| Contig-U11364-1 |
| Contig ID |
Contig-U11364-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1377 |
| Chromosome number (1..6, M) |
6 |
| Chromosome length |
3595308 |
| Start point |
1973752 |
| End point |
1972616 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
3 |
| Number of EST |
4 |
| Link to clone list |
U11364 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.24 |
| Homology vs DNA |
Query= Contig-U11364-1 (Contig-U11364-1Q) /CSM_Contig/Contig-U11364-1Q.Seq.d
(1387 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU264066) Dictyostelium discoideum vegetative cDNA clone:VS... 1096 0.0 1
(BJ334117) Dictyostelium discoideum cDNA clone:dda45o01, 5' ... 1092 0.0 1
(C89936) Dictyostelium discoideum slug cDNA, clone SSG642. 464 0.0 3
(AU073311) Dictyostelium discoideum slug cDNA, clone SSG642. 325 e-112 2
(BJ339006) Dictyostelium discoideum cDNA clone:dda63e22, 5' ... 311 2e-83 2
(BJ387510) Dictyostelium discoideum cDNA clone:dds3f03, 5' e... 321 4e-83 1
(BJ391233) Dictyostelium discoideum cDNA clone:dds15a19, 5' ... 319 2e-82 1
(BJ393212) Dictyostelium discoideum cDNA clone:dds30d13, 5' ... 317 6e-82 1
(BJ339138) Dictyostelium discoideum cDNA clone:dda64d10, 5' ... 317 6e-82 1
(BJ333892) Dictyostelium discoideum cDNA clone:dda44l10, 5' ... 313 1e-81 2
(BJ331234) Dictyostelium discoideum cDNA clone:dda34a15, 5' ... 305 1e-81 2
(BJ333022) Dictyostelium discoideum cDNA clone:dda41o05, 5' ... 313 1e-81 2
(BJ423422) Dictyostelium discoideum cDNA clone:ddv49k06, 5' ... 315 2e-81 1
(BJ332644) Dictyostelium discoideum cDNA clone:dda39g21, 5' ... 315 2e-81 1
(BJ358551) Dictyostelium discoideum cDNA clone:ddc10i06, 5' ... 313 3e-81 2
(BJ422943) Dictyostelium discoideum cDNA clone:ddv47e17, 5' ... 313 1e-80 1
(BJ422613) Dictyostelium discoideum cDNA clone:ddv46c13, 5' ... 313 1e-80 1
(BJ422180) Dictyostelium discoideum cDNA clone:ddv45j03, 5' ... 313 1e-80 1
(BJ421666) Dictyostelium discoideum cDNA clone:ddv43n11, 5' ... 313 1e-80 1
(BJ419855) Dictyostelium discoideum cDNA clone:ddv37n09, 5' ... 313 1e-80 1
(BJ417250) Dictyostelium discoideum cDNA clone:ddv30a05, 5' ... 313 1e-80 1
(BJ416539) Dictyostelium discoideum cDNA clone:ddv26b19, 5' ... 313 1e-80 1
(BJ415397) Dictyostelium discoideum cDNA clone:ddv22n12, 5' ... 313 1e-80 1
(BJ411494) Dictyostelium discoideum cDNA clone:ddv4l18, 5' e... 313 1e-80 1
(BJ411375) Dictyostelium discoideum cDNA clone:ddv4l06, 5' e... 313 1e-80 1
(BJ410963) Dictyostelium discoideum cDNA clone:ddv2b17, 5' e... 313 1e-80 1
(BJ396385) Dictyostelium discoideum cDNA clone:dds42b20, 5' ... 313 1e-80 1
(BJ395940) Dictyostelium discoideum cDNA clone:dds40b24, 5' ... 313 1e-80 1
(BJ395747) Dictyostelium discoideum cDNA clone:dds40c03, 5' ... 313 1e-80 1
(BJ394340) Dictyostelium discoideum cDNA clone:dds34a22, 5' ... 313 1e-80 1
(BJ393355) Dictyostelium discoideum cDNA clone:dds31d05, 5' ... 313 1e-80 1
(BJ393272) Dictyostelium discoideum cDNA clone:dds30b21, 5' ... 313 1e-80 1
(BJ391015) Dictyostelium discoideum cDNA clone:dds14m15, 5' ... 313 1e-80 1
(BJ390424) Dictyostelium discoideum cDNA clone:dds22j10, 5' ... 313 1e-80 1
(BJ390304) Dictyostelium discoideum cDNA clone:dds21n19, 5' ... 313 1e-80 1
(BJ388083) Dictyostelium discoideum cDNA clone:dds7f24, 5' e... 313 1e-80 1
(BJ387961) Dictyostelium discoideum cDNA clone:dds7k02, 5' e... 313 1e-80 1
(BJ370451) Dictyostelium discoideum cDNA clone:ddc54n02, 5' ... 313 1e-80 1
(BJ369688) Dictyostelium discoideum cDNA clone:ddc51m09, 5' ... 313 1e-80 1
(BJ368554) Dictyostelium discoideum cDNA clone:ddc47n02, 5' ... 313 1e-80 1
(BJ367373) Dictyostelium discoideum cDNA clone:ddc42p12, 5' ... 313 1e-80 1
(BJ363762) Dictyostelium discoideum cDNA clone:ddc28j12, 5' ... 313 1e-80 1
(BJ363632) Dictyostelium discoideum cDNA clone:ddc27m13, 5' ... 313 1e-80 1
(BJ362902) Dictyostelium discoideum cDNA clone:ddc24a01, 5' ... 313 1e-80 1
(BJ361530) Dictyostelium discoideum cDNA clone:ddc17f17, 5' ... 313 1e-80 1
(BJ361142) Dictyostelium discoideum cDNA clone:ddc9f04, 5' e... 313 1e-80 1
(BJ360612) Dictyostelium discoideum cDNA clone:ddc7a02, 5' e... 313 1e-80 1
(BJ359760) Dictyostelium discoideum cDNA clone:ddc2k09, 5' e... 313 1e-80 1
(BJ358858) Dictyostelium discoideum cDNA clone:ddc11m13, 5' ... 313 1e-80 1
(BJ351734) Dictyostelium discoideum cDNA clone:dda44n09, 3' ... 313 1e-80 1
(BJ338443) Dictyostelium discoideum cDNA clone:dda61e16, 5' ... 313 1e-80 1
(BJ338142) Dictyostelium discoideum cDNA clone:dda60c07, 5' ... 313 1e-80 1
(BJ334179) Dictyostelium discoideum cDNA clone:dda45m09, 5' ... 313 1e-80 1
(BJ333899) Dictyostelium discoideum cDNA clone:dda44n09, 5' ... 313 1e-80 1
(BJ333576) Dictyostelium discoideum cDNA clone:dda43a09, 5' ... 313 1e-80 1
(BJ332764) Dictyostelium discoideum cDNA clone:dda40b22, 5' ... 313 1e-80 1
(BJ332414) Dictyostelium discoideum cDNA clone:dda39d01, 5' ... 313 1e-80 1
(BJ332389) Dictyostelium discoideum cDNA clone:dda38n24, 5' ... 313 1e-80 1
(BJ332097) Dictyostelium discoideum cDNA clone:dda37p02, 5' ... 313 1e-80 1
(BJ331711) Dictyostelium discoideum cDNA clone:dda36c21, 5' ... 313 1e-80 1
(BJ331689) Dictyostelium discoideum cDNA clone:dda36l18, 5' ... 313 1e-80 1
(BJ327434) Dictyostelium discoideum cDNA clone:dda20n07, 5' ... 313 1e-80 1
(BJ324600) Dictyostelium discoideum cDNA clone:dda7h01, 5' e... 313 1e-80 1
(BJ323878) Dictyostelium discoideum cDNA clone:dda12n17, 5' ... 313 1e-80 1
(X00601) Dictyostelium discoideum ribosomal RNA gene. 311 4e-80 1
(AY171066) Dictyostelium discoideum extrachromosomal palindr... 311 4e-80 1
(AU272380) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 311 4e-80 1
(BJ445649) Dictyostelium discoideum cDNA clone:ddv60n02, 3' ... 311 4e-80 1
(BJ427062) Dictyostelium discoideum cDNA clone:ddv61l04, 5' ... 311 4e-80 1
(BJ426767) Dictyostelium discoideum cDNA clone:ddv60n02, 5' ... 311 4e-80 1
(BJ425283) Dictyostelium discoideum cDNA clone:ddv55a10, 5' ... 311 4e-80 1
(BJ425067) Dictyostelium discoideum cDNA clone:ddv54c18, 5' ... 311 4e-80 1
(BJ424674) Dictyostelium discoideum cDNA clone:ddv53n05, 5' ... 311 4e-80 1
(BJ424211) Dictyostelium discoideum cDNA clone:ddv51b20, 5' ... 311 4e-80 1
(BJ423783) Dictyostelium discoideum cDNA clone:ddv50l08, 5' ... 311 4e-80 1
(BJ421169) Dictyostelium discoideum cDNA clone:ddv41o19, 5' ... 311 4e-80 1
(BJ421147) Dictyostelium discoideum cDNA clone:ddv41j20, 5' ... 311 4e-80 1
(BJ420688) Dictyostelium discoideum cDNA clone:ddv40i06, 5' ... 311 4e-80 1
(BJ420013) Dictyostelium discoideum cDNA clone:ddv37o21, 5' ... 311 4e-80 1
(BJ419963) Dictyostelium discoideum cDNA clone:ddv37d20, 5' ... 311 4e-80 1
(BJ419549) Dictyostelium discoideum cDNA clone:ddv36o07, 5' ... 311 4e-80 1
(BJ418679) Dictyostelium discoideum cDNA clone:ddv33j16, 5' ... 311 4e-80 1
(BJ418605) Dictyostelium discoideum cDNA clone:ddv33k08, 5' ... 311 4e-80 1
(BJ418236) Dictyostelium discoideum cDNA clone:ddv32h05, 5' ... 311 4e-80 1
(BJ415820) Dictyostelium discoideum cDNA clone:ddv23i19, 5' ... 311 4e-80 1
(BJ415357) Dictyostelium discoideum cDNA clone:ddv22f09, 5' ... 311 4e-80 1
(BJ414970) Dictyostelium discoideum cDNA clone:ddv21d04, 5' ... 311 4e-80 1
(BJ413988) Dictyostelium discoideum cDNA clone:ddv17l18, 5' ... 311 4e-80 1
(BJ413550) Dictyostelium discoideum cDNA clone:ddv16n01, 5' ... 311 4e-80 1
(BJ413105) Dictyostelium discoideum cDNA clone:ddv14n06, 5' ... 311 4e-80 1
(BJ410044) Dictyostelium discoideum cDNA clone:ddv11b05, 5' ... 311 4e-80 1
(BJ409876) Dictyostelium discoideum cDNA clone:ddv10i12, 5' ... 311 4e-80 1
(BJ396145) Dictyostelium discoideum cDNA clone:dds41d18, 5' ... 311 4e-80 1
(BJ395419) Dictyostelium discoideum cDNA clone:dds38e24, 5' ... 311 4e-80 1
(BJ394349) Dictyostelium discoideum cDNA clone:dds34d19, 5' ... 311 4e-80 1
(BJ390732) Dictyostelium discoideum cDNA clone:dds23d15, 5' ... 311 4e-80 1
(BJ370514) Dictyostelium discoideum cDNA clone:ddc54k11, 5' ... 311 4e-80 1
(BJ369474) Dictyostelium discoideum cDNA clone:ddc50o17, 5' ... 311 4e-80 1
(BJ368340) Dictyostelium discoideum cDNA clone:ddc46f07, 5' ... 311 4e-80 1
(BJ367708) Dictyostelium discoideum cDNA clone:ddc43o17, 5' ... 311 4e-80 1
>(AU264066) Dictyostelium discoideum vegetative cDNA clone:VSD458,
5' end single read.
Length = 602
Score = 1096 bits (553), Expect = 0.0
Identities = 553/553 (100%)
Strand = Plus / Plus
Query: 157 cacacacactcataaaatgcactctccaagagatacaagacataataatggaagttcaaa 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26 cacacacactcataaaatgcactctccaagagatacaagacataataatggaagttcaaa 85
Query: 217 tggcgatggttcaagccataattataaagatgaccaaagtagagataactataaagatga 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 tggcgatggttcaagccataattataaagatgaccaaagtagagataactataaagatga 145
Query: 277 tgaagacagagactttgaaagaaaaatgagatcacccccaacatcttcagaatctccacc 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tgaagacagagactttgaaagaaaaatgagatcacccccaacatcttcagaatctccacc 205
Query: 337 aaataccaatacatcatcagataataatgtcgatcaaaacaatggcaatactttacatgt 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aaataccaatacatcatcagataataatgtcgatcaaaacaatggcaatactttacatgt 265
Query: 397 atccaacctcaacccaagaacaagagaatccgatctaagagacacatttgcatcaattgg 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atccaacctcaacccaagaacaagagaatccgatctaagagacacatttgcatcaattgg 325
Query: 457 aaaagttatagattgcactattttattagatccaaatactaaagaatcaagaggattcgg 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aaaagttatagattgcactattttattagatccaaatactaaagaatcaagaggattcgg 385
Query: 517 ttttgtaacatattcaagtggcgatgaagctcaagatgccattcaacgtttagattccac 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ttttgtaacatattcaagtggcgatgaagctcaagatgccattcaacgtttagattccac 445
Query: 577 aaaaattgatggaaatacaattagagttgaaaaatcaaagagatcaaaagcacgtgaccc 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aaaaattgatggaaatacaattagagttgaaaaatcaaagagatcaaaagcacgtgaccc 505
Query: 637 aactcctggtttttatatgggtagtgaaagaaaaaagagaccatatggaaataattttgg 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aactcctggtttttatatgggtagtgaaagaaaaaagagaccatatggaaataattttgg 565
Query: 697 tggaccaaatcaa 709
|||||||||||||
Sbjct: 566 tggaccaaatcaa 578
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,171,585,597
Number of extensions: 68401378
Number of successful extensions: 5254198
Number of sequences better than 10.0: 933
Length of query: 1387
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1363
Effective length of database: 97,308,875,965
Effective search space: 132631997940295
Effective search space used: 132631997940295
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.29 |
| Homology vs Protein |
Query= Contig-U11364-1 (Contig-U11364-1Q) /CSM_Contig/Contig-U11364-1Q.Seq.d
(1387 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JC7299(JC7299)transformer-2-like protein - liverwort (Marchantia... 99 5e-19
BT040220_1(BT040220|pid:none) Zea mays full-length cDNA clone ZM... 98 6e-19
EU960438_1(EU960438|pid:none) Zea mays clone 224893 arginine/ser... 98 8e-19
AK070807_1(AK070807|pid:none) Oryza sativa Japonica Group cDNA c... 98 8e-19
EU162609_38(EU162609|pid:none) Cleome spinosa clone contig83 BAC... 96 2e-18
AK103177_1(AK103177|pid:none) Oryza sativa Japonica Group cDNA c... 95 5e-18
BT005797_1(BT005797|pid:none) Arabidopsis thaliana clone C105468... 95 7e-18
AY050800_1(AY050800|pid:none) Arabidopsis thaliana putative tran... 95 7e-18
BT061421_1(BT061421|pid:none) Zea mays full-length cDNA clone ZM... 94 9e-18
AM270126_21(AM270126|pid:none) Aspergillus niger contig An07c008... 94 1e-17
AP007151_225(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 94 1e-17
DQ019631_1(DQ019631|pid:none) Triticum aestivum alternative spli... 94 1e-17
AC022464_31(AC022464|pid:none) Genomic sequence for Arabidopsis ... 94 2e-17
BT023741_1(BT023741|pid:none) Arabidopsis thaliana At4g35785 gen... 90 2e-16
T03986(T03986) transformer-SR ribonucleoprotein - common tobacco... 87 1e-15
CU640366_1180(CU640366|pid:none) Podospora anserina genomic DNA ... 86 2e-15
AL513445_14(AL513445|pid:none) Neurospora crassa DNA linkage gro... 82 5e-14
AE017341_252(AE017341|pid:none) Cryptococcus neoformans var. neo... 77 2e-12
AE017341_374(AE017341|pid:none) Cryptococcus neoformans var. neo... 76 3e-12
CR858515_1(CR858515|pid:none) Pongo abelii mRNA; cDNA DKFZp468L1... 75 4e-12
AP008209_1008(AP008209|pid:none) Oryza sativa (japonica cultivar... 75 4e-12
AK064923_1(AK064923|pid:none) Oryza sativa Japonica Group cDNA c... 75 6e-12
BC086795_1(BC086795|pid:none) Mus musculus splicing factor, argi... 75 7e-12
(P62995) RecName: Full=Transformer-2 protein homolog beta; AltNa... 75 7e-12
AF057159_3(AF057159|pid:none) Homo sapiens transformer-2-beta (S... 75 7e-12
AB171721_1(AB171721|pid:none) Macaca fascicularis brain cDNA clo... 75 7e-12
BC077018_1(BC077018|pid:none) Xenopus tropicalis splicing factor... 74 1e-11
EU797611_1(EU797611|pid:none) Ovis aries TRA2A mRNA, complete cds. 74 2e-11
AB159268_1(AB159268|pid:none) Oryzias latipes Tra2a2 mRNA for tr... 73 2e-11
AB079122_1(AB079122|pid:none) Oryzias latipes Tra2b mRNA for tra... 73 3e-11
AB159275_1(AB159275|pid:none) Oryzias latipes Tra2b6 mRNA for tr... 73 3e-11
AB159271_1(AB159271|pid:none) Oryzias latipes Tra2b2 mRNA for tr... 73 3e-11
AB159273_1(AB159273|pid:none) Oryzias latipes Tra2b4 mRNA for tr... 73 3e-11
(Q6PFR5) RecName: Full=Transformer-2 protein homolog alpha; AltN... 72 4e-11
BC161978_1(BC161978|pid:none) Rattus norvegicus transformer-2 al... 72 4e-11
DQ972958_1(DQ972958|pid:none) Sus scrofa TRA2A mRNA, complete cds. 72 4e-11
EU962536_1(EU962536|pid:none) Zea mays clone 243514 unknown mRNA. 72 4e-11
AB173584_1(AB173584|pid:none) Macaca fascicularis brain cDNA clo... 72 4e-11
EU964628_1(EU964628|pid:none) Zea mays clone 280456 glycine-rich... 72 4e-11
AM920435_1013(AM920435|pid:none) Penicillium chrysogenum Wiscons... 72 5e-11
BT084556_1(BT084556|pid:none) Zea mays full-length cDNA clone ZM... 72 5e-11
BT045504_1(BT045504|pid:none) Salmo salar clone ssal-rgf-523-155... 71 8e-11
Z99259_18(Z99259|pid:none) S.pombe chromosome I cosmid c2C4. 71 8e-11
AJ719598_1(AJ719598|pid:none) Gallus gallus mRNA for hypothetica... 70 2e-10
(Q54Y98) RecName: Full=Transformer-2-beta homolog; AltName: Full... 70 2e-10
AF216753_1(AF216753|pid:none) Rattus norvegicus CArG-binding fac... 70 2e-10
U02019_1(U02019|pid:none) Human AU-rich element RNA-binding prot... 70 2e-10
BC139674_1(BC139674|pid:none) Danio rerio heterogeneous nuclear ... 70 2e-10
AF108653_1(AF108653|pid:none) Rattus norvegicus nucleic acid bin... 70 2e-10
AF026126_3(AF026126|pid:none) Homo sapiens heterogeneous nuclear... 70 2e-10
AY640106_1(AY640106|pid:none) Xenopus tropicalis AUF1 mRNA, comp... 70 2e-10
CP000533_110(CP000533|pid:none) Polaromonas naphthalenivorans CJ... 70 2e-10
I49069(I49069) A+U-rich RNA-binding protein - mouse (fragment) ... 70 2e-10
AK076132_1(AK076132|pid:none) Mus musculus 10, 11 days embryo wh... 70 2e-10
D55671_1(D55671|pid:none) Human mRNA for heterogeneous nuclear r... 70 2e-10
AL645602_4(AL645602|pid:none) Mouse DNA sequence from clone RP23... 70 2e-10
AL645602_3(AL645602|pid:none) Mouse DNA sequence from clone RP23... 70 2e-10
A54601(A54601)RNA-binding protein AUF1 - human 70 2e-10
AJ238854_1(AJ238854|pid:none) Rattus norvegicus mRNA for type A/... 70 2e-10
(Q99020) RecName: Full=Heterogeneous nuclear ribonucleoprotein A... 70 2e-10
(Q60668) RecName: Full=Heterogeneous nuclear ribonucleoprotein D... 69 3e-10
I49070(I49070) A+U-rich RNA-binding protein - mouse &U11274_1(U... 69 3e-10
BT030594_1(BT030594|pid:none) Bos taurus heterogeneous nuclear r... 69 3e-10
AF093414_1(AF093414|pid:none) Saguinus oedipus estrogen response... 69 3e-10
BC049098_1(BC049098|pid:none) Mus musculus heterogeneous nuclear... 69 3e-10
BC146038_1(BC146038|pid:none) Bos taurus heterogeneous nuclear r... 69 3e-10
BC011172_1(BC011172|pid:none) Mus musculus heterogeneous nuclear... 69 3e-10
AY048973_1(AY048973|pid:none) Solanum tuberosum RNA-binding prot... 69 3e-10
D55673_1(D55673|pid:none) Human mRNA for heterogeneous nuclear r... 69 3e-10
AB046616_1(AB046616|pid:none) Rattus norvegicus mRNA for RNA bin... 69 4e-10
AK297686_1(AK297686|pid:none) Homo sapiens cDNA FLJ60713 complet... 69 4e-10
AK223425_1(AK223425|pid:none) Homo sapiens mRNA for heterogeneou... 69 4e-10
AK097657_1(AK097657|pid:none) Homo sapiens cDNA FLJ40338 fis, cl... 69 4e-10
AY726540_1(AY726540|pid:none) Xenopus laevis p37 AUF1 mRNA, comp... 69 4e-10
AB304402_1(AB304402|pid:none) Sus scrofa CBF-A mRNA for CArG-bin... 69 4e-10
AB463727_1(AB463727|pid:none) Synthetic construct DNA, clone: pF... 69 4e-10
M65028_1(M65028|pid:none) Human hnRNP type A/B protein mRNA, com... 69 5e-10
AJ720813_1(AJ720813|pid:none) Gallus gallus mRNA for hypothetica... 69 5e-10
AB046617_1(AB046617|pid:none) Rattus norvegicus mRNA for RNA bin... 69 5e-10
AF496713_1(AF496713|pid:none) Zea mays cultivar B_6 glycine-rich... 68 7e-10
AF496702_1(AF496702|pid:none) Zea mays cultivar H_1 glycine-rich... 68 7e-10
EU959113_1(EU959113|pid:none) Zea mays clone 210450 glycine-rich... 68 7e-10
BT035966_1(BT035966|pid:none) Zea mays full-length cDNA clone ZM... 68 7e-10
AF496726_1(AF496726|pid:none) Zea mays cultivar F_1 glycine-rich... 68 7e-10
EU960303_1(EU960303|pid:none) Zea mays clone 223385 glycine-rich... 68 7e-10
AF496724_1(AF496724|pid:none) Zea mays cultivar D_7 glycine-rich... 68 7e-10
AF034945_1(AF034945|pid:none) Zea mays glycine-rich RNA binding ... 68 7e-10
AB062911_1(AB062911|pid:none) Physcomitrella patens PpGRP3 mRNA ... 68 7e-10
AF496716_1(AF496716|pid:none) Zea mays cultivar B73 glycine-rich... 68 7e-10
AF496712_1(AF496712|pid:none) Zea mays cultivar H_4 glycine-rich... 68 7e-10
AF496703_1(AF496703|pid:none) Zea mays cultivar C_5 glycine-rich... 68 7e-10
AF496715_1(AF496715|pid:none) Zea mays cultivar F_2 glycine-rich... 68 9e-10
BC049051_1(BC049051|pid:none) Danio rerio splicing factor, argin... 68 9e-10
FN323507_1(FN323507|pid:none) Schistosoma japonicum isolate Anhu... 68 9e-10
AF064592_1(AF064592|pid:none) Schistosoma japonicum RNA-binding ... 68 9e-10
BT074603_1(BT074603|pid:none) Osmerus mordax clone omor-rgc-514-... 68 9e-10
FN323494_1(FN323494|pid:none) Schistosoma japonicum isolate Anhu... 68 9e-10
FN367827_6(FN367827|pid:none) Schistosoma mansoni genome sequenc... 68 9e-10
EF148189_1(EF148189|pid:none) Populus trichocarpa clone WS0128_I... 68 9e-10
FN367827_5(FN367827|pid:none) Schistosoma mansoni genome sequenc... 68 9e-10
(Q9ZUU4) RecName: Full=Putative ribonucleoprotein At2g37220, chl... 67 1e-09
S56750(S56750)single stranded D box binding factor 2 - chicken 67 1e-09
EF678280_1(EF678280|pid:none) Picea sitchensis clone WS02912_F09... 67 1e-09
EU963124_1(EU963124|pid:none) Zea mays clone 257985 unknown mRNA. 67 1e-09
FN316499_1(FN316499|pid:none) Schistosoma japonicum isolate Anhu... 67 1e-09
FB912277_1(FB912277|pid:none) Sequence 131550 from Patent WO2008... 67 1e-09
CR382133_554(CR382133|pid:none) Debaryomyces hansenii strain CBS... 67 1e-09
FB912193_1(FB912193|pid:none) Sequence 131466 from Patent WO2008... 67 1e-09
BC073641_1(BC073641|pid:none) Xenopus laevis MGC82977 protein, m... 67 1e-09
AK120874_1(AK120874|pid:none) Oryza sativa Japonica Group cDNA c... 67 1e-09
FB872092_1(FB872092|pid:none) Sequence 91365 from Patent WO20080... 67 1e-09
FN323502_1(FN323502|pid:none) Schistosoma japonicum isolate Anhu... 67 1e-09
BT014844_1(BT014844|pid:none) Arabidopsis thaliana At4g13860 gen... 67 1e-09
BT043341_1(BT043341|pid:none) Zea mays full-length cDNA clone ZM... 67 1e-09
AY088648_1(AY088648|pid:none) Arabidopsis thaliana clone 8849 mR... 67 1e-09
S56751(S56751) single stranded D box binding factor 1 - chicken ... 67 1e-09
EU960539_1(EU960539|pid:none) Zea mays clone 225963 ELAV-like pr... 67 2e-09
CP000316_616(CP000316|pid:none) Polaromonas sp. JS666, complete ... 67 2e-09
AM910990_10(AM910990|pid:none) Plasmodium knowlesi strain H chro... 67 2e-09
BC074599_1(BC074599|pid:none) Xenopus tropicalis transformer-2 a... 67 2e-09
EU076902_1(EU076902|pid:none) Bambusa oldhamii putative glycine-... 67 2e-09
BT050206_1(BT050206|pid:none) Salmo salar clone ssal-evf-501-088... 67 2e-09
AM478333_2(AM478333|pid:none) Vitis vinifera contig VV78X160178.... 67 2e-09
AK019388_1(AK019388|pid:none) Mus musculus 12 days embryo head c... 67 2e-09
AY892769_1(AY892769|pid:none) Synthetic construct Homo sapiens c... 67 2e-09
CP000529_1915(CP000529|pid:none) Polaromonas naphthalenivorans C... 67 2e-09
AC087412_4(AC087412|pid:none) Oryza sativa chromosome 3 BAC OSJN... 67 2e-09
AB044535_1(AB044535|pid:none) Xenopus laevis xCIRP2 mRNA for col... 67 2e-09
(Q13151) RecName: Full=Heterogeneous nuclear ribonucleoprotein A... 67 2e-09
EF085266_1(EF085266|pid:none) Picea sitchensis clone WS02718_G07... 67 2e-09
AF389431_1(AF389431|pid:none) Solanum tuberosum single-stranded ... 67 2e-09
BC045260_1(BC045260|pid:none) Xenopus laevis heterogeneous ribon... 66 3e-09
BT085576_1(BT085576|pid:none) Zea mays full-length cDNA clone ZM... 66 3e-09
CP001392_3422(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 66 3e-09
AM910991_245(AM910991|pid:none) Plasmodium knowlesi strain H chr... 66 3e-09
CP000316_4803(CP000316|pid:none) Polaromonas sp. JS666, complete... 66 3e-09
(Q08937) RecName: Full=29 kDa ribonucleoprotein B, chloroplastic... 66 3e-09
AE017282_947(AE017282|pid:none) Methylococcus capsulatus str. Ba... 66 3e-09
FJ499499_1(FJ499499|pid:none) Metarhizium anisopliae cold respon... 66 3e-09
BC084487_1(BC084487|pid:none) Xenopus tropicalis heterogeneous n... 66 3e-09
CP001108_1196(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 66 3e-09
BT068264_1(BT068264|pid:none) Zea mays full-length cDNA clone ZM... 66 3e-09
AP007157_331(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 66 3e-09
FN316492_1(FN316492|pid:none) Schistosoma japonicum isolate Anhu... 66 3e-09
AF496708_1(AF496708|pid:none) Zea mays cultivar H_3 glycine-rich... 66 3e-09
(P49314) RecName: Full=31 kDa ribonucleoprotein, chloroplastic; ... 66 3e-09
BT084162_1(BT084162|pid:none) Zea mays full-length cDNA clone ZM... 66 3e-09
BC066681_1(BC066681|pid:none) Danio rerio zgc:77052, mRNA (cDNA ... 66 3e-09
EF144922_1(EF144922|pid:none) Populus trichocarpa clone WS01119_... 66 3e-09
BT038707_1(BT038707|pid:none) Zea mays full-length cDNA clone ZM... 66 3e-09
(Q3SWU3) RecName: Full=Heterogeneous nuclear ribonucleoprotein D... 66 3e-09
AK135733_1(AK135733|pid:none) Mus musculus in vitro fertilized e... 65 4e-09
CP001100_1585(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 65 4e-09
(O89086) RecName: Full=Putative RNA-binding protein 3; AltName: ... 65 4e-09
AE017347_305(AE017347|pid:none) Cryptococcus neoformans var. neo... 65 4e-09
AB085214_1(AB085214|pid:none) Hyla japonica cirp-beta mRNA for c... 65 4e-09
(P49313) RecName: Full=30 kDa ribonucleoprotein, chloroplastic; ... 65 4e-09
BC041204_1(BC041204|pid:none) Xenopus laevis cold inducible RNA-... 65 4e-09
(A4F5G6) RecName: Full=RNA-binding protein 9; AltName: Full=RNA-... 65 4e-09
BC055525_1(BC055525|pid:none) Danio rerio heterogeneous nuclear ... 65 4e-09
AJ719821_1(AJ719821|pid:none) Gallus gallus mRNA for hypothetica... 65 4e-09
DQ440325_1(DQ440325|pid:none) Aedes aegypti clone AET-4179 predi... 65 4e-09
BC167421_1(BC167421|pid:none) Xenopus tropicalis heterogeneous n... 65 6e-09
AF496709_1(AF496709|pid:none) Zea mays cultivar H_5 glycine-rich... 65 6e-09
AF496717_1(AF496717|pid:none) Zea mays cultivar I_1 glycine-rich... 65 6e-09
BC161598_1(BC161598|pid:none) Xenopus tropicalis heterogeneous n... 65 6e-09
BT033180_1(BT033180|pid:none) Zea mays full-length cDNA clone ZM... 65 6e-09
BT081976_1(BT081976|pid:none) Drosophila melanogaster MIP01221 f... 65 6e-09
AF496719_1(AF496719|pid:none) Zea mays cultivar IVANA glycine-ri... 65 6e-09
CP001097_2035(CP001097|pid:none) Chlorobium limicola DSM 245, co... 65 6e-09
AE014134_2288(AE014134|pid:none) Drosophila melanogaster chromos... 65 6e-09
EU960614_1(EU960614|pid:none) Zea mays clone 226607 splicing fac... 65 6e-09
AF496718_1(AF496718|pid:none) Zea mays cultivar CO109 glycine-ri... 65 6e-09
CP000512_4693(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 65 6e-09
BC155920_1(BC155920|pid:none) Xenopus laevis hypothetical protei... 65 6e-09
BC025279_1(BC025279|pid:none) Homo sapiens scaffold attachment f... 65 8e-09
BT043684_1(BT043684|pid:none) Salmo salar clone HM5_1838 hyperos... 65 8e-09
BT053782_1(BT053782|pid:none) Zea mays full-length cDNA clone ZM... 65 8e-09
AF034741_1(AF034741|pid:none) Macropus eugenii heterogeneous nuc... 65 8e-09
AK160816_1(AK160816|pid:none) Mus musculus 17 days embryo head c... 65 8e-09
EU492544_1(EU492544|pid:none) Penaeus monodon transformer-2 prot... 65 8e-09
BC045023_1(BC045023|pid:none) Xenopus laevis heterogeneous nucle... 65 8e-09
BT057440_1(BT057440|pid:none) Salmo salar clone ssal-evf-569-239... 65 8e-09
BC070649_1(BC070649|pid:none) Xenopus laevis hypothetical protei... 65 8e-09
EF576487_1(EF576487|pid:none) Oryza sativa (indica cultivar-grou... 65 8e-09
(Q8BIF2) RecName: Full=Fox-1 homolog C; &AL591075_9(AL591075|pi... 65 8e-09
BC071067_1(BC071067|pid:none) Xenopus laevis hypothetical protei... 65 8e-09
U79565_1(U79565|pid:none) Macropus eugenii RBM1 mRNA, complete c... 65 8e-09
(Q14151) RecName: Full=Scaffold attachment factor B2; S... 65 8e-09
EU492545_1(EU492545|pid:none) Penaeus monodon variant transforme... 65 8e-09
AB299206_1(AB299206|pid:none) Rana rugosa Tra2 mRNA for transfor... 65 8e-09
AL591075_6(AL591075|pid:none) Mouse DNA sequence from clone RP23... 65 8e-09
BC014784_1(BC014784|pid:none) Homo sapiens scaffold attachment f... 65 8e-09
AP004339_10(AP004339|pid:none) Oryza sativa Japonica Group genom... 65 8e-09
EU960096_1(EU960096|pid:none) Zea mays clone 221668 ribonucleopr... 64 1e-08
CP000685_1297(CP000685|pid:none) Flavobacterium johnsoniae UW101... 64 1e-08
AY072407_1(AY072407|pid:none) Arabidopsis thaliana eukaryotic tr... 64 1e-08
AF031933_1(AF031933|pid:none) Euphorbia esula glycine-rich RNA-b... 64 1e-08
FB912267_1(FB912267|pid:none) Sequence 131540 from Patent WO2008... 64 1e-08
AB008268_3(AB008268|pid:none) Arabidopsis thaliana genomic DNA, ... 64 1e-08
AL035528_25(AL035528|pid:none) Arabidopsis thaliana DNA chromoso... 64 1e-08
CP001032_940(CP001032|pid:none) Opitutus terrae PB90-1, complete... 64 1e-08
BC157792_1(BC157792|pid:none) Xenopus tropicalis hypothetical pr... 64 1e-08
BT062575_1(BT062575|pid:none) Zea mays full-length cDNA clone ZM... 64 1e-08
CP000539_2842(CP000539|pid:none) Acidovorax sp. JS42, complete g... 64 1e-08
AF153444_1(AF153444|pid:none) Felis catus hnRNP A/B related prot... 64 1e-08
AY085838_1(AY085838|pid:none) Arabidopsis thaliana clone 18903 m... 64 1e-08
AF496723_1(AF496723|pid:none) Zea mays cultivar TX601 glycine-ri... 64 1e-08
BC158333_1(BC158333|pid:none) Xenopus tropicalis hypothetical pr... 64 1e-08
DQ191652_1(DQ191652|pid:none) Solanum tuberosum RNA binding prot... 64 1e-08
CP000140_908(CP000140|pid:none) Parabacteroides distasonis ATCC ... 64 1e-08
BC045229_1(BC045229|pid:none) Xenopus laevis splicing factor, ar... 64 1e-08
AP001297_2(AP001297|pid:none) Arabidopsis thaliana genomic DNA, ... 64 1e-08
(P17130) RecName: Full=Heterogeneous nuclear ribonucleoproteins ... 64 1e-08
BC072090_1(BC072090|pid:none) Xenopus laevis ribonucleoprotein A... 64 1e-08
CU633867_79(CU633867|pid:none) Podospora anserina genomic DNA ch... 64 1e-08
FB912191_1(FB912191|pid:none) Sequence 131464 from Patent WO2008... 64 1e-08
BC169881_1(BC169881|pid:none) Xenopus laevis cDNA clone MGC:1966... 64 2e-08
(P51968) RecName: Full=Heterogeneous nuclear ribonucleoprotein A... 64 2e-08
AE014186_260(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 64 2e-08
D31711_1(D31711|pid:none) Arabidopsis thaliana gene for RNA-bind... 64 2e-08
BT077974_1(BT077974|pid:none) Lepeophtheirus salmonis clone lsal... 64 2e-08
BX649404_2(BX649404|pid:none) Zebrafish DNA sequence from clone ... 64 2e-08
(P51992) RecName: Full=Heterogeneous nuclear ribonucleoprotein A... 64 2e-08
(Q32P51) RecName: Full=Heterogeneous nuclear ribonucleoprotein A... 64 2e-08
FN357365_17(FN357365|pid:none) Schistosoma mansoni genome sequen... 64 2e-08
AY394938_1(AY394938|pid:none) Danio rerio clone RK045A2G06 RNA b... 64 2e-08
AP008216_335(AP008216|pid:none) Oryza sativa (japonica cultivar-... 64 2e-08
BX842649_260(BX842649|pid:none) Bdellovibrio bacteriovorus compl... 64 2e-08
BT043600_1(BT043600|pid:none) Salmo salar clone HM4_3127 heterog... 64 2e-08
(Q43349) RecName: Full=29 kDa ribonucleoprotein, chloroplastic; ... 64 2e-08
D31710_1(D31710|pid:none) Arabidopsis thaliana gene for RNA-bind... 64 2e-08
BX649404_1(BX649404|pid:none) Zebrafish DNA sequence from clone ... 64 2e-08
CP000254_345(CP000254|pid:none) Methanospirillum hungatei JF-1, ... 64 2e-08
DQ126684_1(DQ126684|pid:none) Gallus gallus aggrecan promoter bi... 63 2e-08
BC134448_1(BC134448|pid:none) Bos taurus heterogeneous nuclear r... 63 2e-08
AK298176_1(AK298176|pid:none) Homo sapiens cDNA FLJ51587 complet... 63 2e-08
S40777(S40777;S41738)heterogeneous ribonuclear particle protein ... 63 2e-08
T09704(T09704) probable arginine/serine-rich splicing factor - a... 63 2e-08
AF056324_1(AF056324|pid:none) Rattus norvegicus scaffold attachm... 63 2e-08
BT045197_1(BT045197|pid:none) Salmo salar clone ssal-rgf-514-254... 63 2e-08
BT030654_1(BT030654|pid:none) Arabidopsis thaliana unknown prote... 63 2e-08
AJ717349_1(AJ717349|pid:none) Danio rerio mRNA for RNA binding m... 63 2e-08
AM431355_1(AM431355|pid:none) Vitis vinifera contig VV78X065835.... 63 2e-08
AB066484_1(AB066484|pid:none) Homo sapiens hnrpdl mRNA for JKTBP... 63 2e-08
BT052594_1(BT052594|pid:none) Medicago truncatula clone MTYFD_FE... 63 2e-08
DQ215543_1(DQ215543|pid:none) Taeniopygia guttata clone 0058P006... 63 2e-08
AJ719636_1(AJ719636|pid:none) Gallus gallus mRNA for hypothetica... 63 2e-08
AK146630_1(AK146630|pid:none) Mus musculus 17 days embryo kidney... 63 2e-08
BC062235_1(BC062235|pid:none) Rattus norvegicus heterogeneous nu... 63 2e-08
(Q9Z130) RecName: Full=Heterogeneous nuclear ribonucleoprotein D... 63 2e-08
AB170166_1(AB170166|pid:none) Macaca fascicularis brain cDNA clo... 63 2e-08
(P09651) RecName: Full=Heterogeneous nuclear ribonucleoprotein A... 63 2e-08
AB306286_1(AB306286|pid:none) Alligator mississippiensis CIRBP m... 63 2e-08
A86320(A86320) hypothetical protein F26I16.3 - Arabidopsis thali... 63 2e-08
DQ215534_1(DQ215534|pid:none) Taeniopygia guttata clone 0063P001... 63 2e-08
CP000749_1521(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 63 2e-08
(P0C7M2) RecName: Full=Putative heterogeneous nuclear ribonucleo... 63 2e-08
AF036339_1(AF036339|pid:none) Euphorbia esula glycine-rich RNA-b... 63 2e-08
DQ215533_1(DQ215533|pid:none) Taeniopygia guttata clone 0058P002... 63 2e-08
S02061(S02061) heterogeneous ribonuclear particle protein A1.bet... 63 2e-08
(O88453) RecName: Full=Scaffold attachment factor B1; S... 63 2e-08
AK169216_1(AK169216|pid:none) Mus musculus 16 days embryo kidney... 63 2e-08
AB017018_2(AB017018|pid:none) Homo sapiens genes for JKTBP2, JKT... 63 2e-08
DQ120655_1(DQ120655|pid:none) Cercopithecus sabaeus RBM1 gene, p... 63 2e-08
AK303303_1(AK303303|pid:none) Homo sapiens cDNA FLJ51586 complet... 63 2e-08
EF146013_1(EF146013|pid:none) Populus trichocarpa clone WS0114_O... 63 2e-08
CP001101_100(CP001101|pid:none) Chlorobium phaeobacteroides BS1,... 63 3e-08
BC050855_1(BC050855|pid:none) Mus musculus scaffold attachment f... 63 3e-08
AK172898_1(AK172898|pid:none) Mus musculus premature mRNA for mK... 63 3e-08
(Q80YR5) RecName: Full=Scaffold attachment factor B2; S... 63 3e-08
(O74400) RecName: Full=Uncharacterized RNA-binding protein C4F6.... 63 3e-08
BC065971_1(BC065971|pid:none) Danio rerio zgc:55876, mRNA (cDNA ... 63 3e-08
AK069121_1(AK069121|pid:none) Oryza sativa Japonica Group cDNA c... 63 3e-08
AC144459_16(AC144459|pid:none) Medicago truncatula clone mth2-23... 63 3e-08
DQ216893_1(DQ216893|pid:none) Taeniopygia guttata clone 0058P004... 63 3e-08
AM950286_1(AM950286|pid:none) Chironomus tentans mRNA for SR fam... 63 3e-08
CP000975_286(CP000975|pid:none) Methylacidiphilum infernorum V4,... 63 3e-08
DQ215539_1(DQ215539|pid:none) Taeniopygia guttata clone 0063P002... 63 3e-08
(O02008) RecName: Full=Transformer-2 sex-determining protein; &... 62 4e-08
AB168869_1(AB168869|pid:none) Macaca fascicularis testis cDNA, c... 62 4e-08
U72682_3(U72682|pid:none) Drosophila virilis alternatively splic... 62 4e-08
S41766(S41766;S43202)heterogeneous nuclear ribonucleoprotein G -... 62 4e-08
AX886322_1(AX886322|pid:none) Sequence 2185 from Patent EP1033401. 62 4e-08
(A5A6M3) RecName: Full=Heterogeneous nuclear ribonucleoprotein G... 62 4e-08
(Q7ZT82) RecName: Full=Fox-1 homolog-like protein 1; AltName: Fu... 62 4e-08
AF031166_1(AF031166|pid:none) Homo sapiens SRp46 splicing factor... 62 4e-08
Z23064_1(Z23064|pid:none) H.sapiens mRNA gene for hnRNP G protein. 62 4e-08
AB170452_1(AB170452|pid:none) Macaca fascicularis brain cDNA clo... 62 4e-08
DQ481667_15(DQ481667|pid:none) Takifugu rubripes HoxCa gene clus... 62 5e-08
BT067913_1(BT067913|pid:none) Zea mays full-length cDNA clone ZM... 62 5e-08
AK070292_1(AK070292|pid:none) Oryza sativa Japonica Group cDNA c... 62 5e-08
BC066454_1(BC066454|pid:none) Danio rerio heterogeneous nuclear ... 62 5e-08
EU961409_1(EU961409|pid:none) Zea mays clone 235210 unknown mRNA. 62 5e-08
CR848724_4(CR848724|pid:none) Zebrafish DNA sequence from clone ... 62 5e-08
FN321810_1(FN321810|pid:none) Schistosoma japonicum isolate Anhu... 62 5e-08
FN357407_24(FN357407|pid:none) Schistosoma mansoni genome sequen... 62 5e-08
BC122383_1(BC122383|pid:none) Danio rerio heterogeneous nuclear ... 62 5e-08
AP005535_14(AP005535|pid:none) Oryza sativa Japonica Group genom... 62 5e-08
(Q14011) RecName: Full=Cold-inducible RNA-binding protein; AltNa... 62 5e-08
AB171494_1(AB171494|pid:none) Macaca fascicularis brain cDNA clo... 62 5e-08
BC102773_1(BC102773|pid:none) Bos taurus cold inducible RNA bind... 62 5e-08
AP008213_1538(AP008213|pid:none) Oryza sativa (japonica cultivar... 62 5e-08
AY815954_1(AY815954|pid:none) Schistosoma japonicum SJCHGC01035 ... 62 5e-08
AB170797_1(AB170797|pid:none) Macaca fascicularis brain cDNA clo... 62 5e-08
FB872168_1(FB872168|pid:none) Sequence 91441 from Patent WO20080... 62 5e-08
AB026847_1(AB026847|pid:none) Ciona intestinalis CiGRP1 mRNA for... 62 5e-08
AB170759_1(AB170759|pid:none) Macaca fascicularis brain cDNA clo... 62 5e-08
CR848724_3(CR848724|pid:none) Zebrafish DNA sequence from clone ... 62 5e-08
D38485_1(D38485|pid:none) Triticum aestivum mRNA for Ps16 protei... 62 5e-08
FM992688_16(FM992688|pid:none) Candida dubliniensis CD36 chromos... 62 5e-08
EF082940_1(EF082940|pid:none) Picea sitchensis clone WS02726_E04... 62 5e-08
BT044027_1(BT044027|pid:none) Salmo salar clone HM6_0854 ataxin ... 62 5e-08
CP000267_4159(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 62 6e-08
(Q28521) RecName: Full=Heterogeneous nuclear ribonucleoprotein A... 62 6e-08
(Q642J5) RecName: Full=Fox-1 homolog A; AltName: Full=Ataxin-2-b... 62 6e-08
AJ851483_1(AJ851483|pid:none) Gallus gallus mRNA for hypothetica... 62 6e-08
AJ002894_1(AJ002894|pid:none) Oryza sativa mRNA for glycine rich... 62 6e-08
DQ120650_1(DQ120650|pid:none) Homo sapiens RBM1 gene, partial cds. 62 6e-08
AC084766_7(AC084766|pid:none) Oryza sativa chromosome 3 BAC OSJN... 62 6e-08
AB462999_1(AB462999|pid:none) Synthetic construct DNA, clone: pF... 62 6e-08
CR762263_1(CR762263|pid:none) Xenopus tropicalis finished cDNA, ... 62 6e-08
DQ120651_1(DQ120651|pid:none) Pan troglodytes RBM1 gene, partial... 62 6e-08
AK293617_1(AK293617|pid:none) Homo sapiens cDNA FLJ56884 complet... 61 8e-08
AJ237847_1(AJ237847|pid:none) Mus musculus mRNA for heterogeneou... 61 8e-08
(A6NFN3) RecName: Full=Fox-1 homolog C; 61 8e-08
(P60824) RecName: Full=Cold-inducible RNA-binding protein; AltNa... 61 8e-08
EU959070_1(EU959070|pid:none) Zea mays clone 210066 hypothetical... 61 8e-08
CP000542_149(CP000542|pid:none) Verminephrobacter eiseniae EF01-... 61 8e-08
AB171862_1(AB171862|pid:none) Macaca fascicularis brain cDNA clo... 61 8e-08
AJ237846_1(AJ237846|pid:none) Mus musculus mRNA for heterogeneou... 61 8e-08
BT056479_1(BT056479|pid:none) Salmo salar clone ssal-evf-523-094... 61 8e-08
FB912189_1(FB912189|pid:none) Sequence 131462 from Patent WO2008... 61 8e-08
BC044442_1(BC044442|pid:none) Danio rerio heterogeneous nuclear ... 61 8e-08
AY070612_1(AY070612|pid:none) Drosophila melanogaster RE71384 fu... 61 8e-08
AE014297_3585(AE014297|pid:none) Drosophila melanogaster chromos... 61 8e-08
AK293905_1(AK293905|pid:none) Homo sapiens cDNA FLJ58356 complet... 61 8e-08
D89678_1(D89678|pid:none) Homo sapiens mRNA for A+U-rich element... 61 8e-08
AE014297_3588(AE014297|pid:none) Drosophila melanogaster chromos... 61 8e-08
AB025351_1(AB025351|pid:none) Rana catesbeiana mRNA for BFCIRP, ... 61 8e-08
FN392320_99(FN392320|pid:none) Pichia pastoris GS115 chromosome ... 61 8e-08
BC157911_1(BC157911|pid:none) Mus musculus predicted gene, EG545... 61 8e-08
AF533016_1(AF533016|pid:none) Salmo salar hyperosmotic glycine r... 61 1e-07
AK133860_1(AK133860|pid:none) Mus musculus 8 days embryo whole b... 61 1e-07
BT045277_1(BT045277|pid:none) Salmo salar clone ssal-rgf-517-087... 61 1e-07
CR954203_239(CR954203|pid:none) Ostreococcus tauri strain OTTH05... 61 1e-07
BT057160_1(BT057160|pid:none) Salmo salar clone ssal-evf-545-119... 61 1e-07
BT057118_1(BT057118|pid:none) Salmo salar clone ssal-rgb2-592-00... 61 1e-07
(O35479) RecName: Full=Heterogeneous nuclear ribonucleoprotein G... 61 1e-07
(P84586) RecName: Full=Heterogeneous nuclear ribonucleoprotein G... 61 1e-07
AM451268_1(AM451268|pid:none) Vitis vinifera contig VV78X095284.... 61 1e-07
AY647162_1(AY647162|pid:none) Equus caballus heterogeneous nucle... 61 1e-07
EU437408_1(EU437408|pid:none) Ceratitis capitata transformer 2 (... 61 1e-07
D31715_1(D31715|pid:none) Arabidopsis thaliana gene for RNA-bind... 61 1e-07
AL772404_2(AL772404|pid:none) Mouse DNA sequence from clone RP23... 61 1e-07
AK220979_1(AK220979|pid:none) Arabidopsis thaliana mRNA for euka... 61 1e-07
FB872162_1(FB872162|pid:none) Sequence 91435 from Patent WO20080... 61 1e-07
AF291712_1(AF291712|pid:none) Arabidopsis thaliana initiation fa... 61 1e-07
CR858270_1(CR858270|pid:none) Pongo abelii mRNA; cDNA DKFZp469I0... 61 1e-07
AF463524_1(AF463524|pid:none) Mus musculus ribonucleoprotein het... 61 1e-07
CP000492_1229(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 61 1e-07
BT058500_1(BT058500|pid:none) Salmo salar clone Contig1416 Heter... 61 1e-07
BT044019_1(BT044019|pid:none) Salmo salar clone HM5_1035 hyperos... 61 1e-07
BT049685_1(BT049685|pid:none) Salmo salar clone ssal-rgb2-559-08... 61 1e-07
AK293125_1(AK293125|pid:none) Homo sapiens cDNA FLJ52659 complet... 61 1e-07
BT048518_1(BT048518|pid:none) Salmo salar clone ssal-evf-501-381... 61 1e-07
AF279289_1(AF279289|pid:none) Homo sapiens testes-specific heter... 61 1e-07
DQ235162_1(DQ235162|pid:none) Solanum tuberosum clone 153C04 unk... 61 1e-07
(Q01130) RecName: Full=Splicing factor, arginine/serine-rich 2; ... 60 1e-07
AE014296_1940(AE014296|pid:none) Drosophila melanogaster chromos... 60 1e-07
AB092510_1(AB092510|pid:none) Bombyx mori mRNA for TIA-1 homolog... 60 1e-07
BT086379_1(BT086379|pid:none) Zea mays full-length cDNA clone ZM... 60 1e-07
BT039077_1(BT039077|pid:none) Zea mays full-length cDNA clone ZM... 60 1e-07
EU973819_1(EU973819|pid:none) Zea mays clone 418501 splicing fac... 60 1e-07
BT035887_1(BT035887|pid:none) Zea mays full-length cDNA clone ZM... 60 1e-07
BT056110_1(BT056110|pid:none) Zea mays full-length cDNA clone ZM... 60 1e-07
AJ320241_1(AJ320241|pid:none) Polytomella sp. 'Pringsheim 198.80... 60 1e-07
DQ311218_1(DQ311218|pid:none) Bombyx mori Sr protein mRNA, compl... 60 1e-07
AJ821840_1(AJ821840|pid:none) Guillardia theta partial mRNA for ... 60 1e-07
BC046045_1(BC046045|pid:none) Danio rerio splicing factor, argin... 60 1e-07
(Q7ZX83) RecName: Full=Heterogeneous nuclear ribonucleoprotein D... 60 1e-07
(Q5R1W5) RecName: Full=Splicing factor, arginine/serine-rich 2; ... 60 1e-07
(Q06A98) RecName: Full=Splicing factor, arginine/serine-rich 2; ... 60 1e-07
AF069682_1(AF069682|pid:none) Homo sapiens testes specific heter... 60 1e-07
EU955477_1(EU955477|pid:none) Zea mays clone 1533996 unknown mRNA. 60 1e-07
BC004945_1(BC004945|pid:none) Homo sapiens, clone IMAGE:3615335,... 60 1e-07
L13037_1(L13037|pid:none) Drosophila melanogaster nucleolytic po... 60 1e-07
FB872172_1(FB872172|pid:none) Sequence 91445 from Patent WO20080... 60 1e-07
AE014296_1941(AE014296|pid:none) Drosophila melanogaster chromos... 60 1e-07
EF147516_1(EF147516|pid:none) Populus trichocarpa clone WS0123_B... 60 1e-07
BT043372_1(BT043372|pid:none) Zea mays full-length cDNA clone ZM... 60 1e-07
AK304470_1(AK304470|pid:none) Homo sapiens cDNA FLJ52850 complet... 60 1e-07
BT073963_1(BT073963|pid:none) Oncorhynchus mykiss clone omyk-evo... 60 1e-07
EU954539_1(EU954539|pid:none) Zea mays clone 1469740 glycine-ric... 60 1e-07
AE014296_1944(AE014296|pid:none) Drosophila melanogaster chromos... 60 1e-07
AB041639_1(AB041639|pid:none) Bombyx mori EN86 mRNA for TIA-1 li... 60 1e-07
X98511_1(X98511|pid:none) M.musculus PR264 gene. 60 1e-07
AK292271_1(AK292271|pid:none) Homo sapiens cDNA FLJ76931 complet... 60 1e-07
AC103551_5(AC103551|pid:none) Oryza sativa chromosome 3 BAC OSJN... 60 1e-07
EU955970_1(EU955970|pid:none) Zea mays clone 1554524 glycine-ric... 60 1e-07
AJ249323_1(AJ249323|pid:none) Ciona intestinalis mRNA for glycin... 60 1e-07
AE014296_1943(AE014296|pid:none) Drosophila melanogaster chromos... 60 1e-07
AF288041_1(AF288041|pid:none) Oryzias latipes splicing factor ar... 60 2e-07
BT026301_1(BT026301|pid:none) Bos taurus RNA binding motif prote... 60 2e-07
BT025441_1(BT025441|pid:none) Bos taurus ataxin 2-binding protei... 60 2e-07
AM746676_1878(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 60 2e-07
DQ778625_1(DQ778625|pid:none) Homo sapiens unknown mRNA. 60 2e-07
AB208826_1(AB208826|pid:none) Homo sapiens mRNA for ataxin 2-bin... 60 2e-07
AF448859_1(AF448859|pid:none) Homo sapiens ataxin 2-binding prot... 60 2e-07
DQ630738_1(DQ630738|pid:none) Astatotilapia burtoni heterogeneou... 60 2e-07
AX885129_1(AX885129|pid:none) Sequence 992 from Patent EP1033401. 60 2e-07
AK077594_1(AK077594|pid:none) Mus musculus 8 days embryo whole b... 60 2e-07
CP000492_2580(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 60 2e-07
AK005907_1(AK005907|pid:none) Mus musculus adult male testis cDN... 60 2e-07
CP000096_86(CP000096|pid:none) Pelodictyon luteolum DSM 273, com... 60 2e-07
AF109106_1(AF109106|pid:none) Homo sapiens hexaribonucleotide bi... 60 2e-07
BT039258_1(BT039258|pid:none) Zea mays full-length cDNA clone ZM... 60 2e-07
AF315811_1(AF315811|pid:none) Triticum aestivum RNA-binding prot... 60 2e-07
FN314364_1(FN314364|pid:none) Schistosoma japonicum isolate Anhu... 60 2e-07
AB041596_1(AB041596|pid:none) Mus musculus fox-1 mRNA for RNA-bi... 60 2e-07
AL049748_5(AL049748|pid:none) Human DNA sequence from clone RP1-... 60 2e-07
(Q640A2) RecName: Full=Heterogeneous nuclear ribonucleoprotein D... 60 2e-07
DQ017388_1(DQ017388|pid:none) Mus musculus RNA binding protein 9... 60 2e-07
D26182_1(D26182|pid:none) Nicotiana sylvestris mRNA for RNA-bind... 60 2e-07
BT083094_1(BT083094|pid:none) Anoplopoma fimbria clone afim-evh-... 60 2e-07
AY659955_1(AY659955|pid:none) Mus musculus ataxin-2 binding prot... 60 2e-07
CR857485_1(CR857485|pid:none) Pongo abelii mRNA; cDNA DKFZp459B1... 60 2e-07
AL713700_1(AL713700|pid:none) Homo sapiens mRNA; cDNA DKFZp547L0... 60 2e-07
AY904025_1(AY904025|pid:none) Mus musculus RNA binding motif pro... 60 2e-07
AY960684_1(AY960684|pid:none) Homo sapiens RNA binding motif pro... 60 2e-07
EF083658_1(EF083658|pid:none) Picea sitchensis clone WS0286_I17 ... 60 2e-07
AF109120_1(AF109120|pid:none) Homo sapiens hexaribonucleotide bi... 60 2e-07
AC150977_20(AC150977|pid:none) Medicago truncatula clone mth2-32... 60 2e-07
AK098209_1(AK098209|pid:none) Homo sapiens cDNA FLJ40890 fis, cl... 60 2e-07
EU559167_101(EU559167|pid:none) Candidatus Nitrospira defluvii C... 60 2e-07
AF229055_1(AF229055|pid:none) Mus musculus hexaribonucleotide bi... 60 2e-07
AF107203_1(AF107203|pid:none) Homo sapiens ataxin 2-binding prot... 60 2e-07
AK055213_1(AK055213|pid:none) Homo sapiens cDNA FLJ30651 fis, cl... 60 2e-07
DQ296176_1(DQ296176|pid:none) Brassica rapa clone 34 unknown mRNA. 60 2e-07
AL049748_4(AL049748|pid:none) Human DNA sequence from clone RP1-... 60 2e-07
AY659956_1(AY659956|pid:none) Mus musculus ataxin-2 binding prot... 60 2e-07
(Q95KI0) RecName: Full=Fox-1 homolog A; AltName: Full=Ataxin-2-b... 60 2e-07
(A6QPR6) RecName: Full=RNA-binding protein 9; AltName: Full=RNA-... 60 2e-07
AK297813_1(AK297813|pid:none) Homo sapiens cDNA FLJ52570 complet... 60 2e-07
AF229058_1(AF229058|pid:none) Homo sapiens hexaribonucleotide bi... 60 2e-07
AM270033_26(AM270033|pid:none) Aspergillus niger contig An02c039... 60 2e-07
BT052587_1(BT052587|pid:none) Medicago truncatula clone MTYFD_FE... 60 2e-07
AY659957_1(AY659957|pid:none) Mus musculus ataxin-2 binding prot... 60 2e-07
AF191501_1(AF191501|pid:none) Mus musculus hexaribonucleotide bi... 60 2e-07
AM419009_1(AM419009|pid:none) Homo sapiens partial mRNA for RNA ... 60 2e-07
BC149447_1(BC149447|pid:none) Bos taurus RNA binding motif prote... 60 2e-07
(Q99070) RecName: Full=Glycine-rich RNA-binding protein 2; &FB8... 60 2e-07
(A4QUF0) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 60 2e-07
EU969871_1(EU969871|pid:none) Zea mays clone 336682 glycine-rich... 60 2e-07
EF148773_1(EF148773|pid:none) Populus trichocarpa x Populus delt... 60 2e-07
AY626066_4(AY626066|pid:none) Bombyx mori transformer-2 protein ... 60 2e-07
AP007151_1217(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 60 2e-07
FB872176_1(FB872176|pid:none) Sequence 91449 from Patent WO20080... 60 2e-07
BC066672_1(BC066672|pid:none) Danio rerio zgc:77366, mRNA (cDNA ... 60 2e-07
(P10979) RecName: Full=Glycine-rich RNA-binding, abscisic acid-i... 60 2e-07
AY626066_5(AY626066|pid:none) Bombyx mori transformer-2 protein ... 60 2e-07
(Q9TTV2) RecName: Full=Heterogeneous nuclear ribonucleoproteins ... 60 2e-07
AY626066_1(AY626066|pid:none) Bombyx mori transformer-2 protein ... 60 2e-07
AC005896_29(AC005896|pid:none) Arabidopsis thaliana chromosome 2... 60 2e-07
AY626066_6(AY626066|pid:none) Bombyx mori transformer-2 protein ... 60 2e-07
AJ544899_1(AJ544899|pid:none) Tetraodon nigroviridis partial hnR... 60 2e-07
BT087787_1(BT087787|pid:none) Zea mays full-length cDNA clone ZM... 60 2e-07
DQ100253_1(DQ100253|pid:none) Bactrocera oleae transformer-2 mal... 60 2e-07
AF310215_1(AF310215|pid:none) Sorghum bicolor glycine-rich RNA-b... 60 2e-07
AY626066_2(AY626066|pid:none) Bombyx mori transformer-2 protein ... 60 2e-07
AY062455_1(AY062455|pid:none) Arabidopsis thaliana ubiquitin / r... 60 2e-07
AE013599_2019(AE013599|pid:none) Drosophila melanogaster chromos... 59 3e-07
(Q9SVM8) RecName: Full=Glycine-rich RNA-binding protein 2, mitoc... 59 3e-07
AF406651_1(AF406651|pid:none) Mus musculus heterogeneous nuclear... 59 3e-07
AB006818_1(AB006818|pid:none) Rattus norvegicus hnRNP mRNA for h... 59 3e-07
BC126219_1(BC126219|pid:none) Homo sapiens scaffold attachment f... 59 3e-07
(Q5R452) RecName: Full=Scaffold attachment factor B1; S... 59 3e-07
BX323559_6(BX323559|pid:none) Zebrafish DNA sequence from clone ... 59 3e-07
(P19018) RecName: Full=Transformer-2 sex-determining protein; &... 59 3e-07
(Q2HJ60) RecName: Full=Heterogeneous nuclear ribonucleoproteins ... 59 3e-07
AK294671_1(AK294671|pid:none) Homo sapiens cDNA FLJ54744 complet... 59 3e-07
BC143938_1(BC143938|pid:none) Homo sapiens scaffold attachment f... 59 3e-07
AK304687_1(AK304687|pid:none) Homo sapiens cDNA FLJ58832 complet... 59 3e-07
BX323559_10(BX323559|pid:none) Zebrafish DNA sequence from clone... 59 3e-07
S31443(S31443) glycine-rich RNA-binding protein (clone A81) - Ar... 59 3e-07
AK289429_1(AK289429|pid:none) Homo sapiens cDNA FLJ75945 complet... 59 3e-07
(A7VJC2) RecName: Full=Heterogeneous nuclear ribonucleoproteins ... 59 3e-07
EU971223_1(EU971223|pid:none) Zea mays clone 359846 glycine-rich... 59 3e-07
AB006817_1(AB006817|pid:none) Rattus norvegicus hnRNP mRNA for h... 59 3e-07
L43631_1(L43631|pid:none) Homo sapiens scaffold attachment facto... 59 3e-07
(P22626) RecName: Full=Heterogeneous nuclear ribonucleoproteins ... 59 3e-07
A96762(A96762) probable RNA-binding glycine-rich protein T9L24.4... 59 3e-07
BC143939_1(BC143939|pid:none) Homo sapiens scaffold attachment f... 59 3e-07
(O88569) RecName: Full=Heterogeneous nuclear ribonucleoproteins ... 59 3e-07
AB208780_1(AB208780|pid:none) Homo sapiens mRNA for scaffold att... 59 3e-07
BX323559_5(BX323559|pid:none) Zebrafish DNA sequence from clone ... 59 3e-07
(P19683) RecName: Full=31 kDa ribonucleoprotein, chloroplastic; ... 59 3e-07
BT036700_1(BT036700|pid:none) Zea mays full-length cDNA clone ZM... 59 3e-07
(Q5RBU8) RecName: Full=Heterogeneous nuclear ribonucleoproteins ... 59 3e-07
CP000552_1549(CP000552|pid:none) Prochlorococcus marinus str. MI... 59 4e-07
>JC7299(JC7299)transformer-2-like protein - liverwort (Marchantia
polymorpha)
Length = 244
Score = 98.6 bits (244), Expect = 5e-19
Identities = 46/95 (48%), Positives = 66/95 (69%)
Frame = +2
Query: 374 NNGNTLHVSNLNPRTRESDLRDTFASIGKVIDCTILLDPNTKESRGFGFVTYSSGDEAQD 553
N GN L+V+ L+ R E DL + F+ GKV++C ++LDP T+ESRGFGFVT + A+
Sbjct: 87 NPGNNLYVTGLSTRVNEKDLEEHFSREGKVLECRLVLDPRTRESRGFGFVTMEHLEGAER 146
Query: 554 AIQRLDSTKIDGNTIRVEKSKRSKARDPTPGFYMG 658
I+ L+ + ++G I VEK+KR +AR PTPG Y+G
Sbjct: 147 CIKYLNRSTLEGRMITVEKAKRKRARTPTPGEYLG 181
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,452,163,567
Number of extensions: 27877647
Number of successful extensions: 59598
Number of sequences better than 10.0: 3124
Number of HSP's gapped: 59250
Number of HSP's successfully gapped: 4203
Length of query: 462
Length of database: 1,040,966,779
Length adjustment: 132
Effective length of query: 330
Effective length of database: 618,001,159
Effective search space: 203940382470
Effective search space used: 203940382470
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
1 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
1 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
1 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |