Contig-U11332-1 |
Contig ID |
Contig-U11332-1 |
Contig update |
2002.12.18 |
Contig sequence |
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Gap |
gap included |
Contig length |
3648 |
Chromosome number (1..6, M) |
2 |
Chromosome length |
8467578 |
Start point |
3571051 |
End point |
3574669 |
Strand (PLUS/MINUS) |
PLUS |
Number of clones |
52 |
Number of EST |
66 |
Link to clone list |
U11332 |
List of clone(s) |
est1=CHH523F,1,605 est2=SFH356Z,42,570 est3=VFK294F,70,695 est4=VHL309F,447,1046 est5=VFJ386E,471,1490 est6=VHL355Z,562,1105 est7=SHC156F,590,1177 est8=CHQ609F,592,1239 est9=AHI664F,604,1256 est10=AHI845F,605,1254 est11=AHM678Z,628,1119 est12=CHG631Z,729,1304 est13=CHQ829Z,734,1352 est14=AHD713Z,739,1320 est15=CHN340Z,763,1323 est16=VHL260Z,779,1317 est17=CHF244Z,782,1322 est18=CHB145Z,783,1313 est19=AHO893Z,789,1157 est20=AFK416Z,803,1313 est21=AHM569Z,803,1358 est22=VHO208Z,803,1325 est23=CHI287Z,806,1314 est24=CHN655F,807,1290 est25=CHN341Z,812,1323 est26=CHR387Z,815,1300 est27=VHO754Z,815,1339 est28=VHI149Z,822,1309 est29=AHR287Z,826,1301 est30=CHS251Z,826,1335 est31=CHH511Z,828,1298 est32=CHJ375Z,845,1319 est33=VHF262Z,862,1385 est34=VHF180Z,863,1089 est35=VHE739Z,864,1320 est36=CHK680Z,914,1322 est37=VHH169Z,952,1316 est38=AHF529F,967,1617 est39=VHM791Z,978,1498 est40=SHJ625Z,1017,1473 est41=SHK834F,1071,1689 est42=VHL309Z,1078,1667 est43=CHS417F,1109,1726 est44=AHE366Z,1113,1718 est45=SFB828Z,1183,1557 est46=VFK294Z,1196,1634 est47=VHK337Z,1203,1310 est48=VHN386Z,1346,1891 est49=CHG701F,1486,2158 est50=CHH523Z,1741,1936 est51=AHI845Z,2159,2918 est52=VFE776F,2221,2722 est53=CFD191F,2309,2967 est54=AHI664Z,2808,3619 est55=SHK834Z,2843,3577 est56=CHS417Z,2884,3590 est57=AHF529Z,2886,3586 est58=CHQ609Z,2887,3606 est59=CHS203Z,2890,3614 est60=SHC156Z,2890,3585 est61=CHN655Z,2895,3600 est62=CHG701Z,2933,3590 est63=VFE776Z,2990,3585 est64=SLG280Z,3055,3649 est65=CFD191Z,3104,3589 est66=SHH179Z,3160,3477
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Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.10 |
Homology vs CSM-cDNA |
|
dna update |
2008.11.23 |
Homology vs DNA |
Query= Contig-U11332-1 (Contig-U11332-1Q) /CSM_Contig/Contig-U11332-1Q.Seq.d (3658 letters)
Database: ddbj_A 92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 1552 0.0 1 (BJ404488) Dictyostelium discoideum cDNA clone:dds28o13, 3' ... 1372 0.0 1 (BJ386380) Dictyostelium discoideum cDNA clone:ddc58e02, 3' ... 1314 0.0 2 (BJ384495) Dictyostelium discoideum cDNA clone:ddc49m14, 3' ... 1310 0.0 1 (BJ385445) Dictyostelium discoideum cDNA clone:ddc55a04, 3' ... 1300 0.0 2 (BJ379477) Dictyostelium discoideum cDNA clone:ddc35b01, 3' ... 1294 0.0 1 (BJ351188) Dictyostelium discoideum cDNA clone:dda42i07, 3' ... 1292 0.0 2 (BJ386370) Dictyostelium discoideum cDNA clone:ddc58b06, 3' ... 1283 0.0 2 (BJ408273) Dictyostelium discoideum cDNA clone:dds45d10, 3' ... 1245 0.0 3 (BJ353018) Dictyostelium discoideum cDNA clone:dda48o16, 3' ... 1245 0.0 4 (BJ415231) Dictyostelium discoideum cDNA clone:ddv21k24, 5' ... 1241 0.0 1 (BJ365953) Dictyostelium discoideum cDNA clone:ddc37m05, 5' ... 1199 0.0 1 (BJ428125) Dictyostelium discoideum cDNA clone:ddv10h19, 3' ... 1181 0.0 1 (AU039731) Dictyostelium discoideum slug cDNA, clone SLG280. 1128 0.0 1 (BJ400987) Dictyostelium discoideum cDNA clone:dds15p13, 3' ... 1049 0.0 1 (BJ360774) Dictyostelium discoideum cDNA clone:ddc7e23, 5' e... 823 0.0 3 (BJ424609) Dictyostelium discoideum cDNA clone:ddv53b03, 5' ... 668 0.0 2 (BJ414630) Dictyostelium discoideum cDNA clone:ddv19l21, 5' ... 620 0.0 2 (BJ352926) Dictyostelium discoideum cDNA clone:dda48j12, 3' ... 555 0.0 5 (BJ370678) Dictyostelium discoideum cDNA clone:ddc55a04, 5' ... 515 0.0 3 (BJ335038) Dictyostelium discoideum cDNA clone:dda48o16, 5' ... 515 0.0 3 (BJ334951) Dictyostelium discoideum cDNA clone:dda48j12, 5' ... 515 0.0 3 (BJ333343) Dictyostelium discoideum cDNA clone:dda42i07, 5' ... 585 0.0 4 (BJ385560) Dictyostelium discoideum cDNA clone:ddc55j08, 3' ... 515 0.0 4 (BJ392720) Dictyostelium discoideum cDNA clone:dds28o13, 5' ... 515 0.0 3 (BJ432806) Dictyostelium discoideum cDNA clone:ddv19l21, 3' ... 585 0.0 2 (BJ355375) Dictyostelium discoideum cDNA clone:dda56i17, 3' ... 515 0.0 2 (BJ349932) Dictyostelium discoideum cDNA clone:dda38j03, 3' ... 515 0.0 3 (BJ379607) Dictyostelium discoideum cDNA clone:ddc35m08, 3' ... 513 0.0 3 (BJ365334) Dictyostelium discoideum cDNA clone:ddc35b01, 5' ... 488 0.0 5 (BJ439798) Dictyostelium discoideum cDNA clone:ddv41k16, 3' ... 515 0.0 2 (BJ445346) Dictyostelium discoideum cDNA clone:ddv59o02, 3' ... 515 0.0 2 (BJ443661) Dictyostelium discoideum cDNA clone:ddv53n13, 3' ... 515 0.0 2 (BJ384160) Dictyostelium discoideum cDNA clone:ddc48p09, 3' ... 515 0.0 2 (BJ445787) Dictyostelium discoideum cDNA clone:ddv60l13, 3' ... 509 0.0 2 (BJ386526) Dictyostelium discoideum cDNA clone:ddc58e14, 3' ... 478 0.0 2 (BJ378627) Dictyostelium discoideum cDNA clone:ddc32g12, 3' ... 504 0.0 2 (BJ384097) Dictyostelium discoideum cDNA clone:ddc48b11, 3' ... 496 0.0 2 (BJ344984) Dictyostelium discoideum cDNA clone:dda21p04, 3' ... 507 0.0 2 (BJ350345) Dictyostelium discoideum cDNA clone:dda39d17, 3' ... 577 0.0 5 (BJ441676) Dictyostelium discoideum cDNA clone:ddv47a13, 3' ... 515 0.0 2 (BJ377384) Dictyostelium discoideum cDNA clone:ddc24i11, 3' ... 490 0.0 2 (BJ386030) Dictyostelium discoideum cDNA clone:ddc56n21, 3' ... 513 0.0 2 (BJ358156) Dictyostelium discoideum cDNA clone:dda65m22, 3' ... 507 0.0 2 (BJ443631) Dictyostelium discoideum cDNA clone:ddv53g16, 3' ... 490 0.0 2 (BJ397159) Dictyostelium discoideum cDNA clone:dds45d10, 5' ... 585 0.0 4 (BJ369193) Dictyostelium discoideum cDNA clone:ddc49m14, 5' ... 515 0.0 2 (BJ374437) Dictyostelium discoideum cDNA clone:ddc7e23, 3' e... 735 0.0 4 (BJ371438) Dictyostelium discoideum cDNA clone:ddc58b06, 5' ... 551 0.0 7 (BJ443464) Dictyostelium discoideum cDNA clone:ddv53b03, 3' ... 585 0.0 4 (BJ439428) Dictyostelium discoideum cDNA clone:ddv40n09, 3' ... 424 0.0 2 (BJ380670) Dictyostelium discoideum cDNA clone:ddc38m22, 3' ... 470 0.0 2 (BJ380110) Dictyostelium discoideum cDNA clone:ddc37e03, 3' ... 466 0.0 2 (BJ409996) Dictyostelium discoideum cDNA clone:ddv10h19, 5' ... 404 0.0 3 (BJ358288) Dictyostelium discoideum cDNA clone:dda56k20, 3' ... 515 0.0 2 (BJ444578) Dictyostelium discoideum cDNA clone:ddv56f23, 3' ... 585 0.0 3 (BJ444930) Dictyostelium discoideum cDNA clone:ddv57l21, 3' ... 404 0.0 5 (BJ381216) Dictyostelium discoideum cDNA clone:ddc40f19, 3' ... 398 0.0 2 (BJ382118) Dictyostelium discoideum cDNA clone:ddc43o20, 3' ... 410 0.0 2 (BJ433443) Dictyostelium discoideum cDNA clone:ddv21k24, 3' ... 266 e-170 4 (BJ441080) Dictyostelium discoideum cDNA clone:ddv45i17, 3' ... 379 e-170 2 (BJ407654) Dictyostelium discoideum cDNA clone:dds43a08, 3' ... 579 e-160 1 (BJ356615) Dictyostelium discoideum cDNA clone:dda60j24, 3' ... 515 e-160 2 (BJ407549) Dictyostelium discoideum cDNA clone:dds38m19, 3' ... 561 e-155 1 (BJ399139) Dictyostelium discoideum cDNA clone:dds4h08, 3' e... 442 e-135 2 (BJ439881) Dictyostelium discoideum cDNA clone:ddv41o19, 3' ... 410 e-109 1 (BJ380144) Dictyostelium discoideum cDNA clone:ddc37m05, 3' ... 361 1e-94 1 (BJ442927) Dictyostelium discoideum cDNA clone:ddv51j09, 3' ... 184 2e-41 1 (AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 44 2e-11 19 (AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 38 3e-10 24 (AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 46 1e-08 21 (AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 38 1e-08 22 (AC116032) Dictyostelium discoideum chromosome 2 map 4158743... 52 7e-08 10 (AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 46 1e-07 22 (AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 36 2e-06 19 (AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 52 4e-06 12 (AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 40 5e-06 22 (AM398681) Flavobacterium psychrophilum JIP02/86 complete ge... 42 5e-06 29 (AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 48 2e-05 13 (AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 38 3e-05 20 (CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 42 1e-04 24 (AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 48 2e-04 18 (AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 42 2e-04 22 (AC115680) Dictyostelium discoideum chromosome 2 map 4915084... 52 3e-04 13 (AF129455) Simian immunodeficiency virus clone SIV1480-AconV... 60 6e-04 1 (I52145) Sequence 25 from patent US 5646029. 60 6e-04 1 (AR051971) Sequence 25 from patent US 5830747. 60 6e-04 1 (FH942319) CHO_OF6731xp12f1.ab1 CHO_OF6 Nicotiana tabacum ge... 60 6e-04 1 (FH469705) CHO_OF4966xa22f1.ab1 CHO_OF4 Nicotiana tabacum ge... 60 6e-04 1 (FH184222) CHO_OF3426xe06r1.ab1 CHO_OF3 Nicotiana tabacum ge... 60 6e-04 1 (FG639194) TT-17_F09 Burley21 trichome library Nicotiana tab... 60 6e-04 1 (FG169650) AGN_RNC003xm02f1.ab1 AGN_RNC Nicotiana tabacum cD... 60 6e-04 1 (FG144584) AGN_RPC015xj17f1.ab1 AGN_RPC Nicotiana tabacum cD... 60 6e-04 1 (FG141435) AGN_RPC025xj03f1.ab1 AGN_RPC Nicotiana tabacum cD... 60 6e-04 1 (AF111942) Dictyostelium discoideum AX4 development protein ... 44 6e-04 5 (EX846519) CBNC6435.fwd CBNC Phycomyces blakesleeanus NRRL15... 56 7e-04 2 (AU053723) Dictyostelium discoideum slug cDNA, clone SLJ555. 38 0.001 4 (AJ277590) Dictyostelium discoideum iplA gene for inositol 1... 36 0.002 8 (EY700345) CS00-C3-700-093-E08-CT.F Sweet orange fruit, deve... 38 0.002 3 (AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 40 0.002 16
>(AC116984) Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence. Length = 541399
Score = 1552 bits (783), Expect = 0.0 Identities = 783/783 (100%) Strand = Plus / Minus
Query: 1 aataacaaatacacaactacaccaggatattcaattaaccacaaactcaaattcaaattc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178635 aataacaaatacacaactacaccaggatattcaattaaccacaaactcaaattcaaattc 178576
Query: 61 gaataattcgtcattaaataatcatcatcaacaacaacaaaatattgtacatactatacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178575 gaataattcgtcattaaataatcatcatcaacaacaacaaaatattgtacatactatacc 178516
Query: 121 aataacaaattcaataccaccagtaaactcaatcactatttcaatattagcaagcacatt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178515 aataacaaattcaataccaccagtaaactcaatcactatttcaatattagcaagcacatt 178456
Query: 181 aaccaaatcgatagttgtaaattttcaaatactaacagctaccaatgttggtaaagtatt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178455 aaccaaatcgatagttgtaaattttcaaatactaacagctaccaatgttggtaaagtatt 178396
Query: 241 gagtatcattcaaattggtaagaaacaacgtgagaatactaaacagggtgcttgttttca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178395 gagtatcattcaaattggtaagaaacaacgtgagaatactaaacagggtgcttgttttca 178336
Query: 301 cccattttataaatcctctgtttacacatcaagacctggcaaaagattatggttagccga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178335 cccattttataaatcctctgtttacacatcaagacctggcaaaagattatggttagccga 178276
Query: 361 tccaattgatggtcgtgttttatcgactatgaatttcacaccatcctcaaccacaaacga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178275 tccaattgatggtcgtgttttatcgactatgaatttcacaccatcctcaaccacaaacga 178216
Query: 421 agatggtactacaaatccaataccaaatataatattgaaaccaaaaccattaatatcttc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178215 agatggtactacaaatccaataccaaatataatattgaaaccaaaaccattaatatcttc 178156
Query: 481 aaattcatccaatgatgcaaatacttatctcactggtaaattcccaatgatattctcaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178155 aaattcatccaatgatgcaaatacttatctcactggtaaattcccaatgatattctcaaa 178096
Query: 541 gttattaccatttggtaattacttaatatcatatgatgaattatcattactcttaatcga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178095 gttattaccatttggtaattacttaatatcatatgatgaattatcattactcttaatcga 178036
Query: 601 tgttaatgaagttgaagttttagaatggaaattagatacaaatcaaattcatgacttggt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178035 tgttaatgaagttgaagttttagaatggaaattagatacaaatcaaattcatgacttggt 177976
Query: 661 tgtttatcatgattcaatctatgcattacatggtcaaaatcattctatctctagaatttt 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177975 tgtttatcatgattcaatctatgcattacatggtcaaaatcattctatctctagaatttt 177916
Query: 721 cacttcaattcctttagaaattttaccaactcctcaagaattacaagaacaatctgatca 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177915 cacttcaattcctttagaaattttaccaactcctcaagaattacaagaacaatctgatca 177856
Query: 781 att 783 ||| Sbjct: 177855 att 177853
Score = 1374 bits (693), Expect(2) = 0.0 Identities = 693/693 (100%) Strand = Plus / Minus
Query: 2941 aaaatagtacatcaattgaaatttggtcaaatactttagaaattatgaaacaattaagaa 3000 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175296 aaaatagtacatcaattgaaatttggtcaaatactttagaaattatgaaacaattaagaa 175237
Query: 3001 ttgatcaacatgaaaatgaagatcaatctggtgaatcaagtattacatttgaaatttcag 3060 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175236 ttgatcaacatgaaaatgaagatcaatctggtgaatcaagtattacatttgaaatttcag 175177
Query: 3061 aattatttatattggatttaattggtaaagcaattggtccattggaaactattgaattgg 3120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175176 aattatttatattggatttaattggtaaagcaattggtccattggaaactattgaattgg 175117
Query: 3121 tttgcaaattttcagaaatgtttgaaaagagtaaaattgaaactaaattattatcagatt 3180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175116 tttgcaaattttcagaaatgtttgaaaagagtaaaattgaaactaaattattatcagatt 175057
Query: 3181 ggattaaatttggaaaatggtcgttgtatgatagaccaaagttatcatatgatatcttat 3240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175056 ggattaaatttggaaaatggtcgttgtatgatagaccaaagttatcatatgatatcttat 174997
Query: 3241 cacttttggatagtcatttatggttaaagaaacccttgaccatttcacctcaattcttaa 3300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174996 cacttttggatagtcatttatggttaaagaaacccttgaccatttcacctcaattcttaa 174937
Query: 3301 ctatgattggtcctgaattggacccaactttaccaaataatccattcaaagaattcttta 3360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174936 ctatgattggtcctgaattggacccaactttaccaaataatccattcaaagaattcttta 174877
Query: 3361 ataaacttggaacttcaagtcatgatagtggtgataatatcgattttaaaataccttcat 3420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174876 ataaacttggaacttcaagtcatgatagtggtgataatatcgattttaaaataccttcat 174817
Query: 3421 tctttgaagataattcacgtagacattggggtgtagaaactgaattatcaactggttctt 3480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174816 tctttgaagataattcacgtagacattggggtgtagaaactgaattatcaactggttctt 174757
Query: 3481 gtccaatttgtaccttatctttagctgaaaatcctgaatcttcatttttaggttcaacac 3540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174756 gtccaatttgtaccttatctttagctgaaaatcctgaatcttcatttttaggttcaacac 174697
Query: 3541 ccgctacaattatagtattcccaaattgtggtcattcatatcatcattgttgtattgaag 3600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174696 ccgctacaattatagtattcccaaattgtggtcattcatatcatcattgttgtattgaag 174637
Query: 3601 atcaaggttgtatgttatgtttttcaaagagat 3633 ||||||||||||||||||||||||||||||||| Sbjct: 174636 atcaaggttgtatgttatgtttttcaaagagat 174604
Score = 823 bits (415), Expect(2) = 0.0 Identities = 415/415 (100%) Strand = Plus / Minus
Query: 2529 cactagaattattagaacaatggttcctttcaaatttaatgaataataaaccaaatcaaa 2588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175707 cactagaattattagaacaatggttcctttcaaatttaatgaataataaaccaaatcaaa 175648
Query: 2589 atcaattatttgaagaaagagaagatatgtcaacaacatcaacaagaaaatttataccaa 2648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175647 atcaattatttgaagaaagagaagatatgtcaacaacatcaacaagaaaatttataccaa 175588
Query: 2649 aattaaaatcaaatttaattgaatggaaatcaaaagatactttaatacaaattattgata 2708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175587 aattaaaatcaaatttaattgaatggaaatcaaaagatactttaatacaaattattgata 175528
Query: 2709 atgtaattaataatgaatatggtaatggtaatttattgaaatcattggaatcaatgtctg 2768 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175527 atgtaattaataatgaatatggtaatggtaatttattgaaatcattggaatcaatgtctg 175468
Query: 2769 ctgaaaatggttttcatattggcctttataaaatttatgaacattatttcaaaaatgttt 2828 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175467 ctgaaaatggttttcatattggcctttataaaatttatgaacattatttcaaaaatgttt 175408
Query: 2829 attctatgaaatccattttacataatcaagaacaattgaatcattattcaaagaaactct 2888 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175407 attctatgaaatccattttacataatcaagaacaattgaatcattattcaaagaaactct 175348
Query: 2889 tggaattaaccattttcactgatgataaaaaaggtttttcaaattgttttgaaaa 2943 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175347 tggaattaaccattttcactgatgataaaaaaggtttttcaaattgttttgaaaa 175293
Score = 585 bits (295), Expect(19) = 0.0 Identities = 295/295 (100%) Strand = Plus / Minus
Query: 1116 cttcatcattaaaatcatcaactgatcaattcgttgatgataaattattggatagtacaa 1175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177408 cttcatcattaaaatcatcaactgatcaattcgttgatgataaattattggatagtacaa 177349
Query: 1176 caacgacaacagcagttgaaacatcaattcaaagagtagcatcaaaagaatgtattttct 1235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177348 caacgacaacagcagttgaaacatcaattcaaagagtagcatcaaaagaatgtattttct 177289
Query: 1236 cagatattcctttatcatcagaaccattaatggtatcaacaagtgttaaagatccaactt 1295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177288 cagatattcctttatcatcagaaccattaatggtatcaacaagtgttaaagatccaactt 177229
Query: 1296 tagctgcatcaacaactagaaaggttataaagaaaaaggttataaaaacagcattaccac 1355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177228 tagctgcatcaacaactagaaaggttataaagaaaaaggttataaaaacagcattaccac 177169
Query: 1356 aggatcaacaattaaatggaacaaataatacagcaactctatcaacttcaccacc 1410 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177168 aggatcaacaattaaatggaacaaataatacagcaactctatcaacttcaccacc 177114
Score = 555 bits (280), Expect(19) = 0.0 Identities = 280/280 (100%) Strand = Plus / Minus
Query: 2169 aagaatcaaagataatctcaaccatttatcaattcattgattcttcagattcttcaactt 2228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176067 aagaatcaaagataatctcaaccatttatcaattcattgattcttcagattcttcaactt 176008
Query: 2229 gtttaacattattggatagtcattgttcaaatgattatggattattatttagattcttaa 2288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176007 gtttaacattattggatagtcattgttcaaatgattatggattattatttagattcttaa 175948
Query: 2289 atcaattattagaattggatccaattgaatcttcaaaattctttgcaaaacatttcccaa 2348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175947 atcaattattagaattggatccaattgaatcttcaaaattctttgcaaaacatttcccaa 175888
Query: 2349 ttatattaccaagaaatattttaaattttacaaattctttaattgaaaacgatgatatta 2408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175887 ttatattaccaagaaatattttaaattttacaaattctttaattgaaaacgatgatatta 175828
Query: 2409 ttattaataaaagtaatgatagtggtggtggtagtagaag 2448 |||||||||||||||||||||||||||||||||||||||| Sbjct: 175827 ttattaataaaagtaatgatagtggtggtggtagtagaag 175788
Score = 488 bits (246), Expect(19) = 0.0 Identities = 246/246 (100%) Strand = Plus / Minus
Query: 1688 gaagaaactacaatagcaccaacaccaacaccaataccaacatcagcaacaacagttaca 1747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176836 gaagaaactacaatagcaccaacaccaacaccaataccaacatcagcaacaacagttaca 176777
Query: 1748 gctaataatatacaacagggtatttttaaaacattaaattcagctacatcatcattcttg 1807 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176776 gctaataatatacaacagggtatttttaaaacattaaattcagctacatcatcattcttg 176717
Query: 1808 gagattaagcaatttgcattaaataaaacaaatgaaattaaatctgatattacacataaa 1867 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176716 gagattaagcaatttgcattaaataaaacaaatgaaattaaatctgatattacacataaa 176657
Query: 1868 attttaggtccatcaagtggtgatgatataaattcaagtaataatacaaatgtaacatta 1927 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176656 attttaggtccatcaagtggtgatgatataaattcaagtaataatacaaatgtaacatta 176597
Query: 1928 aataat 1933 |||||| Sbjct: 176596 aataat 176591
Score = 301 bits (152), Expect(19) = 0.0 Identities = 152/152 (100%) Strand = Plus / Minus
Query: 933 aagagaatttaacaactttatcaaatagtgataatataattggtagtgaaattgatagta 992 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177591 aagagaatttaacaactttatcaaatagtgataatataattggtagtgaaattgatagta 177532
Query: 993 caaatactgataattctacattatcaagtagtacaaattcattaactattgaaggtagtg 1052 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177531 caaatactgataattctacattatcaagtagtacaaattcattaactattgaaggtagtg 177472
Query: 1053 caagtttgccattagttagtgaatcatcaaac 1084 |||||||||||||||||||||||||||||||| Sbjct: 177471 caagtttgccattagttagtgaatcatcaaac 177440
Score = 252 bits (127), Expect(19) = 0.0 Identities = 127/127 (100%) Strand = Plus / Minus
Query: 2032 tgaagttttagagaaattaaccaaacaaacctatgaatctttacaacaatataaagagaa 2091 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176492 tgaagttttagagaaattaaccaaacaaacctatgaatctttacaacaatataaagagaa 176433
Query: 2092 taagacaaaaacaacatcatttgaaccaatgttacaaatttgggtacaattatttaattc 2151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176432 taagacaaaaacaacatcatttgaaccaatgttacaaatttgggtacaattatttaattc 176373
Query: 2152 tatcgaa 2158 ||||||| Sbjct: 176372 tatcgaa 176366
Score = 220 bits (111), Expect(19) = 0.0 Identities = 111/111 (100%) Strand = Plus / Minus
Query: 825 ctgaggaaataataagtgaaccacaatcacaaccacaaccaatagcaatagcctcattaa 884 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177811 ctgaggaaataataagtgaaccacaatcacaaccacaaccaatagcaatagcctcattaa 177752
Query: 885 ttgaggaaaagaaagatgaacaattacaaccaaagaaatctgaatcacaag 935 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177751 ttgaggaaaagaaagatgaacaattacaaccaaagaaatctgaatcacaag 177701
Score = 210 bits (106), Expect(19) = 0.0 Identities = 106/106 (100%) Strand = Plus / Minus
Query: 1529 gcagcggcattatcaactacaactacaaccacaccacaaatctcatcgccaccaatttca 1588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176995 gcagcggcattatcaactacaactacaaccacaccacaaatctcatcgccaccaatttca 176936
Query: 1589 aatcctacaccatcaccacctttatatgtagaaaccgtatcatcat 1634 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176935 aatcctacaccatcaccacctttatatgtagaaaccgtatcatcat 176890
Score = 81.8 bits (41), Expect(19) = 0.0 Identities = 41/41 (100%) Strand = Plus / Minus
Query: 1470 taggagcaccaacagaagtcaaaagaacagttattgtaaag 1510 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 177054 taggagcaccaacagaagtcaaaagaacagttattgtaaag 177014
Score = 54.0 bits (27), Expect(19) = 0.0 Identities = 27/27 (100%) Strand = Plus / Minus
Query: 1654 cacaccagcagaagtatcattatcacc 1680 ||||||||||||||||||||||||||| Sbjct: 176870 cacaccagcagaagtatcattatcacc 176844
Score = 42.1 bits (21), Expect(19) = 0.0 Identities = 21/21 (100%) Strand = Plus / Minus
Query: 3061 aattatttatattggatttaa 3081 ||||||||||||||||||||| Sbjct: 63681 aattatttatattggatttaa 63661
Score = 32.2 bits (16), Expect(19) = 0.0 Identities = 16/16 (100%) Strand = Plus / Minus
Query: 634 agatacaaatcaaatt 649 |||||||||||||||| Sbjct: 333851 agatacaaatcaaatt 333836
Score = 30.2 bits (15), Expect(19) = 0.0 Identities = 15/15 (100%) Strand = Plus / Minus
Query: 3134 agaaatgtttgaaaa 3148 ||||||||||||||| Sbjct: 39978 agaaatgtttgaaaa 39964
Score = 30.2 bits (15), Expect(19) = 0.0 Identities = 15/15 (100%) Strand = Plus / Minus
Query: 2619 caacaacatcaacaa 2633 ||||||||||||||| Sbjct: 105072 caacaacatcaacaa 105058
Score = 30.2 bits (15), Expect(19) = 0.0 Identities = 15/15 (100%) Strand = Plus / Minus
Query: 160 ttcaatattagcaag 174 ||||||||||||||| Sbjct: 514833 ttcaatattagcaag 514819
Score = 28.2 bits (14), Expect(19) = 0.0 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 3458 aactgaattatcaa 3471 |||||||||||||| Sbjct: 21892 aactgaattatcaa 21879
Score = 28.2 bits (14), Expect(19) = 0.0 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 2644 accaaaattaaaat 2657 |||||||||||||| Sbjct: 74261 accaaaattaaaat 74248
Score = 28.2 bits (14), Expect(19) = 0.0 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 2561 aatttaatgaataa 2574 |||||||||||||| Sbjct: 137914 aatttaatgaataa 137901
Score = 28.2 bits (14), Expect(19) = 0.0 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 603 ttaatgaagttgaa 616 |||||||||||||| Sbjct: 397933 ttaatgaagttgaa 397920
Score = 28.2 bits (14), Expect(19) = 0.0 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 246 tcattcaaattggt 259 |||||||||||||| Sbjct: 438144 tcattcaaattggt 438131
Score = 34.2 bits (17), Expect(19) = 5e-07 Identities = 20/21 (95%) Strand = Plus / Plus
Query: 1537 attatcaactacaactacaac 1557 ||||||||| ||||||||||| Sbjct: 235611 attatcaacaacaactacaac 235631
Score = 34.2 bits (17), Expect(19) = 5e-07 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 2378 acaaattctttaattga 2394 ||||||||||||||||| Sbjct: 281631 acaaattctttaattga 281647
Score = 34.2 bits (17), Expect(19) = 5e-07 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 2429 agtggtggtggtagtag 2445 ||||||||||||||||| Sbjct: 383494 agtggtggtggtagtag 383510
Score = 34.2 bits (17), Expect(19) = 5e-07 Identities = 20/21 (95%) Strand = Plus / Plus
Query: 2664 taattgaatggaaatcaaaag 2684 ||||||| ||||||||||||| Sbjct: 410626 taattgattggaaatcaaaag 410646
Score = 34.2 bits (17), Expect(19) = 5e-07 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 2712 taattaataatgaatat 2728 ||||||||||||||||| Sbjct: 411253 taattaataatgaatat 411269
Score = 32.2 bits (16), Expect(19) = 5e-07 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 604 taatgaagttgaagtt 619 |||||||||||||||| Sbjct: 52222 taatgaagttgaagtt 52237
Score = 32.2 bits (16), Expect(19) = 5e-07 Identities = 19/20 (95%) Strand = Plus / Plus
Query: 2409 ttattaataaaagtaatgat 2428 |||||||||||| ||||||| Sbjct: 372271 ttattaataaaattaatgat 372290
Score = 30.2 bits (15), Expect(19) = 5e-07 Identities = 18/19 (94%) Strand = Plus / Plus
Query: 84 atcatcaacaacaacaaaa 102 |||| |||||||||||||| Sbjct: 6586 atcaacaacaacaacaaaa 6604
Score = 30.2 bits (15), Expect(19) = 5e-07 Identities = 15/15 (100%) Strand = Plus / Plus
Query: 938 aatttaacaacttta 952 ||||||||||||||| Sbjct: 65660 aatttaacaacttta 65674
Score = 30.2 bits (15), Expect(19) = 5e-07 Identities = 18/19 (94%) Strand = Plus / Plus
Query: 1168 tagtacaacaacgacaaca 1186 |||||||||||| |||||| Sbjct: 180940 tagtacaacaacaacaaca 180958
Score = 30.2 bits (15), Expect(19) = 5e-07 Identities = 18/19 (94%) Strand = Plus / Plus
Query: 2287 aaatcaattattagaattg 2305 ||||||||||||| ||||| Sbjct: 263391 aaatcaattattataattg 263409
Score = 30.2 bits (15), Expect(19) = 5e-07 Identities = 15/15 (100%) Strand = Plus / Plus
Query: 2397 acgatgatattatta 2411 ||||||||||||||| Sbjct: 291488 acgatgatattatta 291502
Score = 28.2 bits (14), Expect(19) = 5e-07 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 126 caaattcaatacca 139 |||||||||||||| Sbjct: 46690 caaattcaatacca 46703
Score = 28.2 bits (14), Expect(19) = 5e-07 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 960 gtgataatataatt 973 |||||||||||||| Sbjct: 168733 gtgataatataatt 168746
Score = 28.2 bits (14), Expect(19) = 5e-07 Identities = 20/22 (90%) Strand = Plus / Plus
Query: 1321 tataaagaaaaaggttataaaa 1342 |||||||||||| |||||||| Sbjct: 199693 tataaagaaaaacattataaaa 199714
Score = 28.2 bits (14), Expect(19) = 5e-07 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 1903 aagtaataatacaa 1916 |||||||||||||| Sbjct: 243526 aagtaataatacaa 243539
Score = 28.2 bits (14), Expect(19) = 5e-07 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 2057 caaacctatgaatc 2070 |||||||||||||| Sbjct: 259975 caaacctatgaatc 259988
Score = 28.2 bits (14), Expect(19) = 5e-07 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 2914 taaaaaaggttttt 2927 |||||||||||||| Sbjct: 415253 taaaaaaggttttt 415266
Score = 28.2 bits (14), Expect(19) = 5e-07 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 3028 ctggtgaatcaagt 3041 |||||||||||||| Sbjct: 440569 ctggtgaatcaagt 440582
Score = 46.1 bits (23), Expect(11) = 5e-04 Identities = 32/35 (91%) Strand = Plus / Plus
Query: 1706 ccaacaccaacaccaataccaacatcagcaacaac 1740 |||||||||||||||| ||||||| || ||||||| Sbjct: 306693 ccaacaccaacaccaacaccaacaacaacaacaac 306727
Score = 38.2 bits (19), Expect(11) = 5e-04 Identities = 22/23 (95%) Strand = Plus / Plus
Query: 843 aaccacaatcacaaccacaacca 865 ||||||||| ||||||||||||| Sbjct: 306451 aaccacaattacaaccacaacca 306473
Score = 34.2 bits (17), Expect(11) = 5e-04 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 1825 attaaataaaacaaatg 1841 ||||||||||||||||| Sbjct: 312999 attaaataaaacaaatg 313015
Score = 32.2 bits (16), Expect(11) = 5e-04 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 89 caacaacaacaaaata 104 |||||||||||||||| Sbjct: 235646 caacaacaacaaaata 235661
Score = 30.2 bits (15), Expect(11) = 5e-04 Identities = 15/15 (100%) Strand = Plus / Plus
Query: 76 aaataatcatcatca 90 ||||||||||||||| Sbjct: 181294 aaataatcatcatca 181308
Score = 30.2 bits (15), Expect(11) = 5e-04 Identities = 18/19 (94%) Strand = Plus / Plus
Query: 431 acaaatccaataccaaata 449 ||||| ||||||||||||| Sbjct: 296539 acaaaaccaataccaaata 296557
Score = 30.2 bits (15), Expect(11) = 5e-04 Identities = 21/23 (91%) Strand = Plus / Plus
Query: 2362 aaatattttaaattttacaaatt 2384 |||| |||||||||||| ||||| Sbjct: 412007 aaattttttaaattttaaaaatt 412029
Score = 30.2 bits (15), Expect(11) = 5e-04 Identities = 15/15 (100%) Strand = Plus / Plus
Query: 2430 gtggtggtggtagta 2444 ||||||||||||||| Sbjct: 441013 gtggtggtggtagta 441027
Score = 30.2 bits (15), Expect(11) = 5e-04 Identities = 15/15 (100%) Strand = Plus / Plus
Query: 2646 caaaattaaaatcaa 2660 ||||||||||||||| Sbjct: 493102 caaaattaaaatcaa 493116
Score = 30.2 bits (15), Expect(11) = 5e-04 Identities = 15/15 (100%) Strand = Plus / Plus
Query: 2681 aaagatactttaata 2695 ||||||||||||||| Sbjct: 493299 aaagatactttaata 493313
Score = 28.2 bits (14), Expect(11) = 5e-04 Identities = 17/18 (94%) Strand = Plus / Plus
Query: 2269 attattatttagattctt 2286 ||||||||||| |||||| Sbjct: 400661 attattatttaaattctt 400678
Score = 36.2 bits (18), Expect(18) = 8e-04 Identities = 21/22 (95%) Strand = Plus / Minus
Query: 2420 agtaatgatagtggtggtggta 2441 ||||||||||||||| |||||| Sbjct: 386760 agtaatgatagtggtagtggta 386739
Score = 34.2 bits (17), Expect(18) = 8e-04 Identities = 20/21 (95%) Strand = Plus / Minus
Query: 1709 acaccaacaccaataccaaca 1729 |||||||||||||| |||||| Sbjct: 534894 acaccaacaccaattccaaca 534874
Score = 32.2 bits (16), Expect(18) = 8e-04 Identities = 16/16 (100%) Strand = Plus / Minus
Query: 2725 atatggtaatggtaat 2740 |||||||||||||||| Sbjct: 323866 atatggtaatggtaat 323851
Score = 32.2 bits (16), Expect(18) = 8e-04 Identities = 16/16 (100%) Strand = Plus / Minus
Query: 1770 tttttaaaacattaaa 1785 |||||||||||||||| Sbjct: 486406 tttttaaaacattaaa 486391
Score = 30.2 bits (15), Expect(18) = 8e-04 Identities = 15/15 (100%) Strand = Plus / Minus
Query: 2918 aaaggtttttcaaat 2932 ||||||||||||||| Sbjct: 169729 aaaggtttttcaaat 169715
Score = 30.2 bits (15), Expect(18) = 8e-04 Identities = 18/19 (94%) Strand = Plus / Minus
Query: 2704 tgataatgtaattaataat 2722 ||||||| ||||||||||| Sbjct: 350888 tgataatataattaataat 350870
Score = 30.2 bits (15), Expect(18) = 8e-04 Identities = 15/15 (100%) Strand = Plus / Minus
Query: 2658 caaatttaattgaat 2672 ||||||||||||||| Sbjct: 353046 caaatttaattgaat 353032
Score = 30.2 bits (15), Expect(18) = 8e-04 Identities = 15/15 (100%) Strand = Plus / Minus
Query: 2643 taccaaaattaaaat 2657 ||||||||||||||| Sbjct: 385880 taccaaaattaaaat 385866
Score = 30.2 bits (15), Expect(18) = 8e-04 Identities = 15/15 (100%) Strand = Plus / Minus
Query: 2144 tttaattctatcgaa 2158 ||||||||||||||| Sbjct: 448125 tttaattctatcgaa 448111
Score = 30.2 bits (15), Expect(18) = 8e-04 Identities = 15/15 (100%) Strand = Plus / Minus
Query: 2099 aaaacaacatcattt 2113 ||||||||||||||| Sbjct: 480194 aaaacaacatcattt 480180
Score = 30.2 bits (15), Expect(18) = 8e-04 Identities = 15/15 (100%) Strand = Plus / Minus
Query: 1750 taataatatacaaca 1764 ||||||||||||||| Sbjct: 486455 taataatatacaaca 486441
Score = 28.2 bits (14), Expect(18) = 8e-04 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 3620 tttttcaaagagat 3633 |||||||||||||| Sbjct: 88703 tttttcaaagagat 88690
Score = 28.2 bits (14), Expect(18) = 8e-04 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 3524 atttttaggttcaa 3537 |||||||||||||| Sbjct: 129775 atttttaggttcaa 129762
Score = 28.2 bits (14), Expect(18) = 8e-04 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 3137 aatgtttgaaaaga 3150 |||||||||||||| Sbjct: 135899 aatgtttgaaaaga 135886
Score = 28.2 bits (14), Expect(18) = 8e-04 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 2890 ggaattaaccattt 2903 |||||||||||||| Sbjct: 181177 ggaattaaccattt 181164
Score = 28.2 bits (14), Expect(18) = 8e-04 Identities = 20/22 (90%) Strand = Plus / Minus
Query: 2743 attgaaatcattggaatcaatg 2764 ||||||||||||| ||| |||| Sbjct: 302065 attgaaatcattgaaattaatg 302044
Score = 28.2 bits (14), Expect(18) = 8e-04 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 2404 tattattattaata 2417 |||||||||||||| Sbjct: 435595 tattattattaata 435582
Score = 28.2 bits (14), Expect(18) = 8e-04 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 2291 caattattagaatt 2304 |||||||||||||| Sbjct: 438472 caattattagaatt 438459
Score = 36.2 bits (18), Expect(14) = 0.010 Identities = 21/22 (95%) Strand = Plus / Minus
Query: 1540 atcaactacaactacaaccaca 1561 |||||| ||||||||||||||| Sbjct: 179086 atcaacaacaactacaaccaca 179065
Score = 36.2 bits (18), Expect(14) = 0.010 Identities = 24/26 (92%) Strand = Plus / Minus
Query: 33 aattaaccacaaactcaaattcaaat 58 |||||| |||||| |||||||||||| Sbjct: 375639 aattaaacacaaattcaaattcaaat 375614
Score = 34.2 bits (17), Expect(14) = 0.010 Identities = 17/17 (100%) Strand = Plus / Minus
Query: 2401 tgatattattattaata 2417 ||||||||||||||||| Sbjct: 133743 tgatattattattaata 133727
Score = 32.2 bits (16), Expect(14) = 0.010 Identities = 19/20 (95%) Strand = Plus / Minus
Query: 1172 acaacaacgacaacagcagt 1191 |||||||| ||||||||||| Sbjct: 202972 acaacaacaacaacagcagt 202953
Score = 32.2 bits (16), Expect(14) = 0.010 Identities = 16/16 (100%) Strand = Plus / Minus
Query: 216 cagctaccaatgttgg 231 |||||||||||||||| Sbjct: 300443 cagctaccaatgttgg 300428
Score = 32.2 bits (16), Expect(14) = 0.010 Identities = 16/16 (100%) Strand = Plus / Minus
Query: 89 caacaacaacaaaata 104 |||||||||||||||| Sbjct: 333718 caacaacaacaaaata 333703
Score = 30.2 bits (15), Expect(14) = 0.010 Identities = 15/15 (100%) Strand = Plus / Minus
Query: 2588 aatcaattatttgaa 2602 ||||||||||||||| Sbjct: 56834 aatcaattatttgaa 56820
Score = 30.2 bits (15), Expect(14) = 0.010 Identities = 15/15 (100%) Strand = Plus / Minus
Query: 2287 aaatcaattattaga 2301 ||||||||||||||| Sbjct: 167109 aaatcaattattaga 167095
Score = 30.2 bits (15), Expect(14) = 0.010 Identities = 30/35 (85%) Strand = Plus / Minus
Query: 1707 caacaccaacaccaataccaacatcagcaacaaca 1741 ||||| ||||| ||| | ||||| ||||||||||| Sbjct: 176586 caacagcaacagcaacagcaacaacagcaacaaca 176552
Score = 28.2 bits (14), Expect(14) = 0.010 Identities = 20/22 (90%) Strand = Plus / Minus
Query: 2923 tttttcaaattgttttgaaaaa 2944 ||||||||||| |||| ||||| Sbjct: 38766 tttttcaaattttttttaaaaa 38745
Score = 28.2 bits (14), Expect(14) = 0.010 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 2533 agaattattagaac 2546 |||||||||||||| Sbjct: 73691 agaattattagaac 73678
Score = 28.2 bits (14), Expect(14) = 0.010 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 2430 gtggtggtggtagt 2443 |||||||||||||| Sbjct: 112707 gtggtggtggtagt 112694
Score = 28.2 bits (14), Expect(14) = 0.010 Identities = 17/18 (94%) Strand = Plus / Minus
Query: 2320 ttcaaaattctttgcaaa 2337 ||||||||||||| |||| Sbjct: 162763 ttcaaaattcttttcaaa 162746
Score = 28.2 bits (14), Expect(14) = 0.010 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 1123 attaaaatcatcaa 1136 |||||||||||||| Sbjct: 277797 attaaaatcatcaa 277784
Score = 38.2 bits (19), Expect(16) = 0.023 Identities = 19/19 (100%) Strand = Plus / Minus
Query: 1539 tatcaactacaactacaac 1557 ||||||||||||||||||| Sbjct: 317673 tatcaactacaactacaac 317655
Score = 36.2 bits (18), Expect(16) = 0.023 Identities = 18/18 (100%) Strand = Plus / Minus
Query: 2648 aaattaaaatcaaattta 2665 |||||||||||||||||| Sbjct: 230318 aaattaaaatcaaattta 230301
Score = 34.2 bits (17), Expect(16) = 0.023 Identities = 17/17 (100%) Strand = Plus / Minus
Query: 2711 gtaattaataatgaata 2727 ||||||||||||||||| Sbjct: 137463 gtaattaataatgaata 137447
Score = 32.2 bits (16), Expect(16) = 0.023 Identities = 16/16 (100%) Strand = Plus / Minus
Query: 2405 attattattaataaaa 2420 |||||||||||||||| Sbjct: 267515 attattattaataaaa 267500
Score = 32.2 bits (16), Expect(16) = 0.023 Identities = 22/24 (91%) Strand = Plus / Minus
Query: 2379 caaattctttaattgaaaacgatg 2402 ||||||||||||||| || ||||| Sbjct: 269326 caaattctttaattgcaatcgatg 269303
Score = 30.2 bits (15), Expect(16) = 0.023 Identities = 15/15 (100%) Strand = Plus / Minus
Query: 2364 atattttaaatttta 2378 ||||||||||||||| Sbjct: 285227 atattttaaatttta 285213
Score = 28.2 bits (14), Expect(16) = 0.023 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 2925 tttcaaattgtttt 2938 |||||||||||||| Sbjct: 34351 tttcaaattgtttt 34338
Score = 28.2 bits (14), Expect(16) = 0.023 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 2727 atggtaatggtaat 2740 |||||||||||||| Sbjct: 37384 atggtaatggtaat 37371
Score = 28.2 bits (14), Expect(16) = 0.023 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 2629 aacaagaaaattta 2642 |||||||||||||| Sbjct: 234375 aacaagaaaattta 234362
Score = 28.2 bits (14), Expect(16) = 0.023 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 1836 caaatgaaattaaa 1849 |||||||||||||| Sbjct: 315208 caaatgaaattaaa 315195
Score = 28.2 bits (14), Expect(16) = 0.023 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 1359 atcaacaattaaat 1372 |||||||||||||| Sbjct: 317837 atcaacaattaaat 317824
Score = 28.2 bits (14), Expect(16) = 0.023 Identities = 17/18 (94%) Strand = Plus / Minus
Query: 1337 ataaaaacagcattacca 1354 ||||| |||||||||||| Sbjct: 343791 ataaacacagcattacca 343774
Score = 28.2 bits (14), Expect(16) = 0.023 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 1197 catcaattcaaaga 1210 |||||||||||||| Sbjct: 345276 catcaattcaaaga 345263
Score = 28.2 bits (14), Expect(16) = 0.023 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 447 atataatattgaaa 460 |||||||||||||| Sbjct: 387664 atataatattgaaa 387651
Score = 28.2 bits (14), Expect(16) = 0.023 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 89 caacaacaacaaaa 102 |||||||||||||| Sbjct: 392093 caacaacaacaaaa 392080
Score = 28.2 bits (14), Expect(16) = 0.023 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 80 aatcatcatcaaca 93 |||||||||||||| Sbjct: 394484 aatcatcatcaaca 394471
Score = 42.1 bits (21), Expect(16) = 0.061 Identities = 27/29 (93%) Strand = Plus / Plus
Query: 1704 caccaacaccaacaccaataccaacatca 1732 ||||||||| |||||||||||| |||||| Sbjct: 149087 caccaacacaaacaccaatacctacatca 149115
Score = 34.2 bits (17), Expect(16) = 0.061 Identities = 23/25 (92%) Strand = Plus / Plus
Query: 1242 ttcctttatcatcagaaccattaat 1266 |||||||||||||| ||| |||||| Sbjct: 144257 ttcctttatcatcacaactattaat 144281
Score = 32.2 bits (16), Expect(16) = 0.061 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 2581 aaatcaaaatcaatta 2596 |||||||||||||||| Sbjct: 262109 aaatcaaaatcaatta 262124
Score = 32.2 bits (16), Expect(16) = 0.061 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 2657 tcaaatttaattgaat 2672 |||||||||||||||| Sbjct: 291394 tcaaatttaattgaat 291409
Score = 30.2 bits (15), Expect(16) = 0.061 Identities = 15/15 (100%) Strand = Plus / Plus
Query: 2287 aaatcaattattaga 2301 ||||||||||||||| Sbjct: 149844 aaatcaattattaga 149858
Score = 30.2 bits (15), Expect(16) = 0.061 Identities = 15/15 (100%) Strand = Plus / Plus
Query: 2647 aaaattaaaatcaaa 2661 ||||||||||||||| Sbjct: 270036 aaaattaaaatcaaa 270050
Score = 28.2 bits (14), Expect(16) = 0.061 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 77 aataatcatcatca 90 |||||||||||||| Sbjct: 37514 aataatcatcatca 37527
Score = 28.2 bits (14), Expect(16) = 0.061 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 89 caacaacaacaaaa 102 |||||||||||||| Sbjct: 109427 caacaacaacaaaa 109440
Score = 28.2 bits (14), Expect(16) = 0.061 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 126 caaattcaatacca 139 |||||||||||||| Sbjct: 117685 caaattcaatacca 117698
Score = 28.2 bits (14), Expect(16) = 0.061 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 546 taccatttggtaat 559 |||||||||||||| Sbjct: 131256 taccatttggtaat 131269
Score = 28.2 bits (14), Expect(16) = 0.061 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 2301 aattggatccaatt 2314 |||||||||||||| Sbjct: 175922 aattggatccaatt 175935
Score = 28.2 bits (14), Expect(16) = 0.061 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 2401 tgatattattatta 2414 |||||||||||||| Sbjct: 213534 tgatattattatta 213547
Score = 28.2 bits (14), Expect(16) = 0.061 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 2411 attaataaaagtaa 2424 |||||||||||||| Sbjct: 250626 attaataaaagtaa 250639
Score = 28.2 bits (14), Expect(16) = 0.061 Identities = 17/18 (94%) Strand = Plus / Plus
Query: 2705 gataatgtaattaataat 2722 |||||| ||||||||||| Sbjct: 293272 gataatataattaataat 293289
Score = 28.2 bits (14), Expect(16) = 0.061 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 2951 atcaattgaaattt 2964 |||||||||||||| Sbjct: 322024 atcaattgaaattt 322037
Score = 28.2 bits (14), Expect(16) = 0.061 Identities = 20/22 (90%) Strand = Plus / Plus
Query: 3046 catttgaaatttcagaattatt 3067 |||||||||||| | ||||||| Sbjct: 401464 catttgaaatttgaaaattatt 401485
Score = 50.1 bits (25), Expect = 0.61 Identities = 34/37 (91%) Strand = Plus / Minus
Query: 1705 accaacaccaacaccaataccaacatcagcaacaaca 1741 ||||||||||||||||| |||||||||| || ||||| Sbjct: 105937 accaacaccaacaccaacaccaacatcaacaccaaca 105901
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 92845959 Number of Hits to DB: 4,310,509,645 Number of extensions: 277164958 Number of successful extensions: 24192062 Number of sequences better than 10.0: 1306 Length of query: 3658 Length of database: 95,242,211,685 Length adjustment: 25 Effective length of query: 3633 Effective length of database: 97,216,030,006 Effective search space: 353185837011798 Effective search space used: 353185837011798 X1: 11 (21.8 bits) S2: 23 (46.1 bits)
|
protein update |
2009. 6.29 |
Homology vs Protein |
|
PSORT |
|
VS (DIR, S) |
0 |
VH (FL, L) |
13 |
VF (FL, S) |
3 |
AH (FL, L) |
9 |
AF (FL, S) |
1 |
SL (DIR, L) |
1 |
SS (DIR, S) |
0 |
SH (FL, L) |
4 |
SF (FL, S) |
2 |
CH (FL, L) |
18 |
CF (FL, S) |
1 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |