Contig-U01759-1
Contig ID Contig-U01759-1
Contig update 2001. 8.29
Contig sequence
>Contig-U01759-1 (Contig-U01759-1Q) /CSM_Contig/Contig-U01759-1Q.Seq.d
TTAATAATTTCAGTGGTTTAGATTGTACTCATTTTGATGGTAATGTTGAA
TGGTTAAATGGTATCCCATTATGTCAAATTCCCCAATAATTTAATTTAAT
TTATTTTTAACTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAATAAAAAAAAAAAAAAAAAAAAAAAAGAAAAA

Gap no gap
Contig length 185
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 3138977
End point 3139162
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U01759
List of clone(s)

est1=SSG726Z,1,186
Translated Amino Acid sequence
NNFSGLDCTHFDGNVEWLNGIPLCQIPQ*fnliyf*llkkkkkkkkkkkknkkkkkkkke
k


Translated Amino Acid sequence (All Frames)
Frame A:
liisvv*ivlilmvmlng*mvshyvkfpnnli*fifnf*kkkkkkkkkkkkikkkkkkkk
k


Frame B:
**fqwfrlysf*w*c*mvkwypimsnspii*fnlfltfkkkkkkkkkkkkk*kkkkkkkr
k


Frame C:
NNFSGLDCTHFDGNVEWLNGIPLCQIPQ*fnliyf*llkkkkkkkkkkkknkkkkkkkke
k


own update 2004. 6. 7
Homology vs CSM-cDNA
Query= Contig-U01759-1 (Contig-U01759-1Q)
/CSM_Contig/Contig-U01759-1Q.Seq.d
(185 letters)

Database: CSM
8361 sequences; 7,895,291 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U01759-1 (Contig-U01759-1Q) /CSM_Contig/Conti... 228 2e-60
Contig-U05414-1 (Contig-U05414-1Q) /CSM_Contig/Conti... 44 7e-05
Contig-U14738-1 (Contig-U14738-1Q) /CSM_Contig/Conti... 42 3e-04
Contig-U13315-1 (Contig-U13315-1Q) /CSM_Contig/Conti... 42 3e-04
Contig-U10959-1 (Contig-U10959-1Q) /CSM_Contig/Conti... 42 3e-04
Contig-U14177-1 (Contig-U14177-1Q) /CSM_Contig/Conti... 40 0.001
Contig-U06929-1 (Contig-U06929-1Q) /CSM_Contig/Conti... 40 0.001
Contig-U14371-1 (Contig-U14371-1Q) /CSM_Contig/Conti... 38 0.004
Contig-U13985-1 (Contig-U13985-1Q) /CSM_Contig/Conti... 38 0.004
Contig-U12896-1 (Contig-U12896-1Q) /CSM_Contig/Conti... 38 0.004

>Contig-U01759-1 (Contig-U01759-1Q) /CSM_Contig/Contig-U01759-1Q.Seq.d
Length = 185

Score = 228 bits (115), Expect = 2e-60
Identities = 115/115 (100%)
Strand = Plus / Plus


Query: 1 ttaataatttcagtggtttagattgtactcattttgatggtaatgttgaatggttaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaataatttcagtggtttagattgtactcattttgatggtaatgttgaatggttaaatg 60


Query: 61 gtatcccattatgtcaaattccccaataatttaatttaatttatttttaactttt 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtatcccattatgtcaaattccccaataatttaatttaatttatttttaactttt 115


>Contig-U05414-1 (Contig-U05414-1Q) /CSM_Contig/Contig-U05414-1Q.Seq.d
Length = 973

Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Minus


Query: 89 atttaatttaatttatttttaa 110
||||||||||||||||||||||
Sbjct: 892 atttaatttaatttatttttaa 871


>Contig-U14738-1 (Contig-U14738-1Q) /CSM_Contig/Contig-U14738-1Q.Seq.d
Length = 618

Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus


Query: 86 ataatttaatttaatttattt 106
|||||||||||||||||||||
Sbjct: 437 ataatttaatttaatttattt 417


Score = 32.2 bits (16), Expect = 0.27
Identities = 19/20 (95%)
Strand = Plus / Minus


Query: 89 atttaatttaatttattttt 108
||||||||||||||| ||||
Sbjct: 420 atttaatttaatttaatttt 401


Score = 32.2 bits (16), Expect = 0.27
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 87 taatttaatttaattt 102
||||||||||||||||
Sbjct: 417 taatttaatttaattt 402


Database: CSM
Posted date: Jun 7, 2004 8:33 AM
Number of letters in database: 7,895,291
Number of sequences in database: 8361

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5844
Number of Sequences: 8361
Number of extensions: 5844
Number of successful extensions: 2413
Number of sequences better than 10.0: 414
length of query: 185
length of database: 7,895,291
effective HSP length: 15
effective length of query: 170
effective length of database: 7,769,876
effective search space: 1320878920
effective search space used: 1320878920
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 5. 6
Homology vs DNA
Query= Contig-U01759-1 (Contig-U01759-1Q) /CSM_Contig/Contig-U01759-1Q.Seq.d
(185 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(C84834) Dictyostelium discoideum slug cDNA, clone SSG726. 228 5e-56 1
(AY392439) Dictyostelium discoideum P-selectin gene, complet... 194 8e-46 1
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 194 8e-46 1
(EI898903) VUH2-22D4TV VUUBBa (VUH2) Vigna unguiculata genom... 48 4e-04 2
(AC091633) Homo sapiens 3 BAC RP11-506F8 (Roswell Park Cance... 42 0.003 3
(AC069213) Homo sapiens 3 BAC RP11-338O10 (Roswell Park Canc... 42 0.004 3
(BX510661) Human DNA sequence from clone RP13-766B11 on chro... 52 0.007 1
(CU571083) Zebrafish DNA sequence from clone CH73-70K4 in li... 50 0.028 1
(AL935180) Zebrafish DNA sequence from clone CH211-227I1. 50 0.028 1
(AC226728) Solanum lycopersicum chromosome 6 clone C06HBa019... 50 0.028 1
(AC215650) Populus trichocarpa clone POP108-K22, complete se... 50 0.028 1
(AC208369) Populus trichocarpa clone JGIACSB21-H15, complete... 50 0.028 1
(AC126782) Medicago truncatula clone mth2-14p11, complete se... 50 0.028 1
(AC162538) Bos taurus clone CH240-120E16, WORKING DRAFT SEQU... 50 0.028 1
(AC157076) Bos taurus clone CH240-62L22, WORKING DRAFT SEQUE... 50 0.028 1
(CU896576) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.028 1
(AC219291) Bos taurus clone CH240-335L20, WORKING DRAFT SEQU... 50 0.028 1
(CE733908) tigr-gss-dog-17000330269277 Dog Library Canis lup... 50 0.028 1
(AP007362) Lotus japonicus genomic DNA, chromosome 2, clone:... 34 0.069 2
(AP004542) Lotus japonicus genomic DNA, chromosome 2, clone:... 34 0.071 2
(CT025911) Zebrafish DNA sequence from clone CH211-234K10 in... 48 0.11 1
(CR762436) Zebrafish DNA sequence from clone DKEY-261M9. 48 0.11 1
(CR759780) Zebrafish DNA sequence from clone DKEY-269P14 in ... 48 0.11 1
(AL929543) Zebrafish DNA sequence from clone CH211-166M10 in... 48 0.11 1
(AL928945) Zebrafish DNA sequence from clone BUSM1-203G9 in ... 48 0.11 1
(AL831730) Zebrafish DNA sequence from clone DKEY-76A17 in l... 48 0.11 1
(AL606528) Mouse DNA sequence from clone RP23-45H23 on chrom... 48 0.11 1
(AC024914) Mus musculus BAC Clone 262c6 RPCI-23, complete se... 48 0.11 1
(CU137658) Medicago truncatula chromosome 5 clone mth2-54e16... 48 0.11 1
(AM460476) Vitis vinifera contig VV78X063991.7, whole genome... 48 0.11 1
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 48 0.11 1
(AC015631) Homo sapiens, clone RP11-45L5, complete sequence. 48 0.11 1
(AC162517) Bos taurus clone CH240-26B24, *** SEQUENCING IN P... 48 0.11 1
(AC160974) Mus musculus chromosome 13 clone RP24-73F19, WORK... 48 0.11 1
(AC147857) Macropus eugenii clone ME_KBa-175L17, WORKING DRA... 48 0.11 1
(FP236630) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.11 1
(BX004986) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.11 1
(AL844506) Plasmodium falciparum chromosome 7. 48 0.11 1
(AC231263) Pongo abelii chromosome 1 clone CH276-91O13, WORK... 48 0.11 1
(DU971857) 381802 Tomato MboI BAC Library Solanum lycopersic... 48 0.11 1
(DU422116) 1098421127358 CHORI-243 Ovis aries genomic clone ... 48 0.11 1
(CW951276) TcB36.3_H05_SP6 Tribolium BAC library Tribolium c... 48 0.11 1
(EL500905) 048_PFLAB1-S-PLATE7B.AB1 Blood stage Plasmodium f... 48 0.11 1
(EB631401) AGENCOURT_54979120 D. mojavensis EST Drosophila m... 48 0.11 1
(DV750044) ID0AAH3BF06ZM1 ID0AAH Acyrthosiphon pisum cDNA cl... 48 0.11 1
(DN574471) 90198529 Sea Urchin primary mesenchyme cell cDNA ... 48 0.11 1
(DC545586) Bombyx mori cDNA, clone:E_FL_phe-_03K18_F_0, 5' e... 48 0.11 1
(GC698366) Sequence 13611 from patent US 6812339. 46 0.11 2
(GC697515) Sequence 12760 from patent US 6812339. 46 0.11 2
(AM463778) Vitis vinifera contig VV78X156197.5, whole genome... 42 0.12 2
(BD299093) Cloning, expression and characterization of the S... 46 0.12 2
(AX093471) Sequence 1 from Patent WO0118198. 46 0.12 2
(AR701989) Sequence 1 from patent US 6924126. 46 0.12 2
(AJ246003) Homo sapiens Spast gene for spastin protein. 46 0.12 2
(BX936433) Zebrafish DNA sequence from clone DKEY-117A16 in ... 44 0.22 3
(AC136814) Rattus norvegicus clone CH230-179I17, *** SEQUENC... 34 0.25 2
(AL606906) Mouse DNA sequence from clone RP23-121J14 on chro... 32 0.25 2
(CU928555) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 0.25 2
(CR846102) Zebrafish DNA sequence from clone DKEY-50I13 in l... 34 0.25 2
(AC127934) Rattus norvegicus clone CH230-328O6, WORKING DRAF... 34 0.25 2
(AM424402) Vitis vinifera contig VV78X079762.40, whole genom... 34 0.26 2
(AM433704) Vitis vinifera contig VV78X016195.1, whole genome... 36 0.31 2
(DU707646) Bst040173 lambda03 Boechera stricta genomic clone... 36 0.32 2
(DU681287) Bst013823 lambda03 Boechera stricta genomic clone... 36 0.32 2
(EI899091) VUH2-20F10TV VUUBBa (VUH2) Vigna unguiculata geno... 38 0.32 2
(DE585131) Bombyx mori genomic DNA, Fosmid clone:GBMFno236_j... 36 0.32 2
(BX119314) Zebrafish DNA sequence from clone DKEY-18H19 in l... 34 0.36 4
(CU694224) Zebrafish DNA sequence from clone CH211-135I4 in ... 46 0.43 1
(CU074421) Zebrafish DNA sequence from clone DKEY-172O7 in l... 46 0.43 1
(CT009487) Zebrafish DNA sequence from clone CH211-198I6 in ... 46 0.43 1
(CR354553) Zebrafish DNA sequence from clone CH211-158N6 in ... 46 0.43 1
(BX897748) Zebrafish DNA sequence from clone CH211-152M4 in ... 46 0.43 1
(BX663610) Zebrafish DNA sequence from clone DKEYP-114A6 in ... 46 0.43 1
(BX548035) Zebrafish DNA sequence from clone CH211-190F24 in... 46 0.43 1
(BX546485) Zebrafish DNA sequence from clone RP71-39A17 in l... 46 0.43 1
(BX469893) Zebrafish DNA sequence from clone DKEY-252H13 in ... 46 0.43 1
(BX321877) Zebrafish DNA sequence from clone DKEYP-27B10 in ... 46 0.43 1
(BX005271) Zebrafish DNA sequence from clone CH211-145F15 in... 46 0.43 1
(AL929019) Zebrafish DNA sequence from clone CH211-149L13. 46 0.43 1
(AL929016) Zebrafish DNA sequence from clone DKEY-24J9 in li... 46 0.43 1
(AC162896) Mus musculus chromosome 5, clone RP24-318J14, com... 46 0.43 1
(AC158139) Mus musculus chromosome 1, clone RP23-431H7, comp... 46 0.43 1
(AC139039) Mus musculus chromosome 16, clone RP23-300H4, com... 46 0.43 1
(AC136018) Mus musculus BAC clone RP24-125E6 from chromosome... 46 0.43 1
(AC129981) Mus musculus chromosome 5, clone RP23-114I13, com... 46 0.43 1
(AC121304) Mus musculus chromosome 3, clone RP24-63C3, compl... 46 0.43 1
(AC114645) Mus musculus chromosome 9, clone RP24-131G14, com... 46 0.43 1
(AC110040) Mus musculus chromosome 3, clone RP23-276J3, comp... 46 0.43 1
(AC109166) Mus musculus chromosome 7, clone RP23-310P1, comp... 46 0.43 1
(AC204080) Rhesus Macaque BAC CH250-427N15 () complete sequ... 46 0.43 1
(CU633871) Podospora anserina genomic DNA chromosome 5, supe... 46 0.43 1
(CU633455) Podospora anserina genomic DNA chromosome 4, supe... 46 0.43 1
(CU329670) Schizosaccharomyces pombe chromosome I. 46 0.43 1
(AY448013) Ipomoea trifida haplotype S1 self-incompatibility... 46 0.43 1
(AM480362) Vitis vinifera contig VV78X143096.6, whole genome... 46 0.43 1
(AM467648) Vitis vinifera contig VV78X144981.7, whole genome... 46 0.43 1
(AM456688) Vitis vinifera contig VV78X105167.5, whole genome... 46 0.43 1
(AM444769) Vitis vinifera contig VV78X049205.5, whole genome... 46 0.43 1
(AM435484) Vitis vinifera contig VV78X259621.13, whole genom... 46 0.43 1
(AB263748) Ipomoea trifida DNA, self-incompatibility (S-) lo... 46 0.43 1
(CS604447) Sequence 3433 from Patent WO2007039234. 46 0.43 1
(CS602799) Sequence 1785 from Patent WO2007039234. 46 0.43 1
(GC748898) Sequence 64143 from patent US 6812339. 46 0.43 1
(GC748897) Sequence 64142 from patent US 6812339. 46 0.43 1
(GC722639) Sequence 37884 from patent US 6812339. 46 0.43 1
(GC722638) Sequence 37883 from patent US 6812339. 46 0.43 1
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s... 46 0.43 1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 46 0.43 1
(AC084660) Caenorhabditis briggsae cosmid G46N08, complete s... 46 0.43 1
(AP003679) Homo sapiens genomic DNA, chromosome 11q clone:RP... 46 0.43 1
(AL590618) Human DNA sequence from clone RP13-36C9 on chromo... 46 0.43 1
(AL512430) Human DNA sequence from clone RP11-346C16 on chro... 46 0.43 1
(AL121658) BAC sequence from the SPG4 candidate region at 2p... 46 0.43 1
(AC134678) Homo sapiens chromosome 15, clone RP13-199M12, co... 46 0.43 1
(AC152845) Otolemur garnettii clone CH256-542F4, WORKING DRA... 46 0.43 1
(AC148886) Otolemur garnettii clone CH256-249N7, WORKING DRA... 46 0.43 1
(AC147957) Dasypus novemcinctus clone VMRC5-331O22, WORKING ... 46 0.43 1
(AC142534) Homo sapiens chromosome 16 clone RP11-1042O3, WOR... 46 0.43 1
(AC125700) Rattus norvegicus clone CH230-12K11, *** SEQUENCI... 46 0.43 1
(AC123007) Rattus norvegicus clone CH230-37C11, *** SEQUENCI... 46 0.43 1
(AC112008) Rattus norvegicus clone CH230-236B13, WORKING DRA... 46 0.43 1
(AC108637) Rattus norvegicus clone CH230-276G19, *** SEQUENC... 46 0.43 1
(AC100408) Mus musculus clone RP23-134O9, LOW-PASS SEQUENCE ... 46 0.43 1
(AC095597) Rattus norvegicus clone CH230-8M2, *** SEQUENCING... 46 0.43 1
(AC095548) Rattus norvegicus clone CH230-8M16, *** SEQUENCIN... 46 0.43 1
(FP236161) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.43 1
(FP102781) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.43 1
(CU929679) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 0.43 1
(CU929318) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.43 1
(CU896627) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 46 0.43 1
(CU856642) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 0.43 1
(CU694587) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 0.43 1
(AC073180) Homo sapiens chromosome 2 clone RP13-486M11, WORK... 46 0.43 1
(AC053515) Homo sapiens chromosome 11 clone RP11-423C22, WOR... 46 0.43 1
(CU207320) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 0.43 1
(CU062649) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.43 1
(CU062523) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 0.43 1
(CT956070) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.43 1
(CT737120) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.43 1
(CR936344) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 46 0.43 1
(AC211900) Pongo abelii chromosome UNKNOWN clone CH276-409I1... 46 0.43 1
(AC183697) Otolemur garnettii clone CH256-481K21, WORKING DR... 46 0.43 1
(AC170726) Atelerix albiventris clone LB4-469K23, WORKING DR... 46 0.43 1
(AC170716) Atelerix albiventris clone LB4-332H6, WORKING DRA... 46 0.43 1
(AC170710) Atelerix albiventris clone LB4-23B2, WORKING DRAF... 46 0.43 1
(AC170056) Atelerix albiventris clone LB4-130K1, WORKING DRA... 46 0.43 1
(AC021135) Homo sapiens chromosome X clone RP11-405J13, WORK... 46 0.43 1
(AC011232) Homo sapiens chromosome 2 clone RP11-78E13, WORKI... 46 0.43 1
(FI248130) CccaBb021-G2JF CccABb Cajanus cajan genomic clone... 46 0.43 1
(FI184635) MUGQ_CH252P025N16Sp6_GL381_004 CHORI-252 Vervet M... 46 0.43 1
(FH744053) CHO_OF5171xa06r1.ab1 CHO_OF5 Nicotiana tabacum ge... 46 0.43 1
(FH743989) CHO_OF5171xa06f1.ab1 CHO_OF5 Nicotiana tabacum ge... 46 0.43 1
(ET078269) QM0AAB6BF01RM2 CCER1 Citrus clementina genomic cl... 46 0.43 1
(EK212414) 1095460103328 Global-Ocean-Sampling_GS-31-01-01-1... 46 0.43 1
(AL984241) Danio rerio genomic clone DKEY-44G8, genomic surv... 46 0.43 1
(DX462844) Cpl04601 Papaya Genomic DNA BAC Library Carica pa... 46 0.43 1
(DU840698) MUGQ_CH252P017D02Sp6_GL313_013 CHORI-252 Vervet M... 46 0.43 1
(CZ506289) GMW2-29M19a.g1 GMW2 Glycine max genomic, genomic ... 46 0.43 1
(CU964562) Brassica napus GSS, clone JBnB046L24, end read, p... 46 0.43 1
(CT299949) Sus scrofa genomic clone CH242-209D13, genomic su... 46 0.43 1
(CE581242) tigr-gss-dog-17000366262427 Dog Library Canis lup... 46 0.43 1
(CE321090) tigr-gss-dog-17000360484066 Dog Library Canis lup... 46 0.43 1
(CC085122) CSU-K33r.41K19.T7 CSU-K33r Aedes aegypti genomic ... 46 0.43 1
(BZ449405) BONAN25TF BO_1.6_2_KB_tot Brassica oleracea genom... 46 0.43 1
(BZ435388) BONMW90TF BO_1.6_2_KB_tot Brassica oleracea genom... 46 0.43 1
(BH936121) ode99a06.g1 B.oleracea002 Brassica oleracea genom... 46 0.43 1
(BH741373) gt32b09.g1 BoBuds01 Brassica oleracea genomic clo... 46 0.43 1
(BH722864) BOHVI32TF BO_2_3_KB Brassica oleracea genomic clo... 46 0.43 1
(BH718120) BOMFH92TR BO_2_3_KB Brassica oleracea genomic clo... 46 0.43 1
(ES411302) HTAB-aaa39c11.b2 Heterorhabditis_bacteriophora_HT... 46 0.43 1
(AM730628) Cucumis melo subsp. melo EST, clone CI_02-C04-M13R. 46 0.43 1
(CT620696) Danio rerio EST, clone ZF_mu_53f22 3'. 46 0.43 1
(CT620695) Danio rerio EST, clone ZF_mu_53f22 5'. 46 0.43 1
(BU570643) AGENCOURT_10405586 NIH_MGC_82 Homo sapiens cDNA c... 46 0.43 1
(GE462699) 294753674 Nasonia vitripennis Adult Female Nasoni... 46 0.43 1
(GE426451) 294516727 Nasonia vitripennis Adult Male Nasonia ... 46 0.43 1
(AC148346) Medicago truncatula clone mth2-25m19, complete se... 40 0.50 2
(DQ538565) Hyposoter exiguae isolate 2 16S ribosomal RNA gen... 38 0.53 2
(DQ538564) Hyposoter exiguae isolate 1 16S ribosomal RNA gen... 38 0.53 2
(AC011719) Homo sapiens chromosome 11 clone RP11-3J8 map 11,... 42 0.68 2
(AC148475) Homo sapiens clone YB35, *** SEQUENCING IN PROGRE... 36 0.72 3
(AM465061) Vitis vinifera contig VV78X276140.5, whole genome... 38 0.87 4
(EI864864) CAH1-26A15TR CAA1Ba Cicer arietinum genomic clone... 36 0.88 2
(CR354591) Zebrafish DNA sequence from clone DKEY-18L4 in li... 36 0.90 2
(AC182277) Bos taurus clone CH240-510F16, WORKING DRAFT SEQU... 32 0.90 2
(CU406336) Zebrafish DNA sequence from clone DKEY-83F6. 32 0.91 2
(AP009037) Bombyx mori genomic DNA, chromosome U, BAC clone:... 34 0.92 2
(AP009026) Bombyx mori genomic DNA, chromosome 25, BAC clone... 34 0.93 2
(AM453575) Vitis vinifera contig VV78X085999.19, whole genom... 36 0.97 2
(CT009557) Pan troglodytes chromosome X clone PTB-010G23 map... 44 1.1 3
(DU697587) Bst030117 lambda03 Boechera stricta genomic clone... 34 1.2 2
(EK233919) 1095460191793 Global-Ocean-Sampling_GS-31-01-01-1... 32 1.2 2
(EI899274) VUH2-23G13TV VUUBBa (VUH2) Vigna unguiculata geno... 36 1.2 2
(EK411593) 1095505199242 Global-Ocean-Sampling_GS-31-01-01-1... 32 1.2 2
(CZ534866) SRAA-aac93g05.g1 Strongyloides ratti whole genome... 32 1.2 2
(EV429708) 210791694 NVP Nasonia vitripennis cDNA clone 194I... 36 1.2 2
(DE457811) Bombyx mori genomic DNA, Fosmid clone:GBMFno52_o0... 34 1.2 2
(CT591426) Danio rerio EST, clone ZF_mu_17f11 5'. 34 1.3 2
(AF003626) Homo sapiens chromosome X clone ICRFXc104-M0525, ... 44 1.3 2
(CR936463) Zebrafish DNA sequence from clone DKEY-205H13 in ... 34 1.4 4
(DN807471) 73911358 Sea Urchin primary mesenchyme cell cDNA ... 40 1.5 2
(AC232804) Monodelphis domestica clone VMRC18-846D17, WORKIN... 44 1.6 3
(DQ386647) Astatotilapia burtoni clone BAC 20D21 platelet-de... 44 1.7 1
(CU928081) Zebrafish DNA sequence from clone CH73-7A20 in li... 44 1.7 1
(CU682361) Zebrafish DNA sequence from clone CH1073-475E17. 44 1.7 1
(CU634020) Zebrafish DNA sequence from clone CH73-109E11 in ... 44 1.7 1
(CU633781) Zebrafish DNA sequence from clone CH1073-92F7 in ... 44 1.7 1
(CU467939) Zebrafish DNA sequence from clone CH211-133L8 in ... 44 1.7 1
(CU179656) Zebrafish DNA sequence from clone CH211-204J14. 44 1.7 1
(CT971501) Zebrafish DNA sequence from clone CH73-347O21 in ... 44 1.7 1
(CT030718) Zebrafish DNA sequence from clone DKEYP-12H3 in l... 44 1.7 1
(CT025695) Zebrafish DNA sequence from clone CH211-246B8 in ... 44 1.7 1
(CR936370) Zebrafish DNA sequence from clone CH211-237H13 in... 44 1.7 1
(CR936337) Zebrafish DNA sequence from clone RP71-78K5 in li... 44 1.7 1
(CR931797) Zebrafish DNA sequence from clone CH211-87D5 in l... 44 1.7 1
(CR762485) Zebrafish DNA sequence from clone DKEY-269K12 in ... 44 1.7 1
(CR751564) Zebrafish DNA sequence from clone DKEY-21M21 in l... 44 1.7 1
(CR450728) Zebrafish DNA sequence from clone DKEY-204K18 in ... 44 1.7 1
(CR407561) Zebrafish DNA sequence from clone CH211-244L7 in ... 44 1.7 1
(CR405705) Zebrafish DNA sequence from clone DKEY-64E13 in l... 44 1.7 1
(CR387989) Zebrafish DNA sequence from clone DKEY-101P2 in l... 44 1.7 1
(CR381585) Zebrafish DNA sequence from clone DKEY-27P7 in li... 44 1.7 1
(BX957260) Zebrafish DNA sequence from clone DKEY-1N7 in lin... 44 1.7 1
(BX950189) Zebrafish DNA sequence from clone CH211-155P8 in ... 44 1.7 1
(BX897660) Zebrafish DNA sequence from clone DKEY-102A15 in ... 44 1.7 1
(BX649481) Zebrafish DNA sequence from clone CH211-103D13 in... 44 1.7 1
(BX649439) Zebrafish DNA sequence from clone DKEY-21A8 in li... 44 1.7 1
(BX649350) Zebrafish DNA sequence from clone CH211-161F1 in ... 44 1.7 1
(BX640406) Zebrafish DNA sequence from clone DKEY-187A3 in l... 44 1.7 1
(BX571943) Zebrafish DNA sequence from clone DKEY-159C24 in ... 44 1.7 1
(BX511138) Zebrafish DNA sequence from clone DKEYP-52D3 in l... 44 1.7 1
(BX511069) Zebrafish DNA sequence from clone CH211-207I1 in ... 44 1.7 1
(BX469886) Zebrafish DNA sequence from clone CH211-127D20 in... 44 1.7 1
(BX465192) Zebrafish DNA sequence from clone CH211-202P4 in ... 44 1.7 1
(BX323807) Zebrafish DNA sequence from clone DKEY-154P10 in ... 44 1.7 1
(BX323561) Zebrafish DNA sequence from clone DKEYP-113G3. 44 1.7 1
(BX294095) Zebrafish DNA sequence from clone CH211-248L17 in... 44 1.7 1
(BX247875) Zebrafish DNA sequence from clone CH211-201N18 in... 44 1.7 1
(BX004819) Zebrafish DNA sequence from clone CH211-208B16 in... 44 1.7 1
(AL974310) Zebrafish DNA sequence from clone DKEY-14J6. 44 1.7 1
(AL929292) Zebrafish DNA sequence from clone DKEY-11L24 in l... 44 1.7 1
(AL928936) Zebrafish DNA sequence from clone CH211-133H2 in ... 44 1.7 1
(AL928808) Zebrafish DNA sequence from clone DKEY-265H18 in ... 44 1.7 1
(AL672088) Zebrafish DNA sequence from clone BUSM1-153O2 Con... 44 1.7 1
(AC197815) Gallus gallus BAC clone TAM32-27K9 from chromosom... 44 1.7 1
(AC183980) Gallus gallus BAC clone CH261-97P7 from chromosom... 44 1.7 1
(BV962464) pRRL2:Newb:20080411:342724 USMARC Pig Breed SNP D... 44 1.7 1
(BV435865) S237P6110FC2.T0 PortugueseWaterDog Canis familiar... 44 1.7 1
(BV366509) S231P6280RG5.T0 BedlingtonTerrier Canis familiari... 44 1.7 1
(AL009499) H.sapiens flow-sorted chromosome 1 HindIII fragme... 44 1.7 1
(CT010426) Mouse DNA sequence from clone RP23-17A17 on chrom... 44 1.7 1
(AL845432) Mouse DNA sequence from clone RP23-332H19 on chro... 44 1.7 1
(AL833792) Mouse DNA sequence from clone RP23-97B23 on chrom... 44 1.7 1
(AL672147) Mouse DNA sequence from clone RP23-434N14 on chro... 44 1.7 1
(AL583892) Mouse DNA sequence from clone RP23-32G7 on chromo... 44 1.7 1
(AC157995) Mus musculus BAC clone RP24-364K9 from chromosome... 44 1.7 1
(AC154286) Mus musculus BAC clone RP24-476G22 from 17, compl... 44 1.7 1
(AC131748) Mus musculus BAC clone RP23-42A17 from 12, comple... 44 1.7 1
(AC128571) Rattus norvegicus 6 BAC CH230-424O13 (Children's ... 44 1.7 1
(AC118608) Mus musculus chromosome 17, clone RP23-478J10, co... 44 1.7 1
(AC116577) Mus musculus BAC clone RP23-264N13 from chromosom... 44 1.7 1
(CU468127) Pan troglodytes chromosome X clone RP43-45I17 map... 44 1.7 1
(CT737395) Pan troglodytes chromosome X clone CH251-63F10 ma... 44 1.7 1
(AC215265) Nomascus leucogenys BAC clone CH271-4H12 from chr... 44 1.7 1
(AC210373) Pongo abelii BAC clone CH276-521E8 from chromosom... 44 1.7 1
(AC207083) Pongo abelii BAC clone CH276-459F20 from chromoso... 44 1.7 1
(AC200153) Pongo abelii BAC clone CH276-468K22 from chromoso... 44 1.7 1
(AC196937) Pan troglodytes BAC clone CH251-674N9 from chromo... 44 1.7 1
(AC186387) Pan troglodytes BAC clone CH251-675G18 from chrom... 44 1.7 1
(AC183686) Pan troglodytes BAC clone CH251-209O13 from chrom... 44 1.7 1
(FM992694) Candida dubliniensis CD36 chromosome 7, complete ... 44 1.7 1
(AY851549) Postelsia palmaeformis ribulose-1,5-bisphosphate ... 44 1.7 1
(AY459344) Oryza sativa (japonica cultivar-group) clone CL03... 44 1.7 1
(AY022210) Oryza sativa microsatellite MRG4535 containing (T... 44 1.7 1
(AY022194) Oryza sativa microsatellite MRG4519 containing (T... 44 1.7 1
(AP008215) Oryza sativa (japonica cultivar-group) genomic DN... 44 1.7 1
(AP008207) Oryza sativa (japonica cultivar-group) genomic DN... 44 1.7 1
(AP003248) Oryza sativa Japonica Group genomic DNA, chromoso... 44 1.7 1
(AM489243) Vitis vinifera contig VV78X190127.28, whole genom... 44 1.7 1
(AM486156) Vitis vinifera contig VV78X097379.4, whole genome... 44 1.7 1
(AM475807) Vitis vinifera contig VV78X009165.3, whole genome... 44 1.7 1
(AM475770) Vitis vinifera, whole genome shotgun sequence, co... 44 1.7 1
(AM470649) Vitis vinifera contig VV78X256178.7, whole genome... 44 1.7 1
(AM469597) Vitis vinifera contig VV78X275837.7, whole genome... 44 1.7 1
(AM467465) Vitis vinifera contig VV78X197065.2, whole genome... 44 1.7 1
(AM466064) Vitis vinifera contig VV78X042425.6, whole genome... 44 1.7 1
(AM462675) Vitis vinifera contig VV78X130750.3, whole genome... 44 1.7 1
(AM460700) Vitis vinifera contig VV78X028340.15, whole genom... 44 1.7 1
(AM458860) Vitis vinifera contig VV78X091906.6, whole genome... 44 1.7 1
(AM458034) Vitis vinifera, whole genome shotgun sequence, co... 44 1.7 1
(AM457818) Vitis vinifera contig VV78X000502.3, whole genome... 44 1.7 1
(AM448275) Vitis vinifera contig VV78X097513.3, whole genome... 44 1.7 1
(AM446778) Vitis vinifera contig VV78X057839.2, whole genome... 44 1.7 1
(AM439307) Vitis vinifera contig VV78X051802.4, whole genome... 44 1.7 1
(AM438439) Vitis vinifera contig VV78X009165.6, whole genome... 44 1.7 1
(AM436998) Vitis vinifera contig VV78X098497.33, whole genom... 44 1.7 1
(AM434059) Vitis vinifera contig VV78X073654.6, whole genome... 44 1.7 1
(AM431236) Vitis vinifera contig VV78X194749.1, whole genome... 44 1.7 1
(AM428660) Vitis vinifera contig VV78X090962.9, whole genome... 44 1.7 1
(AM428625) Vitis vinifera contig VV78X048623.11, whole genom... 44 1.7 1
(AM426254) Vitis vinifera contig VV78X111506.4, whole genome... 44 1.7 1
(AM423966) Vitis vinifera contig VV78X038794.12, whole genom... 44 1.7 1
(AJ535063) Oryza sativa Japonica Group mdr9 gene for MDR-lik... 44 1.7 1
(AF318995) Postelsia palmaeformis ribulose-1,5-bisphosphate ... 44 1.7 1
(AC226813) Oryza minuta clone OM__Ba0111A10, complete sequence. 44 1.7 1
(AC217032) Populus trichocarpa clone POP013-C12, complete se... 44 1.7 1
(AC182576) Mimulus guttatus clone MGBa-89I12, complete seque... 44 1.7 1
(AC169076) Medicago truncatula chromosome 7 BAC clone mth2-1... 44 1.7 1
(AC149389) Phakopsora pachyrhizi clone JGIAFNA-5B15, complet... 44 1.7 1
(EA690692) Sequence 69571 from patent US 7365185. 44 1.7 1
(EA687898) Sequence 66777 from patent US 7365185. 44 1.7 1
(EA652807) Sequence 31686 from patent US 7365185. 44 1.7 1
(EA427567) Sequence 18 from patent US 7332281. 44 1.7 1
(DL007586) NOVEL THERAPEUTIC TARGETS IN CANCER. 44 1.7 1
(CS741851) Sequence 9847 from Patent WO2005083127. 44 1.7 1
(CS374530) Sequence 633 from Patent WO2006034879. 44 1.7 1
(CS374258) Sequence 361 from Patent WO2006034879. 44 1.7 1
(A48910) Sequence 1 from Patent WO9605312. 44 1.7 1
(AX647597) Sequence 1789 from Patent EP1270724. 44 1.7 1
(AX346637) Sequence 1708 from Patent WO0200928. 44 1.7 1
(GN008949) Sequence 1390 from Patent EP2014669. 44 1.7 1
(GN008943) Sequence 1384 from Patent EP2014669. 44 1.7 1
(GC698502) Sequence 13747 from patent US 6812339. 44 1.7 1
(AR706413) Sequence 1 from patent US 6933110. 44 1.7 1
(AR539494) Sequence 4056 from patent US 6737248. 44 1.7 1
(AR538729) Sequence 3291 from patent US 6737248. 44 1.7 1
(AR535540) Sequence 102 from patent US 6737248. 44 1.7 1
(AR357938) Sequence 4056 from patent US 6593114. 44 1.7 1
(AR357173) Sequence 3291 from patent US 6593114. 44 1.7 1
(AR353984) Sequence 102 from patent US 6593114. 44 1.7 1
(AR212737) Sequence 1 from patent US 6403103. 44 1.7 1
(AR162947) Sequence 1 from patent US 6270767. 44 1.7 1
(AR047920) Sequence 1 from patent US 5820864. 44 1.7 1
(CT826393) Pig DNA sequence from clone CH242-246E17 on chrom... 44 1.7 1
(CT797454) Pig DNA sequence from clone CH242-173D7 on chromo... 44 1.7 1
(AC184823) Canis Familiaris chromosome 8, clone XX-20B16, co... 44 1.7 1
(U40797) Caenorhabditis elegans cosmid C28C12, complete sequ... 44 1.7 1
(U24190) Trypanosoma cruzi Tc40 antigen (Tc40) mRNA, complet... 44 1.7 1
(M33861) Dictyostelium discoideum spore germination-specific... 44 1.7 1
(AC202221) Acyrthosiphon pisum BAC VMRC38-20-A1 (Benaroya R... 44 1.7 1
(AB019549) Drosophila borealis gene for Glycerol-3-phosphate... 44 1.7 1
(BX284929) Human DNA sequence from clone RP11-681N21 on chro... 44 1.7 1
(AL590138) Human DNA sequence from clone RP11-243A2 on chrom... 44 1.7 1
(AL583809) Human chromosome 14 DNA sequence BAC R-736L22 of ... 44 1.7 1
(AL512599) Human DNA sequence from clone RP11-115D7 on chrom... 44 1.7 1
(AL445383) Human chromosome 14 DNA sequence BAC R-88E18 of l... 44 1.7 1
(AL356316) Human DNA sequence from clone RP11-172I24 on chro... 44 1.7 1
(AL355296) Human DNA sequence from clone RP11-510H23 on chro... 44 1.7 1
(AL161629) Human DNA sequence from clone RP11-406A20 on chro... 44 1.7 1
(AL133245) BAC sequence from the SPG4 candidate region at 2p... 44 1.7 1
(AL132838) Human chromosome 14 DNA sequence BAC R-85G20 of l... 44 1.7 1
(AL132819) Human chromosome 14 DNA sequence BAC C-2200A16 of... 44 1.7 1
(AL109767) Human chromosome 14 DNA sequence BAC R-889B13 of ... 44 1.7 1
(AL049869) Human chromosome 14 DNA sequence BAC R-973N13 of ... 44 1.7 1
(AJ009612) Homo sapiens chromosome 17 sequence from PAC 77H1... 44 1.7 1
(AF274857) Homo sapiens chromosome X clone CTD-2011N23 map q... 44 1.7 1
(AC127540) Homo sapiens chromosome 17, clone RP1-77H15, comp... 44 1.7 1
(AC127533) Homo sapiens chromosome 15, clone RP11-1363O20, c... 44 1.7 1
(AC126603) Homo sapiens chromosome 15, clone RP11-492D6, com... 44 1.7 1
(AC108171) Homo sapiens chromosome X clone RP11-468J11, RP11... 44 1.7 1
(AC106868) Homo sapiens BAC clone RP11-174E22 from 4, comple... 44 1.7 1
(AC104785) Homo sapiens BAC clone RP11-84C13 from 4, complet... 44 1.7 1
(AC096543) Homo sapiens chromosome 1 clone RP11-335E6, compl... 44 1.7 1
(AC093786) Homo sapiens BAC clone RP11-213A7 from 4, complet... 44 1.7 1
(AC093671) Homo sapiens BAC clone RP11-542P2 from 4, complet... 44 1.7 1
(AC093484) Homo sapiens chromosome , clone RP11-138I1, compl... 44 1.7 1
(AC092383) Homo sapiens chromosome 16 clone RP11-787D11, com... 44 1.7 1
(AC091549) Homo sapiens chromosome 8, clone RP11-343D20, com... 44 1.7 1
(AC087713) Homo sapiens chromosome 8, clone RP11-731D15, com... 44 1.7 1
(AC080023) Homo sapiens chromosome 11, clone RP11-351I24, co... 44 1.7 1
(AC068919) Homo sapiens BAC clone RP11-340I19 from 2, comple... 44 1.7 1
(AC055855) Homo sapiens chromosome 15, clone RP11-352G18, co... 44 1.7 1
(AC022534) Homo sapiens chromosome 10 clone RP11-316G7, comp... 44 1.7 1
(AC022276) Homo sapiens 12 BAC RP11-161A14 (Roswell Park Can... 44 1.7 1
(AC021443) Homo sapiens chromosome 11, clone RP11-692M12, co... 44 1.7 1
(AC020983) Homo sapiens chromosome 7 clone RP11-269N18, comp... 44 1.7 1
(AC018663) Human Chromosome 7 clone RP11-288A3, complete seq... 44 1.7 1
(AC018557) Homo sapiens chromosome 16 clone RP11-63M22, comp... 44 1.7 1
(AC015700) Homo sapiens chromosome 11, clone RP11-168C2, com... 44 1.7 1
(AC009101) Homo sapiens chromosome 16 clone RP11-439I14, com... 44 1.7 1
(AC008395) Homo sapiens chromosome 19 clone CTC-244M17, comp... 44 1.7 1
(AC006571) Homo sapiens, clone hRPK.23_A_1, complete sequence. 44 1.7 1
(AC005924) Homo sapiens Chr.14 PAC RPCI4-794B2 (Roswell Park... 44 1.7 1
(AC162732) Loxodonta africana clone VMRC15-180G16, WORKING D... 44 1.7 1
(AC161340) Rhinolophus ferrumequinum clone VMRC7-51B22, WORK... 44 1.7 1
(AC156704) Bos taurus clone CH240-57A19, WORKING DRAFT SEQUE... 44 1.7 1
(AC154084) Dasypus novemcinctus clone VMRC5-516O22, WORKING ... 44 1.7 1
(AC153736) Otolemur garnettii clone CH256-152M16, WORKING DR... 44 1.7 1
(AC150868) Bos taurus clone CH240-278D12, WORKING DRAFT SEQU... 44 1.7 1
(AC150827) Callithrix jacchus clone CH259-410C3, WORKING DRA... 44 1.7 1
(AC150589) Bos taurus clone CH240-116M23, WORKING DRAFT SEQU... 44 1.7 1
(AC150294) Callithrix jacchus clone CH259-356M4, WORKING DRA... 44 1.7 1
(AC150291) Callithrix jacchus clone CH259-222L5, WORKING DRA... 44 1.7 1
(AC149046) Papio anubis clone RP41-152D17, WORKING DRAFT SEQ... 44 1.7 1
(AC149014) Papio anubis clone RP41-257D21, WORKING DRAFT SEQ... 44 1.7 1
(AC148782) Otolemur garnettii clone CH256-193O17, WORKING DR... 44 1.7 1
(AC148043) Chlorocebus aethiops clone CH252-342C20, WORKING ... 44 1.7 1
(AC147952) Papio anubis clone RP41-96M13, WORKING DRAFT SEQU... 44 1.7 1
(AC145318) Homo sapiens chromosome 16 clone RP11-1419K13, WO... 44 1.7 1
(AC145311) Homo sapiens chromosome 16 clone RP11-1397I6, WOR... 44 1.7 1
(AC143322) Homo sapiens chromosome 16 clone RP11-704M10, WOR... 44 1.7 1
(AC142540) Homo sapiens chromosome 16 clone RP11-697E17, WOR... 44 1.7 1
(AC141592) Homo sapiens chromosome 16 clone RP11-107J10, WOR... 44 1.7 1
(AC141450) Homo sapiens chromosome 16 clone RP11-379H23, WOR... 44 1.7 1
(AC141449) Homo sapiens chromosome 16 clone RP11-338N22, WOR... 44 1.7 1
(AC141316) Homo sapiens chromosome 16 clone RP11-959D23, WOR... 44 1.7 1
(AC141301) Homo sapiens chromosome 16 clone RP11-717D19, WOR... 44 1.7 1
(AC141071) Homo sapiens chromosome 16 clone RP11-204M11, WOR... 44 1.7 1
(AC140868) Homo sapiens chromosome 16 clone RP11-112K3, WORK... 44 1.7 1
(AC140867) Homo sapiens chromosome 16 clone RP11-1111E22, WO... 44 1.7 1
(AC140084) Chlorocebus aethiops clone CH252-13H17, WORKING D... 44 1.7 1
(AC136438) Homo sapiens chromosome 16 clone RP11-357P4, WORK... 44 1.7 1
(AC135704) Rattus norvegicus clone CH230-486B10, WORKING DRA... 44 1.7 1
(AC133812) Rattus norvegicus clone CH230-166D17, *** SEQUENC... 44 1.7 1
(AC133069) Macaca mulatta clone CH250-15G12, WORKING DRAFT S... 44 1.7 1
(AC130391) Rattus norvegicus clone CH230-4L5, WORKING DRAFT ... 44 1.7 1
(AC128328) Rattus norvegicus clone CH230-213E6, WORKING DRAF... 44 1.7 1
(AC128250) Rattus norvegicus clone CH230-524A1, *** SEQUENCI... 44 1.7 1
(AC126385) Homo sapiens chromosome 17 clone CTD-2187B18 map ... 44 1.7 1
(AC116661) Mus musculus chromosome UNK clone RP23-116O1, WOR... 44 1.7 1
(AC111580) Rattus norvegicus clone CH230-72O8, WORKING DRAFT... 44 1.7 1
(AC110624) Rattus norvegicus clone CH230-223G5, *** SEQUENCI... 44 1.7 1
(AC109591) Homo sapiens chromosome 4 clone RP11-739K5, WORKI... 44 1.7 1
(AC109095) Rattus norvegicus clone CH230-221E22, *** SEQUENC... 44 1.7 1
(AC108757) Oryza sativa Japonica Group chromosome 9 clone OS... 44 1.7 1
(AC106496) Rattus norvegicus clone CH230-185C22, *** SEQUENC... 44 1.7 1
(AC106395) Rattus norvegicus clone CH230-139C23, *** SEQUENC... 44 1.7 1
(AC106387) Rattus norvegicus clone CH230-136N2, *** SEQUENCI... 44 1.7 1
(AC104085) Homo sapiens chromosome 4 clone RP11-607E8, WORKI... 44 1.7 1
(AC103516) Rattus norvegicus clone CH230-114A6, WORKING DRAF... 44 1.7 1
(AC097931) Rattus norvegicus clone CH230-64G12, WORKING DRAF... 44 1.7 1
(AC096176) Rattus norvegicus clone CH230-11D3, WORKING DRAFT... 44 1.7 1
(FP236133) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(FP102633) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(FP102463) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 1.7 1
(FP089702) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(FP085609) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(FP085608) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(FP085561) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(FP085437) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(FP085430) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(FP085403) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(FP085362) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(FP074892) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(FP074888) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(FP074883) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 1.7 1
(FP017219) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(FP017139) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(CU984598) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(CU984584) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 1.7 1
(CU929819) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(CU929659) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(CU928894) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(CU915531) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(CU740091) Brassica rapa subsp. pekinensis clone KBrH102F14,... 44 1.7 1
(CU695320) Brassica rapa subsp. pekinensis clone KBrH105I15,... 44 1.7 1
(CU694244) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(CU694211) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(CU683885) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(CU640431) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 1.7 1
(CU640368) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(CU633353) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(CU633231) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(CU582901) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(CU582894) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(AC090556) Homo sapiens chromosome 11 clone CTD-2011A8 map 1... 44 1.7 1
(AC084192) Homo sapiens chromosome 15 clone RP11-231O17 map ... 44 1.7 1
(AC073501) Homo sapiens chromosome 19 clone RP11-617J17, WOR... 44 1.7 1
(AC055833) Homo sapiens chromosome 4 clone RP11-84C13 map 4,... 44 1.7 1
(AC037448) Homo sapiens chromosome 14 clone RP11-671J2 map 1... 44 1.7 1
(AC026144) Homo sapiens chromosome 4 clone RP11-106H1 map 4,... 44 1.7 1
(CU468488) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(CU464130) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 44 1.7 1
(CU457724) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(CU457426) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(CT737336) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 1
(CT583713) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 1.7 1
(CT572992) Mouse DNA sequence *** SEQUENCING CANCELLED *** f... 44 1.7 1
(CT027684) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 1.7 1
(CT010513) Mouse DNA sequence *** SEQUENCING CANCELLED *** f... 44 1.7 1
(CR940348) Theileria annulata genomic DNA chromosome 2. 44 1.7 1
(CR940347) Theileria annulata genomic DNA chromosome 1 part 1. 44 1.7 1
(CR932060) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 44 1.7 1
(CR790379) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 1.7 1
(CR753903) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 1.7 1
(BX649244) Mouse DNA sequence *** SEQUENCING IN PROGRESS ***... 44 1.7 1
(AP007623) Lotus japonicus genomic DNA, chromosome 4, clone:... 44 1.7 1
(AL929223) Mouse DNA sequence *** SEQUENCING CANCELLED *** f... 44 1.7 1
(AL354677) Human DNA sequence *** SEQUENCING CANCELLED *** f... 44 1.7 1
(AL157376) Human DNA sequence *** SEQUENCING CANCELLED *** f... 44 1.7 1
(AC233010) Choloepus hoffmanni clone CH281-269K18, WORKING D... 44 1.7 1
(AC232933) Heliconius erato clone BBAM-18A1, WORKING DRAFT S... 44 1.7 1
(AC232652) Mustela putorius furo clone CH237-3K19, WORKING D... 44 1.7 1
(AC231899) Choloepus hoffmanni clone CH281-209L15, WORKING D... 44 1.7 1
(AC230401) Bos taurus clone CH240-510C21, WORKING DRAFT SEQU... 44 1.7 1
(AC226810) Oryza minuta clone OM__Ba0084G22, *** SEQUENCING ... 44 1.7 1
(AC226404) Gallus gallus chromosome Z clone CH261-116D11, WO... 44 1.7 1
(AC225666) Tupaia belangeri clone CH275-233E17, WORKING DRAF... 44 1.7 1
(AC225430) Papio anubis clone RP41-145O9, WORKING DRAFT SEQU... 44 1.7 1
(AC225324) Heliconius erato clone BBAM-15B24, WORKING DRAFT ... 44 1.7 1

>(C84834) Dictyostelium discoideum slug cDNA, clone SSG726.
Length = 186

Score = 228 bits (115), Expect = 5e-56
Identities = 115/115 (100%)
Strand = Plus / Plus


Query: 1 ttaataatttcagtggtttagattgtactcattttgatggtaatgttgaatggttaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaataatttcagtggtttagattgtactcattttgatggtaatgttgaatggttaaatg 60


Query: 61 gtatcccattatgtcaaattccccaataatttaatttaatttatttttaactttt 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtatcccattatgtcaaattccccaataatttaatttaatttatttttaactttt 115

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 187,840,748
Number of extensions: 14821331
Number of successful extensions: 5048356
Number of sequences better than 10.0: 1745
Length of query: 185
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 162
Effective length of database: 99,442,330,388
Effective search space: 16109657522856
Effective search space used: 16109657522856
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 7.18
Homology vs Protein
Query= Contig-U01759-1 (Contig-U01759-1Q) /CSM_Contig/Contig-U01759-1Q.Seq.d
(185 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

***** No hits found ******

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 175,377,447
Number of extensions: 1808071
Number of successful extensions: 7578
Number of sequences better than 10.0: 0
Number of HSP's gapped: 7578
Number of HSP's successfully gapped: 0
Length of query: 61
Length of database: 1,051,180,864
Length adjustment: 33
Effective length of query: 28
Effective length of database: 944,374,417
Effective search space: 26442483676
Effective search space used: 26442483676
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 26 (14.6 bits)

PSORT

psg: 0.75 gvh: 0.36 alm: 0.57 top: 0.53 tms: 0.00 mit: 0.18 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: cytoplasmic
40.0 %: nuclear
12.0 %: cytoskeletal
8.0 %: mitochondrial

>> prediction for Contig-U01759-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0