Contig-U11332-1
Contig ID Contig-U11332-1
Contig update 2002.12.18
Contig sequence
>Contig-U11332-1 (Contig-U11332-1Q) /CSM_Contig/Contig-U11332-1Q.Seq.d
AATAACAAATACACAACTACACCAGGATATTCAATTAACCACAAACTCAA
ATTCAAATTCGAATAATTCGTCATTAAATAATCATCATCAACAACAACAA
AATATTGTACATACTATACCAATAACAAATTCAATACCACCAGTAAACTC
AATCACTATTTCAATATTAGCAAGCACATTAACCAAATCGATAGTTGTAA
ATTTTCAAATACTAACAGCTACCAATGTTGGTAAAGTATTGAGTATCATT
CAAATTGGTAAGAAACAACGTGAGAATACTAAACAGGGTGCTTGTTTTCA
CCCATTTTATAAATCCTCTGTTTACACATCAAGACCTGGCAAAAGATTAT
GGTTAGCCGATCCAATTGATGGTCGTGTTTTATCGACTATGAATTTCACA
CCATCCTCAACCACAAACGAAGATGGTACTACAAATCCAATACCAAATAT
AATATTGAAACCAAAACCATTAATATCTTCAAATTCATCCAATGATGCAA
ATACTTATCTCACTGGTAAATTCCCAATGATATTCTCAAAGTTATTACCA
TTTGGTAATTACTTAATATCATATGATGAATTATCATTACTCTTAATCGA
TGTTAATGAAGTTGAAGTTTTAGAATGGAAATTAGATACAAATCAAATTC
ATGACTTGGTTGTTTATCATGATTCAATCTATGCATTACATGGTCAAAAT
CATTCTATCTCTAGAATTTTCACTTCAATTCCTTTAGAAATTTTACCAAC
TCCTCAAGAATTACAAGAACAATCTGATCAATTACAAAAACAACAACAAC
AACAACAACAACAACAACAACAACCTGAGGAAATAATAAGTGAACCACAA
TCACAACCACAACCAATAGCAATAGCCTCATTAATTGAGGAAAAGAAAGA
TGAACAATTACAACCAAAGAAATCTGAATCACAAGAGAATTTAACAACTT
TATCAAATAGTGATAATATAATTGGTAGTGAAATTGATAGTACAAATACT
GATAATTCTACATTATCAAGTAGTACAAATTCATTAACTATTGAAGGTAG
TGCAAGTTTGCCATTAGTTAGTGAATCATCAAACCAACAACAACAACAAC
AACAACAACAACAACCTTCATCATTAAAATCATCAACTGATCAATTCGTT
GATGATAAATTATTGGATAGTACAACAACGACAACAGCAGTTGAAACATC
AATTCAAAGAGTAGCATCAAAAGAATGTATTTTCTCAGATATTCCTTTAT
CATCAGAACCATTAATGGTATCAACAAGTGTTAAAGATCCAACTTTAGCT
GCATCAACAACTAGAAAGGTTATAAAGAAAAAGGTTATAAAAACAGCATT
ACCACAGGATCAACAATTAAATGGAACAAATAATACAGCAACTCTATCAA
CTTCACCACCACAATCAATAGTATCATCATCAACAACAGCAACAACAGCA
ACAGCAACATCAACATCAATAGGAGCACCAACAGAAGTCAAAAGAACAGT
TATTGTAAAGAAAAAAATTATTAAAAAAGCAGCGGCATTATCAACTACAA
CTACAACCACACCACAAATCTCATCGCCACCAATTTCAAATCCTACACCA
TCACCACCTTTATATGTAGAAACCGTATCATCATCAACAACAACAACAAC
AACCACACCAGCAGAAGTATCATTATCACCAAAAAAAGAAGAAACTACAA
TAGCACCAACACCAACACCAATACCAACATCAGCAACAACAGTTACAGCT
AATAATATACAACAGGGTATTTTTAAAACATTAAATTCAGCTACATCATC
ATTCTTGGAGATTAAGCAATTTGCATTAAATAAAACAAATGAAATTAAAT
CTGATATTACACATAAAATTTTAGGTCCATCAAGTGGTGATGATATAAAT
TCAAGTAATAATACAAATGTAACATTAAATAATACAACAACAGCAACAGC
AACAGCAACAACAGCAACAACAATAACAGATAATTTAAATACAACAATAG
TAAATGAACAACAATCACAACAACATCCAATTGAAGTTTTAGAGAAATTA
ACCAAACAAACCTATGAATCTTTACAACAATATAAAGAGAATAAGACAAA
AACAACATCATTTGAACCAATGTTACAAATTTGGGTACAATTATTTAATT
CTATCGAA----------AAGAATCAAAGATAATCTCAACCATTTATCAA
TTCATTGATTCTTCAGATTCTTCAACTTGTTTAACATTATTGGATAGTCA
TTGTTCAAATGATTATGGATTATTATTTAGATTCTTAAATCAATTATTAG
AATTGGATCCAATTGAATCTTCAAAATTCTTTGCAAAACATTTCCCAATT
ATATTACCAAGAAATATTTTAAATTTTACAAATTCTTTAATTGAAAACGA
TGATATTATTATTAATAAAAGTAATGATAGTGGTGGTGGTAGTAGAAGTA
ATAAAGAATTAGGTAATTTAATTAAATTTGAATATTTAAATCAATTAATG
AAATTAAAACCAGAATGTAAATTTAATTCACTAGAATTATTAGAACAATG
GTTCCTTTCAAATTTAATGAATAATAAACCAAATCAAAATCAATTATTTG
AAGAAAGAGAAGATATGTCAACAACATCAACAAGAAAATTTATACCAAAA
TTAAAATCAAATTTAATTGAATGGAAATCAAAAGATACTTTAATACAAAT
TATTGATAATGTAATTAATAATGAATATGGTAATGGTAATTTATTGAAAT
CATTGGAATCAATGTCTGCTGAAAATGGTTTTCATATTGGCCTTTATAAA
ATTTATGAACATTATTTCAAAAATGTTTATTCTATGAAATCCATTTTACA
TAATCAAGAACAATTGAATCATTATTCAAAGAAACTCTTGGAATTAACCA
TTTTCACTGATGATAAAAAAGGTTTTTCAAATTGTTTTGAAAAATAGTAC
ATCAATTGAAATTTGGTCAAATACTTTAGAAATTATGAAACAATTAAGAA
TTGATCAACATGAAAATGAAGATCAATCTGGTGAATCAAGTATTACATTT
GAAATTTCAGAATTATTTATATTGGATTTAATTGGTAAAGCAATTGGTCC
ATTGGAAACTATTGAATTGGTTTGCAAATTTTCAGAAATGTTTGAAAAGA
GTAAAATTGAAACTAAATTATTATCAGATTGGATTAAATTTGGAAAATGG
TCGTTGTATGATAGACCAAAGTTATCATATGATATCTTATCACTTTTGGA
TAGTCATTTATGGTTAAAGAAACCCTTGACCATTTCACCTCAATTCTTAA
CTATGATTGGTCCTGAATTGGACCCAACTTTACCAAATAATCCATTCAAA
GAATTCTTTAATAAACTTGGAACTTCAAGTCATGATAGTGGTGATAATAT
CGATTTTAAAATACCTTCATTCTTTGAAGATAATTCACGTAGACATTGGG
GTGTAGAAACTGAATTATCAACTGGTTCTTGTCCAATTTGTACCTTATCT
TTAGCTGAAAATCCTGAATCTTCATTTTTAGGTTCAACACCCGCTACAAT
TATAGTATTCCCAAATTGTGGTCATTCATATCATCATTGTTGTATTGAAG
ATCAAGGTTGTATGTTATGTTTTTCAAAGAGATAAAAAAAAAAAAAAAAA
AAAAAAAA

Gap gap included
Contig length 3648
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 3571051
End point 3574669
Strand (PLUS/MINUS) PLUS
Number of clones 52
Number of EST 66
Link to clone list U11332
List of clone(s)

est1=CHH523F,1,605
est2=SFH356Z,42,570
est3=VFK294F,70,695
est4=VHL309F,447,1046
est5=VFJ386E,471,1490
est6=VHL355Z,562,1105
est7=SHC156F,590,1177
est8=CHQ609F,592,1239
est9=AHI664F,604,1256
est10=AHI845F,605,1254
est11=AHM678Z,628,1119
est12=CHG631Z,729,1304
est13=CHQ829Z,734,1352
est14=AHD713Z,739,1320
est15=CHN340Z,763,1323
est16=VHL260Z,779,1317
est17=CHF244Z,782,1322
est18=CHB145Z,783,1313
est19=AHO893Z,789,1157
est20=AFK416Z,803,1313
est21=AHM569Z,803,1358
est22=VHO208Z,803,1325
est23=CHI287Z,806,1314
est24=CHN655F,807,1290
est25=CHN341Z,812,1323
est26=CHR387Z,815,1300
est27=VHO754Z,815,1339
est28=VHI149Z,822,1309
est29=AHR287Z,826,1301
est30=CHS251Z,826,1335
est31=CHH511Z,828,1298
est32=CHJ375Z,845,1319
est33=VHF262Z,862,1385
est34=VHF180Z,863,1089
est35=VHE739Z,864,1320
est36=CHK680Z,914,1322
est37=VHH169Z,952,1316
est38=AHF529F,967,1617
est39=VHM791Z,978,1498
est40=SHJ625Z,1017,1473
est41=SHK834F,1071,1689
est42=VHL309Z,1078,1667
est43=CHS417F,1109,1726
est44=AHE366Z,1113,1718
est45=SFB828Z,1183,1557
est46=VFK294Z,1196,1634
est47=VHK337Z,1203,1310
est48=VHN386Z,1346,1891
est49=CHG701F,1486,2158
est50=CHH523Z,1741,1936
est51=AHI845Z,2159,2918
est52=VFE776F,2221,2722
est53=CFD191F,2309,2967
est54=AHI664Z,2808,3619
est55=SHK834Z,2843,3577
est56=CHS417Z,2884,3590
est57=AHF529Z,2886,3586
est58=CHQ609Z,2887,3606
est59=CHS203Z,2890,3614
est60=SHC156Z,2890,3585
est61=CHN655Z,2895,3600
est62=CHG701Z,2933,3590
est63=VFE776Z,2990,3585
est64=SLG280Z,3055,3649
est65=CFD191Z,3104,3589
est66=SHH179Z,3160,3477
Translated Amino Acid sequence
ITNTQLHQDIQLTTNSNSNSNNSSLNNHHQQQQNIVHTIPITNSIPPVNSITISILASTL
TKSIVVNFQILTATNVGKVLSIIQIGKKQRENTKQGACFHPFYKSSVYTSRPGKRLWLAD
PIDGRVLSTMNFTPSSTTNEDGTTNPIPNIILKPKPLISSNSSNDANTYLTGKFPMIFSK
LLPFGNYLISYDELSLLLIDVNEVEVLEWKLDTNQIHDLVVYHDSIYALHGQNHSISRIF
TSIPLEILPTPQELQEQSDQLQKQQQQQQQQQQQPEEIISEPQSQPQPIAIASLIEEKKD
EQLQPKKSESQENLTTLSNSDNIIGSEIDSTNTDNSTLSSSTNSLTIEGSASLPLVSESS
NQQQQQQQQQQPSSLKSSTDQFVDDKLLDSTTTTTAVETSIQRVASKECIFSDIPLSSEP
LMVSTSVKDPTLAASTTRKVIKKKVIKTALPQDQQLNGTNNTATLSTSPPQSIVSSSTTA
TTATATSTSIGAPTEVKRTVIVKKKIIKKAAALSTTTTTTPQISSPPISNPTPSPPLYVE
TVSSSTTTTTTTPAEVSLSPKKEETTIAPTPTPIPTSATTVTANNIQQGIFKTLNSATSS
FLEIKQFALNKTNEIKSDITHKILGPSSGDDINSSNNTNVTLNNTTTATATATTATTITD
NLNTTIVNEQQSQQHPIEVLEKLTKQTYESLQQYKENKTKTTSFEPMLQIWVQLFNSIE-
--

---ESKIISTIYQFIDSSDSSTCLTLLDSHCSNDYGLLFRFLNQLLELDPIESSKFFAKH
FPIILPRNILNFTNSLIENDDIIINKSNDSGGGSRSNKELGNLIKFEYLNQLMKLKPECK
FNSLELLEQWFLSNLMNNKPNQNQLFEEREDMSTTSTRKFIPKLKSNLIEWKSKDTLIQI
IDNVINNEYGNGNLLKSLESMSAENGFHIGLYKIYEHYFKNVYSMKSILHNQEQLNHYSK
KLLELTIFTDDKKGFSNCFEK*yin*nlvkyfrnyetikn*st*k*rsiw*ikyyi*nfr
iiyigfnw*snwsigny*iglqifrnv*ke*n*n*iiirld*iwkmvvv**tkvii*yli
tfg*sfmvketldhftsilnydws*igpnftk*siqril**twnfks**w**yrf*ntfi
l*r*ft*tlgcrn*iinwflsnlylifs*ks*ififrfntrynysipklwsfisslly*r
srlyvmffkeikkkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
nnkytttpgysinhklkfkfe*fvik*ssstttkyctyytnnkfnttsklnhyfniskhi
nqidsckfsntnsyqcw*sieyhsnw*ett*ey*tgclfspil*ilclhiktwqkimvsr
sn*wscfidyefhtilnhkrrwyyksntkynietktinifkfiq*ckylshw*ipndilk
vitiw*llnii**iiitlnrc**s*sfrmeiryksns*lgcls*fnlcitwsksfyl*nf
hfnsfrnftnssritrti*sitktttttttttttt*gnnk*ttittttnsnslin*gker
*tittkei*itrefnnfik***ynw**n**yky**fyiik*ykfiny*r*ckfais**ii
kpttttttttttfiikiin*sir***iig*ynndnss*ninskssikrmyflrysfiirt
inginkc*rsnfscinn*kgykekgyknsittgstikwnk*ysnsinftttinsiiinns
nnsnsnininrstnrsqknsyckekny*kssgiinynynhttnliatnfksytittficr
nriiinnnnnnhtsrsiiitkkrrnynstntntntnisnnsys**yttgyf*nikfsyii
ilgd*aicik*nk*n*i*yyt*nfrsikw**ykfk**ykcnik*ynnsnsnsnnsnnnnr
*fkynnsk*ttitttsn*sfreinqtnl*iftti*re*dknnii*tnvtnlgtii*fyr-
--

---knqr*sqpfinslilqilqlv*hywivivqmimdyylds*iny*nwiqlnlqnslqn
isqlyyqeif*ilqil*lktmilllikvmivvvvvevikn*vi*lnlni*in**n*nqnv
nlih*ny*nngsfqi**iinqikinylkkekicqqhqqenlyqn*nqi*lngnqkil*yk
llim*limnmvmviy*nhwnqcllkmvfilafikfmniiskmfil*npfyiiknn*iiiq
rnswn*pfslmikkvfqivlknstsieiwsntleimkqlridqhenedqsgessitfeis
elfildligkaigpletielvckfsemfekskietkllsdwikfgkwslydrpklsydil
slldshlwlkkpltispqfltmigpeldptlpnnpfkeffnklgtsshdsgdnidfkips
ffednsrrhwgvetelstgscpictlslaenpessflgstpatiivfpncghsyhhccie
dqgcmlcfskr*kkkkkkk

Frame B:
ITNTQLHQDIQLTTNSNSNSNNSSLNNHHQQQQNIVHTIPITNSIPPVNSITISILASTL
TKSIVVNFQILTATNVGKVLSIIQIGKKQRENTKQGACFHPFYKSSVYTSRPGKRLWLAD
PIDGRVLSTMNFTPSSTTNEDGTTNPIPNIILKPKPLISSNSSNDANTYLTGKFPMIFSK
LLPFGNYLISYDELSLLLIDVNEVEVLEWKLDTNQIHDLVVYHDSIYALHGQNHSISRIF
TSIPLEILPTPQELQEQSDQLQKQQQQQQQQQQQPEEIISEPQSQPQPIAIASLIEEKKD
EQLQPKKSESQENLTTLSNSDNIIGSEIDSTNTDNSTLSSSTNSLTIEGSASLPLVSESS
NQQQQQQQQQQPSSLKSSTDQFVDDKLLDSTTTTTAVETSIQRVASKECIFSDIPLSSEP
LMVSTSVKDPTLAASTTRKVIKKKVIKTALPQDQQLNGTNNTATLSTSPPQSIVSSSTTA
TTATATSTSIGAPTEVKRTVIVKKKIIKKAAALSTTTTTTPQISSPPISNPTPSPPLYVE
TVSSSTTTTTTTPAEVSLSPKKEETTIAPTPTPIPTSATTVTANNIQQGIFKTLNSATSS
FLEIKQFALNKTNEIKSDITHKILGPSSGDDINSSNNTNVTLNNTTTATATATTATTITD
NLNTTIVNEQQSQQHPIEVLEKLTKQTYESLQQYKENKTKTTSFEPMLQIWVQLFNSIE-
--

---rikdnlnhlsih*ffrffnlfniig*slfk*lwiii*ilksiirigsn*ifkilckt
fpnyitkkyfkfykffn*kr*yyy**k***www**k**rir*fn*i*ifksineiktrm*
i*ftriirtmvpfkfne**tksksii*rkrryvnninkkiytkikikfn*meikryfntn
y**cn***iw*w*fieiiginvc*kwfsywpl*nl*tlfqkclfyeihft*srtieslfk
etlginhfh***krffklf*kivhqlkfgqil*kl*nn*elinmkmkinlvnqvlhlkfq
nylywi*lvkqlvhwkllnwfanfqkclkrvklklnyyqiglnlengrcmidqsyhmisy
hfwiviyg*rnp*pfhlns*l*lvlnwtqlyqiihsknslinlelqvmivviisilkylh
slkiihvdigv*klnyqlvlvqfvpyl*lkilnlhf*vqhplql*ysqivvihiiivvlk
ikvvcyvfqrdkkkkkkkk

Frame C:
*qihnytrifn*pqtqiqiriirh*iiiinnnkilyilyq*qiqyhq*tqslfqy*qah*
pnr*l*ifky*qlpmlvky*vsfklvrnnvrilnrvlvfthfinplfthqdlakdyg*pi
qlmvvfyrl*ishhpqpqtkmvlqiqyqi*y*nqnh*ylqihpmmqilislvnsq*ysqs
yyhlvit*yhmmnyhys*smlmklkf*ngn*iqikfmtwlfimiqsmhymvkiilslefs
lqfl*kfyqllknyknnlinyknnnnnnnnnnnnlrk**vnhnhnhnq*q*ph*lrkrkm
nnynqrnlnhkri*qlyqivii*lvvklivqiliilhyqvvqih*llkvvqvch*lvnhq
tnnnnnnnnnnlhh*nhqlinslminywivqqrqqqlkhqfke*hqknvfsqiflyhqnh
*wyqqvlkiql*lhqqlerl*rkrl*kqhyhrinn*meqiiqqlyqlhhhnq*yhhqqqq
qqqqqhqhq*ehqqkskeqll*rkkllkkqrhyqlqlqphhkshrhqfqilhhhhlym*k
pyhhqqqqqqphqqkyhyhqkkkklq*hqhqhqyqhqqqqlqliiynrvflkh*iqlhhh
swrlsnlh*ikqmklnlilhikf*vhqvvmi*iqviiqm*h*iiqqqqqqqqqqqqq*qi
i*iqq**mnnnhnniqlkf*rn*pnkpmnlynnikrirqkqhhlnqcykfgynylils--
-

---ESKIISTIYQFIDSSDSSTCLTLLDSHCSNDYGLLFRFLNQLLELDPIESSKFFAKH
FPIILPRNILNFTNSLIENDDIIINKSNDSGGGSRSNKELGNLIKFEYLNQLMKLKPECK
FNSLELLEQWFLSNLMNNKPNQNQLFEEREDMSTTSTRKFIPKLKSNLIEWKSKDTLIQI
IDNVINNEYGNGNLLKSLESMSAENGFHIGLYKIYEHYFKNVYSMKSILHNQEQLNHYSK
KLLELTIFTDDKKGFSNCFEK*yin*nlvkyfrnyetikn*st*k*rsiw*ikyyi*nfr
iiyigfnw*snwsigny*iglqifrnv*ke*n*n*iiirld*iwkmvvv**tkvii*yli
tfg*sfmvketldhftsilnydws*igpnftk*siqril**twnfks**w**yrf*ntfi
l*r*ft*tlgcrn*iinwflsnlylifs*ks*ififrfntrynysipklwsfisslly*r
srlyvmffkeikkkkkkkk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11332-1 (Contig-U11332-1Q)
/CSM_Contig/Contig-U11332-1Q.Seq.d
(3658 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11332-1 (Contig-U11332-1Q) /CSM_Contig/Conti... 3180 0.0
Contig-U11988-1 (Contig-U11988-1Q) /CSM_Contig/Conti... 56 3e-07
Contig-U12500-1 (Contig-U12500-1Q) /CSM_Contig/Conti... 52 4e-06
Contig-U11788-1 (Contig-U11788-1Q) /CSM_Contig/Conti... 52 4e-06
Contig-U12177-1 (Contig-U12177-1Q) /CSM_Contig/Conti... 50 2e-05
Contig-U14772-1 (Contig-U14772-1Q) /CSM_Contig/Conti... 48 7e-05
Contig-U12210-1 (Contig-U12210-1Q) /CSM_Contig/Conti... 46 3e-04
Contig-U13529-1 (Contig-U13529-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U13187-1 (Contig-U13187-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U12528-1 (Contig-U12528-1Q) /CSM_Contig/Conti... 44 0.001

>Contig-U11332-1 (Contig-U11332-1Q) /CSM_Contig/Contig-U11332-1Q.Seq.d
Length = 3658

Score = 3180 bits (1604), Expect = 0.0
Identities = 1634/1634 (100%)
Strand = Plus / Plus


Query: 2000 gtaaatgaacaacaatcacaacaacatccaattgaagttttagagaaattaaccaaacaa 2059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2000 gtaaatgaacaacaatcacaacaacatccaattgaagttttagagaaattaaccaaacaa 2059


Query: 2060 acctatgaatctttacaacaatataaagagaataagacaaaaacaacatcatttgaacca 2119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2060 acctatgaatctttacaacaatataaagagaataagacaaaaacaacatcatttgaacca 2119


Query: 2120 atgttacaaatttgggtacaattatttaattctatcgaannnnnnnnnnaagaatcaaag 2179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2120 atgttacaaatttgggtacaattatttaattctatcgaannnnnnnnnnaagaatcaaag 2179


Query: 2180 ataatctcaaccatttatcaattcattgattcttcagattcttcaacttgtttaacatta 2239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2180 ataatctcaaccatttatcaattcattgattcttcagattcttcaacttgtttaacatta 2239


Query: 2240 ttggatagtcattgttcaaatgattatggattattatttagattcttaaatcaattatta 2299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2240 ttggatagtcattgttcaaatgattatggattattatttagattcttaaatcaattatta 2299


Query: 2300 gaattggatccaattgaatcttcaaaattctttgcaaaacatttcccaattatattacca 2359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2300 gaattggatccaattgaatcttcaaaattctttgcaaaacatttcccaattatattacca 2359


Query: 2360 agaaatattttaaattttacaaattctttaattgaaaacgatgatattattattaataaa 2419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2360 agaaatattttaaattttacaaattctttaattgaaaacgatgatattattattaataaa 2419


Query: 2420 agtaatgatagtggtggtggtagtagaagtaataaagaattaggtaatttaattaaattt 2479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2420 agtaatgatagtggtggtggtagtagaagtaataaagaattaggtaatttaattaaattt 2479


Query: 2480 gaatatttaaatcaattaatgaaattaaaaccagaatgtaaatttaattcactagaatta 2539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2480 gaatatttaaatcaattaatgaaattaaaaccagaatgtaaatttaattcactagaatta 2539


Query: 2540 ttagaacaatggttcctttcaaatttaatgaataataaaccaaatcaaaatcaattattt 2599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2540 ttagaacaatggttcctttcaaatttaatgaataataaaccaaatcaaaatcaattattt 2599


Query: 2600 gaagaaagagaagatatgtcaacaacatcaacaagaaaatttataccaaaattaaaatca 2659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2600 gaagaaagagaagatatgtcaacaacatcaacaagaaaatttataccaaaattaaaatca 2659


Query: 2660 aatttaattgaatggaaatcaaaagatactttaatacaaattattgataatgtaattaat 2719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2660 aatttaattgaatggaaatcaaaagatactttaatacaaattattgataatgtaattaat 2719


Query: 2720 aatgaatatggtaatggtaatttattgaaatcattggaatcaatgtctgctgaaaatggt 2779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2720 aatgaatatggtaatggtaatttattgaaatcattggaatcaatgtctgctgaaaatggt 2779


Query: 2780 tttcatattggcctttataaaatttatgaacattatttcaaaaatgtttattctatgaaa 2839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2780 tttcatattggcctttataaaatttatgaacattatttcaaaaatgtttattctatgaaa 2839


Query: 2840 tccattttacataatcaagaacaattgaatcattattcaaagaaactcttggaattaacc 2899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2840 tccattttacataatcaagaacaattgaatcattattcaaagaaactcttggaattaacc 2899


Query: 2900 attttcactgatgataaaaaaggtttttcaaattgttttgaaaaatagtacatcaattga 2959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2900 attttcactgatgataaaaaaggtttttcaaattgttttgaaaaatagtacatcaattga 2959


Query: 2960 aatttggtcaaatactttagaaattatgaaacaattaagaattgatcaacatgaaaatga 3019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2960 aatttggtcaaatactttagaaattatgaaacaattaagaattgatcaacatgaaaatga 3019


Query: 3020 agatcaatctggtgaatcaagtattacatttgaaatttcagaattatttatattggattt 3079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3020 agatcaatctggtgaatcaagtattacatttgaaatttcagaattatttatattggattt 3079


Query: 3080 aattggtaaagcaattggtccattggaaactattgaattggtttgcaaattttcagaaat 3139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3080 aattggtaaagcaattggtccattggaaactattgaattggtttgcaaattttcagaaat 3139


Query: 3140 gtttgaaaagagtaaaattgaaactaaattattatcagattggattaaatttggaaaatg 3199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3140 gtttgaaaagagtaaaattgaaactaaattattatcagattggattaaatttggaaaatg 3199


Query: 3200 gtcgttgtatgatagaccaaagttatcatatgatatcttatcacttttggatagtcattt 3259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3200 gtcgttgtatgatagaccaaagttatcatatgatatcttatcacttttggatagtcattt 3259


Query: 3260 atggttaaagaaacccttgaccatttcacctcaattcttaactatgattggtcctgaatt 3319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3260 atggttaaagaaacccttgaccatttcacctcaattcttaactatgattggtcctgaatt 3319


Query: 3320 ggacccaactttaccaaataatccattcaaagaattctttaataaacttggaacttcaag 3379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3320 ggacccaactttaccaaataatccattcaaagaattctttaataaacttggaacttcaag 3379


Query: 3380 tcatgatagtggtgataatatcgattttaaaataccttcattctttgaagataattcacg 3439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3380 tcatgatagtggtgataatatcgattttaaaataccttcattctttgaagataattcacg 3439


Query: 3440 tagacattggggtgtagaaactgaattatcaactggttcttgtccaatttgtaccttatc 3499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3440 tagacattggggtgtagaaactgaattatcaactggttcttgtccaatttgtaccttatc 3499


Query: 3500 tttagctgaaaatcctgaatcttcatttttaggttcaacacccgctacaattatagtatt 3559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3500 tttagctgaaaatcctgaatcttcatttttaggttcaacacccgctacaattatagtatt 3559


Query: 3560 cccaaattgtggtcattcatatcatcattgttgtattgaagatcaaggttgtatgttatg 3619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3560 cccaaattgtggtcattcatatcatcattgttgtattgaagatcaaggttgtatgttatg 3619


Query: 3620 tttttcaaagagat 3633
||||||||||||||
Sbjct: 3620 tttttcaaagagat 3633


Score = 1562 bits (788), Expect = 0.0
Identities = 788/788 (100%)
Strand = Plus / Plus


Query: 1 aataacaaatacacaactacaccaggatattcaattaaccacaaactcaaattcaaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aataacaaatacacaactacaccaggatattcaattaaccacaaactcaaattcaaattc 60


Query: 61 gaataattcgtcattaaataatcatcatcaacaacaacaaaatattgtacatactatacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaataattcgtcattaaataatcatcatcaacaacaacaaaatattgtacatactatacc 120


Query: 121 aataacaaattcaataccaccagtaaactcaatcactatttcaatattagcaagcacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aataacaaattcaataccaccagtaaactcaatcactatttcaatattagcaagcacatt 180


Query: 181 aaccaaatcgatagttgtaaattttcaaatactaacagctaccaatgttggtaaagtatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaccaaatcgatagttgtaaattttcaaatactaacagctaccaatgttggtaaagtatt 240


Query: 241 gagtatcattcaaattggtaagaaacaacgtgagaatactaaacagggtgcttgttttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagtatcattcaaattggtaagaaacaacgtgagaatactaaacagggtgcttgttttca 300


Query: 301 cccattttataaatcctctgtttacacatcaagacctggcaaaagattatggttagccga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cccattttataaatcctctgtttacacatcaagacctggcaaaagattatggttagccga 360


Query: 361 tccaattgatggtcgtgttttatcgactatgaatttcacaccatcctcaaccacaaacga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tccaattgatggtcgtgttttatcgactatgaatttcacaccatcctcaaccacaaacga 420


Query: 421 agatggtactacaaatccaataccaaatataatattgaaaccaaaaccattaatatcttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agatggtactacaaatccaataccaaatataatattgaaaccaaaaccattaatatcttc 480


Query: 481 aaattcatccaatgatgcaaatacttatctcactggtaaattcccaatgatattctcaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaattcatccaatgatgcaaatacttatctcactggtaaattcccaatgatattctcaaa 540


Query: 541 gttattaccatttggtaattacttaatatcatatgatgaattatcattactcttaatcga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gttattaccatttggtaattacttaatatcatatgatgaattatcattactcttaatcga 600


Query: 601 tgttaatgaagttgaagttttagaatggaaattagatacaaatcaaattcatgacttggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgttaatgaagttgaagttttagaatggaaattagatacaaatcaaattcatgacttggt 660


Query: 661 tgtttatcatgattcaatctatgcattacatggtcaaaatcattctatctctagaatttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgtttatcatgattcaatctatgcattacatggtcaaaatcattctatctctagaatttt 720


Query: 721 cacttcaattcctttagaaattttaccaactcctcaagaattacaagaacaatctgatca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cacttcaattcctttagaaattttaccaactcctcaagaattacaagaacaatctgatca 780


Query: 781 attacaaa 788
||||||||
Sbjct: 781 attacaaa 788


Score = 585 bits (295), Expect = e-166
Identities = 295/295 (100%)
Strand = Plus / Plus


Query: 1116 cttcatcattaaaatcatcaactgatcaattcgttgatgataaattattggatagtacaa 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1116 cttcatcattaaaatcatcaactgatcaattcgttgatgataaattattggatagtacaa 1175


Query: 1176 caacgacaacagcagttgaaacatcaattcaaagagtagcatcaaaagaatgtattttct 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1176 caacgacaacagcagttgaaacatcaattcaaagagtagcatcaaaagaatgtattttct 1235


Query: 1236 cagatattcctttatcatcagaaccattaatggtatcaacaagtgttaaagatccaactt 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1236 cagatattcctttatcatcagaaccattaatggtatcaacaagtgttaaagatccaactt 1295


Query: 1296 tagctgcatcaacaactagaaaggttataaagaaaaaggttataaaaacagcattaccac 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1296 tagctgcatcaacaactagaaaggttataaagaaaaaggttataaaaacagcattaccac 1355


Query: 1356 aggatcaacaattaaatggaacaaataatacagcaactctatcaacttcaccacc 1410
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1356 aggatcaacaattaaatggaacaaataatacagcaactctatcaacttcaccacc 1410


Score = 515 bits (260), Expect = e-145
Identities = 260/260 (100%)
Strand = Plus / Plus


Query: 825 ctgaggaaataataagtgaaccacaatcacaaccacaaccaatagcaatagcctcattaa 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 ctgaggaaataataagtgaaccacaatcacaaccacaaccaatagcaatagcctcattaa 884


Query: 885 ttgaggaaaagaaagatgaacaattacaaccaaagaaatctgaatcacaagagaatttaa 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 ttgaggaaaagaaagatgaacaattacaaccaaagaaatctgaatcacaagagaatttaa 944


Query: 945 caactttatcaaatagtgataatataattggtagtgaaattgatagtacaaatactgata 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945 caactttatcaaatagtgataatataattggtagtgaaattgatagtacaaatactgata 1004


Query: 1005 attctacattatcaagtagtacaaattcattaactattgaaggtagtgcaagtttgccat 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1005 attctacattatcaagtagtacaaattcattaactattgaaggtagtgcaagtttgccat 1064


Query: 1065 tagttagtgaatcatcaaac 1084
||||||||||||||||||||
Sbjct: 1065 tagttagtgaatcatcaaac 1084


Score = 511 bits (258), Expect = e-144
Identities = 272/279 (97%)
Strand = Plus / Plus


Query: 1654 cacaccagcagaagtatcattatcaccnnnnnnngaagaaactacaatagcaccaacacc 1713
||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1654 cacaccagcagaagtatcattatcaccaaaaaaagaagaaactacaatagcaccaacacc 1713


Query: 1714 aacaccaataccaacatcagcaacaacagttacagctaataatatacaacagggtatttt 1773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1714 aacaccaataccaacatcagcaacaacagttacagctaataatatacaacagggtatttt 1773


Query: 1774 taaaacattaaattcagctacatcatcattcttggagattaagcaatttgcattaaataa 1833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1774 taaaacattaaattcagctacatcatcattcttggagattaagcaatttgcattaaataa 1833


Query: 1834 aacaaatgaaattaaatctgatattacacataaaattttaggtccatcaagtggtgatga 1893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1834 aacaaatgaaattaaatctgatattacacataaaattttaggtccatcaagtggtgatga 1893


Query: 1894 tataaattcaagtaataatacaaatgtaacattaaataa 1932
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1894 tataaattcaagtaataatacaaatgtaacattaaataa 1932


Score = 293 bits (148), Expect = 7e-79
Identities = 162/169 (95%)
Strand = Plus / Plus


Query: 1466 tcaataggagcaccaacagaagtcaaaagaacagttattgtaaagnnnnnnnttattaaa 1525
||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1466 tcaataggagcaccaacagaagtcaaaagaacagttattgtaaagaaaaaaattattaaa 1525


Query: 1526 aaagcagcggcattatcaactacaactacaaccacaccacaaatctcatcgccaccaatt 1585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1526 aaagcagcggcattatcaactacaactacaaccacaccacaaatctcatcgccaccaatt 1585


Query: 1586 tcaaatcctacaccatcaccacctttatatgtagaaaccgtatcatcat 1634
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1586 tcaaatcctacaccatcaccacctttatatgtagaaaccgtatcatcat 1634


Score = 40.1 bits (20), Expect = 0.017
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 81 atcatcatcaacaacaacaa 100
||||||||||||||||||||
Sbjct: 1627 atcatcatcaacaacaacaa 1646


Score = 32.2 bits (16), Expect = 4.1
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 81 atcatcatcaacaacaacaa 100
||||||| ||||||||||||
Sbjct: 1630 atcatcaacaacaacaacaa 1649


Score = 32.2 bits (16), Expect = 4.1
Identities = 31/36 (86%)
Strand = Plus / Plus


Query: 832 aataataagtgaaccacaatcacaaccacaaccaat 867
|||| ||| ||||| ||||||||||| ||| |||||
Sbjct: 1996 aatagtaaatgaacaacaatcacaacaacatccaat 2031


Score = 32.2 bits (16), Expect = 4.1
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 81 atcatcatcaacaaca 96
||||||||||||||||
Sbjct: 1423 atcatcatcaacaaca 1438


>Contig-U11988-1 (Contig-U11988-1Q) /CSM_Contig/Contig-U11988-1Q.Seq.d
Length = 1316

Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus


Query: 1704 caccaacaccaacaccaataccaacatcagcaacaacagt 1743
|||| ||||||||||||| ||||||| |||||||||||||
Sbjct: 836 cacctacaccaacaccaacaccaacaccagcaacaacagt 875


>Contig-U12500-1 (Contig-U12500-1Q) /CSM_Contig/Contig-U12500-1Q.Seq.d
Length = 1529

Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus


Query: 1704 caccaacaccaacaccaataccaacatcagcaacaaca 1741
|||||||||||||||||| ||||||| ||||| |||||
Sbjct: 292 caccaacaccaacaccaacaccaacaccagcaccaaca 329


Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus


Query: 1704 caccaacaccaacaccaataccaaca 1729
|||||||||||||||||| |||||||
Sbjct: 280 caccaacaccaacaccaacaccaaca 305


Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus


Query: 1704 caccaacaccaacaccaataccaaca 1729
|||||||||||||||||| |||||||
Sbjct: 268 caccaacaccaacaccaacaccaaca 293


Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus


Query: 1704 caccaacaccaacaccaataccaaca 1729
|||||||||||||||||| |||||||
Sbjct: 262 caccaacaccaacaccaacaccaaca 287


Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus


Query: 1704 caccaacaccaacaccaataccaaca 1729
|||||||||||||||||| |||||||
Sbjct: 274 caccaacaccaacaccaacaccaaca 299


Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus


Query: 1704 caccaacaccaacaccaataccaaca 1729
|||||||||||||||||| |||||||
Sbjct: 286 caccaacaccaacaccaacaccaaca 311


Score = 40.1 bits (20), Expect = 0.017
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 1702 agcaccaacaccaacaccaa 1721
||||||||||||||||||||
Sbjct: 320 agcaccaacaccaacaccaa 339


Score = 38.2 bits (19), Expect = 0.066
Identities = 22/23 (95%)
Strand = Plus / Plus


Query: 1707 caacaccaacaccaataccaaca 1729
||||||||||||||| |||||||
Sbjct: 259 caacaccaacaccaacaccaaca 281


Score = 36.2 bits (18), Expect = 0.26
Identities = 24/26 (92%)
Strand = Plus / Plus


Query: 1704 caccaacaccaacaccaataccaaca 1729
||||||||||| |||||| |||||||
Sbjct: 310 caccaacaccagcaccaacaccaaca 335


Score = 36.2 bits (18), Expect = 0.26
Identities = 24/26 (92%)
Strand = Plus / Plus


Query: 1704 caccaacaccaacaccaataccaaca 1729
||||| |||||||||||| |||||||
Sbjct: 316 caccagcaccaacaccaacaccaaca 341


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 89,626
Number of Sequences: 6905
Number of extensions: 89626
Number of successful extensions: 11424
Number of sequences better than 10.0: 680
length of query: 3658
length of database: 5,674,871
effective HSP length: 17
effective length of query: 3641
effective length of database: 5,557,486
effective search space: 20234806526
effective search space used: 20234806526
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2008.11.23
Homology vs DNA
Query= Contig-U11332-1 (Contig-U11332-1Q) /CSM_Contig/Contig-U11332-1Q.Seq.d
(3658 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 1552 0.0 1
(BJ404488) Dictyostelium discoideum cDNA clone:dds28o13, 3' ... 1372 0.0 1
(BJ386380) Dictyostelium discoideum cDNA clone:ddc58e02, 3' ... 1314 0.0 2
(BJ384495) Dictyostelium discoideum cDNA clone:ddc49m14, 3' ... 1310 0.0 1
(BJ385445) Dictyostelium discoideum cDNA clone:ddc55a04, 3' ... 1300 0.0 2
(BJ379477) Dictyostelium discoideum cDNA clone:ddc35b01, 3' ... 1294 0.0 1
(BJ351188) Dictyostelium discoideum cDNA clone:dda42i07, 3' ... 1292 0.0 2
(BJ386370) Dictyostelium discoideum cDNA clone:ddc58b06, 3' ... 1283 0.0 2
(BJ408273) Dictyostelium discoideum cDNA clone:dds45d10, 3' ... 1245 0.0 3
(BJ353018) Dictyostelium discoideum cDNA clone:dda48o16, 3' ... 1245 0.0 4
(BJ415231) Dictyostelium discoideum cDNA clone:ddv21k24, 5' ... 1241 0.0 1
(BJ365953) Dictyostelium discoideum cDNA clone:ddc37m05, 5' ... 1199 0.0 1
(BJ428125) Dictyostelium discoideum cDNA clone:ddv10h19, 3' ... 1181 0.0 1
(AU039731) Dictyostelium discoideum slug cDNA, clone SLG280. 1128 0.0 1
(BJ400987) Dictyostelium discoideum cDNA clone:dds15p13, 3' ... 1049 0.0 1
(BJ360774) Dictyostelium discoideum cDNA clone:ddc7e23, 5' e... 823 0.0 3
(BJ424609) Dictyostelium discoideum cDNA clone:ddv53b03, 5' ... 668 0.0 2
(BJ414630) Dictyostelium discoideum cDNA clone:ddv19l21, 5' ... 620 0.0 2
(BJ352926) Dictyostelium discoideum cDNA clone:dda48j12, 3' ... 555 0.0 5
(BJ370678) Dictyostelium discoideum cDNA clone:ddc55a04, 5' ... 515 0.0 3
(BJ335038) Dictyostelium discoideum cDNA clone:dda48o16, 5' ... 515 0.0 3
(BJ334951) Dictyostelium discoideum cDNA clone:dda48j12, 5' ... 515 0.0 3
(BJ333343) Dictyostelium discoideum cDNA clone:dda42i07, 5' ... 585 0.0 4
(BJ385560) Dictyostelium discoideum cDNA clone:ddc55j08, 3' ... 515 0.0 4
(BJ392720) Dictyostelium discoideum cDNA clone:dds28o13, 5' ... 515 0.0 3
(BJ432806) Dictyostelium discoideum cDNA clone:ddv19l21, 3' ... 585 0.0 2
(BJ355375) Dictyostelium discoideum cDNA clone:dda56i17, 3' ... 515 0.0 2
(BJ349932) Dictyostelium discoideum cDNA clone:dda38j03, 3' ... 515 0.0 3
(BJ379607) Dictyostelium discoideum cDNA clone:ddc35m08, 3' ... 513 0.0 3
(BJ365334) Dictyostelium discoideum cDNA clone:ddc35b01, 5' ... 488 0.0 5
(BJ439798) Dictyostelium discoideum cDNA clone:ddv41k16, 3' ... 515 0.0 2
(BJ445346) Dictyostelium discoideum cDNA clone:ddv59o02, 3' ... 515 0.0 2
(BJ443661) Dictyostelium discoideum cDNA clone:ddv53n13, 3' ... 515 0.0 2
(BJ384160) Dictyostelium discoideum cDNA clone:ddc48p09, 3' ... 515 0.0 2
(BJ445787) Dictyostelium discoideum cDNA clone:ddv60l13, 3' ... 509 0.0 2
(BJ386526) Dictyostelium discoideum cDNA clone:ddc58e14, 3' ... 478 0.0 2
(BJ378627) Dictyostelium discoideum cDNA clone:ddc32g12, 3' ... 504 0.0 2
(BJ384097) Dictyostelium discoideum cDNA clone:ddc48b11, 3' ... 496 0.0 2
(BJ344984) Dictyostelium discoideum cDNA clone:dda21p04, 3' ... 507 0.0 2
(BJ350345) Dictyostelium discoideum cDNA clone:dda39d17, 3' ... 577 0.0 5
(BJ441676) Dictyostelium discoideum cDNA clone:ddv47a13, 3' ... 515 0.0 2
(BJ377384) Dictyostelium discoideum cDNA clone:ddc24i11, 3' ... 490 0.0 2
(BJ386030) Dictyostelium discoideum cDNA clone:ddc56n21, 3' ... 513 0.0 2
(BJ358156) Dictyostelium discoideum cDNA clone:dda65m22, 3' ... 507 0.0 2
(BJ443631) Dictyostelium discoideum cDNA clone:ddv53g16, 3' ... 490 0.0 2
(BJ397159) Dictyostelium discoideum cDNA clone:dds45d10, 5' ... 585 0.0 4
(BJ369193) Dictyostelium discoideum cDNA clone:ddc49m14, 5' ... 515 0.0 2
(BJ374437) Dictyostelium discoideum cDNA clone:ddc7e23, 3' e... 735 0.0 4
(BJ371438) Dictyostelium discoideum cDNA clone:ddc58b06, 5' ... 551 0.0 7
(BJ443464) Dictyostelium discoideum cDNA clone:ddv53b03, 3' ... 585 0.0 4
(BJ439428) Dictyostelium discoideum cDNA clone:ddv40n09, 3' ... 424 0.0 2
(BJ380670) Dictyostelium discoideum cDNA clone:ddc38m22, 3' ... 470 0.0 2
(BJ380110) Dictyostelium discoideum cDNA clone:ddc37e03, 3' ... 466 0.0 2
(BJ409996) Dictyostelium discoideum cDNA clone:ddv10h19, 5' ... 404 0.0 3
(BJ358288) Dictyostelium discoideum cDNA clone:dda56k20, 3' ... 515 0.0 2
(BJ444578) Dictyostelium discoideum cDNA clone:ddv56f23, 3' ... 585 0.0 3
(BJ444930) Dictyostelium discoideum cDNA clone:ddv57l21, 3' ... 404 0.0 5
(BJ381216) Dictyostelium discoideum cDNA clone:ddc40f19, 3' ... 398 0.0 2
(BJ382118) Dictyostelium discoideum cDNA clone:ddc43o20, 3' ... 410 0.0 2
(BJ433443) Dictyostelium discoideum cDNA clone:ddv21k24, 3' ... 266 e-170 4
(BJ441080) Dictyostelium discoideum cDNA clone:ddv45i17, 3' ... 379 e-170 2
(BJ407654) Dictyostelium discoideum cDNA clone:dds43a08, 3' ... 579 e-160 1
(BJ356615) Dictyostelium discoideum cDNA clone:dda60j24, 3' ... 515 e-160 2
(BJ407549) Dictyostelium discoideum cDNA clone:dds38m19, 3' ... 561 e-155 1
(BJ399139) Dictyostelium discoideum cDNA clone:dds4h08, 3' e... 442 e-135 2
(BJ439881) Dictyostelium discoideum cDNA clone:ddv41o19, 3' ... 410 e-109 1
(BJ380144) Dictyostelium discoideum cDNA clone:ddc37m05, 3' ... 361 1e-94 1
(BJ442927) Dictyostelium discoideum cDNA clone:ddv51j09, 3' ... 184 2e-41 1
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 44 2e-11 19
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 38 3e-10 24
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 46 1e-08 21
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 38 1e-08 22
(AC116032) Dictyostelium discoideum chromosome 2 map 4158743... 52 7e-08 10
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 46 1e-07 22
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 36 2e-06 19
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 52 4e-06 12
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 40 5e-06 22
(AM398681) Flavobacterium psychrophilum JIP02/86 complete ge... 42 5e-06 29
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 48 2e-05 13
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 38 3e-05 20
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 42 1e-04 24
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 48 2e-04 18
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 42 2e-04 22
(AC115680) Dictyostelium discoideum chromosome 2 map 4915084... 52 3e-04 13
(AF129455) Simian immunodeficiency virus clone SIV1480-AconV... 60 6e-04 1
(I52145) Sequence 25 from patent US 5646029. 60 6e-04 1
(AR051971) Sequence 25 from patent US 5830747. 60 6e-04 1
(FH942319) CHO_OF6731xp12f1.ab1 CHO_OF6 Nicotiana tabacum ge... 60 6e-04 1
(FH469705) CHO_OF4966xa22f1.ab1 CHO_OF4 Nicotiana tabacum ge... 60 6e-04 1
(FH184222) CHO_OF3426xe06r1.ab1 CHO_OF3 Nicotiana tabacum ge... 60 6e-04 1
(FG639194) TT-17_F09 Burley21 trichome library Nicotiana tab... 60 6e-04 1
(FG169650) AGN_RNC003xm02f1.ab1 AGN_RNC Nicotiana tabacum cD... 60 6e-04 1
(FG144584) AGN_RPC015xj17f1.ab1 AGN_RPC Nicotiana tabacum cD... 60 6e-04 1
(FG141435) AGN_RPC025xj03f1.ab1 AGN_RPC Nicotiana tabacum cD... 60 6e-04 1
(AF111942) Dictyostelium discoideum AX4 development protein ... 44 6e-04 5
(EX846519) CBNC6435.fwd CBNC Phycomyces blakesleeanus NRRL15... 56 7e-04 2
(AU053723) Dictyostelium discoideum slug cDNA, clone SLJ555. 38 0.001 4
(AJ277590) Dictyostelium discoideum iplA gene for inositol 1... 36 0.002 8
(EY700345) CS00-C3-700-093-E08-CT.F Sweet orange fruit, deve... 38 0.002 3
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 40 0.002 16

>(AC116984) Dictyostelium discoideum chromosome 2 map 2567470-3108875
strain AX4, complete sequence.
Length = 541399

Score = 1552 bits (783), Expect = 0.0
Identities = 783/783 (100%)
Strand = Plus / Minus


Query: 1 aataacaaatacacaactacaccaggatattcaattaaccacaaactcaaattcaaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178635 aataacaaatacacaactacaccaggatattcaattaaccacaaactcaaattcaaattc 178576


Query: 61 gaataattcgtcattaaataatcatcatcaacaacaacaaaatattgtacatactatacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178575 gaataattcgtcattaaataatcatcatcaacaacaacaaaatattgtacatactatacc 178516


Query: 121 aataacaaattcaataccaccagtaaactcaatcactatttcaatattagcaagcacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178515 aataacaaattcaataccaccagtaaactcaatcactatttcaatattagcaagcacatt 178456


Query: 181 aaccaaatcgatagttgtaaattttcaaatactaacagctaccaatgttggtaaagtatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178455 aaccaaatcgatagttgtaaattttcaaatactaacagctaccaatgttggtaaagtatt 178396


Query: 241 gagtatcattcaaattggtaagaaacaacgtgagaatactaaacagggtgcttgttttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178395 gagtatcattcaaattggtaagaaacaacgtgagaatactaaacagggtgcttgttttca 178336


Query: 301 cccattttataaatcctctgtttacacatcaagacctggcaaaagattatggttagccga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178335 cccattttataaatcctctgtttacacatcaagacctggcaaaagattatggttagccga 178276


Query: 361 tccaattgatggtcgtgttttatcgactatgaatttcacaccatcctcaaccacaaacga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178275 tccaattgatggtcgtgttttatcgactatgaatttcacaccatcctcaaccacaaacga 178216


Query: 421 agatggtactacaaatccaataccaaatataatattgaaaccaaaaccattaatatcttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178215 agatggtactacaaatccaataccaaatataatattgaaaccaaaaccattaatatcttc 178156


Query: 481 aaattcatccaatgatgcaaatacttatctcactggtaaattcccaatgatattctcaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178155 aaattcatccaatgatgcaaatacttatctcactggtaaattcccaatgatattctcaaa 178096


Query: 541 gttattaccatttggtaattacttaatatcatatgatgaattatcattactcttaatcga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178095 gttattaccatttggtaattacttaatatcatatgatgaattatcattactcttaatcga 178036


Query: 601 tgttaatgaagttgaagttttagaatggaaattagatacaaatcaaattcatgacttggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178035 tgttaatgaagttgaagttttagaatggaaattagatacaaatcaaattcatgacttggt 177976


Query: 661 tgtttatcatgattcaatctatgcattacatggtcaaaatcattctatctctagaatttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177975 tgtttatcatgattcaatctatgcattacatggtcaaaatcattctatctctagaatttt 177916


Query: 721 cacttcaattcctttagaaattttaccaactcctcaagaattacaagaacaatctgatca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177915 cacttcaattcctttagaaattttaccaactcctcaagaattacaagaacaatctgatca 177856


Query: 781 att 783
|||
Sbjct: 177855 att 177853

Score = 1374 bits (693), Expect(2) = 0.0
Identities = 693/693 (100%)
Strand = Plus / Minus


Query: 2941 aaaatagtacatcaattgaaatttggtcaaatactttagaaattatgaaacaattaagaa 3000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175296 aaaatagtacatcaattgaaatttggtcaaatactttagaaattatgaaacaattaagaa 175237


Query: 3001 ttgatcaacatgaaaatgaagatcaatctggtgaatcaagtattacatttgaaatttcag 3060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175236 ttgatcaacatgaaaatgaagatcaatctggtgaatcaagtattacatttgaaatttcag 175177


Query: 3061 aattatttatattggatttaattggtaaagcaattggtccattggaaactattgaattgg 3120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175176 aattatttatattggatttaattggtaaagcaattggtccattggaaactattgaattgg 175117


Query: 3121 tttgcaaattttcagaaatgtttgaaaagagtaaaattgaaactaaattattatcagatt 3180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175116 tttgcaaattttcagaaatgtttgaaaagagtaaaattgaaactaaattattatcagatt 175057


Query: 3181 ggattaaatttggaaaatggtcgttgtatgatagaccaaagttatcatatgatatcttat 3240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175056 ggattaaatttggaaaatggtcgttgtatgatagaccaaagttatcatatgatatcttat 174997


Query: 3241 cacttttggatagtcatttatggttaaagaaacccttgaccatttcacctcaattcttaa 3300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174996 cacttttggatagtcatttatggttaaagaaacccttgaccatttcacctcaattcttaa 174937


Query: 3301 ctatgattggtcctgaattggacccaactttaccaaataatccattcaaagaattcttta 3360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174936 ctatgattggtcctgaattggacccaactttaccaaataatccattcaaagaattcttta 174877


Query: 3361 ataaacttggaacttcaagtcatgatagtggtgataatatcgattttaaaataccttcat 3420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174876 ataaacttggaacttcaagtcatgatagtggtgataatatcgattttaaaataccttcat 174817


Query: 3421 tctttgaagataattcacgtagacattggggtgtagaaactgaattatcaactggttctt 3480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174816 tctttgaagataattcacgtagacattggggtgtagaaactgaattatcaactggttctt 174757


Query: 3481 gtccaatttgtaccttatctttagctgaaaatcctgaatcttcatttttaggttcaacac 3540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174756 gtccaatttgtaccttatctttagctgaaaatcctgaatcttcatttttaggttcaacac 174697


Query: 3541 ccgctacaattatagtattcccaaattgtggtcattcatatcatcattgttgtattgaag 3600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174696 ccgctacaattatagtattcccaaattgtggtcattcatatcatcattgttgtattgaag 174637


Query: 3601 atcaaggttgtatgttatgtttttcaaagagat 3633
|||||||||||||||||||||||||||||||||
Sbjct: 174636 atcaaggttgtatgttatgtttttcaaagagat 174604

Score = 823 bits (415), Expect(2) = 0.0
Identities = 415/415 (100%)
Strand = Plus / Minus


Query: 2529 cactagaattattagaacaatggttcctttcaaatttaatgaataataaaccaaatcaaa 2588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175707 cactagaattattagaacaatggttcctttcaaatttaatgaataataaaccaaatcaaa 175648


Query: 2589 atcaattatttgaagaaagagaagatatgtcaacaacatcaacaagaaaatttataccaa 2648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175647 atcaattatttgaagaaagagaagatatgtcaacaacatcaacaagaaaatttataccaa 175588


Query: 2649 aattaaaatcaaatttaattgaatggaaatcaaaagatactttaatacaaattattgata 2708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175587 aattaaaatcaaatttaattgaatggaaatcaaaagatactttaatacaaattattgata 175528


Query: 2709 atgtaattaataatgaatatggtaatggtaatttattgaaatcattggaatcaatgtctg 2768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175527 atgtaattaataatgaatatggtaatggtaatttattgaaatcattggaatcaatgtctg 175468


Query: 2769 ctgaaaatggttttcatattggcctttataaaatttatgaacattatttcaaaaatgttt 2828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175467 ctgaaaatggttttcatattggcctttataaaatttatgaacattatttcaaaaatgttt 175408


Query: 2829 attctatgaaatccattttacataatcaagaacaattgaatcattattcaaagaaactct 2888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175407 attctatgaaatccattttacataatcaagaacaattgaatcattattcaaagaaactct 175348


Query: 2889 tggaattaaccattttcactgatgataaaaaaggtttttcaaattgttttgaaaa 2943
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175347 tggaattaaccattttcactgatgataaaaaaggtttttcaaattgttttgaaaa 175293

Score = 585 bits (295), Expect(19) = 0.0
Identities = 295/295 (100%)
Strand = Plus / Minus


Query: 1116 cttcatcattaaaatcatcaactgatcaattcgttgatgataaattattggatagtacaa 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177408 cttcatcattaaaatcatcaactgatcaattcgttgatgataaattattggatagtacaa 177349


Query: 1176 caacgacaacagcagttgaaacatcaattcaaagagtagcatcaaaagaatgtattttct 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177348 caacgacaacagcagttgaaacatcaattcaaagagtagcatcaaaagaatgtattttct 177289


Query: 1236 cagatattcctttatcatcagaaccattaatggtatcaacaagtgttaaagatccaactt 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177288 cagatattcctttatcatcagaaccattaatggtatcaacaagtgttaaagatccaactt 177229


Query: 1296 tagctgcatcaacaactagaaaggttataaagaaaaaggttataaaaacagcattaccac 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177228 tagctgcatcaacaactagaaaggttataaagaaaaaggttataaaaacagcattaccac 177169


Query: 1356 aggatcaacaattaaatggaacaaataatacagcaactctatcaacttcaccacc 1410
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177168 aggatcaacaattaaatggaacaaataatacagcaactctatcaacttcaccacc 177114

Score = 555 bits (280), Expect(19) = 0.0
Identities = 280/280 (100%)
Strand = Plus / Minus


Query: 2169 aagaatcaaagataatctcaaccatttatcaattcattgattcttcagattcttcaactt 2228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176067 aagaatcaaagataatctcaaccatttatcaattcattgattcttcagattcttcaactt 176008


Query: 2229 gtttaacattattggatagtcattgttcaaatgattatggattattatttagattcttaa 2288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176007 gtttaacattattggatagtcattgttcaaatgattatggattattatttagattcttaa 175948


Query: 2289 atcaattattagaattggatccaattgaatcttcaaaattctttgcaaaacatttcccaa 2348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175947 atcaattattagaattggatccaattgaatcttcaaaattctttgcaaaacatttcccaa 175888


Query: 2349 ttatattaccaagaaatattttaaattttacaaattctttaattgaaaacgatgatatta 2408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175887 ttatattaccaagaaatattttaaattttacaaattctttaattgaaaacgatgatatta 175828


Query: 2409 ttattaataaaagtaatgatagtggtggtggtagtagaag 2448
||||||||||||||||||||||||||||||||||||||||
Sbjct: 175827 ttattaataaaagtaatgatagtggtggtggtagtagaag 175788

Score = 488 bits (246), Expect(19) = 0.0
Identities = 246/246 (100%)
Strand = Plus / Minus


Query: 1688 gaagaaactacaatagcaccaacaccaacaccaataccaacatcagcaacaacagttaca 1747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176836 gaagaaactacaatagcaccaacaccaacaccaataccaacatcagcaacaacagttaca 176777


Query: 1748 gctaataatatacaacagggtatttttaaaacattaaattcagctacatcatcattcttg 1807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176776 gctaataatatacaacagggtatttttaaaacattaaattcagctacatcatcattcttg 176717


Query: 1808 gagattaagcaatttgcattaaataaaacaaatgaaattaaatctgatattacacataaa 1867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176716 gagattaagcaatttgcattaaataaaacaaatgaaattaaatctgatattacacataaa 176657


Query: 1868 attttaggtccatcaagtggtgatgatataaattcaagtaataatacaaatgtaacatta 1927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176656 attttaggtccatcaagtggtgatgatataaattcaagtaataatacaaatgtaacatta 176597


Query: 1928 aataat 1933
||||||
Sbjct: 176596 aataat 176591

Score = 301 bits (152), Expect(19) = 0.0
Identities = 152/152 (100%)
Strand = Plus / Minus


Query: 933 aagagaatttaacaactttatcaaatagtgataatataattggtagtgaaattgatagta 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177591 aagagaatttaacaactttatcaaatagtgataatataattggtagtgaaattgatagta 177532


Query: 993 caaatactgataattctacattatcaagtagtacaaattcattaactattgaaggtagtg 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177531 caaatactgataattctacattatcaagtagtacaaattcattaactattgaaggtagtg 177472


Query: 1053 caagtttgccattagttagtgaatcatcaaac 1084
||||||||||||||||||||||||||||||||
Sbjct: 177471 caagtttgccattagttagtgaatcatcaaac 177440

Score = 252 bits (127), Expect(19) = 0.0
Identities = 127/127 (100%)
Strand = Plus / Minus


Query: 2032 tgaagttttagagaaattaaccaaacaaacctatgaatctttacaacaatataaagagaa 2091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176492 tgaagttttagagaaattaaccaaacaaacctatgaatctttacaacaatataaagagaa 176433


Query: 2092 taagacaaaaacaacatcatttgaaccaatgttacaaatttgggtacaattatttaattc 2151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176432 taagacaaaaacaacatcatttgaaccaatgttacaaatttgggtacaattatttaattc 176373


Query: 2152 tatcgaa 2158
|||||||
Sbjct: 176372 tatcgaa 176366

Score = 220 bits (111), Expect(19) = 0.0
Identities = 111/111 (100%)
Strand = Plus / Minus


Query: 825 ctgaggaaataataagtgaaccacaatcacaaccacaaccaatagcaatagcctcattaa 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177811 ctgaggaaataataagtgaaccacaatcacaaccacaaccaatagcaatagcctcattaa 177752


Query: 885 ttgaggaaaagaaagatgaacaattacaaccaaagaaatctgaatcacaag 935
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177751 ttgaggaaaagaaagatgaacaattacaaccaaagaaatctgaatcacaag 177701

Score = 210 bits (106), Expect(19) = 0.0
Identities = 106/106 (100%)
Strand = Plus / Minus


Query: 1529 gcagcggcattatcaactacaactacaaccacaccacaaatctcatcgccaccaatttca 1588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176995 gcagcggcattatcaactacaactacaaccacaccacaaatctcatcgccaccaatttca 176936


Query: 1589 aatcctacaccatcaccacctttatatgtagaaaccgtatcatcat 1634
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176935 aatcctacaccatcaccacctttatatgtagaaaccgtatcatcat 176890

Score = 81.8 bits (41), Expect(19) = 0.0
Identities = 41/41 (100%)
Strand = Plus / Minus


Query: 1470 taggagcaccaacagaagtcaaaagaacagttattgtaaag 1510
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 177054 taggagcaccaacagaagtcaaaagaacagttattgtaaag 177014

Score = 54.0 bits (27), Expect(19) = 0.0
Identities = 27/27 (100%)
Strand = Plus / Minus


Query: 1654 cacaccagcagaagtatcattatcacc 1680
|||||||||||||||||||||||||||
Sbjct: 176870 cacaccagcagaagtatcattatcacc 176844

Score = 42.1 bits (21), Expect(19) = 0.0
Identities = 21/21 (100%)
Strand = Plus / Minus


Query: 3061 aattatttatattggatttaa 3081
|||||||||||||||||||||
Sbjct: 63681 aattatttatattggatttaa 63661

Score = 32.2 bits (16), Expect(19) = 0.0
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 634 agatacaaatcaaatt 649
||||||||||||||||
Sbjct: 333851 agatacaaatcaaatt 333836

Score = 30.2 bits (15), Expect(19) = 0.0
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 3134 agaaatgtttgaaaa 3148
|||||||||||||||
Sbjct: 39978 agaaatgtttgaaaa 39964

Score = 30.2 bits (15), Expect(19) = 0.0
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 2619 caacaacatcaacaa 2633
|||||||||||||||
Sbjct: 105072 caacaacatcaacaa 105058

Score = 30.2 bits (15), Expect(19) = 0.0
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 160 ttcaatattagcaag 174
|||||||||||||||
Sbjct: 514833 ttcaatattagcaag 514819

Score = 28.2 bits (14), Expect(19) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 3458 aactgaattatcaa 3471
||||||||||||||
Sbjct: 21892 aactgaattatcaa 21879

Score = 28.2 bits (14), Expect(19) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 2644 accaaaattaaaat 2657
||||||||||||||
Sbjct: 74261 accaaaattaaaat 74248

Score = 28.2 bits (14), Expect(19) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 2561 aatttaatgaataa 2574
||||||||||||||
Sbjct: 137914 aatttaatgaataa 137901

Score = 28.2 bits (14), Expect(19) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 603 ttaatgaagttgaa 616
||||||||||||||
Sbjct: 397933 ttaatgaagttgaa 397920

Score = 28.2 bits (14), Expect(19) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 246 tcattcaaattggt 259
||||||||||||||
Sbjct: 438144 tcattcaaattggt 438131

Score = 34.2 bits (17), Expect(19) = 5e-07
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 1537 attatcaactacaactacaac 1557
||||||||| |||||||||||
Sbjct: 235611 attatcaacaacaactacaac 235631

Score = 34.2 bits (17), Expect(19) = 5e-07
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 2378 acaaattctttaattga 2394
|||||||||||||||||
Sbjct: 281631 acaaattctttaattga 281647

Score = 34.2 bits (17), Expect(19) = 5e-07
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 2429 agtggtggtggtagtag 2445
|||||||||||||||||
Sbjct: 383494 agtggtggtggtagtag 383510

Score = 34.2 bits (17), Expect(19) = 5e-07
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 2664 taattgaatggaaatcaaaag 2684
||||||| |||||||||||||
Sbjct: 410626 taattgattggaaatcaaaag 410646

Score = 34.2 bits (17), Expect(19) = 5e-07
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 2712 taattaataatgaatat 2728
|||||||||||||||||
Sbjct: 411253 taattaataatgaatat 411269

Score = 32.2 bits (16), Expect(19) = 5e-07
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 604 taatgaagttgaagtt 619
||||||||||||||||
Sbjct: 52222 taatgaagttgaagtt 52237

Score = 32.2 bits (16), Expect(19) = 5e-07
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 2409 ttattaataaaagtaatgat 2428
|||||||||||| |||||||
Sbjct: 372271 ttattaataaaattaatgat 372290

Score = 30.2 bits (15), Expect(19) = 5e-07
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 84 atcatcaacaacaacaaaa 102
|||| ||||||||||||||
Sbjct: 6586 atcaacaacaacaacaaaa 6604

Score = 30.2 bits (15), Expect(19) = 5e-07
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 938 aatttaacaacttta 952
|||||||||||||||
Sbjct: 65660 aatttaacaacttta 65674

Score = 30.2 bits (15), Expect(19) = 5e-07
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 1168 tagtacaacaacgacaaca 1186
|||||||||||| ||||||
Sbjct: 180940 tagtacaacaacaacaaca 180958

Score = 30.2 bits (15), Expect(19) = 5e-07
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 2287 aaatcaattattagaattg 2305
||||||||||||| |||||
Sbjct: 263391 aaatcaattattataattg 263409

Score = 30.2 bits (15), Expect(19) = 5e-07
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 2397 acgatgatattatta 2411
|||||||||||||||
Sbjct: 291488 acgatgatattatta 291502

Score = 28.2 bits (14), Expect(19) = 5e-07
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 126 caaattcaatacca 139
||||||||||||||
Sbjct: 46690 caaattcaatacca 46703

Score = 28.2 bits (14), Expect(19) = 5e-07
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 960 gtgataatataatt 973
||||||||||||||
Sbjct: 168733 gtgataatataatt 168746

Score = 28.2 bits (14), Expect(19) = 5e-07
Identities = 20/22 (90%)
Strand = Plus / Plus


Query: 1321 tataaagaaaaaggttataaaa 1342
|||||||||||| ||||||||
Sbjct: 199693 tataaagaaaaacattataaaa 199714

Score = 28.2 bits (14), Expect(19) = 5e-07
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 1903 aagtaataatacaa 1916
||||||||||||||
Sbjct: 243526 aagtaataatacaa 243539

Score = 28.2 bits (14), Expect(19) = 5e-07
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 2057 caaacctatgaatc 2070
||||||||||||||
Sbjct: 259975 caaacctatgaatc 259988

Score = 28.2 bits (14), Expect(19) = 5e-07
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 2914 taaaaaaggttttt 2927
||||||||||||||
Sbjct: 415253 taaaaaaggttttt 415266

Score = 28.2 bits (14), Expect(19) = 5e-07
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 3028 ctggtgaatcaagt 3041
||||||||||||||
Sbjct: 440569 ctggtgaatcaagt 440582

Score = 46.1 bits (23), Expect(11) = 5e-04
Identities = 32/35 (91%)
Strand = Plus / Plus


Query: 1706 ccaacaccaacaccaataccaacatcagcaacaac 1740
|||||||||||||||| ||||||| || |||||||
Sbjct: 306693 ccaacaccaacaccaacaccaacaacaacaacaac 306727

Score = 38.2 bits (19), Expect(11) = 5e-04
Identities = 22/23 (95%)
Strand = Plus / Plus


Query: 843 aaccacaatcacaaccacaacca 865
||||||||| |||||||||||||
Sbjct: 306451 aaccacaattacaaccacaacca 306473

Score = 34.2 bits (17), Expect(11) = 5e-04
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 1825 attaaataaaacaaatg 1841
|||||||||||||||||
Sbjct: 312999 attaaataaaacaaatg 313015

Score = 32.2 bits (16), Expect(11) = 5e-04
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 89 caacaacaacaaaata 104
||||||||||||||||
Sbjct: 235646 caacaacaacaaaata 235661

Score = 30.2 bits (15), Expect(11) = 5e-04
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 76 aaataatcatcatca 90
|||||||||||||||
Sbjct: 181294 aaataatcatcatca 181308

Score = 30.2 bits (15), Expect(11) = 5e-04
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 431 acaaatccaataccaaata 449
||||| |||||||||||||
Sbjct: 296539 acaaaaccaataccaaata 296557

Score = 30.2 bits (15), Expect(11) = 5e-04
Identities = 21/23 (91%)
Strand = Plus / Plus


Query: 2362 aaatattttaaattttacaaatt 2384
|||| |||||||||||| |||||
Sbjct: 412007 aaattttttaaattttaaaaatt 412029

Score = 30.2 bits (15), Expect(11) = 5e-04
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 2430 gtggtggtggtagta 2444
|||||||||||||||
Sbjct: 441013 gtggtggtggtagta 441027

Score = 30.2 bits (15), Expect(11) = 5e-04
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 2646 caaaattaaaatcaa 2660
|||||||||||||||
Sbjct: 493102 caaaattaaaatcaa 493116

Score = 30.2 bits (15), Expect(11) = 5e-04
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 2681 aaagatactttaata 2695
|||||||||||||||
Sbjct: 493299 aaagatactttaata 493313

Score = 28.2 bits (14), Expect(11) = 5e-04
Identities = 17/18 (94%)
Strand = Plus / Plus


Query: 2269 attattatttagattctt 2286
||||||||||| ||||||
Sbjct: 400661 attattatttaaattctt 400678

Score = 36.2 bits (18), Expect(18) = 8e-04
Identities = 21/22 (95%)
Strand = Plus / Minus


Query: 2420 agtaatgatagtggtggtggta 2441
||||||||||||||| ||||||
Sbjct: 386760 agtaatgatagtggtagtggta 386739

Score = 34.2 bits (17), Expect(18) = 8e-04
Identities = 20/21 (95%)
Strand = Plus / Minus


Query: 1709 acaccaacaccaataccaaca 1729
|||||||||||||| ||||||
Sbjct: 534894 acaccaacaccaattccaaca 534874

Score = 32.2 bits (16), Expect(18) = 8e-04
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 2725 atatggtaatggtaat 2740
||||||||||||||||
Sbjct: 323866 atatggtaatggtaat 323851

Score = 32.2 bits (16), Expect(18) = 8e-04
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 1770 tttttaaaacattaaa 1785
||||||||||||||||
Sbjct: 486406 tttttaaaacattaaa 486391

Score = 30.2 bits (15), Expect(18) = 8e-04
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 2918 aaaggtttttcaaat 2932
|||||||||||||||
Sbjct: 169729 aaaggtttttcaaat 169715

Score = 30.2 bits (15), Expect(18) = 8e-04
Identities = 18/19 (94%)
Strand = Plus / Minus


Query: 2704 tgataatgtaattaataat 2722
||||||| |||||||||||
Sbjct: 350888 tgataatataattaataat 350870

Score = 30.2 bits (15), Expect(18) = 8e-04
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 2658 caaatttaattgaat 2672
|||||||||||||||
Sbjct: 353046 caaatttaattgaat 353032

Score = 30.2 bits (15), Expect(18) = 8e-04
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 2643 taccaaaattaaaat 2657
|||||||||||||||
Sbjct: 385880 taccaaaattaaaat 385866

Score = 30.2 bits (15), Expect(18) = 8e-04
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 2144 tttaattctatcgaa 2158
|||||||||||||||
Sbjct: 448125 tttaattctatcgaa 448111

Score = 30.2 bits (15), Expect(18) = 8e-04
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 2099 aaaacaacatcattt 2113
|||||||||||||||
Sbjct: 480194 aaaacaacatcattt 480180

Score = 30.2 bits (15), Expect(18) = 8e-04
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 1750 taataatatacaaca 1764
|||||||||||||||
Sbjct: 486455 taataatatacaaca 486441

Score = 28.2 bits (14), Expect(18) = 8e-04
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 3620 tttttcaaagagat 3633
||||||||||||||
Sbjct: 88703 tttttcaaagagat 88690

Score = 28.2 bits (14), Expect(18) = 8e-04
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 3524 atttttaggttcaa 3537
||||||||||||||
Sbjct: 129775 atttttaggttcaa 129762

Score = 28.2 bits (14), Expect(18) = 8e-04
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 3137 aatgtttgaaaaga 3150
||||||||||||||
Sbjct: 135899 aatgtttgaaaaga 135886

Score = 28.2 bits (14), Expect(18) = 8e-04
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 2890 ggaattaaccattt 2903
||||||||||||||
Sbjct: 181177 ggaattaaccattt 181164

Score = 28.2 bits (14), Expect(18) = 8e-04
Identities = 20/22 (90%)
Strand = Plus / Minus


Query: 2743 attgaaatcattggaatcaatg 2764
||||||||||||| ||| ||||
Sbjct: 302065 attgaaatcattgaaattaatg 302044

Score = 28.2 bits (14), Expect(18) = 8e-04
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 2404 tattattattaata 2417
||||||||||||||
Sbjct: 435595 tattattattaata 435582

Score = 28.2 bits (14), Expect(18) = 8e-04
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 2291 caattattagaatt 2304
||||||||||||||
Sbjct: 438472 caattattagaatt 438459

Score = 36.2 bits (18), Expect(14) = 0.010
Identities = 21/22 (95%)
Strand = Plus / Minus


Query: 1540 atcaactacaactacaaccaca 1561
|||||| |||||||||||||||
Sbjct: 179086 atcaacaacaactacaaccaca 179065

Score = 36.2 bits (18), Expect(14) = 0.010
Identities = 24/26 (92%)
Strand = Plus / Minus


Query: 33 aattaaccacaaactcaaattcaaat 58
|||||| |||||| ||||||||||||
Sbjct: 375639 aattaaacacaaattcaaattcaaat 375614

Score = 34.2 bits (17), Expect(14) = 0.010
Identities = 17/17 (100%)
Strand = Plus / Minus


Query: 2401 tgatattattattaata 2417
|||||||||||||||||
Sbjct: 133743 tgatattattattaata 133727

Score = 32.2 bits (16), Expect(14) = 0.010
Identities = 19/20 (95%)
Strand = Plus / Minus


Query: 1172 acaacaacgacaacagcagt 1191
|||||||| |||||||||||
Sbjct: 202972 acaacaacaacaacagcagt 202953

Score = 32.2 bits (16), Expect(14) = 0.010
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 216 cagctaccaatgttgg 231
||||||||||||||||
Sbjct: 300443 cagctaccaatgttgg 300428

Score = 32.2 bits (16), Expect(14) = 0.010
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 89 caacaacaacaaaata 104
||||||||||||||||
Sbjct: 333718 caacaacaacaaaata 333703

Score = 30.2 bits (15), Expect(14) = 0.010
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 2588 aatcaattatttgaa 2602
|||||||||||||||
Sbjct: 56834 aatcaattatttgaa 56820

Score = 30.2 bits (15), Expect(14) = 0.010
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 2287 aaatcaattattaga 2301
|||||||||||||||
Sbjct: 167109 aaatcaattattaga 167095

Score = 30.2 bits (15), Expect(14) = 0.010
Identities = 30/35 (85%)
Strand = Plus / Minus


Query: 1707 caacaccaacaccaataccaacatcagcaacaaca 1741
||||| ||||| ||| | ||||| |||||||||||
Sbjct: 176586 caacagcaacagcaacagcaacaacagcaacaaca 176552

Score = 28.2 bits (14), Expect(14) = 0.010
Identities = 20/22 (90%)
Strand = Plus / Minus


Query: 2923 tttttcaaattgttttgaaaaa 2944
||||||||||| |||| |||||
Sbjct: 38766 tttttcaaattttttttaaaaa 38745

Score = 28.2 bits (14), Expect(14) = 0.010
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 2533 agaattattagaac 2546
||||||||||||||
Sbjct: 73691 agaattattagaac 73678

Score = 28.2 bits (14), Expect(14) = 0.010
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 2430 gtggtggtggtagt 2443
||||||||||||||
Sbjct: 112707 gtggtggtggtagt 112694

Score = 28.2 bits (14), Expect(14) = 0.010
Identities = 17/18 (94%)
Strand = Plus / Minus


Query: 2320 ttcaaaattctttgcaaa 2337
||||||||||||| ||||
Sbjct: 162763 ttcaaaattcttttcaaa 162746

Score = 28.2 bits (14), Expect(14) = 0.010
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 1123 attaaaatcatcaa 1136
||||||||||||||
Sbjct: 277797 attaaaatcatcaa 277784

Score = 38.2 bits (19), Expect(16) = 0.023
Identities = 19/19 (100%)
Strand = Plus / Minus


Query: 1539 tatcaactacaactacaac 1557
|||||||||||||||||||
Sbjct: 317673 tatcaactacaactacaac 317655

Score = 36.2 bits (18), Expect(16) = 0.023
Identities = 18/18 (100%)
Strand = Plus / Minus


Query: 2648 aaattaaaatcaaattta 2665
||||||||||||||||||
Sbjct: 230318 aaattaaaatcaaattta 230301

Score = 34.2 bits (17), Expect(16) = 0.023
Identities = 17/17 (100%)
Strand = Plus / Minus


Query: 2711 gtaattaataatgaata 2727
|||||||||||||||||
Sbjct: 137463 gtaattaataatgaata 137447

Score = 32.2 bits (16), Expect(16) = 0.023
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 2405 attattattaataaaa 2420
||||||||||||||||
Sbjct: 267515 attattattaataaaa 267500

Score = 32.2 bits (16), Expect(16) = 0.023
Identities = 22/24 (91%)
Strand = Plus / Minus


Query: 2379 caaattctttaattgaaaacgatg 2402
||||||||||||||| || |||||
Sbjct: 269326 caaattctttaattgcaatcgatg 269303

Score = 30.2 bits (15), Expect(16) = 0.023
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 2364 atattttaaatttta 2378
|||||||||||||||
Sbjct: 285227 atattttaaatttta 285213

Score = 28.2 bits (14), Expect(16) = 0.023
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 2925 tttcaaattgtttt 2938
||||||||||||||
Sbjct: 34351 tttcaaattgtttt 34338

Score = 28.2 bits (14), Expect(16) = 0.023
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 2727 atggtaatggtaat 2740
||||||||||||||
Sbjct: 37384 atggtaatggtaat 37371

Score = 28.2 bits (14), Expect(16) = 0.023
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 2629 aacaagaaaattta 2642
||||||||||||||
Sbjct: 234375 aacaagaaaattta 234362

Score = 28.2 bits (14), Expect(16) = 0.023
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 1836 caaatgaaattaaa 1849
||||||||||||||
Sbjct: 315208 caaatgaaattaaa 315195

Score = 28.2 bits (14), Expect(16) = 0.023
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 1359 atcaacaattaaat 1372
||||||||||||||
Sbjct: 317837 atcaacaattaaat 317824

Score = 28.2 bits (14), Expect(16) = 0.023
Identities = 17/18 (94%)
Strand = Plus / Minus


Query: 1337 ataaaaacagcattacca 1354
||||| ||||||||||||
Sbjct: 343791 ataaacacagcattacca 343774

Score = 28.2 bits (14), Expect(16) = 0.023
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 1197 catcaattcaaaga 1210
||||||||||||||
Sbjct: 345276 catcaattcaaaga 345263

Score = 28.2 bits (14), Expect(16) = 0.023
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 447 atataatattgaaa 460
||||||||||||||
Sbjct: 387664 atataatattgaaa 387651

Score = 28.2 bits (14), Expect(16) = 0.023
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 89 caacaacaacaaaa 102
||||||||||||||
Sbjct: 392093 caacaacaacaaaa 392080

Score = 28.2 bits (14), Expect(16) = 0.023
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 80 aatcatcatcaaca 93
||||||||||||||
Sbjct: 394484 aatcatcatcaaca 394471

Score = 42.1 bits (21), Expect(16) = 0.061
Identities = 27/29 (93%)
Strand = Plus / Plus


Query: 1704 caccaacaccaacaccaataccaacatca 1732
||||||||| |||||||||||| ||||||
Sbjct: 149087 caccaacacaaacaccaatacctacatca 149115

Score = 34.2 bits (17), Expect(16) = 0.061
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 1242 ttcctttatcatcagaaccattaat 1266
|||||||||||||| ||| ||||||
Sbjct: 144257 ttcctttatcatcacaactattaat 144281

Score = 32.2 bits (16), Expect(16) = 0.061
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 2581 aaatcaaaatcaatta 2596
||||||||||||||||
Sbjct: 262109 aaatcaaaatcaatta 262124

Score = 32.2 bits (16), Expect(16) = 0.061
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 2657 tcaaatttaattgaat 2672
||||||||||||||||
Sbjct: 291394 tcaaatttaattgaat 291409

Score = 30.2 bits (15), Expect(16) = 0.061
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 2287 aaatcaattattaga 2301
|||||||||||||||
Sbjct: 149844 aaatcaattattaga 149858

Score = 30.2 bits (15), Expect(16) = 0.061
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 2647 aaaattaaaatcaaa 2661
|||||||||||||||
Sbjct: 270036 aaaattaaaatcaaa 270050

Score = 28.2 bits (14), Expect(16) = 0.061
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 77 aataatcatcatca 90
||||||||||||||
Sbjct: 37514 aataatcatcatca 37527

Score = 28.2 bits (14), Expect(16) = 0.061
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 89 caacaacaacaaaa 102
||||||||||||||
Sbjct: 109427 caacaacaacaaaa 109440

Score = 28.2 bits (14), Expect(16) = 0.061
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 126 caaattcaatacca 139
||||||||||||||
Sbjct: 117685 caaattcaatacca 117698

Score = 28.2 bits (14), Expect(16) = 0.061
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 546 taccatttggtaat 559
||||||||||||||
Sbjct: 131256 taccatttggtaat 131269

Score = 28.2 bits (14), Expect(16) = 0.061
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 2301 aattggatccaatt 2314
||||||||||||||
Sbjct: 175922 aattggatccaatt 175935

Score = 28.2 bits (14), Expect(16) = 0.061
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 2401 tgatattattatta 2414
||||||||||||||
Sbjct: 213534 tgatattattatta 213547

Score = 28.2 bits (14), Expect(16) = 0.061
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 2411 attaataaaagtaa 2424
||||||||||||||
Sbjct: 250626 attaataaaagtaa 250639

Score = 28.2 bits (14), Expect(16) = 0.061
Identities = 17/18 (94%)
Strand = Plus / Plus


Query: 2705 gataatgtaattaataat 2722
|||||| |||||||||||
Sbjct: 293272 gataatataattaataat 293289

Score = 28.2 bits (14), Expect(16) = 0.061
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 2951 atcaattgaaattt 2964
||||||||||||||
Sbjct: 322024 atcaattgaaattt 322037

Score = 28.2 bits (14), Expect(16) = 0.061
Identities = 20/22 (90%)
Strand = Plus / Plus


Query: 3046 catttgaaatttcagaattatt 3067
|||||||||||| | |||||||
Sbjct: 401464 catttgaaatttgaaaattatt 401485

Score = 50.1 bits (25), Expect = 0.61
Identities = 34/37 (91%)
Strand = Plus / Minus


Query: 1705 accaacaccaacaccaataccaacatcagcaacaaca 1741
||||||||||||||||| |||||||||| || |||||
Sbjct: 105937 accaacaccaacaccaacaccaacatcaacaccaaca 105901

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 4,310,509,645
Number of extensions: 277164958
Number of successful extensions: 24192062
Number of sequences better than 10.0: 1306
Length of query: 3658
Length of database: 95,242,211,685
Length adjustment: 25
Effective length of query: 3633
Effective length of database: 97,216,030,006
Effective search space: 353185837011798
Effective search space used: 353185837011798
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 6.29
Homology vs Protein
Query= Contig-U11332-1 (Contig-U11332-1Q) /CSM_Contig/Contig-U11332-1Q.Seq.d
(3658 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

CP001324_457(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 48 0.002
AK129265_1(AK129265|pid:none) Mus musculus premature mRNA for mK... 45 0.015
(P59438) RecName: Full=Hermansky-Pudlak syndrome 5 protein homol... 45 0.015
AF534398_1(AF534398|pid:none) Mus musculus HPS5 protein isoform ... 45 0.015
AF534399_1(AF534399|pid:none) Mus musculus HPS5 protein isoform ... 45 0.015
AL844509_583(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 44 0.057
AY089625_1(AY089625|pid:none) Drosophila melanogaster RE38137 fu... 43 0.096
AC116982_8(AC116982|pid:none) Dictyostelium discoideum chromosom... 42 0.16
AL844506_105(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 41 0.28
(Q297N8) RecName: Full=Hermansky-Pudlak syndrome 5 protein homol... 41 0.28
AK291663_1(AK291663|pid:none) Homo sapiens cDNA FLJ78666 complet... 41 0.37
AB463066_1(AB463066|pid:none) Synthetic construct DNA, clone: pF... 41 0.37
(Q9UPZ3) RecName: Full=Hermansky-Pudlak syndrome 5 protein; AltN... 41 0.37
AF534402_1(AF534402|pid:none) Homo sapiens HPS5 protein minor fo... 41 0.37
CP000589_44(CP000589|pid:none) Ostreococcus lucimarinus CCE9901 ... 41 0.37
BC033640_1(BC033640|pid:none) Homo sapiens Hermansky-Pudlak synd... 41 0.37
AK292436_1(AK292436|pid:none) Homo sapiens cDNA FLJ78758 complet... 41 0.37
AB062963_1(AB062963|pid:none) Macaca fascicularis brain cDNA clo... 40 0.48
AE014186_457(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.48
CP001357_1627(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 40 0.48
AP008971_685(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 40 0.48
BT052911_1(BT052911|pid:none) Medicago truncatula clone MTYFL_FM... 40 0.62
AY057581_1(AY057581|pid:none) Arabidopsis thaliana putative 2,3-... 40 0.62
AY045627_1(AY045627|pid:none) Arabidopsis thaliana At1g09780/F21... 40 0.62
AE014186_384(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.63
AE014185_311(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.63
AE014187_167(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.63
FM992692_306(FM992692|pid:none) Candida dubliniensis CD36 chromo... 40 0.63
BC068753_1(BC068753|pid:none) Xenopus laevis hypothetical protei... 40 0.82
AY426251_1(AY426251|pid:none) Tetrahymena thermophila strain B p... 40 0.82
BC128613_1(BC128613|pid:none) Danio rerio cDNA clone IMAGE:70525... 39 1.1
U55854_11(U55854|pid:none) Caenorhabditis elegans cosmid C04G6, ... 39 1.1
U55854_12(U55854|pid:none) Caenorhabditis elegans cosmid C04G6, ... 39 1.1
T29599(T29599)hypothetical protein C04G6.1 - Caenorhabditis eleg... 39 1.1
CT005255_67(CT005255|pid:none) Leishmania major strain Friedlin,... 39 1.4
AB002327_1(AB002327|pid:none) Homo sapiens mRNA for KIAA0329 gen... 39 1.4
AB002295_1(AB002295|pid:none) Human mRNA for KIAA0297 gene, part... 39 1.4
AB385308_1(AB385308|pid:none) Synthetic construct DNA, clone: pF... 39 1.4
AK127721_1(AK127721|pid:none) Homo sapiens cDNA FLJ45821 fis, cl... 39 1.4
CP000589_371(CP000589|pid:none) Ostreococcus lucimarinus CCE9901... 39 1.8
AL845481_5(AL845481|pid:none) Zebrafish DNA sequence from clone ... 39 1.8
T29620(T29620) hypothetical protein R10A10.2 - Caenorhabditis el... 38 2.4
CP000585_392(CP000585|pid:none) Ostreococcus lucimarinus CCE9901... 38 2.4
AM494953_64(AM494953|pid:none) Leishmania braziliensis chromosom... 38 2.4
AJ833642_1(AJ833642|pid:none) Coffea canephora partial mRNA for ... 38 2.4
BT000692_1(BT000692|pid:none) Arabidopsis thaliana clone RAFL08-... 38 3.1
AL844505_35(AL844505|pid:none) Plasmodium falciparum 3D7 chromos... 38 3.1
AE014185_210(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 38 3.1
AE014188_491(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 38 3.1
BC082542_1(BC082542|pid:none) Mus musculus Hermansky-Pudlak synd... 37 4.1
AL844509_172(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 37 4.1
EF156759_1(EF156759|pid:none) Catharanthus roseus putative MAPK2... 37 5.3
AK129113_1(AK129113|pid:none) Mus musculus mRNA for mKIAA0297 pr... 37 5.3
AB011494_2(AB011494|pid:none) Torque teno virus genes for hypoth... 37 5.3
BC138354_1(BC138354|pid:none) Mus musculus RIKEN cDNA 4930573I19... 37 5.3
(Q40517) RecName: Full=Mitogen-activated protein kinase homolog ... 37 6.9
(Q40884) RecName: Full=Mitogen-activated protein kinase homolog ... 37 6.9
AF529238_1(AF529238|pid:none) Cucumis sativus Trichoderma-induce... 37 6.9
AL844507_266(AL844507|pid:none) Plasmodium falciparum 3D7 chromo... 37 6.9
(Q559G8) RecName: Full=Molybdenum cofactor sulfurase; S... 37 6.9
CP000721_3457(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 37 6.9
EF121308_1(EF121308|pid:none) Nicotiana attenuata mitogen-activa... 37 6.9
DQ118734_1(DQ118734|pid:none) Cucumis sativus cultivar Kfir Tric... 37 6.9
BT082200_1(BT082200|pid:none) Anoplopoma fimbria clone afim-evh-... 36 9.0
T26318(T26318)hypothetical protein W09G3.1 - Caenorhabditis eleg... 36 9.0
AY486158_1(AY486158|pid:none) Zea mays MAPK mRNA, partial cds. 36 9.0
AE014186_182(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 36 9.0
BT038103_1(BT038103|pid:none) Zea mays full-length cDNA clone ZM... 36 9.0
AE010300_4352(AE010300|pid:none) Leptospira interrogans serovar ... 36 9.0
D21839_1(D21839|pid:none) Arabidopsis thaliana mRNA for MAP kina... 36 9.0
(Q39023) RecName: Full=Mitogen-activated protein kinase 3; ... 36 9.0
EU675864_1(EU675864|pid:none) Oryza sativa Indica Group mitogen ... 36 9.0
(Q6Z437) RecName: Full=Mitogen-activated protein kinase 3; ... 36 9.0

>CP001324_457(CP001324|pid:none) Micromonas sp. RCC299 chromosome 3,
complete sequence.
Length = 1175

Score = 48.1 bits (113), Expect = 0.002
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3

Query: 3447 WGVETELSTGSCPICTLSLAENPESSFLG-STPATIIVFPNCGHSYHHCCIEDQGCMLC 3620
WGV LST C C L L E S G S+ ++ FP CGH+ H CC + C+ C
Sbjct: 1089 WGVRVPLSTACCARCALPLREIRWSGDAGQSSLGRLVTFP-CGHTLHECCAIEDACVEC 1146

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 4,004,477,457
Number of extensions: 66055536
Number of successful extensions: 184767
Number of sequences better than 10.0: 73
Number of HSP's gapped: 184568
Number of HSP's successfully gapped: 74
Length of query: 1219
Length of database: 1,040,966,779
Length adjustment: 140
Effective length of query: 1079
Effective length of database: 592,366,879
Effective search space: 639163862441
Effective search space used: 639163862441
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.41 alm: 0.36 top: 0.53 tms: 0.00 mit: 0.46 mip: 0.19
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

64.0 %: mitochondrial
24.0 %: nuclear
8.0 %: cytoplasmic
4.0 %: cytoskeletal

>> prediction for Contig-U11332-1 is mit

VS (DIR, S) 0
VH (FL, L) 13
VF (FL, S) 3
AH (FL, L) 9
AF (FL, S) 1
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 4
SF (FL, S) 2
CH (FL, L) 18
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0