193875
Number of sequences better than 10.0: 64
Length of query: 1100
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1076
Effective length of database: 97,308,875,965
Effective search space: 104704350538340
Effective search space used: 104704350538340
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.29 |
| Homology vs Protein |
Query= Contig-U11369-1 (Contig-U11369-1Q) /CSM_Contig/Contig-U11369-1Q.Seq.d
(1100 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT055804_1(BT055804|pid:none) Zea mays full-length cDNA clone ZM... 281 3e-74
FJ664262_1(FJ664262|pid:none) Annona cherimola disproportionatin... 279 1e-73
AY081315_1(AY081315|pid:none) Arabidopsis thaliana 4-alpha-gluca... 271 3e-71
AY510449_1(AY510449|pid:none) Solanum tuberosum 4-alpha-glucanot... 263 6e-69
AP006841_3821(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 261 2e-68
CR626927_3520(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 261 3e-68
AE005176_696(AE005176|pid:none) Lactococcus lactis subsp. lactis... 251 3e-65
CP001577_181(CP001577|pid:none) Micromonas sp. RCC299 chromosome... 242 2e-62
CP000139_1346(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 238 4e-61
CP000425_648(CP000425|pid:none) Lactococcus lactis subsp. cremor... 231 4e-59
CP000591_215(CP000591|pid:none) Ostreococcus lucimarinus CCE9901... 220 6e-56
CR954211_229(CR954211|pid:none) Ostreococcus tauri strain OTTH05... 217 5e-55
CP000140_3(CP000140|pid:none) Parabacteroides distasonis ATCC 85... 215 3e-54
AP010656_444(AP010656|pid:none) Candidatus Azobacteroides pseudo... 207 4e-52
AE015924_670(AE015924|pid:none) Porphyromonas gingivalis W83, co... 187 6e-46
AM501008_1(AM501008|pid:none) Medicago truncatula var. truncatul... 83 2e-14
AM501027_1(AM501027|pid:none) Medicago truncatula var. truncatul... 82 4e-14
AM501007_1(AM501007|pid:none) Medicago truncatula var. truncatul... 80 1e-13
AM501011_1(AM501011|pid:none) Medicago truncatula var. truncatul... 80 1e-13
AM501022_1(AM501022|pid:none) Medicago tornata partial AGT gene ... 80 2e-13
AM501020_1(AM501020|pid:none) Medicago truncatula var. truncatul... 79 2e-13
AM501002_1(AM501002|pid:none) Medicago truncatula var. truncatul... 78 6e-13
BX908798_745(BX908798|pid:none) Parachlamydia-related symbiont U... 77 1e-12
BT036652_1(BT036652|pid:none) Zea mays full-length cDNA clone ZM... 77 1e-12
AM501000_1(AM501000|pid:none) Medicago truncatula var. truncatul... 76 2e-12
AM501019_1(AM501019|pid:none) Medicago truncatula var. truncatul... 75 5e-12
AM501024_1(AM501024|pid:none) Medicago truncatula var. truncatul... 74 9e-12
AP006861_551(AP006861|pid:none) Chlamydophila felis Fe/C-56 DNA,... 74 1e-11
AM501013_1(AM501013|pid:none) Medicago truncatula var. truncatul... 73 2e-11
AM501014_1(AM501014|pid:none) Medicago truncatula var. truncatul... 72 3e-11
CP001055_375(CP001055|pid:none) Elusimicrobium minutum Pei191, c... 72 3e-11
CR848038_437(CR848038|pid:none) Chlamydophila abortus strain S26... 72 4e-11
AM501009_1(AM501009|pid:none) Medicago truncatula var. truncatul... 72 4e-11
AM500999_1(AM500999|pid:none) Medicago truncatula var. truncatul... 71 6e-11
CP000051_89(CP000051|pid:none) Chlamydia trachomatis A/HAR-13, c... 71 8e-11
(O84089) RecName: Full=4-alpha-glucanotransferase; EC=2... 71 8e-11
FM872308_89(FM872308|pid:none) Chlamydia trachomatis JALI20 sero... 71 8e-11
(Q9PKU9) RecName: Full=4-alpha-glucanotransferase; EC=2... 69 2e-10
CP000383_2259(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 64 7e-09
CP000463_3613(CP000463|pid:none) Rhodopseudomonas palustris BisA... 62 5e-08
CP001157_2405(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 61 8e-08
FM180568_3661(FM180568|pid:none) Escherichia coli 0127:H6 E2348/... 59 2e-07
CU928158_3269(CU928158|pid:none) Escherichia fergusonii ATCC 354... 59 3e-07
CP000653_3794(CP000653|pid:none) Enterobacter sp. 638, complete ... 59 4e-07
BX571860_142(BX571860|pid:none) Photorhabdus luminescens subsp. ... 59 4e-07
CP000243_3836(CP000243|pid:none) Escherichia coli UTI89, complet... 59 4e-07
A86007(A86007) 4-alpha-glucanotransferase (amylomaltase) [import... 58 5e-07
EU893953_1(EU893953|pid:none) Escherichia coli strain TB182A 4-a... 58 5e-07
EU893950_1(EU893950|pid:none) Escherichia coli strain 493/89 4-a... 58 5e-07
AB019236_8(AB019236|pid:none) Arabidopsis thaliana genomic DNA, ... 58 7e-07
CP000822_4703(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 58 7e-07
CP001600_3537(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 58 7e-07
CP001113_3537(CP001113|pid:none) Salmonella enterica subsp. ente... 57 1e-06
CP001014_230(CP001014|pid:none) Thermoproteus neutrophilus V24St... 57 1e-06
CU651637_3290(CU651637|pid:none) Escherichia coli LF82 chromosom... 57 1e-06
AP009240_3683(AP009240|pid:none) Escherichia coli SE11 DNA, comp... 57 1e-06
CP000800_3706(CP000800|pid:none) Escherichia coli E24377A, compl... 57 1e-06
CP000266_3177(CP000266|pid:none) Shigella flexneri 5 str. 8401, ... 57 1e-06
CP001120_3569(CP001120|pid:none) Salmonella enterica subsp. ente... 56 2e-06
CP000388_1624(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 56 2e-06
CP001127_3447(CP001127|pid:none) Salmonella enterica subsp. ente... 56 2e-06
CP001138_3458(CP001138|pid:none) Salmonella enterica subsp. ente... 56 3e-06
CP000504_1295(CP000504|pid:none) Pyrobaculum islandicum DSM 4184... 56 3e-06
CP000886_4245(CP000886|pid:none) Salmonella enterica subsp. ente... 56 3e-06
M32793_2(M32793|pid:none) E.coli amylomaltase (malQ) gene, compl... 55 3e-06
AE014075_4100(AE014075|pid:none) Escherichia coli CFT073, comple... 55 3e-06
CP000857_3471(CP000857|pid:none) Salmonella enterica subsp. ente... 55 3e-06
CP000970_3547(CP000970|pid:none) Escherichia coli SMS-3-5, compl... 55 3e-06
AE014613_3718(AE014613|pid:none) Salmonella enterica subsp. ente... 55 3e-06
(P15977) RecName: Full=4-alpha-glucanotransferase; EC=2... 55 3e-06
CP000950_161(CP000950|pid:none) Yersinia pseudotuberculosis YPII... 55 4e-06
CP000647_3749(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 55 4e-06
CU928164_3870(CU928164|pid:none) Escherichia coli IAI39 chromoso... 55 4e-06
FM178380_39(FM178380|pid:none) Aliivibrio salmonicida LFI1238 ch... 55 6e-06
CP001616_43(CP001616|pid:none) Tolumonas auensis DSM 9187, compl... 55 6e-06
CP000975_937(CP000975|pid:none) Methylacidiphilum infernorum V4,... 55 6e-06
CP000095_1444(CP000095|pid:none) Prochlorococcus marinus str. NA... 54 7e-06
CP000826_4618(CP000826|pid:none) Serratia proteamaculans 568, co... 54 7e-06
CP001359_3175(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 54 1e-05
CP000529_1092(CP000529|pid:none) Polaromonas naphthalenivorans C... 54 1e-05
CP001133_927(CP001133|pid:none) Vibrio fischeri MJ11 chromosome ... 54 1e-05
CP001131_3078(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 54 1e-05
CU914166_384(CU914166|pid:none) Ralstonia solanacearum strain IP... 54 1e-05
CU694393_76(CU694393|pid:none) Ralstonia solanacearum strain Mol... 54 1e-05
BX950851_4108(BX950851|pid:none) Erwinia carotovora subsp. atros... 54 1e-05
AE016827_2074(AE016827|pid:none) Mannheimia succiniciproducens M... 53 2e-05
CP000254_531(CP000254|pid:none) Methanospirillum hungatei JF-1, ... 53 2e-05
AL646053_236(AL646053|pid:none) Ralstonia solanacearum GMI1000 m... 53 2e-05
CP000901_3421(CP000901|pid:none) Yersinia pestis Angola, complet... 53 2e-05
CP001069_163(CP001069|pid:none) Ralstonia pickettii 12J chromoso... 53 2e-05
CP000251_292(CP000251|pid:none) Anaeromyxobacter dehalogenans 2C... 53 2e-05
DQ083509_1(DQ083509|pid:none) Thermus brockianus 4-alpha-glucano... 52 3e-05
CP000394_748(CP000394|pid:none) Granulibacter bethesdensis CGDNI... 52 3e-05
CP000442_22(CP000442|pid:none) Burkholderia ambifaria AMMD chrom... 52 4e-05
CP000790_127(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 chr... 52 4e-05
AP006725_4638(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 52 4e-05
AE017126_1114(AE017126|pid:none) Prochlorococcus marinus subsp. ... 52 4e-05
CP000304_2096(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 52 5e-05
CP000076_2839(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 52 5e-05
CP000058_2145(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 51 6e-05
CP000783_4192(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 51 6e-05
CP000613_2067(CP000613|pid:none) Rhodospirillum centenum SW, com... 51 8e-05
AC146748_12(AC146748|pid:none) Medicago truncatula clone mth2-65... 51 8e-05
CP000271_161(CP000271|pid:none) Burkholderia xenovorans LB400 ch... 51 8e-05
CP000644_697(CP000644|pid:none) Aeromonas salmonicida subsp. sal... 51 8e-05
(Q06801) RecName: Full=4-alpha-glucanotransferase, chloroplastic... 51 8e-05
AM236086_718(AM236086|pid:none) Rhizobium leguminosarum bv. vici... 50 1e-04
CP000462_3505(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 50 1e-04
AP008213_1674(AP008213|pid:none) Oryza sativa (japonica cultivar... 50 1e-04
AP004009_26(AP004009|pid:none) Oryza sativa Japonica Group genom... 50 1e-04
CP001103_1245(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 50 1e-04
BA000016_2338(BA000016|pid:none) Clostridium perfringens str. 13... 50 1e-04
CR378679_86(CR378679|pid:none) Photobacterium profundum SS9 chro... 50 1e-04
CP000686_1524(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 50 1e-04
AY459351_1(AY459351|pid:none) Thermus scotoductus 4-alpha-glucan... 50 1e-04
AE017221_893(AE017221|pid:none) Thermus thermophilus HB27, compl... 50 2e-04
(O87172) RecName: Full=4-alpha-glucanotransferase; EC=2... 50 2e-04
CP000561_754(CP000561|pid:none) Pyrobaculum calidifontis JCM 115... 50 2e-04
AM039952_454(AM039952|pid:none) Xanthomonas campestris pv. vesic... 49 3e-04
AP008229_63(AP008229|pid:none) Xanthomonas oryzae pv. oryzae MAF... 49 3e-04
CP000312_2247(CP000312|pid:none) Clostridium perfringens SM101, ... 49 3e-04
CP000967_113(CP000967|pid:none) Xanthomonas oryzae pv. oryzae PX... 49 3e-04
AE013598_113(AE013598|pid:none) Xanthomonas oryzae pv. oryzae KA... 49 3e-04
CP000246_2552(CP000246|pid:none) Clostridium perfringens ATCC 13... 49 3e-04
CU468135_3230(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 49 4e-04
AY596297_1739(AY596297|pid:none) Haloarcula marismortui ATCC 430... 49 4e-04
AE016853_3060(AE016853|pid:none) Pseudomonas syringae pv. tomato... 49 4e-04
AE008922_410(AE008922|pid:none) Xanthomonas campestris pv. campe... 48 5e-04
CP000378_1325(CP000378|pid:none) Burkholderia cenocepacia AU 105... 48 5e-04
BX640445_245(BX640445|pid:none) Bordetella bronchiseptica strain... 48 5e-04
CP001365_1487(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 48 5e-04
BX640431_316(BX640431|pid:none) Bordetella parapertussis strain ... 48 5e-04
BT061520_1(BT061520|pid:none) Zea mays full-length cDNA clone ZM... 48 5e-04
CP000960_68(CP000960|pid:none) Burkholderia cenocepacia MC0-3 ch... 48 5e-04
CP000267_2118(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 48 5e-04
CP001408_1561(CP001408|pid:none) Burkholderia pseudomallei MSHR3... 48 7e-04
CP000124_1712(CP000124|pid:none) Burkholderia pseudomallei 1710b... 48 7e-04
AE008923_427(AE008923|pid:none) Xanthomonas axonopodis pv. citri... 48 7e-04
CP000572_1548(CP000572|pid:none) Burkholderia pseudomallei 1106a... 48 7e-04
BX571965_2097(BX571965|pid:none) Burkholderia pseudomallei strai... 48 7e-04
CP000546_528(CP000546|pid:none) Burkholderia mallei NCTC 10229 c... 48 7e-04
CP000382_93(CP000382|pid:none) Clostridium novyi NT, complete ge... 48 7e-04
CP000111_1179(CP000111|pid:none) Prochlorococcus marinus str. MI... 47 0.001
CP000393_1096(CP000393|pid:none) Trichodesmium erythraeum IMS101... 47 0.001
CP000482_1709(CP000482|pid:none) Pelobacter propionicus DSM 2379... 47 0.001
CP000660_204(CP000660|pid:none) Pyrobaculum arsenaticum DSM 1351... 47 0.001
CP000116_2059(CP000116|pid:none) Thiobacillus denitrificans ATCC... 47 0.001
FM954973_181(FM954973|pid:none) Vibrio splendidus LGP32 chromoso... 47 0.002
CP000447_2149(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 47 0.002
CP000712_1767(CP000712|pid:none) Pseudomonas putida F1, complete... 46 0.003
CP000552_1170(CP000552|pid:none) Prochlorococcus marinus str. MI... 46 0.003
CP001056_912(CP001056|pid:none) Clostridium botulinum B str. Ekl... 45 0.003
CP001013_3874(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 45 0.003
CP001029_2792(CP001029|pid:none) Methylobacterium populi BJ001, ... 45 0.003
CP000282_984(CP000282|pid:none) Saccharophagus degradans 2-40, c... 45 0.003
AE004091_2165(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 45 0.003
CP000094_2545(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 45 0.003
CP000744_3107(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 45 0.003
FM209186_3163(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 45 0.003
CT573326_1886(CT573326|pid:none) Pseudomonas entomophila str. L4... 45 0.003
CP000908_2673(CP000908|pid:none) Methylobacterium extorquens PA1... 45 0.004
CP000360_1483(CP000360|pid:none) Acidobacteria bacterium Ellin34... 45 0.004
CP000301_3633(CP000301|pid:none) Rhodopseudomonas palustris BisB... 45 0.004
CP000138_262(CP000138|pid:none) Rhizobium etli CFN 42 plasmid p4... 45 0.004
CP001337_871(CP001337|pid:none) Chloroflexus aggregans DSM 9485,... 45 0.004
CP001280_207(CP001280|pid:none) Methylocella silvestris BL2, com... 45 0.004
AE015451_4008(AE015451|pid:none) Pseudomonas putida KT2440 compl... 45 0.006
CU459003_1875(CU459003|pid:none) Magnetospirillum gryphiswaldens... 45 0.006
CP001089_2018(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 44 0.010
CP000943_6466(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 44 0.010
AP008971_201(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 44 0.010
CP000661_1761(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17... 44 0.010
CP001078_843(CP001078|pid:none) Clostridium botulinum E3 str. Al... 44 0.013
CP001001_1568(CP001001|pid:none) Methylobacterium radiotolerans ... 44 0.013
DQ068047_1(DQ068047|pid:none) Aegilops tauschii disproportionati... 44 0.013
EF583985_11(EF583985|pid:none) Uncultured haloarchaeon clone fos... 43 0.017
CP000143_1043(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c... 43 0.017
CP000569_1218(CP000569|pid:none) Actinobacillus pleuropneumoniae... 43 0.017
CP001150_765(CP001150|pid:none) Rhodobacter sphaeroides KD131 ch... 43 0.017
CP000687_1202(CP000687|pid:none) Actinobacillus pleuropneumoniae... 43 0.017
CP000896_627(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 43 0.022
DQ068045_1(DQ068045|pid:none) Triticum aestivum disproportionati... 43 0.022
DQ068046_1(DQ068046|pid:none) Aegilops tauschii disproportionati... 43 0.022
CP001196_3017(CP001196|pid:none) Oligotropha carboxidovorans OM5... 43 0.022
AP009384_4117(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 42 0.029
AM260480_1542(AM260480|pid:none) Ralstonia eutropha H16 chromoso... 42 0.029
CP000252_2785(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 42 0.029
CP000148_2366(CP000148|pid:none) Geobacter metallireducens GS-15... 42 0.029
CP000283_3464(CP000283|pid:none) Rhodopseudomonas palustris BisB... 42 0.038
CT573071_819(CT573071|pid:none) Kuenenia stuttgartiensis genome ... 42 0.038
CP000926_3626(CP000926|pid:none) Pseudomonas putida GB-1, comple... 42 0.038
CP000482_3215(CP000482|pid:none) Pelobacter propionicus DSM 2379... 42 0.038
CP000681_1239(CP000681|pid:none) Shewanella putrefaciens CN-32, ... 42 0.038
AM946015_1117(AM946015|pid:none) Streptococcus uberis 0140J comp... 42 0.038
AM746676_2380(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 42 0.038
CP000490_1572(CP000490|pid:none) Paracoccus denitrificans PD1222... 42 0.050
CP000239_2315(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 42 0.050
AM501021_1(AM501021|pid:none) Medicago truncatula var. truncatul... 42 0.050
CP000446_2748(CP000446|pid:none) Shewanella sp. MR-4, complete g... 41 0.065
CP000230_1602(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 41 0.065
CP000103_1396(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 41 0.085
CP000753_1297(CP000753|pid:none) Shewanella baltica OS185, compl... 41 0.085
CP000085_933(CP000085|pid:none) Burkholderia thailandensis E264 ... 41 0.085
CP000825_1214(CP000825|pid:none) Prochlorococcus marinus str. MI... 41 0.085
CP000612_1437(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 41 0.085
CP000820_5198(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 41 0.085
CP001124_807(CP001124|pid:none) Geobacter bemidjiensis Bem, comp... 40 0.11
AP009256_1560(AP009256|pid:none) Bifidobacterium adolescentis AT... 40 0.11
BA000045_3316(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 40 0.11
CP000142_620(CP000142|pid:none) Pelobacter carbinolicus DSM 2380... 40 0.14
CP000478_3419(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 40 0.19
CP001321_219(CP001321|pid:none) Haemophilus parasuis SH0165, com... 40 0.19
CP000891_1349(CP000891|pid:none) Shewanella baltica OS195, compl... 40 0.19
CP001032_861(CP001032|pid:none) Opitutus terrae PB90-1, complete... 40 0.19
CP000249_1141(CP000249|pid:none) Frankia sp. CcI3, complete geno... 39 0.25
CR555306_3943(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 39 0.25
CP000114_1354(CP000114|pid:none) Streptococcus agalactiae A909, ... 39 0.32
CP000408_2132(CP000408|pid:none) Streptococcus suis 98HAH33, com... 39 0.32
AE009948_1400(AE009948|pid:none) Streptococcus agalactiae 2603V/... 39 0.32
CP000562_1052(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 39 0.32
CP000930_647(CP000930|pid:none) Heliobacterium modesticaldum Ice... 39 0.32
CP000407_2123(CP000407|pid:none) Streptococcus suis 05ZYH33, com... 39 0.32
(Q59266) RecName: Full=4-alpha-glucanotransferase; EC=2... 39 0.42
CP000554_972(CP000554|pid:none) Prochlorococcus marinus str. MIT... 39 0.42
CP000023_943(CP000023|pid:none) Streptococcus thermophilus LMG 1... 39 0.42
CP000419_832(CP000419|pid:none) Streptococcus thermophilus LMD-9... 39 0.42
CP001390_1868(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 38 0.55
CP001114_1873(CP001114|pid:none) Deinococcus deserti VCD115, com... 38 0.55
(P45176) RecName: Full=4-alpha-glucanotransferase; EC=2... 38 0.72
CP000319_1387(CP000319|pid:none) Nitrobacter hamburgensis X14, c... 38 0.72
CP000562_1258(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 38 0.72
CT971583_1549(CT971583|pid:none) Synechococcus WH7803 complete g... 37 0.93
CP000024_972(CP000024|pid:none) Streptococcus thermophilus CNRZ1... 37 0.93
FM204883_1363(FM204883|pid:none) Streptococcus equi subsp. equi ... 37 1.2
AK014605_1(AK014605|pid:none) Mus musculus 0 day neonate skin cD... 37 1.6
CP001095_132(CP001095|pid:none) Bifidobacterium longum subsp. in... 37 1.6
AE014295_1160(AE014295|pid:none) Bifidobacterium longum NCC2705,... 37 1.6
AM409314_7(AM409314|pid:none) Streptomyces glaucescens ORF1 (par... 36 2.1
CP001124_1002(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 36 2.1
CP000473_2862(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 36 2.1
CP001096_4095(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 36 2.1
AM743169_2607(AM743169|pid:none) Stenotrophomonas maltophilia K2... 36 2.7
CP001037_5309(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 36 2.7
CP001213_894(CP001213|pid:none) Bifidobacterium animalis subsp. ... 36 2.7
CP000472_1251(CP000472|pid:none) Shewanella piezotolerans WP3, c... 36 2.7
AJ278735_1(AJ278735|pid:none) Mus musculus mRNA for hypothetical... 35 3.6
CP000386_247(CP000386|pid:none) Rubrobacter xylanophilus DSM 994... 35 3.6
CU466930_993(CU466930|pid:none) Candidatus Cloacamonas acidamino... 35 3.6
CP000605_1691(CP000605|pid:none) Bifidobacterium longum DJO10A, ... 35 3.6
CP001095_2169(CP001095|pid:none) Bifidobacterium longum subsp. i... 35 3.6
CP000300_1452(CP000300|pid:none) Methanococcoides burtonii DSM 6... 35 4.6
CP000110_1581(CP000110|pid:none) Synechococcus sp. CC9605, compl... 35 4.6
AP009493_4257(AP009493|pid:none) Streptomyces griseus subsp. gri... 35 4.6
AH2289(AH2289) 4-alpha-glucanotransferase [imported] - Nostoc sp... 35 4.6
CP000262_1148(CP000262|pid:none) Streptococcus pyogenes MGAS1075... 35 6.1
AE014074_981(AE014074|pid:none) Streptococcus pyogenes MGAS315, ... 35 6.1
AE009949_1082(AE009949|pid:none) Streptococcus pyogenes MGAS8232... 35 6.1
CP000937_148(CP000937|pid:none) Francisella philomiragia subsp. ... 35 6.1
CP000686_3031(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 34 7.9
CP000097_1365(CP000097|pid:none) Synechococcus sp. CC9902, compl... 34 7.9
CP001601_1811(CP001601|pid:none) Corynebacterium aurimucosum ATC... 34 7.9
CP000003_1030(CP000003|pid:none) Streptococcus pyogenes MGAS1039... 34 7.9
>BT055804_1(BT055804|pid:none) Zea mays full-length cDNA clone
ZM_BFb0203N09 mRNA, complete cds.
Length = 444
Score = 281 bits (719), Expect = 3e-74
Identities = 134/293 (45%), Positives = 187/293 (63%), Gaps = 9/293 (3%)
Frame = +3
Query: 204 EYSSNCFNMKPEFATERLI--------EKNL-NEEDAMYKSGLFKLVQNVSLLADAEDEN 356
EY C+ K + TE+ I EK+L E++ + GLF L+QN+ L+ D ED
Sbjct: 127 EYQKQCYEFKEDCNTEKKIIVKIKTSAEKSLWVEKEDNIRRGLFDLLQNIVLIRDPEDST 186
Query: 357 RFYPRIEITKTSNFNELSDDIKTILHRLYISYYYERQEELWAQIALQRLPLIKGCTKMLV 536
+FYPR + TS+F +L + K IL RLY +YY+ RQE LW Q AL+ LP++ + ML
Sbjct: 187 KFYPRFNLEDTSSFRDLDEHSKNILRRLYYNYYFVRQENLWRQNALKTLPVLLNSSDMLA 246
Query: 537 CGEDLGMVPKCVEPVLNDLGILGLRIQRMPSDSNKDFYHPNEYSYLTVNTTSSHDMSTLR 716
CGEDLG++P CV PV+ +LG++GLRIQRMPS+ N +F P++YSY+TV S HD STLR
Sbjct: 247 CGEDLGLIPACVHPVMQELGLIGLRIQRMPSEPNLEFGIPSQYSYMTVCAPSCHDCSTLR 306
Query: 717 GWWEEDRARSQVFYNKILGMFGDAPYFCEPYVSEAVITQHLHSQSMISIFPIQDWFGISS 896
WWEED R FY ++G + P C P V ++ QH + SM +IFP+QD +
Sbjct: 307 AWWEEDEGRRSRFYKTVVGSDEEPPSRCTPEVVHFIVQQHFDAPSMWAIFPLQDLLALKD 366
Query: 897 EYGSRDPKEEKINEPSNPMHYWRYRMHINLETLVNDHDFSKNIQRLILSSNRN 1055
+Y +R EE IN+P+NP HYWR+R+H+ LE+L+ND D I+ L+ SS R+
Sbjct: 367 KYTTRPAPEETINDPTNPKHYWRFRVHVTLESLLNDKDIQATIKDLVTSSGRS 419
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,416,672,844
Number of extensions: 28090766
Number of successful extensions: 77138
Number of sequences better than 10.0: 262
Number of HSP's gapped: 77020
Number of HSP's successfully gapped: 262
Length of query: 366
Length of database: 1,040,966,779
Length adjustment: 130
Effective length of query: 236
Effective length of database: 624,409,729
Effective search space: 147360696044
Effective search space used: 147360696044
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
21 |
| VF (FL, S) |
0 |
| AH (FL, L) |
7 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
1 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |