| Contig-U01762-1 |
| Contig ID |
Contig-U01762-1 |
| Contig update |
2001. 8.29 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1268 |
| Chromosome number (1..6, M) |
3 |
| Chromosome length |
6358359 |
| Start point |
1359748 |
| End point |
1361019 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
2 |
| Number of EST |
4 |
| Link to clone list |
U01762 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6. 7 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 5. 6 |
| Homology vs DNA |
Query= Contig-U01762-1 (Contig-U01762-1Q) /CSM_Contig/Contig-U01762-1Q.Seq.d
(1278 letters)
Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(C84861) Dictyostelium discoideum slug cDNA, clone SSG853. 561 0.0 2
(AU038712) Dictyostelium discoideum slug cDNA, clone SSL382. 309 1e-79 1
(AU074618) Dictyostelium discoideum slug cDNA, clone SSL382. 188 2e-76 2
(AU073383) Dictyostelium discoideum slug cDNA, clone SSG853. 165 5e-71 2
(AM180355) Clostridium difficile 630 complete genome. 72 6e-08 1
(CP000246) Clostridium perfringens ATCC 13124, complete genome. 64 9e-06 17
(CP000312) Clostridium perfringens SM101, complete genome. 64 1e-05 1
(BA000016) Clostridium perfringens str. 13 DNA, complete gen... 64 1e-05 1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 36 0.002 16
(AC137802) Homo sapiens chromosome 16 clone RP11-698B13, WOR... 38 0.002 2
(AC087808) Homo sapiens chromosome 8, clone RP11-89A16, comp... 38 0.002 2
(AC104384) Homo sapiens chromosome 8, clone CTD-2381M20, com... 38 0.002 2
(AF273085) Homo sapiens chromosome 8 clone RP1-252K6 map 8q,... 38 0.003 2
(AL844507) Plasmodium falciparum chromosome 8. 42 0.003 17
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome. 36 0.003 14
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 32 0.007 15
(AP008934) Staphylococcus saprophyticus subsp. saprophyticus... 40 0.008 2
(AE014839) Plasmodium falciparum 3D7 chromosome 11 section 4... 36 0.013 11
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet... 54 0.014 1
(CP000716) Thermosipho melanesiensis BI429, complete genome. 54 0.014 1
(EK030696) 1092955404867 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.018 2
(AX926714) Sequence 4 from Patent WO03084989. 44 0.019 11
(AL034558) Plasmodium falciparum MAL3P2. 38 0.033 9
(AC141669) Apis mellifera clone CH224-54J11, *** SEQUENCING ... 38 0.039 5
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 36 0.046 14
(AM663187) Entamoeba moshkovskii FIC GSS, clone mosh132d09.p1k. 52 0.054 1
(AM651814) Entamoeba moshkovskii FIC GSS, clone mosh106e02.q1k. 52 0.054 1
(CP001186) Bacillus cereus G9842, complete genome. 52 0.054 1
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 52 0.054 1
(CP000233) Lactobacillus salivarius UCC118, complete genome. 52 0.054 1
(AC210382) Populus trichocarpa clone POP018-P22, complete se... 40 0.059 7
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2... 34 0.066 9
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 34 0.066 12
(AC109586) Homo sapiens chromosome 3 clone CTD-2008P21, comp... 46 0.069 8
(CP001057) Clostridium botulinum B str. Eklund 17B plasmid p... 34 0.086 8
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 34 0.11 21
(CP000013) Borrelia garinii PBi, complete genome. 48 0.12 18
(AL844509) Plasmodium falciparum chromosome 13. 36 0.13 16
(ER420956) 1092963704253 Global-Ocean-Sampling_GS-35-01-01-1... 34 0.17 3
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 34 0.19 11
(CP001158) Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisu... 34 0.20 15
(AL929351) Plasmodium falciparum strain 3D7, chromosome 5, s... 42 0.21 14
(ER543205) 1093016089054 Global-Ocean-Sampling_GS-35-01-01-1... 50 0.21 1
(EK164200) 1095458044581 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.21 1
(EK030985) 1092955407747 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.21 1
(EJ914143) 1093018552492 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.21 1
(EJ809480) 1093017480848 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.21 1
(CA117449) SCBFLR1039H09.g LR1 Saccharum officinarum cDNA cl... 50 0.21 1
(CP000853) Alkaliphilus oremlandii OhILAs, complete genome. 50 0.21 1
(CP000743) Methanococcus aeolicus Nankai-3, complete genome. 50 0.21 1
(CP000517) Lactobacillus helveticus DPC 4571, complete genome. 50 0.21 1
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi... 34 0.22 16
(AL844506) Plasmodium falciparum chromosome 7. 38 0.22 16
(BX000523) Zebrafish DNA sequence from clone CH211-161N23 in... 34 0.22 8
(AE014824) Plasmodium falciparum 3D7 chromosome 14 section 9... 34 0.26 13
(EJ313371) 1095403251411 Global-Ocean-Sampling_GS-27-01-01-1... 46 0.27 2
(EJ806382) 1093017461148 Global-Ocean-Sampling_GS-30-02-01-1... 44 0.28 2
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699... 36 0.29 21
(EJ115527) 1092343310251 Global-Ocean-Sampling_GS-27-01-01-1... 46 0.29 2
(FG297347) 1108793286051 New World Screwworm Larvae 9387 EST... 40 0.30 2
(AM481412) Vitis vinifera contig VV78X078011.1, whole genome... 38 0.31 2
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI... 32 0.32 13
(AC148237) Medicago truncatula chromosome 8 clone mth2-1o14,... 42 0.33 7
(AE017244) Mycoplasma hyopneumoniae 7448, complete genome. 34 0.53 16
(AC202215) Acyrthosiphon pisum BAC VMRC38-20-A10 (Benaroya ... 36 0.60 8
(EI340293) GM_WBc0083N08.r GM_WBc Glycine max genomic clone ... 38 0.61 2
(AY217738) Eimeria tenella apicoplast, complete genome. 36 0.62 5
(EJ378086) 1092963750533 Global-Ocean-Sampling_GS-28-01-01-1... 36 0.63 3
(AC147671) Pan troglodytes BAC clone CH251-52L13 from Y, com... 36 0.68 8
(DQ028409) Uncultured alpha proteobacterium phylotype IC-B-1... 38 0.74 3
(AL110477) Caenorhabditis elegans YAC Y113G7B. 40 0.79 8
(CR931759) Zebrafish DNA sequence from clone DKEYP-39E9 in l... 38 0.82 4
(EI837538) POTGK47TR Solanum tuberosum RHPOTKEY BAC ends Sol... 44 0.84 2
(AC136451) Medicago truncatula clone mth2-17d19, complete se... 48 0.84 1
(AC009992) Arabidopsis thaliana chromosome III BAC T4P3 geno... 48 0.84 1
(DD000814) PLANT ARTIFICIAL CHROMOSOME COMPOSITIONS AND METH... 48 0.84 1
(AX059499) Sequence 232 from Patent WO0055325. 48 0.84 1
(AR777048) Sequence 203 from patent US 6972197. 48 0.84 1
(CU694913) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.84 1
(AC232810) Solanum tuberosum chromosome 6 clone RHPOTKEY122N... 48 0.84 1
(AC223453) Bos taurus clone CH240-469E5, WORKING DRAFT SEQUE... 48 0.84 1
(AC223161) Bos taurus clone CH240-427M16, WORKING DRAFT SEQU... 48 0.84 1
(AC170119) Bos taurus clone CH240-237B16, WORKING DRAFT SEQU... 48 0.84 1
(EJ016848) 1095439018197 Global-Ocean-Sampling_GS-26-01-01-1... 48 0.84 1
(CG949752) MBEBO08TR mth2 Medicago truncatula genomic clone ... 48 0.84 1
(EE759027) 020829OD10L015078HT OD10L Ovis aries cDNA, mRNA s... 48 0.84 1
(DR026629) Osmo01182 F. cylindrus osmotic stress library Fra... 48 0.84 1
(DN539814) 1385637 MARC 7BOV Bos taurus cDNA 3', mRNA sequence. 48 0.84 1
(DN538395) 1384101 MARC 7BOV Bos taurus cDNA 5', mRNA sequence. 48 0.84 1
(DN277165) 1156395 MARC 7BOV Bos taurus cDNA 5', mRNA sequence. 48 0.84 1
(CX952880) UMC-bemiv_0B01-021-d03 2-cell in vitro produced e... 48 0.84 1
(AM022132) Bos sp. 5' EST, clone C0007399g16. 48 0.84 1
(CK846711) 969243 MARC 4BOV Bos taurus cDNA 3', mRNA sequence. 48 0.84 1
(CF117923) fs1000.z1 fs 103-105d fetal sheep skin library Ov... 48 0.84 1
(BM251342) BOTL0100004XH12R Normalized Bovine Total Leukocyt... 48 0.84 1
(BF600359) 265113 MARC 3BOV Bos taurus cDNA 5', mRNA sequence. 48 0.84 1
(BE666149) 149202 MARC 4BOV Bos taurus cDNA 5', mRNA sequence. 48 0.84 1
(AE014834) Plasmodium falciparum 3D7 chromosome 10 section 6... 32 0.85 11
(FI310342) AdH1160-CPY2-M21TF AdH1 Arachis duranensis genomi... 44 0.93 2
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 34 0.98 14
(BX548174) Prochlorococcus marinus MED4 complete genome. 34 1.1 22
(EJ431565) 1093015259852 Global-Ocean-Sampling_GS-28-01-01-1... 42 1.2 2
(CP000084) Candidatus Pelagibacter ubique HTCC1062, complete... 34 1.2 18
(CP000883) Hemiselmis andersenii chromosome 3, complete sequ... 32 1.2 12
(AC016193) Homo sapiens clone RP11-24B5, WORKING DRAFT SEQUE... 36 1.5 9
(AX344609) Sequence 34 from Patent WO0200927. 34 1.5 6
(CP000993) Borrelia recurrentis A1, complete genome. 32 1.5 20
(CP000976) Borrelia duttonii Ly, complete genome. 32 1.5 20
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 40 1.5 14
(AX344573) Sequence 24 from Patent WO0200932. 34 1.6 13
(DQ889678) Bacillus cereus strain AH818 plasmid pPER272, com... 42 1.8 7
(DQ889677) Bacillus cereus strain AH820 plasmid pPER272, com... 42 1.8 7
(CP001285) Bacillus cereus AH820 plasmid pAH820_272, complet... 42 1.8 7
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s... 34 1.8 10
(BD460281) Diagnosis of Diseases Associated with Cell Cycle. 34 1.9 4
(BD452203) Diagnosis of Diseases Associated with Cell Cycle. 34 1.9 4
(AX348604) Sequence 62 from Patent WO0202807. 34 1.9 4
(AX344201) Sequence 48 from Patent WO0200926. 34 1.9 4
(AX251817) Sequence 78 from Patent WO0168911. 34 1.9 4
(AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1... 44 1.9 10
(AC022534) Homo sapiens chromosome 10 clone RP11-316G7, comp... 44 2.0 5
(CR456632) Zebrafish DNA sequence from clone CH211-86M22 in ... 38 2.0 7
(AM471316) Vitis vinifera, whole genome shotgun sequence, co... 32 2.1 7
(EU912438) Vaucheria litorea chloroplast, complete genome. 34 2.1 10
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 32 2.2 20
(EK164762) 1095458046780 Global-Ocean-Sampling_GS-31-01-01-1... 34 2.2 2
(AC027489) Homo sapiens chromosome , clone RP11-453M23, comp... 36 2.2 9
(BX936436) Zebrafish DNA sequence from clone DKEY-16H19 in l... 36 2.3 8
(AC148938) Pan troglodytes BAC clone CH251-272M11 from chrom... 36 2.3 9
(CU525306) H.melpomene DNA sequence from clone AEHM-13H8. 34 2.4 8
(BX296546) Zebrafish DNA sequence from clone CH211-234P1 in ... 42 2.5 4
(BD061520) Genome DNA of symbiotic bacteria of aphid. 34 2.5 14
(AR409405) Sequence 1 from patent US 6632935. 34 2.5 14
(BA000003) Buchnera aphidicola str. APS (Acyrthosiphon pisum... 34 2.5 14
(BM358116) GA__Ea0005G06r Gossypium arboreum 7-10 dpa fiber ... 36 2.5 3
(CP001161) Buchnera aphidicola str. 5A (Acyrthosiphon pisum)... 34 2.5 14
(AC005505) Plasmodium falciparum chromosome 12 clone PFYAC18... 32 2.6 11
(AZ648228) 1M0517H07F Mouse 10kb plasmid UUGC1M library Mus ... 38 2.7 2
(ER465594) 1092963920524 Global-Ocean-Sampling_GS-35-01-01-1... 36 2.8 2
(AE000794) Borrelia burgdorferi B31 plasmid lp28-1, complete... 32 2.8 5
(AC147666) Pan troglodytes BAC clone CH251-196O7 from Y, com... 36 3.0 7
(AC149110) Papio anubis clone RP41-242L7, WORKING DRAFT SEQU... 36 3.0 7
(AX511499) Sequence 22 from Patent WO0246465. 34 3.0 3
(AF116653) Homo sapiens PRO0823 mRNA, complete cds. 34 3.0 3
(AC147687) Pan troglodytes BAC clone CH251-95K2 from Y, comp... 36 3.0 8
(AC212618) Solanum lycopersicum chromosome 7 clone C07HBa004... 38 3.1 5
(AC170127) Bos taurus clone CH240-242A21, WORKING DRAFT SEQU... 36 3.2 8
(AC006281) Plasmodium falciparum chromosome 12 clone PFYACB8... 34 3.3 11
(BC094696) Homo sapiens zinc finger, CW type with PWWP domai... 46 3.3 1
(BC065764) Homo sapiens zinc finger, CW type with PWWP domai... 46 3.3 1
(AC093142) Homo sapiens chromosome 3 clone RP11-301D8, compl... 46 3.3 1
(AC067902) Homo sapiens chromosome 11, clone RP11-72C9, comp... 46 3.3 1
(AC106662) Rattus norvegicus clone CH230-74A13, *** SEQUENCI... 46 3.3 1
(AC106661) Rattus norvegicus clone CH230-74C23, *** SEQUENCI... 46 3.3 1
(AC104403) Rattus norvegicus clone CH230-136I16, *** SEQUENC... 46 3.3 1
(CU466970) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.3 1
(ER493767) 1093015338995 Global-Ocean-Sampling_GS-35-01-01-1... 46 3.3 1
(ER452076) 1092963853572 Global-Ocean-Sampling_GS-35-01-01-1... 46 3.3 1
(EK480258) 1095469513006 Global-Ocean-Sampling_GS-32-01-01-1... 46 3.3 1
(EK474741) 1095469475832 Global-Ocean-Sampling_GS-32-01-01-1... 46 3.3 1
(EK291941) 1095462333432 Global-Ocean-Sampling_GS-31-01-01-1... 46 3.3 1
(EK127302) 1092990501305 Global-Ocean-Sampling_GS-31-01-01-1... 46 3.3 1
(EJ883899) 1093018407983 Global-Ocean-Sampling_GS-30-02-01-1... 46 3.3 1
(EJ452588) 1093015441428 Global-Ocean-Sampling_GS-28-01-01-1... 46 3.3 1
(EJ449033) 1093015396917 Global-Ocean-Sampling_GS-28-01-01-1... 46 3.3 1
(EJ275964) 1095366020486 Global-Ocean-Sampling_GS-27-01-01-1... 46 3.3 1
(EJ240448) 1095328038407 Global-Ocean-Sampling_GS-27-01-01-1... 46 3.3 1
(EJ062347) 1095458004946 Global-Ocean-Sampling_GS-26-01-01-1... 46 3.3 1
(ED080773) AUAC-aai90c11.g1 Ascaris suum whole genome shotgu... 46 3.3 1
(ED056618) AUAC-aab96d06.b1 Ascaris suum whole genome shotgu... 46 3.3 1
(CZ292392) cp81b04.r Candida parapsilosis Random Genomic Lib... 46 3.3 1
(CT255534) Sus scrofa genomic clone PigE-204I23, genomic sur... 46 3.3 1
(BX214093) Danio rerio genomic clone DKEY-263O20, genomic su... 46 3.3 1
(CK822989) ij21c08.x5 Melton Normalized Human Islet 4 N4-HIS... 46 3.3 1
(BQ102408) ij21c08.x1 Melton Normalized Human Islet 4 N4-HIS... 46 3.3 1
(BI037904) CM4-NT0290-150101-681-f07 NT0290 Homo sapiens cDN... 46 3.3 1
(BG224836) kp51b08.y1 TBN95TM-SSFH Strongyloides stercoralis... 46 3.3 1
(BG199790) RST19084 Athersys RAGE Library Homo sapiens cDNA,... 46 3.3 1
(BG197719) RST16948 Athersys RAGE Library Homo sapiens cDNA,... 46 3.3 1
(BG183206) RST2080 Athersys RAGE Library Homo sapiens cDNA, ... 46 3.3 1
(GE512691) CCFT860.b1_G23.ab1 CCF(STU) sunflower Helianthus ... 46 3.3 1
(AW649619) EST328073 tomato germinating seedlings, TAMU Sola... 46 3.3 1
(AW393564) PM0-ST0308-161299-001-C11 ST0308 Homo sapiens cDN... 46 3.3 1
(EW767120) ST020032B20G06 Normalized and subtracted western ... 46 3.3 1
(DQ489736) Leuconostoc citreum KM20, complete genome. 46 3.3 1
(AC100460) Mus musculus clone RP23-138P7, LOW-PASS SEQUENCE ... 40 3.5 2
(EJ715960) 1092959418761 Global-Ocean-Sampling_GS-30-02-01-1... 38 3.5 2
(EJ654120) 1092954011361 Global-Ocean-Sampling_GS-30-02-01-1... 38 3.6 2
(BS000547) Pan troglodytes chromosome Y clone:PTB-232N08, co... 36 3.6 8
(ET971612) CHO_OF653xc19f1.ab1 CHO_OF Nicotiana tabacum geno... 40 3.6 2
(AM483265) Vitis vinifera contig VV78X184666.11, whole genom... 42 3.6 3
(ET971673) CHO_OF653xc19r1.ab1 CHO_OF Nicotiana tabacum geno... 40 3.7 2
(AL445383) Human chromosome 14 DNA sequence BAC R-88E18 of l... 34 3.7 9
(AF538053) Monosiga brevicollis mitochondrion, complete genome. 38 3.8 7
(BX465854) Zebrafish DNA sequence from clone DKEY-208M10 in ... 36 3.9 10
(EJ083196) 1095460068308 Global-Ocean-Sampling_GS-26-01-01-1... 44 4.0 2
(EK326897) 1095467009531 Global-Ocean-Sampling_GS-31-01-01-1... 36 4.0 2
(AU071281) Dictyostelium discoideum slug cDNA, clone SSB113. 36 4.0 2
(AC069520) Homo sapiens chromosome 3 clone RP11-269A14, WORK... 36 4.0 9
(DD010736) Diagnosis of known genetic Parameters within the ... 40 4.1 12
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)... 34 4.1 16
(AC005308) Plasmodium falciparum chromosome 12 clone PFYAC49... 34 4.4 9
(AY102622) Campylobacter jejuni subsp. jejuni 81-176 putativ... 42 4.7 4
(AC116952) Mus musculus BAC clone RP23-104A7 from 14, comple... 34 4.7 11
(DL173642) Methods for Identifying the Target of a Compound ... 32 4.8 4
(AX489202) Sequence 6502 from Patent WO02053728. 32 4.8 4
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 34 4.9 10
(AY521251) Aleurodicus dugesii mitochondrion, complete genome. 32 5.0 5
(EL506572) B05_PF-SAU3A-T3-M-P2.AB1 Blood stage Plasmodium f... 42 5.0 2
(ER630679) 1093018429516 Global-Ocean-Sampling_GS-36-01-01-2... 36 5.0 3
(AE017332) Mycoplasma hyopneumoniae 232, complete genome. 32 5.1 19
(AF359057) Leishmania braziliensis strain M 2903 kinetoplast... 44 5.1 2
(DX531192) GH_MBb0035N18r GH_MBb Gossypium hirsutum genomic ... 34 5.2 3
(CP000768) Campylobacter jejuni subsp. doylei 269.97, comple... 32 5.3 2
(AF008210) Buchnera aphidicola genomic fragment containing (... 36 5.5 4
(AJ011856) Saccharomyces cerevisiae complete mitochondrial g... 36 5.5 6
(AY380826) Lymphocystis disease virus - isolate China, compl... 32 5.7 9
(DU169305) DN__Ba0029A04.r DN__Ba Drosophila novamexicana ge... 28 5.7 4
(AC175852) Strongylocentrotus purpuratus clone R3-15K15, WOR... 42 5.7 8
(AE014826) Plasmodium falciparum 3D7 chromosome 14 section 1... 38 5.7 12
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 32 5.7 12
(AX344574) Sequence 25 from Patent WO0200932. 38 5.8 10
(AC112983) Mus musculus clone RP24-530P15, WORKING DRAFT SEQ... 34 6.0 2
(AC189003) Pan troglodytes BAC clone CH251-683D15 from chrom... 32 6.1 2
(AC183963) Pan troglodytes BAC clone CH251-562F21 from chrom... 32 6.1 2
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 32 6.2 9
(AC182678) Populus trichocarpa clone Pop1-29M15, complete se... 32 6.2 2
(AL929132) Mouse DNA sequence from clone RP23-346G8 on chrom... 34 6.3 2
(BQ596431) PfESToab33f12.y1 Plasmodium falciparum 3D7 asexua... 42 6.4 2
(DR389422) USDA-FP_149242 Adult Alate Aphis gossypii (WHAGA)... 40 6.4 2
(AL353811) Human DNA sequence from clone RP11-482I10 on chro... 32 6.5 9
(AC149097) Pan troglodytes BAC clone CH251-8I14 from Y, comp... 36 6.5 7
(AR547716) Sequence 2847 from patent US 6747137. 40 6.5 2
(BX321909) Mouse DNA sequence from clone RP23-443D3 on chrom... 34 6.5 2
(U23947) Mycoplasma pulmonis variable surface antigen locus,... 32 6.6 6
(AC231880) Oryza minuta clone OM__Ba0192O05, *** SEQUENCING ... 38 6.6 5
(DR395573) USDA-FP_155508 Adult Alate Aphis gossypii (WHAGA)... 40 6.9 2
(AP003567) Oryza sativa Japonica Group genomic DNA, chromoso... 42 7.0 3
(AC224018) Bos taurus clone CH240-451N9, WORKING DRAFT SEQUE... 36 7.0 5
(CU928260) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 7.1 6
(EL505048) F01_1504_1.AB1 Blood stage Plasmodium falciparum ... 42 7.1 2
(L06178) Apis mellifera ligustica complete mitochondrial gen... 32 7.3 6
(AC161610) Mus musculus chromosome 14 clone RP23-102D6, WORK... 34 7.4 11
(CP001273) Borrelia burgdorferi 156a plasmid 156a_lp28-1, co... 34 7.4 4
(AX417049) Sequence 4040 from Patent WO0228891. 34 7.5 10
(AK141373) Mus musculus 7 days embryo whole body cDNA, RIKEN... 34 7.7 2
(AC017866) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 38 7.9 2
(ED339976) AUAC-aap27d07.g1 Ascaris suum whole genome shotgu... 36 8.1 3
(AL583853) Human DNA sequence from clone RP11-139I17 on chro... 36 8.1 6
(AC230141) Bos taurus clone CH240-519K19, WORKING DRAFT SEQU... 34 8.2 10
(AC174509) Strongylocentrotus purpuratus clone R3-1036D2, WO... 40 8.2 4
(Z93341) Human DNA sequence from clone RP1-101A4 on chromoso... 38 8.3 4
(CG824688) SOYDH14TV LargeInsertSoybeanGenLib Glycine max ge... 34 8.3 2
(EJ737370) 1092961206680 Global-Ocean-Sampling_GS-30-02-01-1... 32 8.3 3
(AC026473) Homo sapiens chromosome 16 clone RP11-51O6, compl... 38 8.3 6
(EG653464) AGENCOURT_90946338 NICHD_XGC_tropInt_60 Xenopus (... 32 8.4 2
(EI335521) GM_WBc0077C19.f GM_WBc Glycine max genomic clone ... 34 8.4 2
(EK271378) 1095462259187 Global-Ocean-Sampling_GS-31-01-01-1... 32 8.4 2
(DT608969) ACAG-aab23e02.g1 Hydra_EST_UCI-9 Hydra magnipapil... 32 8.4 2
(DX419279) MUGQ_CH252P034C12Sp6_AV777_046 CHORI-252 Vervet M... 32 8.4 2
(BQ601120) MI-P-H1-afm-d-07-1-UM.s1 MI-P-H1 Sus scrofa cDNA ... 32 8.5 2
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 34 8.5 19
(AQ462035) HS_5094_B2_E12_T7A RPCI-11 Human Male BAC Library... 34 8.5 2
(AF352790) Chrysomya putoria mitochondrion, complete genome. 38 8.6 4
(BB797915) Mus musculus 0 day neonate cortex cDNA, RIKEN ful... 34 8.7 2
(AM285305) Spiroplasma citri GII3-3X chromosome, contig Cont... 32 8.8 11
(AC230190) Bos taurus clone CH240-518K21, WORKING DRAFT SEQU... 38 8.8 8
(AC170426) Bos taurus clone CH240-249O24, WORKING DRAFT SEQU... 34 8.9 6
(AC230046) Homo sapiens FOSMID clone ABC12-49055600P9 from c... 40 8.9 5
(EF650525) Pleuretra lineata isolate Pl.line.UK.1 cytochrome... 34 9.0 3
(AJ487376) Solanum tuberosum GSS, clone GP81. 42 9.1 2
(AL035476) Plasmodium falciparum MAL4P3. 32 9.1 15
(AE017243) Mycoplasma hyopneumoniae J, complete genome. 34 9.2 17
(DR390641) USDA-FP_150573 Adult Alate Aphis gossypii (WHAGA)... 40 9.3 2
(AC116925) Dictyostelium discoideum chromosome 2 map 4189423... 42 9.4 5
(DD061484) Methods and nucleic acids for the analysis of he... 34 9.5 3
(AX599046) Sequence 386 from Patent WO02077272. 34 9.5 3
(EK203851) 1095460066487 Global-Ocean-Sampling_GS-31-01-01-1... 34 9.5 3
(AC231998) Solanum tuberosum chromosome 1 clone RH017J12, **... 36 9.5 6
(AP010043) Lotus japonicus genomic DNA, chromosome 1, clone:... 40 9.6 5
(EJ754078) 1092963060706 Global-Ocean-Sampling_GS-30-02-01-1... 32 9.6 3
(AE014838) Plasmodium falciparum 3D7 chromosome 11 section 3... 30 9.6 14
(EK172450) 1095458081762 Global-Ocean-Sampling_GS-31-01-01-1... 32 9.7 3
(ED657371) GM_WBa0077I10.r GM_WBa Glycine max genomic clone ... 38 9.9 2
(AX344559) Sequence 10 from Patent WO0200932. 34 9.9 12
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1... 32 10.0 13
>(C84861) Dictyostelium discoideum slug cDNA, clone SSG853.
Length = 627
Score = 561 bits (283), Expect(2) = 0.0
Identities = 283/283 (100%)
Strand = Plus / Plus
Query: 904 gtttagatttaaaagaatgtgtatatatagattttggtaatcaattaccaaatgaattta 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtttagatttaaaagaatgtgtatatatagattttggtaatcaattaccaaatgaattta 324
Query: 964 aaaatcaatgtttagcatatagagatttatcagagaataaaaatattttagaagcagcta 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaatcaatgtttagcatatagagatttatcagagaataaaaatattttagaagcagcta 384
Query: 1024 atcaattatttgcagttttaagatggagtgaaaatcaagaaggtgctaaaatcattttat 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atcaattatttgcagttttaagatggagtgaaaatcaagaaggtgctaaaatcattttat 444
Query: 1084 taccagatctcagaaaagaaccatttaaaagtttagataattctgaagctgtttttgata 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taccagatctcagaaaagaaccatttaaaagtttagataattctgaagctgtttttgata 504
Query: 1144 gaatttttagagctgcaagtggaaaacaggcaaatttatcaac 1186
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaatttttagagctgcaagtggaaaacaggcaaatttatcaac 547
Score = 404 bits (204), Expect(2) = 0.0
Identities = 204/204 (100%)
Strand = Plus / Plus
Query: 640 tagtatcagattcagaattagttattttaagaagaggtggtgtttcagagaaatcattaa 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagtatcagattcagaattagttattttaagaagaggtggtgtttcagagaaatcattaa 60
Query: 700 aatgcgttataaataataaatttaaagatacaattcaaattacatcgattaataaaactg 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgcgttataaataataaatttaaagatacaattcaaattacatcgattaataaaactg 120
Query: 760 ttgaaaatacaactagtcaaggtcaagaagcacctggtcaattattgactcattatgctc 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgaaaatacaactagtcaaggtcaagaagcacctggtcaattattgactcattatgctc 180
Query: 820 ctgatattcaaacttttattttag 843
||||||||||||||||||||||||
Sbjct: 181 ctgatattcaaacttttattttag 204
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,600,971,382
Number of extensions: 112622387
Number of successful extensions: 10326050
Number of sequences better than 10.0: 289
Length of query: 1278
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1254
Effective length of database: 99,340,224,878
Effective search space: 124572641997012
Effective search space used: 124572641997012
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.18 |
| Homology vs Protein |
Query= Contig-U01762-1 (Contig-U01762-1Q) /CSM_Contig/Contig-U01762-1Q.Seq.d
(1278 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CP000853_2536(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 97 1e-18
CP001083_140(CP001083|pid:none) Clostridium botulinum Ba4 str. 6... 96 2e-18
CP000939_143(CP000939|pid:none) Clostridium botulinum B1 str. Ok... 96 4e-18
CP000728_136(CP000728|pid:none) Clostridium botulinum F str. Lan... 96 4e-18
CP000246_2403(CP000246|pid:none) Clostridium perfringens ATCC 13... 95 6e-18
CP000312_2123(CP000312|pid:none) Clostridium perfringens SM101, ... 95 6e-18
CP000804_4077(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 93 2e-17
CP000382_2038(CP000382|pid:none) Clostridium novyi NT, complete ... 92 3e-17
AE015927_232(AE015927|pid:none) Clostridium tetani E88, complete... 92 3e-17
CP000568_2553(CP000568|pid:none) Clostridium thermocellum ATCC 2... 92 5e-17
AP009389_2828(AP009389|pid:none) Pelotomaculum thermopropionicum... 90 2e-16
CP000923_94(CP000923|pid:none) Thermoanaerobacter sp. X514, comp... 90 2e-16
CP000924_2057(CP000924|pid:none) Thermoanaerobacter pseudethanol... 90 2e-16
CP001056_433(CP001056|pid:none) Clostridium botulinum B str. Ekl... 90 2e-16
CP000885_3703(CP000885|pid:none) Clostridium phytofermentans ISD... 89 4e-16
CP001251_747(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, ... 89 4e-16
CP000721_404(CP000721|pid:none) Clostridium beijerinckii NCIMB 8... 89 4e-16
BA000023_1656(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 88 8e-16
AP009153_3590(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 87 2e-15
CP001348_256(CP001348|pid:none) Clostridium cellulolyticum H10, ... 86 2e-15
CP000679_1455(CP000679|pid:none) Caldicellulosiruptor saccharoly... 85 5e-15
A99214(A99214) sUA5 related conserved hypothetical protein SSO06... 85 5e-15
CP001398_1941(CP001398|pid:none) Thermococcus gammatolerans EJ3,... 85 5e-15
CP000473_1559(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 84 8e-15
CP000850_20(CP000850|pid:none) Salinispora arenicola CNS-205, co... 84 1e-14
CP000686_4216(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 84 1e-14
CP001104_1884(CP001104|pid:none) Eubacterium eligens ATCC 27750,... 84 1e-14
CP000360_4087(CP000360|pid:none) Acidobacteria bacterium Ellin34... 83 2e-14
CP001399_1432(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 82 4e-14
AE001437_2838(AE001437|pid:none) Clostridium acetobutylicum ATCC... 82 4e-14
CP001336_4756(CP001336|pid:none) Desulfitobacterium hafniense DC... 82 5e-14
CP000612_3116(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 82 5e-14
CP001107_107(CP001107|pid:none) Eubacterium rectale ATCC 33656, ... 81 9e-14
CP001393_1010(CP001393|pid:none) Anaerocellum thermophilum DSM 6... 81 9e-14
CP001068_485(CP001068|pid:none) Ralstonia pickettii 12J chromoso... 81 9e-14
AP008971_1082(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA... 80 2e-13
AE010299_4439(AE010299|pid:none) Methanosarcina acetivorans str.... 80 2e-13
BA000001_456(BA000001|pid:none) Pyrococcus horikoshii OT3 DNA, c... 80 2e-13
CP000157_2620(CP000157|pid:none) Erythrobacter litoralis HTCC259... 79 3e-13
AM260479_569(AM260479|pid:none) Ralstonia eutropha H16 chromosom... 79 3e-13
AM502246_215(AM502246|pid:none) Leishmania infantum chromosome 28. 79 4e-13
CP000774_774(CP000774|pid:none) Parvibaculum lavamentivorans DS-... 79 4e-13
CP000860_2069(CP000860|pid:none) Candidatus Desulforudis audaxvi... 79 4e-13
CP001638_3017(CP001638|pid:none) Geobacillus sp. WCH70, complete... 79 5e-13
AE005673_3364(AE005673|pid:none) Caulobacter crescentus CB15, co... 79 5e-13
CP000922_2688(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 78 6e-13
CP000724_323(CP000724|pid:none) Alkaliphilus metalliredigens QYM... 78 6e-13
CP001032_1590(CP001032|pid:none) Opitutus terrae PB90-1, complet... 78 6e-13
CP001034_2810(CP001034|pid:none) Natranaerobius thermophilus JW/... 78 6e-13
AL646052_577(AL646052|pid:none) Ralstonia solanacearum GMI1000 c... 78 8e-13
AE009441_2090(AE009441|pid:none) Pyrobaculum aerophilum str. IM2... 78 8e-13
CT005266_213(CT005266|pid:none) Leishmania major strain Friedlin... 78 8e-13
CP001472_2842(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 77 1e-12
AE016877_5078(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 77 1e-12
AP006840_75(AP006840|pid:none) Symbiobacterium thermophilum IAM ... 77 1e-12
CP001098_1781(CP001098|pid:none) Halothermothrix orenii H 168, c... 77 1e-12
CP000577_2381(CP000577|pid:none) Rhodobacter sphaeroides ATCC 17... 77 1e-12
CU861906_589(CU861906|pid:none) Ralstonia solanacearum strain Mo... 77 1e-12
CP000505_1798(CP000505|pid:none) Thermofilum pendens Hrk 5, comp... 77 2e-12
CP000316_4541(CP000316|pid:none) Polaromonas sp. JS666, complete... 77 2e-12
CP001099_470(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 77 2e-12
AE016825_3218(AE016825|pid:none) Chromobacterium violaceum ATCC ... 77 2e-12
CP000485_4582(CP000485|pid:none) Bacillus thuringiensis str. Al ... 76 2e-12
CP000781_3235(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 76 3e-12
CP000812_1367(CP000812|pid:none) Thermotoga lettingae TMO, compl... 76 3e-12
BA000011_1321(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA... 76 3e-12
CP001635_5030(CP001635|pid:none) Variovorax paradoxus S110 chrom... 75 4e-12
CP001140_39(CP001140|pid:none) Desulfurococcus kamchatkensis 122... 75 5e-12
CP000090_553(CP000090|pid:none) Ralstonia eutropha JMP134 chromo... 75 5e-12
BX571965_811(BX571965|pid:none) Burkholderia pseudomallei strain... 75 7e-12
CU234118_1942(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 74 9e-12
AP006627_3858(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 74 9e-12
CP001096_1244(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 74 9e-12
AE017333_3763(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 74 9e-12
CP000414_1697(CP000414|pid:none) Leuconostoc mesenteroides subsp... 74 1e-11
CP000422_1258(CP000422|pid:none) Pediococcus pentosaceus ATCC 25... 74 1e-11
CP001029_4488(CP001029|pid:none) Methylobacterium populi BJ001, ... 73 2e-11
CP000240_1005(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-1... 73 2e-11
CP000411_1427(CP000411|pid:none) Oenococcus oeni PSU-1, complete... 73 2e-11
CP001281_3015(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 73 2e-11
CP001510_4153(CP001510|pid:none) Methylobacterium extorquens AM1... 73 3e-11
CP000031_287(CP000031|pid:none) Ruegeria pomeroyi DSS-3, complet... 73 3e-11
CP001298_4279(CP001298|pid:none) Methylobacterium chloromethanic... 73 3e-11
AE016830_2379(AE016830|pid:none) Enterococcus faecalis V583, com... 73 3e-11
AM167904_892(AM167904|pid:none) Bordetella avium 197N complete g... 73 3e-11
AP007281_444(AP007281|pid:none) Lactobacillus reuteri JCM 1112 D... 73 3e-11
CP000975_159(CP000975|pid:none) Methylacidiphilum infernorum V4,... 73 3e-11
AG1767(AG1767) yeast translation initiation protein homolog lin2... 73 3e-11
CP000557_3272(CP000557|pid:none) Geobacillus thermodenitrificans... 72 3e-11
CP001108_442(CP001108|pid:none) Prosthecochloris aestuarii DSM 2... 72 3e-11
AE1392(AE1392) yeast translation initiation protein homolog lmo2... 72 3e-11
CP000771_692(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 72 3e-11
CP000394_2200(CP000394|pid:none) Granulibacter bethesdensis CGDN... 72 3e-11
CP000099_881(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 72 3e-11
AE000782_769(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304,... 72 4e-11
CP000463_4343(CP000463|pid:none) Rhodopseudomonas palustris BisA... 72 4e-11
CR954253_684(CR954253|pid:none) Lactobacillus delbrueckii subsp.... 72 4e-11
CP000412_565(CP000412|pid:none) Lactobacillus delbrueckii subsp.... 72 4e-11
CP001175_52(CP001175|pid:none) Listeria monocytogenes HCC23, com... 72 4e-11
CP000301_4249(CP000301|pid:none) Rhodopseudomonas palustris BisB... 72 4e-11
CP001132_1342(CP001132|pid:none) Acidithiobacillus ferrooxidans ... 72 6e-11
CP000053_1345(CP000053|pid:none) Rickettsia felis URRWXCal2, com... 72 6e-11
CP001022_2657(CP001022|pid:none) Exiguobacterium sibiricum 255-1... 71 7e-11
CP001016_1986(CP001016|pid:none) Beijerinckia indica subsp. indi... 71 7e-11
CP001110_466(CP001110|pid:none) Pelodictyon phaeoclathratiforme ... 71 7e-11
AE014188_35(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 71 7e-11
AM902716_3605(AM902716|pid:none) Bordetella petrii strain DSM 12... 71 7e-11
BA000043_3375(BA000043|pid:none) Geobacillus kaustophilus HTA426... 71 7e-11
FM177140_1328(FM177140|pid:none) Lactobacillus casei BL23 comple... 71 1e-10
CP000555_297(CP000555|pid:none) Methylibium petroleiphilum PM1, ... 71 1e-10
CP000969_75(CP000969|pid:none) Thermotoga sp. RQ2, complete geno... 71 1e-10
AM263198_2490(AM263198|pid:none) Listeria welshimeri serovar 6b ... 71 1e-10
CP001001_3778(CP001001|pid:none) Methylobacterium radiotolerans ... 70 1e-10
AP008934_768(AP008934|pid:none) Staphylococcus saprophyticus sub... 70 1e-10
AM746676_6959(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 70 1e-10
CP001025_2516(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 70 2e-10
CP000449_828(CP000449|pid:none) Maricaulis maris MCS10, complete... 70 2e-10
CP000048_707(CP000048|pid:none) Borrelia hermsii DAH, complete g... 70 2e-10
BX294144_194(BX294144|pid:none) Rhodopirellula baltica SH 1 comp... 70 2e-10
CP000440_2659(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 70 2e-10
CP000151_2764(CP000151|pid:none) Burkholderia sp. 383 chromosome... 70 2e-10
AM910995_22(AM910995|pid:none) Plasmodium knowlesi strain H chro... 70 2e-10
AL954747_947(AL954747|pid:none) Nitrosomonas europaea ATCC 19718... 70 2e-10
CP000847_1201(CP000847|pid:none) Rickettsia akari str. Hartford,... 70 2e-10
CP000542_1510(CP000542|pid:none) Verminephrobacter eiseniae EF01... 70 2e-10
CP000248_126(CP000248|pid:none) Novosphingobium aromaticivorans ... 70 2e-10
AL935258_266(AL935258|pid:none) Lactobacillus plantarum strain W... 70 2e-10
CP000927_4468(CP000927|pid:none) Caulobacter sp. K31, complete g... 70 2e-10
AM055942_83(AM055942|pid:none) Toxoplasma gondii RH, genomic DNA... 70 2e-10
AM889285_3322(AM889285|pid:none) Gluconacetobacter diazotrophicu... 69 3e-10
CP000817_964(CP000817|pid:none) Lysinibacillus sphaericus C3-41,... 69 3e-10
CP001189_2977(CP001189|pid:none) Gluconacetobacter diazotrophicu... 69 3e-10
CP000383_2382(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 69 3e-10
CP000049_706(CP000049|pid:none) Borrelia turicatae 91E135, compl... 69 3e-10
BA000040_2570(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 69 4e-10
AE014291_393(AE014291|pid:none) Brucella suis 1330 chromosome I,... 69 4e-10
CP000450_2245(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 69 4e-10
CP000879_1714(CP000879|pid:none) Petrotoga mobilis SJ95, complet... 69 4e-10
AB3443(AB3443) sua5 protein [imported] - Brucella melitensis (st... 69 4e-10
AM295250_1610(AM295250|pid:none) Staphylococcus carnosus subsp. ... 69 4e-10
(P39153) RecName: Full=Uncharacterized protein ywlC; &AL009126_... 69 4e-10
AE017198_773(AE017198|pid:none) Lactobacillus johnsonii NCC 533,... 69 4e-10
AE017261_944(AE017261|pid:none) Picrophilus torridus DSM 9790, c... 69 5e-10
CP000614_2700(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 69 5e-10
AP009351_2030(AP009351|pid:none) Staphylococcus aureus subsp. au... 69 5e-10
CP000253_2225(CP000253|pid:none) Staphylococcus aureus subsp. au... 69 5e-10
CP000758_523(CP000758|pid:none) Ochrobactrum anthropi ATCC 49188... 69 5e-10
CP000492_476(CP000492|pid:none) Chlorobium phaeobacteroides DSM ... 69 5e-10
AM747720_2830(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 69 5e-10
AE017197_801(AE017197|pid:none) Rickettsia typhi str. Wilmington... 68 6e-10
CP000087_1358(CP000087|pid:none) Rickettsia bellii RML369-C, com... 68 6e-10
AJ235273_136(AJ235273|pid:none) Rickettsia prowazekii strain Mad... 68 6e-10
CP000849_140(CP000849|pid:none) Rickettsia bellii OSU 85-389, co... 68 6e-10
AL445063_298(AL445063|pid:none) Thermoplasma acidophilum complet... 68 6e-10
CP000830_3068(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 68 8e-10
CP000409_1050(CP000409|pid:none) Rickettsia canadensis str. McKi... 68 8e-10
CP001014_1709(CP001014|pid:none) Thermoproteus neutrophilus V24S... 67 1e-09
CP000239_1579(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 67 1e-09
CP001612_985(CP001612|pid:none) Rickettsia africae ESF-5, comple... 67 1e-09
CP001227_888(CP001227|pid:none) Rickettsia peacockii str. Rustic... 67 1e-09
CP000993_693(CP000993|pid:none) Borrelia recurrentis A1, complet... 67 1e-09
CP000376_29(CP000376|pid:none) Silicibacter sp. TM1040 mega plas... 67 1e-09
CU928171_721(CU928171|pid:none) Kluyveromyces thermotolerans str... 67 1e-09
CP001102_686(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 67 1e-09
AE006914_1315(AE006914|pid:none) Rickettsia conorii str. Malish ... 67 1e-09
CR936503_1132(CR936503|pid:none) Lactobacillus sakei strain 23K ... 67 1e-09
AP009484_1772(AP009484|pid:none) Macrococcus caseolyticus JCSC54... 67 1e-09
CP001280_434(CP001280|pid:none) Methylocella silvestris BL2, com... 67 1e-09
BX640415_202(BX640415|pid:none) Bordetella pertussis strain Toha... 67 2e-09
BX640441_118(BX640441|pid:none) Bordetella bronchiseptica strain... 67 2e-09
CP000378_1996(CP000378|pid:none) Burkholderia cenocepacia AU 105... 67 2e-09
CU928181_110(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 67 2e-09
AE004437_1778(AE004437|pid:none) Halobacterium sp. NRC-1, comple... 67 2e-09
AE016795_387(AE016795|pid:none) Vibrio vulnificus CMCP6 chromoso... 67 2e-09
BX842646_314(BX842646|pid:none) Bdellovibrio bacteriovorus compl... 67 2e-09
CP000539_3786(CP000539|pid:none) Acidovorax sp. JS42, complete g... 66 2e-09
CP000697_226(CP000697|pid:none) Acidiphilium cryptum JF-5, compl... 66 2e-09
AP007171_660(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 66 2e-09
CP000395_741(CP000395|pid:none) Borrelia afzelii PKo, complete g... 66 2e-09
CP000559_1225(CP000559|pid:none) Methanocorpusculum labreanum Z,... 66 2e-09
CP000096_1648(CP000096|pid:none) Pelodictyon luteolum DSM 273, c... 66 2e-09
CP000884_987(CP000884|pid:none) Delftia acidovorans SPH-1, compl... 66 2e-09
CU633438_932(CU633438|pid:none) Podospora anserina genomic DNA c... 66 2e-09
AE016823_1671(AE016823|pid:none) Leptospira interrogans serovar ... 66 3e-09
CP000033_726(CP000033|pid:none) Lactobacillus acidophilus NCFM, ... 66 3e-09
CP000716_223(CP000716|pid:none) Thermosipho melanesiensis BI429,... 66 3e-09
AE010300_2208(AE010300|pid:none) Leptospira interrogans serovar ... 66 3e-09
AP009384_407(AP009384|pid:none) Azorhizobium caulinodans ORS 571... 66 3e-09
CR940352_451(CR940352|pid:none) Theileria annulata strain Ankara... 65 4e-09
FN392319_1106(FN392319|pid:none) Pichia pastoris GS115 chromosom... 65 5e-09
CP000866_1423(CP000866|pid:none) Nitrosopumilus maritimus SCM1, ... 64 9e-09
CP000699_75(CP000699|pid:none) Sphingomonas wittichii RW1, compl... 64 1e-08
CP000504_372(CP000504|pid:none) Pyrobaculum islandicum DSM 4184,... 64 1e-08
CP000013_723(CP000013|pid:none) Borrelia garinii PBi, complete g... 64 1e-08
AY714830_28(AY714830|pid:none) Uncultured archaeon GZfos19C7 clo... 64 2e-08
AE017221_439(AE017221|pid:none) Thermus thermophilus HB27, compl... 64 2e-08
CP000493_742(CP000493|pid:none) Hyperthermus butylicus DSM 5456,... 64 2e-08
CR628337_2916(CR628337|pid:none) Legionella pneumophila str. Len... 64 2e-08
CP000133_883(CP000133|pid:none) Rhizobium etli CFN 42, complete ... 63 2e-08
CP000356_1756(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 63 2e-08
CP000477_448(CP000477|pid:none) Methanosaeta thermophila PT, com... 63 2e-08
CP000512_4483(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 62 3e-08
AE009951_463(AE009951|pid:none) Fusobacterium nucleatum subsp. n... 62 4e-08
AY596297_2306(AY596297|pid:none) Haloarcula marismortui ATCC 430... 62 4e-08
CP001389_475(CP001389|pid:none) Rhizobium sp. NGR234, complete g... 62 6e-08
AM236080_970(AM236080|pid:none) Rhizobium leguminosarum bv. vici... 62 6e-08
AL591688_870(AL591688|pid:none) Sinorhizobium meliloti 1021 comp... 62 6e-08
AE016818_46(AE016818|pid:none) Ashbya gossypii (= Eremothecium g... 62 6e-08
CP000678_612(CP000678|pid:none) Methanobrevibacter smithii ATCC ... 61 8e-08
CP001074_973(CP001074|pid:none) Rhizobium etli CIAT 652, complet... 61 8e-08
CP001618_1283(CP001618|pid:none) Beutenbergia cavernae DSM 12333... 61 1e-07
CP001322_2043(CP001322|pid:none) Desulfatibacillum alkenivorans ... 61 1e-07
CP000675_3172(CP000675|pid:none) Legionella pneumophila str. Cor... 61 1e-07
BX908798_193(BX908798|pid:none) Parachlamydia-related symbiont U... 61 1e-07
E97447(E97447)hypothetical protein AGR_C_1315 [imported] - Agrob... 60 2e-07
AE007869_709(AE007869|pid:none) Agrobacterium tumefaciens str. C... 60 2e-07
CP001101_461(CP001101|pid:none) Chlorobium phaeobacteroides BS1,... 60 2e-07
AE014184_433(AE014184|pid:none) Tropheryma whipplei str. Twist, ... 59 3e-07
CR522870_2187(CR522870|pid:none) Desulfotalea psychrophila LSv54... 59 3e-07
AP008981_942(AP008981|pid:none) Orientia tsutsugamushi str. Iked... 59 4e-07
AP009493_2174(AP009493|pid:none) Streptomyces griseus subsp. gri... 59 4e-07
AM406671_555(AM406671|pid:none) Lactococcus lactis subsp. cremor... 59 5e-07
CP001033_1000(CP001033|pid:none) Streptococcus pneumoniae CGSP14... 59 5e-07
AM114193_719(AM114193|pid:none) Uncultured methanogenic archaeon... 58 6e-07
CP000384_3868(CP000384|pid:none) Mycobacterium sp. MCS, complete... 58 6e-07
CP000252_721(CP000252|pid:none) Syntrophus aciditrophicus SB, co... 58 6e-07
BX897700_336(BX897700|pid:none) Bartonella quintana str. Toulous... 58 6e-07
AE017321_634(AE017321|pid:none) Wolbachia endosymbiont strain TR... 58 8e-07
AM999887_132(AM999887|pid:none) Wolbachia endosymbiont of Culex ... 58 8e-07
AL939123_140(AL939123|pid:none) Streptomyces coelicolor A3(2) co... 58 8e-07
CP000920_942(CP000920|pid:none) Streptococcus pneumoniae P1031, ... 58 8e-07
CP001389_644(CP001389|pid:none) Rhizobium sp. NGR234, complete g... 57 1e-06
CP000407_842(CP000407|pid:none) Streptococcus suis 05ZYH33, comp... 57 2e-06
CP000769_1400(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 57 2e-06
CP000968_1461(CP000968|pid:none) Candidatus Korarchaeum cryptofi... 57 2e-06
CP000628_886(CP000628|pid:none) Agrobacterium radiobacter K84 ch... 56 2e-06
CR931997_1344(CR931997|pid:none) Corynebacterium jeikeium K411 c... 56 2e-06
CP000750_1256(CP000750|pid:none) Kineococcus radiotolerans SRS30... 56 2e-06
CU469464_174(CU469464|pid:none) Candidatus Phytoplasma mali stra... 56 3e-06
CP001129_995(CP001129|pid:none) Streptococcus equi subsp. zooepi... 55 4e-06
CP000024_728(CP000024|pid:none) Streptococcus thermophilus CNRZ1... 55 4e-06
CP000023_715(CP000023|pid:none) Streptococcus thermophilus LMG 1... 55 4e-06
CP001322_926(CP001322|pid:none) Desulfatibacillum alkenivorans A... 55 5e-06
CP001230_1651(CP001230|pid:none) Persephonella marina EX-H1, com... 55 5e-06
AE007317_926(AE007317|pid:none) Streptococcus pneumoniae R6, com... 55 5e-06
CP000410_852(CP000410|pid:none) Streptococcus pneumoniae D39, co... 55 5e-06
CP000816_372(CP000816|pid:none) Ignicoccus hospitalis KIN4/I, co... 55 7e-06
CP000934_3516(CP000934|pid:none) Cellvibrio japonicus Ueda107, c... 55 7e-06
CP001391_661(CP001391|pid:none) Wolbachia sp. wRi, complete geno... 54 9e-06
CU458896_1427(CU458896|pid:none) Mycobacterium abscessus chromos... 54 9e-06
CP000509_1716(CP000509|pid:none) Nocardioides sp. JS614, complet... 54 1e-05
AE017283_1233(AE017283|pid:none) Propionibacterium acnes KPA1712... 54 1e-05
AM946015_856(AM946015|pid:none) Streptococcus uberis 0140J compl... 54 1e-05
AE005672_960(AE005672|pid:none) Streptococcus pneumoniae TIGR4, ... 54 2e-05
CP001131_1393(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 54 2e-05
AL766848_194(AL766848|pid:none) Streptococcus agalactiae NEM316 ... 54 2e-05
CP000473_7011(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 54 2e-05
CP000114_1055(CP000114|pid:none) Streptococcus agalactiae A909, ... 54 2e-05
CP000780_1965(CP000780|pid:none) Candidatus Methanoregula boonei... 53 2e-05
CP000088_2410(CP000088|pid:none) Thermobifida fusca YX, complete... 53 3e-05
AP011115_1191(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 52 4e-05
CP001601_1061(CP001601|pid:none) Corynebacterium aurimucosum ATC... 52 4e-05
CP000359_754(CP000359|pid:none) Deinococcus geothermalis DSM 113... 52 4e-05
CP000387_1092(CP000387|pid:none) Streptococcus sanguinis SK36, c... 52 4e-05
CP001359_1484(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 52 4e-05
CP000745_1178(CP000745|pid:none) Methanococcus maripaludis C7, c... 52 4e-05
(Q10618) RecName: Full=Uncharacterized protein Rv1301/MT1340; &... 52 4e-05
(Q0VTD8) RecName: Full=Putative ribosome maturation factor rimN;... 52 4e-05
CP000431_1460(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 52 5e-05
CP000609_1470(CP000609|pid:none) Methanococcus maripaludis C5, c... 52 6e-05
CP001462_5(CP001462|pid:none) Borrelia burgdorferi WI91-23 plasm... 51 8e-05
AM942444_707(AM942444|pid:none) Corynebacterium urealyticum DSM ... 51 8e-05
AE001582_11(AE001582|pid:none) Borrelia burgdorferi B31 plasmid ... 51 8e-05
CP000471_3419(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 51 8e-05
CP000688_746(CP000688|pid:none) Dehalococcoides sp. BAV1, comple... 51 8e-05
AJ965256_683(AJ965256|pid:none) Dehalococcoides sp. CBDB1 comple... 51 8e-05
CP000656_2291(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 51 1e-04
CP000003_861(CP000003|pid:none) Streptococcus pyogenes MGAS10394... 50 1e-04
EU961515_1(EU961515|pid:none) Zea mays clone 236070 ischemia/rep... 50 1e-04
AE014074_801(AE014074|pid:none) Streptococcus pyogenes MGAS315, ... 50 1e-04
CP000829_841(CP000829|pid:none) Streptococcus pyogenes NZ131, co... 50 1e-04
CP000056_837(CP000056|pid:none) Streptococcus pyogenes MGAS6180,... 50 1e-04
AE014133_988(AE014133|pid:none) Streptococcus mutans UA159, comp... 50 1e-04
AE004092_870(AE004092|pid:none) Streptococcus pyogenes M1 GAS, c... 50 1e-04
CP001229_1357(CP001229|pid:none) Sulfurihydrogenibium azorense A... 50 2e-04
CP000235_720(CP000235|pid:none) Anaplasma phagocytophilum HZ, co... 50 2e-04
CP000112_2285(CP000112|pid:none) Desulfovibrio desulfuricans G20... 50 2e-04
CP000786_1798(CP000786|pid:none) Leptospira biflexa serovar Pato... 50 2e-04
AK067825_1(AK067825|pid:none) Oryza sativa Japonica Group cDNA c... 50 2e-04
CP000251_2446(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 49 3e-04
CP000850_3877(CP000850|pid:none) Salinispora arenicola CNS-205, ... 49 3e-04
CP000360_2608(CP000360|pid:none) Acidobacteria bacterium Ellin34... 49 3e-04
CR767821_304(CR767821|pid:none) Ehrlichia ruminantium strain Wel... 49 3e-04
AP009153_1683(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 49 4e-04
AM711867_1178(AM711867|pid:none) Clavibacter michiganensis subsp... 49 4e-04
(A1WZH9) RecName: Full=Putative ribosome maturation factor rimN;... 49 4e-04
AP010904_2290(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 49 4e-04
CP000262_1014(CP000262|pid:none) Streptococcus pyogenes MGAS1075... 49 4e-04
CP000236_765(CP000236|pid:none) Ehrlichia chaffeensis str. Arkan... 49 5e-04
CP001287_2527(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 49 5e-04
(Q60369) RecName: Full=Uncharacterized protein MJ0062; &F64307(... 49 5e-04
AE009950_1216(AE009950|pid:none) Pyrococcus furiosus DSM 3638, c... 48 7e-04
AE009948_1048(AE009948|pid:none) Streptococcus agalactiae 2603V/... 48 7e-04
CP001087_2450(CP001087|pid:none) Desulfobacterium autotrophicum ... 48 9e-04
AM849034_1470(AM849034|pid:none) Clavibacter michiganensis subsp... 47 0.001
CP001358_736(CP001358|pid:none) Desulfovibrio desulfuricans subs... 47 0.001
BT075468_1(BT075468|pid:none) Osmerus mordax clone omor-eva-514-... 47 0.002
CP000472_61(CP000472|pid:none) Shewanella piezotolerans WP3, com... 47 0.002
CP001089_1820(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 47 0.002
(A5F4C5) RecName: Full=Putative ribosome maturation factor rimN;... 47 0.002
AP009510_670(AP009510|pid:none) Uncultured Termite group 1 bacte... 46 0.003
(Q1Q7W4) RecName: Full=Putative ribosome maturation factor rimN;... 46 0.003
AF378867_1(AF378867|pid:none) Arabidopsis thaliana AT5g60590/muf... 46 0.003
GN109890_1(GN109890|pid:none) Sequence 14671 from Patent WO20090... 46 0.003
AE002160_403(AE002160|pid:none) Chlamydia muridarum Nigg, comple... 46 0.003
AP006618_1063(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 46 0.003
GN109892_1(GN109892|pid:none) Sequence 14673 from Patent WO20090... 46 0.003
BC090125_1(BC090125|pid:none) Xenopus tropicalis yrdC domain con... 46 0.003
CP000454_2595(CP000454|pid:none) Arthrobacter sp. FB24, complete... 46 0.003
(A9N9G8) RecName: Full=Putative ribosome maturation factor rimN;... 45 0.004
(Q83AA2) RecName: Full=Putative ribosome maturation factor rimN;... 45 0.004
(Q1I2G9) RecName: Full=Putative ribosome maturation factor rimN;... 45 0.006
(Q0VC80) RecName: Full=YrdC domain-containing protein, mitochond... 45 0.006
CP000350_2637(CP000350|pid:none) Leptospira borgpetersenii serov... 45 0.006
CP001124_1301(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 45 0.006
AP009044_1299(AP009044|pid:none) Corynebacterium glutamicum R DN... 45 0.006
CP001080_927(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1... 45 0.006
AX063729_1(AX063729|pid:none) Sequence 11 from Patent WO0100843.... 45 0.006
AE014295_1635(AE014295|pid:none) Bifidobacterium longum NCC2705,... 45 0.006
CP001197_838(CP001197|pid:none) Desulfovibrio vulgaris str. 'Miy... 45 0.006
CP001095_557(CP001095|pid:none) Bifidobacterium longum subsp. in... 45 0.006
CP000348_2647(CP000348|pid:none) Leptospira borgpetersenii serov... 45 0.007
(Q3U5F4) RecName: Full=YrdC domain-containing protein, mitochond... 45 0.007
(Q8EKQ3) RecName: Full=Putative ribosome maturation factor rimN;... 45 0.007
(A6VL69) RecName: Full=Putative ribosome maturation factor rimN;... 45 0.007
AP010656_597(AP010656|pid:none) Candidatus Azobacteroides pseudo... 45 0.007
AL606933_5(AL606933|pid:none) Mouse DNA sequence from clone RP23... 45 0.007
BC023823_1(BC023823|pid:none) Mus musculus yrdC domain containin... 45 0.007
AM398681_1591(AM398681|pid:none) Flavobacterium psychrophilum JI... 45 0.007
AY283537_1(AY283537|pid:none) Mus musculus ischemia/reperfusion ... 45 0.007
(A5VWK1) RecName: Full=Putative ribosome maturation factor rimN;... 45 0.007
(B0KF32) RecName: Full=Putative ribosome maturation factor rimN;... 45 0.007
(A6UX84) RecName: Full=Putative ribosome maturation factor rimN;... 44 0.010
AP009152_969(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, c... 44 0.010
(A8GYH9) RecName: Full=Putative ribosome maturation factor rimN;... 44 0.010
(A0KR66) RecName: Full=Putative ribosome maturation factor rimN;... 44 0.010
CP000117_1482(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 44 0.010
(B1J499) RecName: Full=Putative ribosome maturation factor rimN;... 44 0.010
(A1TWN4) RecName: Full=Putative ribosome maturation factor rimN;... 44 0.012
(Q0HPA1) RecName: Full=Putative ribosome maturation factor rimN;... 44 0.012
AM920689_3976(AM920689|pid:none) Xanthomonas campestris pv. camp... 44 0.012
CP000806_4199(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 44 0.012
CP000581_390(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 44 0.012
(Q4FPS7) RecName: Full=Putative ribosome maturation factor rimN;... 44 0.012
CP001114_937(CP001114|pid:none) Deinococcus deserti VCD115, comp... 44 0.012
(Q603G8) RecName: Full=Putative ribosome maturation factor rimN;... 44 0.012
BC088428_1(BC088428|pid:none) Rattus norvegicus yrdC domain cont... 44 0.016
(Q499R4) RecName: Full=YrdC domain-containing protein, mitochond... 44 0.016
AM398681_850(AM398681|pid:none) Flavobacterium psychrophilum JIP... 44 0.016
CP001339_184(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, c... 44 0.016
(A3N1E4) RecName: Full=Putative ribosome maturation factor rimN;... 44 0.016
(B0BQ80) RecName: Full=Putative ribosome maturation factor rimN;... 44 0.016
(Q02V59) RecName: Full=Putative ribosome maturation factor rimN;... 44 0.016
CP001091_1198(CP001091|pid:none) Actinobacillus pleuropneumoniae... 44 0.016
CP000140_3290(CP000140|pid:none) Parabacteroides distasonis ATCC... 44 0.016
BA000035_1304(BA000035|pid:none) Corynebacterium efficiens YS-31... 44 0.016
(Q48AU1) RecName: Full=Putative ribosome maturation factor rimN;... 44 0.016
(A1S1K5) RecName: Full=Putative ribosome maturation factor rimN; 44 0.016
CP000478_2099(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 43 0.021
CP000251_1683(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 43 0.021
CP000821_1686(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 43 0.021
(Q7P0L7) RecName: Full=Putative ribosome maturation factor rimN;... 43 0.021
AM469365_1(AM469365|pid:none) Vitis vinifera contig VV78X085782.... 43 0.021
CP001574_451(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 43 0.021
CP000513_322(CP000513|pid:none) Dichelobacter nodosus VCS1703A, ... 43 0.021
AM884176_388(AM884176|pid:none) Chlamydia trachomatis strain L2/... 43 0.028
DQ311234_1(DQ311234|pid:none) Bombyx mori ischemia/reperfusion i... 43 0.028
CP001037_3436(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 43 0.028
BC088928_1(BC088928|pid:none) Xenopus laevis hypothetical LOC496... 43 0.028
CP001131_2152(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 43 0.028
AD1821(AD1821) hypothetical protein alr0116 [imported] - Nostoc ... 43 0.028
CP000910_1411(CP000910|pid:none) Renibacterium salmoninarum ATCC... 42 0.036
AP009256_448(AP009256|pid:none) Bifidobacterium adolescentis ATC... 42 0.036
(Q88B46) RecName: Full=Putative ribosome maturation factor rimN;... 42 0.036
AE000513_1823(AE000513|pid:none) Deinococcus radiodurans R1 chro... 42 0.036
CP000575_532(CP000575|pid:none) Staphylothermus marinus F1, comp... 42 0.036
CP000685_2905(CP000685|pid:none) Flavobacterium johnsoniae UW101... 42 0.047
(Q7VNS3) RecName: Full=Putative ribosome maturation factor rimN;... 42 0.047
(Q5QXJ5) RecName: Full=Putative ribosome maturation factor rimN;... 42 0.047
(B0TLD6) RecName: Full=Putative ribosome maturation factor rimN;... 42 0.062
AE013599_3242(AE013599|pid:none) Drosophila melanogaster chromos... 42 0.062
AP006841_3898(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 42 0.062
CP000961_2882(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 42 0.062
CP000383_1059(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 42 0.062
(B2SL46) RecName: Full=Putative ribosome maturation factor rimN;... 42 0.062
CP001616_159(CP001616|pid:none) Tolumonas auensis DSM 9187, comp... 42 0.062
AE015924_1682(AE015924|pid:none) Porphyromonas gingivalis W83, c... 41 0.081
CP000113_3742(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 41 0.081
AE000657_462(AE000657|pid:none) Aquifex aeolicus VF5, complete g... 41 0.081
CP000148_1577(CP000148|pid:none) Geobacter metallireducens GS-15... 41 0.081
GN109898_1(GN109898|pid:none) Sequence 14679 from Patent WO20090... 41 0.081
AP009380_1895(AP009380|pid:none) Porphyromonas gingivalis ATCC 3... 41 0.081
CP001213_1039(CP001213|pid:none) Bifidobacterium animalis subsp.... 41 0.081
AE017180_1586(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 41 0.081
(A4WF91) RecName: Full=Putative ribosome maturation factor rimN; 41 0.11
BC008984_1(BC008984|pid:none) Homo sapiens yrdC domain containin... 41 0.11
AY286019_1(AY286019|pid:none) Homo sapiens ischemia/reperfusion ... 41 0.11
CP001139_2547(CP001139|pid:none) Vibrio fischeri MJ11 chromosome... 41 0.11
(Q5E1R5) RecName: Full=Putative ribosome maturation factor rimN;... 41 0.11
CP001357_1747(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 41 0.11
(Q86U90) RecName: Full=YrdC domain-containing protein, mitochond... 41 0.11
AE017283_1074(AE017283|pid:none) Propionibacterium acnes KPA1712... 40 0.14
FM178379_82(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ch... 40 0.14
GN109880_1(GN109880|pid:none) Sequence 14661 from Patent WO20090... 40 0.14
CP001344_28(CP001344|pid:none) Cyanothece sp. PCC 7425, complete... 40 0.14
CR848038_492(CR848038|pid:none) Chlamydophila abortus strain S26... 40 0.14
(B1KCX0) RecName: Full=Putative ribosome maturation factor rimN;... 40 0.14
(Q87KE2) RecName: Full=Putative ribosome maturation factor rimN;... 40 0.14
(Q4KKQ6) RecName: Full=Putative ribosome maturation factor rimN;... 40 0.14
(Q7VQB9) RecName: Full=Putative ribosome maturation factor rimN;... 40 0.14
CP000472_1835(CP000472|pid:none) Shewanella piezotolerans WP3, c... 40 0.14
CP000606_2242(CP000606|pid:none) Shewanella loihica PV-4, comple... 40 0.18
CP000828_4184(CP000828|pid:none) Acaryochloris marina MBIC11017,... 40 0.18
(A3QJE8) RecName: Full=Putative ribosome maturation factor rimN;... 40 0.18
AM778958_504(AM778958|pid:none) Microcystis aeruginosa PCC 7806 ... 40 0.18
(Q12TA0) RecName: Full=Putative ribosome maturation factor rimN;... 40 0.18
AM778931_55(AM778931|pid:none) Microcystis aeruginosa PCC 7806 g... 40 0.18
CP000698_1882(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 40 0.18
(Q3BNJ9) RecName: Full=Putative ribosome maturation factor rimN;... 40 0.18
AE015928_3941(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 40 0.24
(Q8K977) RecName: Full=Putative ribosome maturation factor rimN;... 40 0.24
CP000964_430(CP000964|pid:none) Klebsiella pneumoniae 342, compl... 40 0.24
(Q8PG13) RecName: Full=Putative ribosome maturation factor rimN;... 40 0.24
CP000386_1630(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 40 0.24
(Q1H4G9) RecName: Full=Putative ribosome maturation factor rimN;... 40 0.24
CU207366_2256(CU207366|pid:none) Gramella forsetii KT0803 comple... 40 0.24
(Q3J7C4) RecName: Full=Putative ribosome maturation factor rimN;... 39 0.31
CP000576_345(CP000576|pid:none) Prochlorococcus marinus str. MIT... 39 0.31
CP000474_2492(CP000474|pid:none) Arthrobacter aurescens TC1, com... 39 0.31
AP008231_2230(AP008231|pid:none) Synechococcus elongatus PCC 630... 39 0.31
CP000100_1862(CP000100|pid:none) Synechococcus elongatus PCC 794... 39 0.31
CP000713_2356(CP000713|pid:none) Psychrobacter sp. PRwf-1, compl... 39 0.31
AP006725_4534(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 39 0.31
CP000471_1818(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 39 0.40
(A3M154) RecName: Full=Putative ribosome maturation factor rimN;... 39 0.40
AM181176_21(AM181176|pid:none) Pseudomonas fluorescens SBW25 com... 39 0.40
(Q0A5B4) RecName: Full=Putative ribosome maturation factor rimN;... 38 0.69
AE016825_1694(AE016825|pid:none) Chromobacterium violaceum ATCC ... 38 0.69
(A1SR31) RecName: Full=Putative ribosome maturation factor rimN;... 38 0.69
(A5UE77) RecName: Full=Putative ribosome maturation factor rimN;... 38 0.69
CP000644_1293(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 38 0.69
CP000941_1755(CP000941|pid:none) Xylella fastidiosa M12, complet... 38 0.90
CP000926_3979(CP000926|pid:none) Pseudomonas putida GB-1, comple... 38 0.90
CP000934_1749(CP000934|pid:none) Cellvibrio japonicus Ueda107, c... 38 0.90
CP000931_2598(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 38 0.90
(B2FIS1) RecName: Full=Putative ribosome maturation factor rimN;... 37 1.2
AE015451_4439(AE015451|pid:none) Pseudomonas putida KT2440 compl... 37 1.2
(Q6LLJ9) RecName: Full=Putative ribosome maturation factor rimN; 37 1.2
AE010300_21(AE010300|pid:none) Leptospira interrogans serovar la... 37 1.2
CR378674_155(CR378674|pid:none) Photobacterium profundum SS9; se... 37 1.2
CP000462_2842(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 37 1.2
CP000270_2836(CP000270|pid:none) Burkholderia xenovorans LB400 c... 37 1.5
(Q21PU1) RecName: Full=Putative ribosome maturation factor rimN;... 37 1.5
BC169844_1(BC169844|pid:none) Xenopus laevis transmembrane prote... 37 1.5
BC169842_1(BC169842|pid:none) Xenopus laevis cDNA clone MGC:1965... 37 1.5
CR954246_1256(CR954246|pid:none) Pseudoalteromonas haloplanktis ... 37 1.5
(A9MN84) RecName: Full=Putative ribosome maturation factor rimN; 37 2.0
(Q5F5I5) RecName: Full=Putative ribosome maturation factor rimN; 37 2.0
(Q2NQQ7) RecName: Full=Putative ribosome maturation factor rimN;... 37 2.0
CP000880_4060(CP000880|pid:none) Salmonella enterica subsp. ariz... 37 2.0
CP001277_1542(CP001277|pid:none) Candidatus Hamiltonella defensa... 37 2.0
CP000116_1527(CP000116|pid:none) Thiobacillus denitrificans ATCC... 37 2.0
AE004969_1779(AE004969|pid:none) Neisseria gonorrhoeae FA 1090, ... 37 2.0
CU207211_2055(CU207211|pid:none) Herminiimonas arsenicoxydans ch... 36 2.6
CP001287_2320(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 36 2.6
(A5UHE9) RecName: Full=Putative ribosome maturation factor rimN;... 36 2.6
(P44807) RecName: Full=Putative ribosome maturation factor rimN;... 36 2.6
CP001025_1987(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 36 2.6
CP000058_3378(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 36 3.4
AE015928_4126(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 36 3.4
DQ423214_2(DQ423214|pid:none) Haemophilus influenzae strain 11P6... 36 3.4
BA000022_1653(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 36 3.4
CP000949_3764(CP000949|pid:none) Pseudomonas putida W619, comple... 36 3.4
CR555306_3500(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 36 3.4
CP000614_2152(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 36 3.4
CP000030_297(CP000030|pid:none) Anaplasma marginale str. St. Mar... 36 3.4
CP001079_291(CP001079|pid:none) Anaplasma marginale str. Florida... 36 3.4
CP001127_3337(CP001127|pid:none) Salmonella enterica subsp. ente... 35 4.4
(Q0T019) RecName: Full=Putative ribosome maturation factor rimN;... 35 4.4
CP000090_1097(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 35 4.4
CP000507_2120(CP000507|pid:none) Shewanella amazonensis SB2B, co... 35 4.4
CP000680_1824(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 35 4.4
BA000039_143(BA000039|pid:none) Thermosynechococcus elongatus BP... 35 4.4
CP000393_560(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 35 4.4
(A7N129) RecName: Full=Putative ribosome maturation factor rimN;... 35 4.4
GN109896_1(GN109896|pid:none) Sequence 14677 from Patent WO20090... 35 4.4
BX548174_328(BX548174|pid:none) Prochlorococcus marinus MED4 com... 35 4.4
BA000031_1953(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22... 35 4.4
CP000266_3057(CP000266|pid:none) Shigella flexneri 5 str. 8401, ... 35 4.4
AM167904_2595(AM167904|pid:none) Bordetella avium 197N complete ... 35 5.8
>CP000853_2536(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,
complete genome.
Length = 349
Score = 97.1 bits (240), Expect = 1e-18
Identities = 46/96 (47%), Positives = 66/96 (68%)
Frame = +3
Query: 321 LIEAGNKIKNGGLVAFPTETVYGLGANALDKDAVLSIFKAKGRPLTDPVTVHIIESEYAX 500
++E G+ ++NGG+VAFPTETVYGLGANALD +A+ IF+AKGRP +P+ VHI + E
Sbjct: 15 IVECGSILRNGGVVAFPTETVYGLGANALDANAIKKIFEAKGRPSDNPLIVHIAKKE--- 71
Query: 501 XXXXXXXXXXXIFQVLSDNFWPGPLTIVAKSSELXP 608
I ++L + FWPGPLT++ + S++ P
Sbjct: 72 DVIPLVKNIPEIGRILMEKFWPGPLTLLFEKSDIIP 107
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,200,845,233
Number of extensions: 16635184
Number of successful extensions: 39257
Number of sequences better than 10.0: 531
Number of HSP's gapped: 38931
Number of HSP's successfully gapped: 548
Length of query: 426
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 295
Effective length of database: 627,191,635
Effective search space: 185021532325
Effective search space used: 185021532325
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
2 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |