Contig-U11313-1
Contig ID Contig-U11313-1
Contig update 2002.12.18
Contig sequence
>Contig-U11313-1 (Contig-U11313-1Q) /CSM_Contig/Contig-U11313-1Q.Seq.d
ATTTTTTTTTTCTTTCACTTTTCGAAAACAAATATAAAATGGTAGAAGAT
GAAGAAATAAATGATCAAATATCTGAAGAAGAAGAAGAAAAAAAGAAAAA
CAATGATTCAGATGAAGAAATGAAGGATATAGATGAAGAGGAAGAGGAAG
AGGAAGAGGAAGAGGAGGAGGAAGAGGAGGAAGAAAAGGAGGAAGAAGAG
GAAGAGGAAGAGGAAGAAACACCAAAAAAGCCAATGCCTCCACCTCAATC
TAAAGCAAAACCTTCCTCACAACCACCAGATATAAAAAAAGCATCACAAC
AATCACAAACACAAAAGAATACGCCCCCACCAATACAAACATCACAATCA
TCTCAATCATCACAATCATCACAATCATCTCAACAACAACAACCAAAGAA
TATATCACAAACACAACAACCAAAGAATACACCCCCATTACAATCATCAC
AAACATCACAAACATCACAAAAGACACCAGTATCTAGTAATAATGGAATT
GAGAAAAGATTAATGATTACTAAAATGGTTATGGAGAATTTTAAATCATA
TGCAGGTGCCCAAGAGGTTGGACCATTTCATAAGTGTTTTAGTTCAGTAG
TTGGTCCTAATGGTAGTGGTAAATCAAATGTTATCGATGCAATGTTATTT
GTATTTGGTTA----------AAAGATTTCCAATGGTGCAACTCAAAATT
TAGATGATGCAATCAAAGCACTAGAGGATGCCAAAACCATTTCATCCACT
CGTAAGAATAATATCACCAAATCAAAGAAGGAGTTGGAATCGGTTAAAGC
AATTATAGTGGATCTTGAGAAAAGACTTGCAAGTGGTAAAGTCACCGAAG
AGAATCTCTATAGAAATACAATGGATGCCAAGAGACAATTGGAACAAATT
AAGACCAATCTCTCTGAAAATAGTTCAAGAAACACTATATTGGATCGTTT
ATTAAAGATTAAAGAAAGTGGTCAAATTAGTGGTATTCATGGTAGATTGG
GTGATTTGGGTGCAATCGATCAAAAGTATGATGTTGCCATCTCTACTGCT
GCCTTCTCACAAATGGATAATATCATTGTAGAGACAACAGCAGCCGCCGA
AGCATGTGTTGAACTATTACGTAAGGAGAATTTAGGTAGAGCTACATTTA
TGATCTTGGAGAATTTAGAATATCAACGTCAAAATCTTGGTCCAGTTCAA
ACACCAAATAATACACCACGTCTATTTGATTTAATAAAGATGAAAGATGA
AAAAAAGTATGCAACCGCCTTTTTCACTGCAGTTGGTCATACTTTGGTTG
CTGATACTTTGGATGAAGCAACCAAAATAGCCTATGGAGCAAAAAGACAT
CGTGTTGTAACTTTGGATGGTTCACTCATTGACACTAGTGGTGCAATGAG
TGGTGGTGGTCTCAAACCAAGAGTTGGTGCAATGAACTCCAAAATTAAAG
GGTGATCCAAAAGAAGATAAAAAGAAATTGATAGAGTTACAAGACAATCT
TTCTCAATTGGATAGTGATCTTCGTCAATGTAGGGATGAGTTGGTAGAGA
TTGAAAACCAAATTCAACAAGCACAAAATCGTCGTTCTGAATTAGAATTA
GAATTGCCAAAGATGGATATGGATATTAAAGCAGCCATTACAAAATGTGA
AGAGTTAACCAAAGTTATTCCTCAACTAAAGAATAAAGCAAAGTTATCCA
CTGAAAAGAAGGAACAAATCGATTCCATCAAAGAATCATTGATTGTTGAT
CAAAAATCTTTAGATAAGGTTCAAGAGAAAGTTAATAAATTAGAATCTGA
AGTTCAAGAAATTCAAAACAGTATCTTAAATGTTGGTGGTCCACAATTGA
AAATGCAAAAGAATAAAGTTGAATCACTTCAATCTAGAATTGATTCAAAC
CAAACCAACACTACCAAAGCAAATGTTCAAATCAAATCATTAGCAAAATC
AATGGAAAAATCAATTAAAATATTGAATGAAAATACCAAAGAAAAGGATG
AGAATGAAGCAGCATTAGCAGAGATTCTAGAGAAATATAAATCATTGGAG
AAAGAGAATCTTAAAGCCACTGAAGCAAGGAAGCTGTCTCGAACAACTTC
GNAAAGGAAGNAAGAAACCAAAGAA

Gap gap included
Contig length 2115
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 4418992
End point 4416874
Strand (PLUS/MINUS) MINUS
Number of clones 7
Number of EST 11
Link to clone list U11313
List of clone(s)

est1=SHI723F,1,613
est2=AHF340F,11,575
est3=AHE752F,12,564
est4=AHF604F,12,661
est5=SHH590F,24,658
est6=AHF881F,25,563
est7=AHK678F,25,582
est8=AHK678Z,662,1442
est9=AHE752Z,1112,1770
est10=AHF604Z,1323,2116
est11=AHF340Z,1330,2067
Translated Amino Acid sequence
FFFLSLFENKYKMVEDEEINDQISEEEEEKKKNNDSDEEMKDIDEEEEEEEEEEEEEEEE
EKEEEEEEEEEETPKKPMPPPQSKAKPSSQPPDIKKASQQSQTQKNTPPPIQTSQSSQSS
QSSQSSQQQQPKNISQTQQPKNTPPLQSSQTSQTSQKTPVSSNNGIEKRLMITKMVMENF
KSYAGAQEVGPFHKCFSSVVGPNGSGKSNVIDAMLFVFG---

---KISNGATQNLDDAIKALEDAKTISSTRKNNITKSKKELESVKAIIVDLEKRLASGKV
TEENLYRNTMDAKRQLEQIKTNLSENSSRNTILDRLLKIKESGQISGIHGRLGDLGAIDQ
KYDVAISTAAFSQMDNIIVETTAAAEACVELLRKENLGRATFMILENLEYQRQNLGPVQT
PNNTPRLFDLIKMKDEKKYATAFFTAVGHTLVADTLDEATKIAYGAKRHRVVTLDGSLID
TSGAMSGGGLKPRVGAMNSKIKG*skrr*keidrvtrqsfsig**sssm*g*vgrd*kpn
ststkssf*iririakdgygy*sshykm*rvnqsysstke*skvih*kegtnrfhqriid
c*skifr*gsres**iri*ssrnskqylkcwwstienake*s*itsi*n*fkpnqhyqsk
csnqiiskingkin*nie*kyqrkg*e*ssisrdsrei*iigeres*sh*skeavsnnfx
kexrnqr


Translated Amino Acid sequence (All Frames)
Frame A:
iffffhfsktnikw*kmkk*mikylkkkkkkrktmiqmkk*ri*mkrkrkrkrkrrrkrr
kkrrkkrkrkrkkhqksqclhlnlkqnlphnhqi*kkhhnnhkhkrirphqykhhnhlnh
hnhhnhlnnnnqriyhkhnnqrihphynhhkhhkhhkrhqylvimelrkd**llkwlwri
lnhmqvpkrldhfisvlvq*lvlmvvvnqmlsmqcylylv---

---kdfqwcnskfr*cnqstrgcqnhfihs*e*yhqikegvgig*snysgs*ektckw*s
hrresl*kyngcqetigtn*dqsl*k*fkkhyigsfikd*rkwsn*wysw*ig*fgcnrs
kv*cchlycclltng*yhcrdnssrrsmc*tit*gefr*syiydlgefristskswsssn
tk*yttsi*fnkder*kkvcnrlfhcswsyfgc*yfg*snqnslwskktsccnfgwfth*
h*wcnewwwsqtkswcnelqn*rviqkkikrn**syktiflnwivifvnvgmsw*rlktk
fnkhkivvln*n*ncqrwiwilkqplqnvks*pklfln*rikqsyplkrrnksipsknh*
lliknl*irfkrklin*nlkfkkfktvs*mlvvhn*kckriklnhfnleliqtkptlpkq
mfksnh*qnqwknqlky*mkipkkrmrmkqh*qrf*rninhwrkrilkplkqgscleqlr
kgxkkpk

Frame B:
fffsftfrkqi*ngrr*rnk*sni*rrrrkkekq*fr*rnegyr*rgrgrgrgrgggrgg
rkggrrgrgrgrntkkanastsi*sktfltttrykksittitntkeyaptntnitiisii
tiitiisttttkeyitntttkeytpitiitnitnitkdtsi***wn*ekindy*ngygef
*iicrcprgwtis*vf*fssws*w*w*ikcyrcnviciwl---

---KISNGATQNLDDAIKALEDAKTISSTRKNNITKSKKELESVKAIIVDLEKRLASGKV
TEENLYRNTMDAKRQLEQIKTNLSENSSRNTILDRLLKIKESGQISGIHGRLGDLGAIDQ
KYDVAISTAAFSQMDNIIVETTAAAEACVELLRKENLGRATFMILENLEYQRQNLGPVQT
PNNTPRLFDLIKMKDEKKYATAFFTAVGHTLVADTLDEATKIAYGAKRHRVVTLDGSLID
TSGAMSGGGLKPRVGAMNSKIKG*skrr*keidrvtrqsfsig**sssm*g*vgrd*kpn
ststkssf*iririakdgygy*sshykm*rvnqsysstke*skvih*kegtnrfhqriid
c*skifr*gsres**iri*ssrnskqylkcwwstienake*s*itsi*n*fkpnqhyqsk
csnqiiskingkin*nie*kyqrkg*e*ssisrdsrei*iigeres*sh*skeavsnnfx
kexrnqr

Frame C:
FFFLSLFENKYKMVEDEEINDQISEEEEEKKKNNDSDEEMKDIDEEEEEEEEEEEEEEEE
EKEEEEEEEEEETPKKPMPPPQSKAKPSSQPPDIKKASQQSQTQKNTPPPIQTSQSSQSS
QSSQSSQQQQPKNISQTQQPKNTPPLQSSQTSQTSQKTPVSSNNGIEKRLMITKMVMENF
KSYAGAQEVGPFHKCFSSVVGPNGSGKSNVIDAMLFVFG---

---rfpmvqlki*mmqskh*rmpkpfhplvriispnqrrswnrlkql*wilrkdlqvvks
pkrisieiqwmprdnwnklrpislkivqetlywivy*rlkkvvklvvfmvdwviwvqsik
smmlpslllpshkwiisl*rqqqppkhvlnyyvrri*velhl*swri*ninvkilvqfkh
qiihhvyli**r*kmkksmqppfslqlvilwllilwmkqpk*pmeqkdivl*lwmvhslt
lvvq*vvvvsnqelvq*tpklkgdpkedkkklielqdnlsqldsdlrqcrdelveienqi
qqaqnrrselelelpkmdmdikaaitkceeltkvipqlknkaklstekkeqidsikesli
vdqksldkvqekvnklesevqeiqnsilnvggpqlkmqknkveslqsridsnqtnttkan
vqikslaksmeksikilnentkekdeneaalaeilekykslekenlkatearklsrttsx
rkxetke

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11313-1 (Contig-U11313-1Q)
/CSM_Contig/Contig-U11313-1Q.Seq.d
(2125 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11313-1 (Contig-U11313-1Q) /CSM_Contig/Conti... 2892 0.0
Contig-U12114-1 (Contig-U12114-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U07842-1 (Contig-U07842-1Q) /CSM_Contig/Conti... 38 0.038
Contig-U14097-1 (Contig-U14097-1Q) /CSM_Contig/Conti... 36 0.15
Contig-U13520-1 (Contig-U13520-1Q) /CSM_Contig/Conti... 36 0.15
Contig-U13044-1 (Contig-U13044-1Q) /CSM_Contig/Conti... 36 0.15
Contig-U12647-1 (Contig-U12647-1Q) /CSM_Contig/Conti... 36 0.15
Contig-U12024-1 (Contig-U12024-1Q) /CSM_Contig/Conti... 36 0.15
Contig-U11515-1 (Contig-U11515-1Q) /CSM_Contig/Conti... 36 0.15
Contig-U11010-1 (Contig-U11010-1Q) /CSM_Contig/Conti... 36 0.15

>Contig-U11313-1 (Contig-U11313-1Q) /CSM_Contig/Contig-U11313-1Q.Seq.d
Length = 2125

Score = 2892 bits (1459), Expect = 0.0
Identities = 1503/1510 (99%)
Strand = Plus / Plus


Query: 418 aaccaaagaatacacccccattacaatcatcacaaacatcacaaacatcacaaaagacac 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aaccaaagaatacacccccattacaatcatcacaaacatcacaaacatcacaaaagacac 477


Query: 478 cagtatctagtaataatggaattgagaaaagattaatgattactaaaatggttatggaga 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cagtatctagtaataatggaattgagaaaagattaatgattactaaaatggttatggaga 537


Query: 538 attttaaatcatatgcaggtgcccaagaggttggaccatttcataagtgttttagttcag 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 attttaaatcatatgcaggtgcccaagaggttggaccatttcataagtgttttagttcag 597


Query: 598 tagttggtcctaatggtagtggtaaatcaaatgttatcgatgcaatgttatttgtatttg 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tagttggtcctaatggtagtggtaaatcaaatgttatcgatgcaatgttatttgtatttg 657


Query: 658 gttannnnnnnnnnaaagatttccaatggtgcaactcaaaatttagatgatgcaatcaaa 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gttannnnnnnnnnaaagatttccaatggtgcaactcaaaatttagatgatgcaatcaaa 717


Query: 718 gcactagaggatgccaaaaccatttcatccactcgtaagaataatatcaccaaatcaaag 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gcactagaggatgccaaaaccatttcatccactcgtaagaataatatcaccaaatcaaag 777


Query: 778 aaggagttggaatcggttaaagcaattatagtggatcttgagaaaagacttgcaagtggt 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 aaggagttggaatcggttaaagcaattatagtggatcttgagaaaagacttgcaagtggt 837


Query: 838 aaagtcaccgaagagaatctctatagaaatacaatggatgccaagagacaattggaacaa 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 aaagtcaccgaagagaatctctatagaaatacaatggatgccaagagacaattggaacaa 897


Query: 898 attaagaccaatctctctgaaaatagttcaagaaacactatattggatcgtttattaaag 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 attaagaccaatctctctgaaaatagttcaagaaacactatattggatcgtttattaaag 957


Query: 958 attaaagaaagtggtcaaattagtggtattcatggtagattgggtgatttgggtgcaatc 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 attaaagaaagtggtcaaattagtggtattcatggtagattgggtgatttgggtgcaatc 1017


Query: 1018 gatcaaaagtatgatgttgccatctctactgctgccttctcacaaatggataatatcatt 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 gatcaaaagtatgatgttgccatctctactgctgccttctcacaaatggataatatcatt 1077


Query: 1078 gtagagacaacagcagccgccgaagcatgtgttgaactattacgtaaggagaatttaggt 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1078 gtagagacaacagcagccgccgaagcatgtgttgaactattacgtaaggagaatttaggt 1137


Query: 1138 agagctacatttatgatcttggagaatttagaatatcaacgtcaaaatcttggtccagtt 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1138 agagctacatttatgatcttggagaatttagaatatcaacgtcaaaatcttggtccagtt 1197


Query: 1198 caaacaccaaataatacaccacgtctatttgatttaataaagatgaaagatgnnnnnnng 1257
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1198 caaacaccaaataatacaccacgtctatttgatttaataaagatgaaagatgaaaaaaag 1257


Query: 1258 tatgcaaccgcctttttcactgcagttggtcatactttggttgctgatactttggatgaa 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1258 tatgcaaccgcctttttcactgcagttggtcatactttggttgctgatactttggatgaa 1317


Query: 1318 gcaaccaaaatagcctatggagcaaaaagacatcgtgttgtaactttggatggttcactc 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1318 gcaaccaaaatagcctatggagcaaaaagacatcgtgttgtaactttggatggttcactc 1377


Query: 1378 attgacactagtggtgcaatgagtggtggtggtctcaaaccaagagttggtgcaatgaac 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1378 attgacactagtggtgcaatgagtggtggtggtctcaaaccaagagttggtgcaatgaac 1437


Query: 1438 tccaaaattaaagggtgatccaaaagaagataaaaagaaattgatagagttacaagacaa 1497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1438 tccaaaattaaagggtgatccaaaagaagataaaaagaaattgatagagttacaagacaa 1497


Query: 1498 tctttctcaattggatagtgatcttcgtcaatgtagggatgagttggtagagattgaaaa 1557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1498 tctttctcaattggatagtgatcttcgtcaatgtagggatgagttggtagagattgaaaa 1557


Query: 1558 ccaaattcaacaagcacaaaatcgtcgttctgaattagaattagaattgccaaagatgga 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1558 ccaaattcaacaagcacaaaatcgtcgttctgaattagaattagaattgccaaagatgga 1617


Query: 1618 tatggatattaaagcagccattacaaaatgtgaagagttaaccaaagttattcctcaact 1677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1618 tatggatattaaagcagccattacaaaatgtgaagagttaaccaaagttattcctcaact 1677


Query: 1678 aaagaataaagcaaagttatccactgaaaagaaggaacaaatcgattccatcaaagaatc 1737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1678 aaagaataaagcaaagttatccactgaaaagaaggaacaaatcgattccatcaaagaatc 1737


Query: 1738 attgattgttgatcaaaaatctttagataaggttcaagagaaagttaataaattagaatc 1797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1738 attgattgttgatcaaaaatctttagataaggttcaagagaaagttaataaattagaatc 1797


Query: 1798 tgaagttcaagaaattcaaaacagtatcttaaatgttggtggtccacaattgaaaatgca 1857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1798 tgaagttcaagaaattcaaaacagtatcttaaatgttggtggtccacaattgaaaatgca 1857


Query: 1858 aaagaataaagttgaatcacttcaatctagaattgattcaaaccaaaccaacactaccaa 1917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1858 aaagaataaagttgaatcacttcaatctagaattgattcaaaccaaaccaacactaccaa 1917


Query: 1918 agcaaatgtt 1927
||||||||||
Sbjct: 1918 agcaaatgtt 1927


Score = 256 bits (129), Expect = 9e-68
Identities = 135/135 (100%)
Strand = Plus / Plus


Query: 1991 gaaaaggatgagaatgaagcagcattagcagagattctagagaaatataaatcattggag 2050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1991 gaaaaggatgagaatgaagcagcattagcagagattctagagaaatataaatcattggag 2050


Query: 2051 aaagagaatcttaaagccactgaagcaaggaagctgtctcgaacaacttcgnaaaggaag 2110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2051 aaagagaatcttaaagccactgaagcaaggaagctgtctcgaacaacttcgnaaaggaag 2110


Query: 2111 naagaaaccaaagaa 2125
|||||||||||||||
Sbjct: 2111 naagaaaccaaagaa 2125


Score = 178 bits (90), Expect = 2e-44
Identities = 104/111 (93%)
Strand = Plus / Plus


Query: 219 acaccaaaaaagccaatgcctccacctcaatctaaagcaaaaccttcctcacaaccacca 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 acaccaaaaaagccaatgcctccacctcaatctaaagcaaaaccttcctcacaaccacca 278


Query: 279 gatatnnnnnnngcatcacaacaatcacaaacacaaaagaatacgccccca 329
||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gatataaaaaaagcatcacaacaatcacaaacacaaaagaatacgccccca 329


Score = 151 bits (76), Expect = 4e-36
Identities = 76/76 (100%)
Strand = Plus / Plus


Query: 12 ctttcacttttcgaaaacaaatataaaatggtagaagatgaagaaataaatgatcaaata 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ctttcacttttcgaaaacaaatataaaatggtagaagatgaagaaataaatgatcaaata 71


Query: 72 tctgaagaagaagaag 87
||||||||||||||||
Sbjct: 72 tctgaagaagaagaag 87


Score = 36.2 bits (18), Expect = 0.15
Identities = 24/26 (92%)
Strand = Plus / Plus


Query: 441 caatcatcacaaacatcacaaacatc 466
|||||||||||| |||||||| ||||
Sbjct: 354 caatcatcacaatcatcacaatcatc 379


>Contig-U12114-1 (Contig-U12114-1Q) /CSM_Contig/Contig-U12114-1Q.Seq.d
Length = 2252

Score = 42.1 bits (21), Expect = 0.002
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 292 catcacaacaatcacaaacac 312
|||||||||||||||||||||
Sbjct: 215 catcacaacaatcacaaacac 235


>Contig-U07842-1 (Contig-U07842-1Q) /CSM_Contig/Contig-U07842-1Q.Seq.d
Length = 1361

Score = 38.2 bits (19), Expect = 0.038
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 1461 aagaagataaaaagaaatt 1479
|||||||||||||||||||
Sbjct: 515 aagaagataaaaagaaatt 533


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 20,853
Number of Sequences: 6905
Number of extensions: 20853
Number of successful extensions: 2439
Number of sequences better than 10.0: 229
length of query: 2125
length of database: 5,674,871
effective HSP length: 16
effective length of query: 2109
effective length of database: 5,564,391
effective search space: 11735300619
effective search space used: 11735300619
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.23
Homology vs DNA
Query= Contig-U11313-1 (Contig-U11313-1Q) /CSM_Contig/Contig-U11313-1Q.Seq.d
(2125 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ354204) Dictyostelium discoideum cDNA clone:dda52k20, 3' ... 1146 0.0 3
(BJ350927) Dictyostelium discoideum cDNA clone:dda41p09, 3' ... 1140 0.0 1
(BJ409183) Dictyostelium discoideum cDNA clone:dds39c23, 3' ... 938 0.0 2
(BJ351108) Dictyostelium discoideum cDNA clone:dda42g02, 3' ... 938 0.0 2
(BJ350650) Dictyostelium discoideum cDNA clone:dda40h13, 3' ... 591 0.0 4
(BJ333269) Dictyostelium discoideum cDNA clone:dda42g02, 5' ... 375 e-148 4
(BJ395679) Dictyostelium discoideum cDNA clone:dds39c23, 5' ... 369 e-144 3
(BJ396048) Dictyostelium discoideum cDNA clone:dds41n05, 5' ... 268 e-117 4
(BJ336143) Dictyostelium discoideum cDNA clone:dda52k20, 5' ... 218 7e-99 3
(BJ333103) Dictyostelium discoideum cDNA clone:dda41p09, 5' ... 204 1e-95 4
(BJ332716) Dictyostelium discoideum cDNA clone:dda40h13, 5' ... 182 2e-91 4
(BJ333441) Dictyostelium discoideum cDNA clone:dda42b22, 5' ... 180 1e-87 3
(DT614772) ACAH-aaa10e10.g1 Hydra_EST_UCI-10 Hydra magnipapi... 62 1e-05 2
(DJ210002) Method for identification of useful proteins deri... 58 2e-05 2
(EA397178) Sequence 46002 from patent US 7314974. 58 2e-05 2
(Z73258) S.cerevisiae chromosome XII reading frame ORF YLR086w. 58 2e-05 2
(U53880) Saccharomyces cerevisiae chromosome XII cosmid 9449. 58 5e-05 3
(DT618342) ACAH-aab09d03.g1 Hydra_EST_UCI-10 Hydra magnipapi... 62 9e-05 1
(DT617205) ACAH-aaa47e04.g1 Hydra_EST_UCI-10 Hydra magnipapi... 62 9e-05 1
(CB287984) CMD71_D05_43 UMNMPM3 Sus scrofa cDNA clone PPSUBL... 48 2e-04 2
(FC732004) CBBG699.fwd CBBG Lottia gigantea 12,15,18h embryo... 60 4e-04 1
(FC732003) CBBG699.rev CBBG Lottia gigantea 12,15,18h embryo... 60 4e-04 1
(FC676712) CAXX11510.fwd CAXX Lottia gigantea from male gona... 60 4e-04 1
(AJ488495) Oryza sativa mRNA for SMC4 protein. 46 0.001 2
(CL971593) OsIFCC021683 Oryza sativa Express Library Oryza s... 46 0.001 2
(AY579200) Tetrahymena thermophila condensin subunit (SMC4) ... 50 0.001 4
(DJ025880) Genome-wide DNA marker of Saccharomyces cerevisiae. 58 0.001 1
(AX832382) Sequence 3102 from Patent WO03072602. 58 0.001 1
(AX821352) Sequence 3102 from Patent EP1338608. 58 0.001 1
(AX596918) Sequence 2572 from Patent EP1258494. 58 0.001 1
(EK490307) 1095505015570 Global-Ocean-Sampling_GS-32-01-01-1... 58 0.001 1
(FG655938) G1142P315FK20.T0 Anolis carolinensis pooled norma... 58 0.001 1
(EJ470421) 1095403407272 Global-Ocean-Sampling_GS-28-01-01-1... 56 0.006 1
(EY492772) CBBP19089.fwd CBBP Hirudo medicinalis hermaphrodi... 44 0.011 2
(EJ961517) 1093022006285 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.089 1
(EJ943484) 1093018900905 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.089 1
(EA694236) Sequence 73115 from patent US 7365185. 40 0.31 2
(AL401576) T7 end of clone AS0AA028G03 of library AS0AA from... 50 0.35 1
(EK372267) 1095469422883 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.35 1
(EK191408) 1095460020242 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.35 1
(EK076763) 1092961052138 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.35 1
(CX579913) TTE00035105 Amplicon Express - Conjugative Form T... 50 0.35 1
(CN592282) TTE00013195 Normalized large Tetrahymena thermoph... 50 0.35 1
(AZ931890) 474.dhz91f07.s1 Saccharomyces unisporus NRRL Y-15... 48 0.39 2
(ES469147) PC-F01 Brachionus plicatilis NHIL unnormalized cD... 42 0.71 3
(BJ979945) Brachionus plicatilis NH1L mRNA, clone: BpA0476, ... 42 0.71 3
(BJ338737) Dictyostelium discoideum cDNA clone:dda62f20, 5' ... 46 1.4 2
(BX640580) Zebrafish DNA sequence from clone CH211-278A6 in ... 48 1.4 1
(CR382134) Debaryomyces hansenii chromosome B of strain CBS7... 48 1.4 1
(CU466375) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 1.4 1
(CR940348) Theileria annulata genomic DNA chromosome 2. 48 1.4 1
(BX640543) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 48 1.4 1
(BX640541) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 1.4 1
(FI068869) CHO_OF7311xc24f1.ab1 CHO_OF7 Nicotiana tabacum ge... 48 1.4 1
(EK420059) 1095515500108 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.4 1
(EK317780) 1095462419197 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.4 1
(EK295425) 1095462345919 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.4 1
(EK111061) 1092963110429 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.4 1
(EK031720) 1092955415407 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.4 1
(EK019348) 1092955264497 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.4 1
(EK010137) 1092955162972 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.4 1
(EJ252165) 1095344039866 Global-Ocean-Sampling_GS-27-01-01-1... 48 1.4 1
(AL668204) Ciona intestinalis; larval mRNA; EST 5PRIM end of... 48 1.4 1
(AL667271) Ciona intestinalis; larval mRNA; EST 5PRIM end of... 48 1.4 1
(AL667250) Ciona intestinalis; larval mRNA; EST 5PRIM end of... 48 1.4 1
(AL666914) Ciona intestinalis; larval mRNA; EST 5PRIM end of... 48 1.4 1
(AL665517) Ciona intestinalis; larval mRNA; EST 3PRIM end of... 48 1.4 1
(AL665052) Ciona intestinalis; larval mRNA; EST 3PRIM end of... 48 1.4 1
(AJ495395) Ciona intestinalis EST, clone CION02114. 48 1.4 1
(AJ495249) Ciona intestinalis EST, clone CION01933. 48 1.4 1
(CF787094) 854959 MARC 4PIG Sus scrofa cDNA 5', mRNA sequence. 48 1.4 1
(BW472519) Ciona intestinalis cDNA, clone:cijv011k24, 3'end,... 48 1.4 1
(BW465304) Ciona intestinalis cDNA, clone:cijv046j08, 3'end,... 48 1.4 1
(BW465089) Ciona intestinalis cDNA, clone:cijv045p05, 3'end,... 48 1.4 1
(BW464043) Ciona intestinalis cDNA, clone:cijv042n15, 3'end,... 48 1.4 1
(BW463745) Ciona intestinalis cDNA, clone:cijv041p17, 3'end,... 48 1.4 1
(BW463737) Ciona intestinalis cDNA, clone:cijv041p09, 3'end,... 48 1.4 1
(BW463706) Ciona intestinalis cDNA, clone:cijv041n20, 3'end,... 48 1.4 1
(BW463555) Ciona intestinalis cDNA, clone:cijv041g11, 3'end,... 48 1.4 1
(BW462266) Ciona intestinalis cDNA, clone:cijv039n08, 3'end,... 48 1.4 1
(BW462076) Ciona intestinalis cDNA, clone:cijv039e10, 3'end,... 48 1.4 1
(BW460654) Ciona intestinalis cDNA, clone:cijv035b18, 3'end,... 48 1.4 1
(BW459966) Ciona intestinalis cDNA, clone:cijv033b05, 3'end,... 48 1.4 1
(BW458991) Ciona intestinalis cDNA, clone:cijv030e06, 3'end,... 48 1.4 1
(BW458169) Ciona intestinalis cDNA, clone:cijv027n07, 3'end,... 48 1.4 1
(BW458147) Ciona intestinalis cDNA, clone:cijv027m06, 3'end,... 48 1.4 1
(BW458118) Ciona intestinalis cDNA, clone:cijv027k19, 3'end,... 48 1.4 1
(BW457775) Ciona intestinalis cDNA, clone:cijv026l02, 3'end,... 48 1.4 1
(BW456627) Ciona intestinalis cDNA, clone:cijv023g14, 3'end,... 48 1.4 1
(BW456584) Ciona intestinalis cDNA, clone:cijv023e14, 3'end,... 48 1.4 1
(BW454966) Ciona intestinalis cDNA, clone:cijv007h05, 3'end,... 48 1.4 1
(BW453013) Ciona intestinalis cDNA, clone:cijv001i16, 3'end,... 48 1.4 1
(BW452607) Ciona intestinalis cDNA, clone:cijv019e22, 3'end,... 48 1.4 1
(BW452042) Ciona intestinalis cDNA, clone:cijv017l02, 3'end,... 48 1.4 1
(BW448541) Ciona intestinalis cDNA, clone:cijv011k24, 5'end,... 48 1.4 1
(BW441536) Ciona intestinalis cDNA, clone:cijv045p05, 5'end,... 48 1.4 1
(BW440480) Ciona intestinalis cDNA, clone:cijv042n15, 5'end,... 48 1.4 1
(BW436590) Ciona intestinalis cDNA, clone:cijv035b18, 5'end,... 48 1.4 1
(BW435887) Ciona intestinalis cDNA, clone:cijv033b05, 5'end,... 48 1.4 1
(BW434930) Ciona intestinalis cDNA, clone:cijv030e06, 5'end,... 48 1.4 1

>(BJ354204) Dictyostelium discoideum cDNA clone:dda52k20, 3' end,
single read.
Length = 778

Score = 1146 bits (578), Expect(3) = 0.0
Identities = 578/578 (100%)
Strand = Plus / Minus


Query: 672 aaagatttccaatggtgcaactcaaaatttagatgatgcaatcaaagcactagaggatgc 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 aaagatttccaatggtgcaactcaaaatttagatgatgcaatcaaagcactagaggatgc 719


Query: 732 caaaaccatttcatccactcgtaagaataatatcaccaaatcaaagaaggagttggaatc 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 caaaaccatttcatccactcgtaagaataatatcaccaaatcaaagaaggagttggaatc 659


Query: 792 ggttaaagcaattatagtggatcttgagaaaagacttgcaagtggtaaagtcaccgaaga 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ggttaaagcaattatagtggatcttgagaaaagacttgcaagtggtaaagtcaccgaaga 599


Query: 852 gaatctctatagaaatacaatggatgccaagagacaattggaacaaattaagaccaatct 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gaatctctatagaaatacaatggatgccaagagacaattggaacaaattaagaccaatct 539


Query: 912 ctctgaaaatagttcaagaaacactatattggatcgtttattaaagattaaagaaagtgg 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ctctgaaaatagttcaagaaacactatattggatcgtttattaaagattaaagaaagtgg 479


Query: 972 tcaaattagtggtattcatggtagattgggtgatttgggtgcaatcgatcaaaagtatga 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tcaaattagtggtattcatggtagattgggtgatttgggtgcaatcgatcaaaagtatga 419


Query: 1032 tgttgccatctctactgctgccttctcacaaatggataatatcattgtagagacaacagc 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tgttgccatctctactgctgccttctcacaaatggataatatcattgtagagacaacagc 359


Query: 1092 agccgccgaagcatgtgttgaactattacgtaaggagaatttaggtagagctacatttat 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 agccgccgaagcatgtgttgaactattacgtaaggagaatttaggtagagctacatttat 299


Query: 1152 gatcttggagaatttagaatatcaacgtcaaaatcttggtccagttcaaacaccaaataa 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gatcttggagaatttagaatatcaacgtcaaaatcttggtccagttcaaacaccaaataa 239


Query: 1212 tacaccacgtctatttgatttaataaagatgaaagatg 1249
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tacaccacgtctatttgatttaataaagatgaaagatg 201

Score = 297 bits (150), Expect(3) = 0.0
Identities = 150/150 (100%)
Strand = Plus / Minus


Query: 1257 gtatgcaaccgcctttttcactgcagttggtcatactttggttgctgatactttggatga 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gtatgcaaccgcctttttcactgcagttggtcatactttggttgctgatactttggatga 134


Query: 1317 agcaaccaaaatagcctatggagcaaaaagacatcgtgttgtaactttggatggttcact 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 agcaaccaaaatagcctatggagcaaaaagacatcgtgttgtaactttggatggttcact 74


Query: 1377 cattgacactagtggtgcaatgagtggtgg 1406
||||||||||||||||||||||||||||||
Sbjct: 73 cattgacactagtggtgcaatgagtggtgg 44

Score = 50.1 bits (25), Expect(3) = 0.0
Identities = 25/25 (100%)
Strand = Plus / Minus


Query: 1408 ggtctcaaaccaagagttggtgcaa 1432
|||||||||||||||||||||||||
Sbjct: 43 ggtctcaaaccaagagttggtgcaa 19

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,904,277,454
Number of extensions: 111770440
Number of successful extensions: 8394592
Number of sequences better than 10.0: 166
Length of query: 2125
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 2101
Effective length of database: 97,308,875,965
Effective search space: 204445948402465
Effective search space used: 204445948402465
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 6.29
Homology vs Protein
Query= Contig-U11313-1 (Contig-U11313-1Q) /CSM_Contig/Contig-U11313-1Q.Seq.d
(2125 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54LV0) RecName: Full=Structural maintenance of chromosomes pro... 468 0.0
(Q9FJL0) RecName: Full=Structural maintenance of chromosomes pro... 183 1e-63
AJ488495_1(AJ488495|pid:none) Oryza sativa mRNA for SMC4 protein. 182 2e-58
AM270136_8(AM270136|pid:none) Aspergillus niger contig An07c0190... 188 8e-58
CU633865_131(CU633865|pid:none) Podospora anserina genomic DNA c... 175 1e-57
D30788_1(D30788|pid:none) Schizosaccharomyces pombe gene for cut... 190 1e-57
(P41004) RecName: Full=Structural maintenance of chromosomes pro... 190 1e-57
AP007171_424(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 189 4e-56
CU928175_63(CU928175|pid:none) Zygosaccharomyces rouxii strain C... 179 2e-53
AE016820_457(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 175 2e-52
(Q12267) RecName: Full=Structural maintenance of chromosomes pro... 168 3e-51
CU928171_576(CU928171|pid:none) Kluyveromyces thermotolerans str... 167 2e-50
CR380958_523(CR380958|pid:none) Candida glabrata strain CBS138 c... 159 4e-46
AF092564_1(AF092564|pid:none) Homo sapiens chromosome-associated... 183 2e-44
AK128143_1(AK128143|pid:none) Homo sapiens cDNA FLJ46264 fis, cl... 181 9e-44
AL136877_1(AL136877|pid:none) Homo sapiens mRNA; cDNA DKFZp434F2... 181 9e-44
(Q9NTJ3) RecName: Full=Structural maintenance of chromosomes pro... 181 9e-44
AK122939_1(AK122939|pid:none) Homo sapiens cDNA FLJ16648 fis, cl... 180 2e-43
AL833949_1(AL833949|pid:none) Homo sapiens mRNA; cDNA DKFZp434N2... 178 6e-43
AF160943_1(AF160943|pid:none) Drosophila melanogaster LD20207 fu... 176 3e-42
AE014134_2849(AE014134|pid:none) Drosophila melanogaster chromos... 176 3e-42
AY579200_1(AY579200|pid:none) Tetrahymena thermophila condensin ... 174 9e-42
AY099521_1(AY099521|pid:none) Danio rerio structural maintenance... 167 1e-39
CR382126_820(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 167 1e-39
CP000586_124(CP000586|pid:none) Ostreococcus lucimarinus CCE9901... 166 2e-39
CR932234_1(CR932234|pid:none) Structural maintenance of chromoso... 125 6e-39
AJ535206_1(AJ535206|pid:none) Anopheles gambiae mRNA for SMC4 pr... 162 6e-38
CR382129_710(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 160 2e-37
CR954206_143(CR954206|pid:none) Ostreococcus tauri strain OTTH05... 159 4e-37
FN392320_892(FN392320|pid:none) Pichia pastoris GS115 chromosome... 149 3e-34
FN357846_1(FN357846|pid:none) Schistosoma mansoni genome sequenc... 141 1e-31
AJ719507_1(AJ719507|pid:none) Gallus gallus mRNA for hypothetica... 77 4e-29
EU415462_1(EU415462|pid:none) Drosophila melanogaster clone GLU_... 120 2e-25
EU415469_1(EU415469|pid:none) Drosophila melanogaster clone GLU_... 120 2e-25
EU415460_1(EU415460|pid:none) Drosophila melanogaster clone GLU_... 120 2e-25
EU415466_1(EU415466|pid:none) Drosophila melanogaster clone GLU_... 120 2e-25
EU415467_1(EU415467|pid:none) Drosophila melanogaster clone GLU_... 120 2e-25
EU415456_1(EU415456|pid:none) Drosophila melanogaster clone GLU_... 120 2e-25
EU415474_1(EU415474|pid:none) Drosophila melanogaster clone GLU_... 120 2e-25
EU415481_1(EU415481|pid:none) Drosophila melanogaster clone GLU_... 120 2e-25
EU415455_1(EU415455|pid:none) Drosophila melanogaster clone GLU_... 120 2e-25
EU415475_1(EU415475|pid:none) Drosophila melanogaster clone GLU_... 120 2e-25
EU415471_1(EU415471|pid:none) Drosophila melanogaster clone GLU_... 120 2e-25
EU415470_1(EU415470|pid:none) Drosophila melanogaster clone GLU_... 120 3e-25
EU415464_1(EU415464|pid:none) Drosophila melanogaster clone GLU_... 119 3e-25
EU415459_1(EU415459|pid:none) Drosophila melanogaster clone GLU_... 119 6e-25
EU415480_1(EU415480|pid:none) Drosophila melanogaster clone GLU_... 117 1e-24
BA000001_1852(BA000001|pid:none) Pyrococcus horikoshii OT3 DNA, ... 83 2e-24
AJ248284_61(AJ248284|pid:none) Pyrococcus abyssi complete genome... 89 6e-24
AM180088_269(AM180088|pid:none) Haloquadratum walsbyi DSM 16790 ... 91 3e-23
AL590447_68(AL590447|pid:none) chromosome VII of strain GB-M1 of... 109 3e-22
CP000724_2658(CP000724|pid:none) Alkaliphilus metalliredigens QY... 75 2e-21
CP000745_636(CP000745|pid:none) Methanococcus maripaludis C7, co... 87 1e-20
AE008384_1031(AE008384|pid:none) Methanosarcina mazei strain Goe... 79 2e-20
AE000657_451(AE000657|pid:none) Aquifex aeolicus VF5, complete g... 76 5e-20
CP000939_2369(CP000939|pid:none) Clostridium botulinum B1 str. O... 78 1e-19
CP000726_2220(CP000726|pid:none) Clostridium botulinum A str. AT... 78 1e-19
CP001581_2583(CP001581|pid:none) Clostridium botulinum A2 str. K... 78 1e-19
AP006716_1680(AP006716|pid:none) Staphylococcus haemolyticus JCS... 83 1e-19
CP000728_2381(CP000728|pid:none) Clostridium botulinum F str. La... 76 5e-19
BX950229_1397(BX950229|pid:none) Methanococcus maripaludis strai... 81 7e-19
AE015929_909(AE015929|pid:none) Staphylococcus epidermidis ATCC ... 80 9e-19
CR954253_1334(CR954253|pid:none) Lactobacillus delbrueckii subsp... 73 3e-18
CP000923_1678(CP000923|pid:none) Thermoanaerobacter sp. X514, co... 75 4e-18
CP000029_783(CP000029|pid:none) Staphylococcus epidermidis RP62A... 80 4e-18
CP000477_1140(CP000477|pid:none) Methanosaeta thermophila PT, co... 96 7e-18
CP000412_1114(CP000412|pid:none) Lactobacillus delbrueckii subsp... 71 2e-17
AY567966_1(AY567966|pid:none) Arabidopsis thaliana structural ma... 94 2e-17
AM114193_879(AM114193|pid:none) Uncultured methanogenic archaeon... 93 4e-17
CP000300_1382(CP000300|pid:none) Methanococcoides burtonii DSM 6... 92 1e-16
CP000557_1035(CP000557|pid:none) Geobacillus thermodenitrificans... 72 1e-16
CP000583_374(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 91 2e-16
AP008231_2048(AP008231|pid:none) Synechococcus elongatus PCC 630... 91 2e-16
CP000100_2043(CP000100|pid:none) Synechococcus elongatus PCC 794... 91 2e-16
AM778958_371(AM778958|pid:none) Microcystis aeruginosa PCC 7806 ... 90 3e-16
BX571856_1184(BX571856|pid:none) Staphylococcus aureus subsp. au... 90 4e-16
BA000033_1117(BA000033|pid:none) Staphylococcus aureus subsp. au... 89 5e-16
AP009324_1225(AP009324|pid:none) Staphylococcus aureus subsp. au... 89 5e-16
AJ543651_1(AJ543651|pid:none) Synechococcus sp. PCC 7002 smc gen... 89 6e-16
AE017333_1719(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 72 1e-15
BA000039_1924(BA000039|pid:none) Thermosynechococcus elongatus B... 88 1e-15
AE004437_269(AE004437|pid:none) Halobacterium sp. NRC-1, complet... 88 1e-15
AP009552_1107(AP009552|pid:none) Microcystis aeruginosa NIES-843... 87 2e-15
AJ938182_1098(AJ938182|pid:none) Staphylococcus aureus RF122 com... 87 2e-15
AP009351_1150(AP009351|pid:none) Staphylococcus aureus subsp. au... 87 2e-15
AY528742_1(AY528742|pid:none) Trypanosoma cruzi structural maint... 87 3e-15
CP000411_406(CP000411|pid:none) Oenococcus oeni PSU-1, complete ... 77 4e-15
CP000393_1301(CP000393|pid:none) Trichodesmium erythraeum IMS101... 86 4e-15
CP001022_1868(CP001022|pid:none) Exiguobacterium sibiricum 255-1... 86 4e-15
CP001287_1414(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 86 4e-15
AL138650_3(AL138650|pid:none) Arabidopsis thaliana DNA chromosom... 86 7e-15
CP000240_2860(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-1... 86 7e-15
CP000825_70(CP000825|pid:none) Prochlorococcus marinus str. MIT ... 85 9e-15
A64505(A64505)P115 homolog - Methanococcus jannaschii 85 9e-15
CP000780_2175(CP000780|pid:none) Candidatus Methanoregula boonei... 84 2e-14
AP009484_820(AP009484|pid:none) Macrococcus caseolyticus JCSC540... 84 2e-14
CP001100_7(CP001100|pid:none) Chloroherpeton thalassium ATCC 351... 60 2e-14
BC142745_1(BC142745|pid:none) Danio rerio structural maintenance... 84 2e-14
AP008971_846(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 84 3e-14
BC123312_1(BC123312|pid:none) Xenopus laevis cDNA clone IMAGE:83... 83 3e-14
BC107944_1(BC107944|pid:none) Rattus norvegicus structural maint... 83 3e-14
CR942434_1(CR942434|pid:none) Xenopus tropicalis finished cDNA, ... 83 3e-14
BC056009_1(BC056009|pid:none) Xenopus laevis (XCAP-C), mRNA (cDN... 83 3e-14
BC044679_1(BC044679|pid:none) Xenopus laevis (XCAP-C), mRNA (cDN... 83 3e-14
BC118122_1(BC118122|pid:none) Bos taurus structural maintenance ... 83 3e-14
CP001344_134(CP001344|pid:none) Cyanothece sp. PCC 7425, complet... 83 5e-14
AM180355_1291(AM180355|pid:none) Clostridium difficile 630 compl... 82 6e-14
CP000422_792(CP000422|pid:none) Pediococcus pentosaceus ATCC 257... 82 6e-14
AP008230_2655(AP008230|pid:none) Desulfitobacterium hafniense Y5... 82 8e-14
AJ543643_1(AJ543643|pid:none) Desulfitobacterium hafniense SMC g... 82 8e-14
AD1672(AD1672) Smc protein essential for chromosome condensation... 82 8e-14
BC129314_1(BC129314|pid:none) Danio rerio structural maintenance... 82 1e-13
AJ535209_1(AJ535209|pid:none) Oryza sativa mRNA for SMC1 protein. 82 1e-13
CP000609_181(CP000609|pid:none) Methanococcus maripaludis C5, co... 81 1e-13
AJ543646_1(AJ543646|pid:none) Geobacillus stearothermophilus smc... 69 2e-13
CP000568_919(CP000568|pid:none) Clostridium thermocellum ATCC 27... 81 2e-13
AY648730_1(AY648730|pid:none) Danio rerio chromosome adhesion pr... 81 2e-13
CT978603_337(CT978603|pid:none) Synechococcus sp. RCC307 genomic... 81 2e-13
AF026198_3(AF026198|pid:none) Fugu rubripes neural cell adhesion... 80 4e-13
AP007281_1091(AP007281|pid:none) Lactobacillus reuteri JCM 1112 ... 79 5e-13
(O93308) RecName: Full=Structural maintenance of chromosomes pro... 79 5e-13
AF225909_1(AF225909|pid:none) Drosophila melanogaster cohesin su... 79 5e-13
BC046691_1(BC046691|pid:none) Xenopus laevis SMC-like 1 (yeast),... 79 5e-13
AE014297_3597(AE014297|pid:none) Drosophila melanogaster chromos... 79 5e-13
CR954203_372(CR954203|pid:none) Ostreococcus tauri strain OTTH05... 79 7e-13
CP001098_719(CP001098|pid:none) Halothermothrix orenii H 168, co... 79 7e-13
CP000117_4660(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 79 7e-13
AD1300(AD1300) Smc protein essential for chromosome condensation... 79 9e-13
AP006627_2289(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 79 9e-13
CP000743_970(CP000743|pid:none) Methanococcus aeolicus Nankai-3,... 79 9e-13
AE017262_1811(AE017262|pid:none) Listeria monocytogenes str. 4b ... 79 9e-13
CP001323_23(CP001323|pid:none) Micromonas sp. RCC299 chromosome ... 79 9e-13
FM992695_330(FM992695|pid:none) Candida dubliniensis CD36 chromo... 78 1e-12
CP001229_945(CP001229|pid:none) Sulfurihydrogenibium azorense Az... 78 1e-12
AE1947(AE1947) chromosome segregation protein [imported] - Nosto... 78 1e-12
CP001576_356(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 78 1e-12
BX640922_1(BX640922|pid:none) Homo sapiens mRNA; cDNA DKFZp686L1... 78 1e-12
AE002114_13(AE002114|pid:none) Ureaplasma parvum serovar 3 str. ... 78 1e-12
(Q9Z1M9) RecName: Full=Structural maintenance of chromosomes pro... 77 2e-12
(Q14683) RecName: Full=Structural maintenance of chromosomes pro... 77 2e-12
AK291921_1(AK291921|pid:none) Homo sapiens cDNA FLJ77162 partial... 77 2e-12
BC003279_1(BC003279|pid:none) Mus musculus structural maintenanc... 77 2e-12
BC064368_1(BC064368|pid:none) Homo sapiens structural maintenanc... 77 2e-12
(O97593) RecName: Full=Structural maintenance of chromosomes pro... 77 2e-12
I54383(I54383) chromosome segregation protein smc1 [similarity] ... 77 2e-12
AK301266_1(AK301266|pid:none) Homo sapiens cDNA FLJ50250 complet... 77 2e-12
AL672180_7(AL672180|pid:none) Mouse DNA sequence from clone RP23... 77 2e-12
CP000562_1822(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 77 2e-12
AP008955_3621(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 77 3e-12
CP001083_2568(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 77 3e-12
AJ535203_1(AJ535203|pid:none) Anopheles gambiae mRNA for SMC1 pr... 77 3e-12
CP000095_102(CP000095|pid:none) Prochlorococcus marinus str. NAT... 76 6e-12
CT971583_2124(CT971583|pid:none) Synechococcus WH7803 complete g... 76 6e-12
CP001056_1175(CP001056|pid:none) Clostridium botulinum B str. Ek... 75 7e-12
AP008934_1535(AP008934|pid:none) Staphylococcus saprophyticus su... 75 7e-12
CP000099_578(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 75 7e-12
CP000813_1476(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 75 1e-11
CP000382_1316(CP000382|pid:none) Clostridium novyi NT, complete ... 75 1e-11
AE017344_284(AE017344|pid:none) Cryptococcus neoformans var. neo... 74 2e-11
CP001037_5238(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 74 2e-11
BX548174_61(BX548174|pid:none) Prochlorococcus marinus MED4 comp... 74 2e-11
CP000023_1196(CP000023|pid:none) Streptococcus thermophilus LMG ... 74 2e-11
CP000419_1059(CP000419|pid:none) Streptococcus thermophilus LMD-... 74 2e-11
CP000024_1219(CP000024|pid:none) Streptococcus thermophilus CNRZ... 74 2e-11
AF426167_1(AF426167|pid:none) Lactococcus lactis SMC protein gen... 74 2e-11
AE005176_803(AE005176|pid:none) Lactococcus lactis subsp. lactis... 74 2e-11
AJ534332_1(AJ534332|pid:none) Takifugu rubripes mRNA for SMC1 be... 74 2e-11
CP000702_1548(CP000702|pid:none) Thermotoga petrophila RKU-1, co... 74 3e-11
CP000413_755(CP000413|pid:none) Lactobacillus gasseri ATCC 33323... 74 3e-11
CP000559_1003(CP000559|pid:none) Methanocorpusculum labreanum Z,... 74 3e-11
CP001047_521(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 73 4e-11
AJ534335_1(AJ534335|pid:none) Gallus gallus mRNA for SMC1 protein. 73 4e-11
AE017342_264(AE017342|pid:none) Cryptococcus neoformans var. neo... 73 4e-11
(O94383) RecName: Full=Structural maintenance of chromosomes pro... 73 4e-11
CP000589_198(CP000589|pid:none) Ostreococcus lucimarinus CCE9901... 73 4e-11
CP000502_245(CP000502|pid:none) Pichia stipitis CBS 6054 chromos... 73 5e-11
CP000227_3532(CP000227|pid:none) Bacillus cereus Q1, complete ge... 73 5e-11
AE017244_677(AE017244|pid:none) Mycoplasma hyopneumoniae 7448, c... 72 6e-11
CP000425_777(CP000425|pid:none) Lactococcus lactis subsp. cremor... 72 6e-11
CR954209_212(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 72 6e-11
CR382138_863(CR382138|pid:none) Debaryomyces hansenii strain CBS... 72 6e-11
CP000916_1394(CP000916|pid:none) Thermotoga neapolitana DSM 4359... 72 8e-11
CP001130_480(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, co... 72 8e-11
AL445565_187(AL445565|pid:none) Mycoplasma pulmonis (strain UAB ... 72 8e-11
CP000435_2410(CP000435|pid:none) Synechococcus sp. CC9311, compl... 72 8e-11
CP000903_3573(CP000903|pid:none) Bacillus weihenstephanensis KBA... 72 8e-11
CP000033_1216(CP000033|pid:none) Lactobacillus acidophilus NCFM,... 72 8e-11
CP000485_3292(CP000485|pid:none) Bacillus thuringiensis str. Al ... 72 1e-10
AE017194_3859(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 72 1e-10
AE016879_3656(AE016879|pid:none) Bacillus anthracis str. Ames, c... 72 1e-10
CP001283_3772(CP001283|pid:none) Bacillus cereus AH820, complete... 72 1e-10
CP001078_1122(CP001078|pid:none) Clostridium botulinum E3 str. A... 72 1e-10
AJ543649_1(AJ543649|pid:none) Pyrococcus furiosus smc gene. 71 1e-10
CP001107_1444(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 70 2e-10
AE017198_1308(AE017198|pid:none) Lactobacillus johnsonii NCC 533... 70 2e-10
AY528744_1(AY528744|pid:none) Trypanosoma cruzi structural maint... 70 2e-10
CP000806_3293(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 70 2e-10
BA000011_821(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA,... 70 3e-10
CP000081_347(CP000081|pid:none) Leishmania major chromosome 35, ... 70 3e-10
CP001176_3794(CP001176|pid:none) Bacillus cereus B4264, complete... 70 3e-10
CP001034_1349(CP001034|pid:none) Natranaerobius thermophilus JW/... 70 3e-10
AE016877_3658(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 70 3e-10
DQ489736_1287(DQ489736|pid:none) Leuconostoc citreum KM20, compl... 70 3e-10
CP000969_1610(CP000969|pid:none) Thermotoga sp. RQ2, complete ge... 70 3e-10
CP000414_1484(CP000414|pid:none) Leuconostoc mesenteroides subsp... 70 4e-10
CP001615_2868(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 70 4e-10
AP008937_1237(AP008937|pid:none) Lactobacillus fermentum IFO 395... 70 4e-10
AM494971_344(AM494971|pid:none) Leishmania braziliensis chromoso... 69 5e-10
CP000885_2413(CP000885|pid:none) Clostridium phytofermentans ISD... 69 5e-10
CP000097_421(CP000097|pid:none) Synechococcus sp. CC9902, comple... 69 7e-10
CP001186_3860(CP001186|pid:none) Bacillus cereus G9842, complete... 69 7e-10
AE017308_411(AE017308|pid:none) Mycoplasma mobile 163K complete ... 69 7e-10
AE017126_71(AE017126|pid:none) Prochlorococcus marinus subsp. ma... 69 9e-10
CP000246_1928(CP000246|pid:none) Clostridium perfringens ATCC 13... 68 1e-09
(P32908) RecName: Full=Structural maintenance of chromosomes pro... 68 1e-09
CP001104_1013(CP001104|pid:none) Eubacterium eligens ATCC 27750,... 68 1e-09
CP000141_1403(CP000141|pid:none) Carboxydothermus hydrogenoforma... 67 2e-09
CP000679_1546(CP000679|pid:none) Caldicellulosiruptor saccharoly... 67 2e-09
AP007151_1246(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 67 2e-09
AJ504805_1(AJ504805|pid:none) Arabidopsis thaliana mRNA for SMC3... 67 3e-09
AE017332_671(AE017332|pid:none) Mycoplasma hyopneumoniae 232, co... 67 3e-09
BA000016_1716(BA000016|pid:none) Clostridium perfringens str. 13... 67 3e-09
AK221283_1(AK221283|pid:none) Arabidopsis thaliana mRNA for puta... 67 3e-09
CP000879_1305(CP000879|pid:none) Petrotoga mobilis SJ95, complet... 67 3e-09
CP000725_761(CP000725|pid:none) Streptococcus gordonii str. Chal... 67 3e-09
A72287(A72287) hypothetical protein TM1182 - Thermotoga maritima... 66 4e-09
AM920435_699(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 66 4e-09
AL935256_224(AL935256|pid:none) Lactobacillus plantarum strain W... 66 4e-09
(P51834) RecName: Full=Chromosome partition protein smc; &G6970... 66 6e-09
(P47037) RecName: Full=Structural maintenance of chromosomes pro... 66 6e-09
AL009126_1651(AL009126|pid:none) Bacillus subtilis subsp. subtil... 66 6e-09
AM270003_32(AM270003|pid:none) Aspergillus niger contig An02c008... 52 7e-09
CR380952_79(CR380952|pid:none) Candida glabrata strain CBS138 ch... 65 1e-08
AM270032_9(AM270032|pid:none) Aspergillus niger contig An02c0380... 65 1e-08
CP000387_1480(CP000387|pid:none) Streptococcus sanguinis SK36, c... 64 2e-08
CR954206_147(CR954206|pid:none) Ostreococcus tauri strain OTTH05... 64 2e-08
BA000004_2487(BA000004|pid:none) Bacillus halodurans C-125 DNA, ... 64 2e-08
A57013(A57013;S44243) early endosome antigen 1 - human &L40157_... 64 3e-08
CP000922_1745(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 64 3e-08
AE016814_5(AE016814|pid:none) Ashbya gossypii (= Eremothecium go... 63 4e-08
AK227781_1(AK227781|pid:none) Arabidopsis thaliana mRNA for stru... 63 5e-08
AE015927_1098(AE015927|pid:none) Clostridium tetani E88, complet... 63 5e-08
CR382127_21(CR382127|pid:none) Yarrowia lipolytica strain CLIB12... 62 6e-08
CP001393_1103(CP001393|pid:none) Anaerocellum thermophilum DSM 6... 62 6e-08
AL445065_133(AL445065|pid:none) Thermoplasma acidophilum complet... 62 6e-08
AC007290_6(AC007290|pid:none) Arabidopsis thaliana chromosome 2 ... 62 6e-08
F84669(F84669)probable chromosome associated protein [imported] ... 62 6e-08
(Q15075) RecName: Full=Early endosome antigen 1; AltName: Full=E... 62 8e-08
BC055212_1(BC055212|pid:none) Danio rerio structural maintenance... 62 1e-07
FM211187_1084(FM211187|pid:none) Streptococcus pneumoniae ATCC 7... 62 1e-07
BT038496_1(BT038496|pid:none) Zea mays full-length cDNA clone ZM... 61 1e-07
CP000682_1709(CP000682|pid:none) Metallosphaera sedula DSM 5348,... 61 1e-07
CR382124_304(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 61 1e-07
CP000407_1182(CP000407|pid:none) Streptococcus suis 05ZYH33, com... 61 2e-07
CR382131_640(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 61 2e-07
AE017263_233(AE017263|pid:none) Mesoplasma florum L1 complete ge... 60 2e-07
AB077475_1(AB077475|pid:none) Rattus norvegicus mRNA for barmoti... 60 2e-07
AL590444_92(AL590444|pid:none) chromosome IV of strain GB-M1 of ... 60 3e-07
(P47540) RecName: Full=Protein P115 homolog; &CP000925_309(CP00... 60 3e-07
AK013648_1(AK013648|pid:none) Mus musculus adult male hippocampu... 60 4e-07
BC126823_1(BC126823|pid:none) Bos taurus structural maintenance ... 60 4e-07
AK017948_1(AK017948|pid:none) Mus musculus adult male thymus cDN... 60 4e-07
AX884842_1(AX884842|pid:none) Sequence 705 from Patent EP1033401. 60 4e-07
AF176781_1(AF176781|pid:none) Homo sapiens MSTP142 mRNA, complet... 60 4e-07
CP000921_908(CP000921|pid:none) Streptococcus pneumoniae Taiwan1... 60 4e-07
CP000359_818(CP000359|pid:none) Deinococcus geothermalis DSM 113... 60 4e-07
L49344_1(L49344|pid:none) Mus musculus leucine zipper protein 1 ... 60 4e-07
(Q8R4U7) RecName: Full=Leucine zipper protein 1; AltName: Full=L... 60 4e-07
(Q54G05) RecName: Full=Putative leucine-rich repeat-containing p... 60 4e-07
CU928178_155(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 60 4e-07
L03188_1(L03188|pid:none) Saccharomyces cerevisiae integrin anal... 60 4e-07
CP001047_343(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 60 4e-07
BC108194_1(BC108194|pid:none) Bos taurus structural maintenance ... 59 5e-07
FN392320_1000(FN392320|pid:none) Pichia pastoris GS115 chromosom... 59 5e-07
CU928165_102(CU928165|pid:none) Kluyveromyces thermotolerans str... 59 5e-07
AK046231_1(AK046231|pid:none) Mus musculus adult male corpora qu... 59 7e-07
BC021363_1(BC021363|pid:none) Mus musculus early endosome antige... 59 7e-07
(Q9ESV1) RecName: Full=Leucine zipper protein 1; AltName: Full=L... 59 7e-07
(P25386) RecName: Full=Intracellular protein transport protein U... 59 7e-07
X54378_1(X54378|pid:none) S.cerevisiae gene for Uso1 protein, in... 59 7e-07
CU928180_422(CU928180|pid:none) Kluyveromyces thermotolerans str... 59 7e-07
L01992_1(L01992|pid:none) Saccharomyces cerevisiae myosin-like p... 59 9e-07
T18356(T18356) membrane protein p120 - Mycoplasma hominis &X784... 59 9e-07
CP001114_959(CP001114|pid:none) Deinococcus deserti VCD115, comp... 59 9e-07
T34063(T34063)chromosome segregation protein smc1 F28B3.7 [simil... 59 9e-07
CP001033_1056(CP001033|pid:none) Streptococcus pneumoniae CGSP14... 59 9e-07
AF003136_9(AF003136|pid:none) Caenorhabditis elegans cosmid F28B... 59 9e-07
AY814543_1(AY814543|pid:none) Schistosoma japonicum SJCHGC07244 ... 58 1e-06
(Q9PTD7) RecName: Full=Cingulin; 58 1e-06
BC091650_1(BC091650|pid:none) Xenopus laevis cingulin, mRNA (cDN... 58 1e-06
AF207901_1(AF207901|pid:none) Xenopus laevis cingulin mRNA, comp... 58 1e-06
(P58301) RecName: Full=DNA double-strand break repair rad50 ATPa... 58 2e-06
(Q9UZC8) RecName: Full=DNA double-strand break repair rad50 ATPa... 58 2e-06
AB207974_1(AB207974|pid:none) Oryzias latipes SYCP1 mRNA for syn... 58 2e-06
AL844509_184(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 58 2e-06
AM910991_283(AM910991|pid:none) Plasmodium knowlesi strain H chr... 57 2e-06
AM910996_174(AM910996|pid:none) Plasmodium knowlesi strain H chr... 57 3e-06
BX293980_451(BX293980|pid:none) Mycoplasma mycoides subsp. mycoi... 57 3e-06
CP001291_4282(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 57 3e-06
AP008971_958(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 57 3e-06
A59294(A59294) skeletal myosin - nematode (Onchocerca volvulus) ... 57 3e-06
AF225904_2(AF225904|pid:none) Western X phytoplasma DNA polymera... 57 3e-06
CP001390_3560(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 44 4e-06
EF071929_1(EF071929|pid:none) Solanum lycopersicum SMC1 mRNA, pa... 56 5e-06
AY548914_2(AY548914|pid:none) Antonospora locustae 26S proteasom... 56 5e-06
(Q6RT24) RecName: Full=Centromere-associated protein E; AltName:... 56 5e-06
J00751_1(J00751|pid:none) Rat cardiac myosin heavy chain insert ... 56 5e-06
AF183909_3(AF183909|pid:none) Argopecten irradians MHC gene, alt... 56 5e-06
AF183909_2(AF183909|pid:none) Argopecten irradians MHC gene, alt... 56 5e-06
U09782_1(U09782|pid:none) Argopecten irradians myosin heavy chai... 56 5e-06
CR380954_113(CR380954|pid:none) Candida glabrata strain CBS138 c... 56 5e-06
AJ417688_1(AJ417688|pid:none) Deinococcus radiodurans smc gene. 56 5e-06
S28061(S28061) SCP1 protein - rat &X67805_1(X67805|pid:none) 56 5e-06
CR382121_10(CR382121|pid:none) Kluyveromyces lactis strain NRRL ... 56 5e-06
CP001047_350(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 56 5e-06
AF183909_1(AF183909|pid:none) Argopecten irradians MHC gene, alt... 56 5e-06
(Q03410) RecName: Full=Synaptonemal complex protein 1; ... 56 5e-06
FJ219371_1(FJ219371|pid:none) Drosophila melanogaster strain NC3... 56 6e-06
FJ219353_1(FJ219353|pid:none) Drosophila simulans strain newC SM... 56 6e-06
FJ219367_1(FJ219367|pid:none) Drosophila melanogaster strain NC3... 56 6e-06
FJ219365_1(FJ219365|pid:none) Drosophila melanogaster strain NC3... 56 6e-06
FJ219351_1(FJ219351|pid:none) Drosophila yakuba strain yak SMC1 ... 56 6e-06
FJ219368_1(FJ219368|pid:none) Drosophila melanogaster strain NC3... 56 6e-06
FJ219360_1(FJ219360|pid:none) Drosophila melanogaster strain NC3... 56 6e-06
FM992691_625(FM992691|pid:none) Candida dubliniensis CD36 chromo... 56 6e-06
BA000026_483(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c... 56 6e-06
CR382139_69(CR382139|pid:none) Debaryomyces hansenii strain CBS7... 56 6e-06
AB115699_1(AB115699|pid:none) Oryzias latipes SMC1 beta mRNA for... 56 6e-06
U59294_1(U59294|pid:none) Placopecten magellanicus myosin heavy ... 55 8e-06
AF134172_1(AF134172|pid:none) Pecten maximus myosin heavy chain ... 55 8e-06
BC166177_1(BC166177|pid:none) Xenopus tropicalis hypothetical pr... 55 8e-06
U59295_1(U59295|pid:none) Placopecten magellanicus myosin heavy ... 55 1e-05
AK126990_1(AK126990|pid:none) Homo sapiens cDNA FLJ45045 fis, cl... 55 1e-05
AM422018_797(AM422018|pid:none) Candidatus Phytoplasma australie... 55 1e-05
(P02564) RecName: Full=Myosin-7; AltName: Full=Myosin heavy chai... 55 1e-05
AJ416752_8(AJ416752|pid:none) Mycoplasma hominis uvrA gene (part... 55 1e-05
JQ0894(JQ0894)P115 protein - Mycoplasma hyorhinis 55 1e-05
BA000023_2280(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 55 1e-05
CR940347_892(CR940347|pid:none) Theileria annulata strain Ankara... 55 1e-05
(P02563) RecName: Full=Myosin-6; AltName: Full=Myosin heavy chai... 55 1e-05
CP001089_3458(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 55 1e-05
DQ131646_1(DQ131646|pid:none) Toxoplasma gondii structural maint... 54 2e-05
BC051733_1(BC051733|pid:none) Homo sapiens leucine zipper protei... 54 2e-05
AL844504_216(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 54 2e-05
AL031428_1(AL031428|pid:none) Human DNA sequence from clone RP1-... 54 2e-05
(Q86V48) RecName: Full=Leucine zipper protein 1; 54 2e-05
BC016175_1(BC016175|pid:none) Homo sapiens leucine zipper protei... 54 2e-05
(P49824) RecName: Full=Myosin-7; AltName: Full=Myosin heavy chai... 54 2e-05
A37102(A37102;S12733;A94224;B28908;A24997;A27858;I54254;) myosin... 54 2e-05
(Q91Z83) RecName: Full=Myosin-7; AltName: Full=Myosin heavy chai... 54 2e-05
AY810340_1(AY810340|pid:none) Schistosoma japonicum SJCHGC01885 ... 54 2e-05
AF229810_1(AF229810|pid:none) Felis catus slow myosin heavy chai... 54 2e-05
CR382125_227(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 54 2e-05
X52889_1(X52889|pid:none) Human gene for cardiac beta myosin hea... 54 2e-05
EU747717_1(EU747717|pid:none) Homo sapiens mutant cardiac muscle... 54 2e-05
(P13540) RecName: Full=Myosin-7; AltName: Full=Myosin heavy chai... 54 2e-05
M25139_1(M25139|pid:none) Human cardiac beta-myosin heavy chain ... 54 2e-05
AJ238393_1(AJ238393|pid:none) Homo sapiens MYH7 gene for beta-my... 54 2e-05
AK168677_1(AK168677|pid:none) Mus musculus 17 days embryo heart ... 54 2e-05
M21665_1(M21665|pid:none) Human beta-myosin heavy chain mRNA, 3'... 54 2e-05
(P11778) RecName: Full=Myosin-7; AltName: Full=Myosin heavy chai... 54 2e-05
M17712_1(M17712|pid:none) Human cardiac myosin heavy chain mRNA,... 54 2e-05
AY518538_1(AY518538|pid:none) Homo sapiens rhabdomyosarcoma anti... 54 2e-05
AF039187_1(AF039187|pid:none) Schistosoma japonicum myosin mRNA,... 54 2e-05
FN357667_8(FN357667|pid:none) Schistosoma mansoni genome sequenc... 54 3e-05
M31013_1(M31013|pid:none) Human nonmuscle myosin heavy chain (NM... 54 3e-05
FN357667_11(FN357667|pid:none) Schistosoma mansoni genome sequen... 54 3e-05
FN357667_9(FN357667|pid:none) Schistosoma mansoni genome sequenc... 54 3e-05
AE009439_771(AE009439|pid:none) Methanopyrus kandleri AV19, comp... 54 3e-05
AE017245_670(AE017245|pid:none) Mycoplasma synoviae 53, complete... 54 3e-05
CP000393_2580(CP000393|pid:none) Trichodesmium erythraeum IMS101... 54 3e-05
FN357667_10(FN357667|pid:none) Schistosoma mansoni genome sequen... 54 3e-05
CR940353_373(CR940353|pid:none) Theileria annulata strain Ankara... 53 4e-05
X07725_1(X07725|pid:none) Schistosoma mansoni partial mRNA for m... 53 4e-05
CP001078_2149(CP001078|pid:none) Clostridium botulinum E3 str. A... 53 4e-05
CU179680_439(CU179680|pid:none) Mycoplasma agalactiae PG2 chromo... 53 4e-05
CP000498_595(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 53 4e-05
(Q8MJU9) RecName: Full=Myosin-7; AltName: Full=Myosin heavy chai... 53 4e-05
(Q8IIG7) RecName: Full=Uncharacterized protein PF11_0207; &AE01... 53 4e-05
AM946015_545(AM946015|pid:none) Streptococcus uberis 0140J compl... 53 4e-05
(P35579) RecName: Full=Myosin-9; AltName: Full=Myosin heavy chai... 53 4e-05
AB004801_1(AB004801|pid:none) Gallus gallus mRNA for chick atria... 53 4e-05
D63466_1(D63466|pid:none) Gallus gallus mRNA for atrial myosin h... 53 4e-05
AM920430_68(AM920430|pid:none) Penicillium chrysogenum Wisconsin... 53 5e-05
AJ312390_1(AJ312390|pid:none) Mus musculus mRNA for nonmuscle he... 53 5e-05
CP000123_803(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 53 5e-05
BC171934_1(BC171934|pid:none) Mus musculus cDNA clone MGC:198637... 53 5e-05
(Q811D2) RecName: Full=Ankyrin repeat domain-containing protein ... 53 5e-05
AK147211_1(AK147211|pid:none) Mus musculus 15 days embryo liver ... 53 5e-05
(P13539) RecName: Full=Myosin-6; AltName: Full=Myosin heavy chai... 53 5e-05
AK173096_1(AK173096|pid:none) Mus musculus premature mRNA for mK... 53 5e-05
(Q10432) RecName: Full=Coiled-coil quantitatively-enriched prote... 52 7e-05
CP000875_2626(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 52 7e-05
BC126305_1(BC126305|pid:none) Homo sapiens CAP-GLY domain contai... 52 7e-05
(Q9BE39) RecName: Full=Myosin-7; AltName: Full=Myosin heavy chai... 52 7e-05
BC111193_1(BC111193|pid:none) Bos taurus hypothetical protein LO... 52 7e-05
X91846_1(X91846|pid:none) Sus scrofa mRNA for cardiac myosin hea... 52 7e-05
CU928178_453(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 52 7e-05
(P79293) RecName: Full=Myosin-7; AltName: Full=Myosin heavy chai... 52 7e-05
(Q2T9Z6) RecName: Full=Uncharacterized protein C14orf38 homolog; 52 7e-05
AF295804_1(AF295804|pid:none) Danio rerio rho coiled-coil associ... 52 7e-05
BC114213_1(BC114213|pid:none) Homo sapiens CAP-GLY domain contai... 52 7e-05
M76598_1(M76598|pid:none) Mouse alpha cardiac myosin heavy chain... 52 7e-05
M76600_1(M76600|pid:none) Mouse alpha cardiac myosin heavy chain... 52 7e-05
AF496667_1(AF496667|pid:none) Trypanosoma cruzi putative structu... 37 8e-05
AP006757_32(AP006757|pid:none) Oryza sativa Japonica Group genom... 52 9e-05
CP000123_804(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 52 9e-05
BC144320_1(BC144320|pid:none) Homo sapiens coiled-coil domain co... 52 9e-05
CP000123_802(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 52 9e-05
AB201172_1(AB201172|pid:none) Homo sapiens GRDN mRNA for girdin,... 52 9e-05
AB020673_1(AB020673|pid:none) Homo sapiens mRNA for KIAA0866 pro... 52 9e-05
BC110700_1(BC110700|pid:none) Mus musculus myosin, heavy polypep... 52 9e-05
D10667_1(D10667|pid:none) Homo sapiens mRNA for smooth muscle my... 52 9e-05
CU928178_458(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 52 9e-05
X69292_1(X69292|pid:none) H.sapiens mRNA for smooth muscle myosin. 52 9e-05
AY520816_1(AY520816|pid:none) Homo sapiens smooth muscle myosin ... 52 9e-05
BC132736_1(BC132736|pid:none) Homo sapiens coiled-coil domain co... 52 9e-05
AB017819_1(AB017819|pid:none) Theragra chalcogramma mRNA for myo... 52 9e-05
AF001548_1(AF001548|pid:none) Human Chromosome 16 BAC clone CIT9... 52 9e-05
BC078168_1(BC078168|pid:none) Homo sapiens coiled-coil domain co... 52 9e-05
AB058959_1(AB058959|pid:none) Patinopecten yessoensis mRNA for m... 52 9e-05
(P35749) RecName: Full=Myosin-11; AltName: Full=Myosin heavy cha... 52 9e-05
AY520817_1(AY520817|pid:none) Homo sapiens smooth muscle myosin ... 52 9e-05
AC116305_57(AC116305|pid:none) Dictyostelium discoideum chromoso... 52 9e-05
CR382132_1263(CR382132|pid:none) Yarrowia lipolytica strain CLIB... 52 9e-05
(Q3V6T2) RecName: Full=Girdin; AltName: Full=Girders of actin fi... 52 9e-05
AK161661_1(AK161661|pid:none) Mus musculus 8 days embryo whole b... 52 1e-04
BX548248_5(BX548248|pid:none) Zebrafish DNA sequence from clone ... 52 1e-04
BC071750_1(BC071750|pid:none) Homo sapiens structural maintenanc... 52 1e-04
BC017845_1(BC017845|pid:none) Homo sapiens structural maintenanc... 52 1e-04
BC032705_1(BC032705|pid:none) Homo sapiens structural maintenanc... 52 1e-04
AK019977_1(AK019977|pid:none) Mus musculus 8 days embryo whole b... 52 1e-04
AF092563_1(AF092563|pid:none) Homo sapiens chromosome-associated... 52 1e-04
AL732619_3(AL732619|pid:none) Mouse DNA sequence from clone RP23... 52 1e-04
BC152521_1(BC152521|pid:none) Danio rerio structural maintenance... 52 1e-04
AL732619_2(AL732619|pid:none) Mouse DNA sequence from clone RP23... 52 1e-04
BC107891_1(BC107891|pid:none) Homo sapiens structural maintenanc... 52 1e-04
(Q90988) RecName: Full=Structural maintenance of chromosomes pro... 52 1e-04
AK292599_1(AK292599|pid:none) Homo sapiens cDNA FLJ78259 complet... 52 1e-04
BC144163_1(BC144163|pid:none) Homo sapiens structural maintenanc... 52 1e-04
(O95347) RecName: Full=Structural maintenance of chromosomes pro... 52 1e-04
AK220172_1(AK220172|pid:none) Mus musculus mRNA for mKIAA4046 pr... 52 1e-04
DQ286057_1(DQ286057|pid:none) Hydra vulgaris myosin heavy chain ... 52 1e-04
BC167944_1(BC167944|pid:none) Xenopus tropicalis cDNA clone IMAG... 52 1e-04
AY232598_1(AY232598|pid:none) Homarus americanus slow muscle myo... 52 1e-04
AB209996_1(AB209996|pid:none) Homo sapiens mRNA for CENPE varian... 52 1e-04
AM180088_861(AM180088|pid:none) Haloquadratum walsbyi DSM 16790 ... 52 1e-04
(P14105) RecName: Full=Myosin-9; AltName: Full=Myosin heavy chai... 52 1e-04
AE014134_2932(AE014134|pid:none) Drosophila melanogaster chromos... 52 1e-04
L03534_1(L03534|pid:none) Entamoeba histolytica myosin heavy cha... 52 1e-04
AE014134_2927(AE014134|pid:none) Drosophila melanogaster chromos... 52 1e-04
AP008218_1495(AP008218|pid:none) Oryza sativa (japonica cultivar... 52 1e-04
DQ411847_1(DQ411847|pid:none) Physarum polycephalum rad50 mRNA, ... 52 1e-04
S28261(S28261) centromere protein E - human &Z15005_1(Z15005|pi... 52 1e-04
AE014134_2926(AE014134|pid:none) Drosophila melanogaster chromos... 52 1e-04
AF335500_1(AF335500|pid:none) Physarum polycephalum major plasmo... 52 1e-04
CP001047_264(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 52 1e-04
(Q5ZMV2) RecName: Full=Spindle assembly abnormal protein 6 homol... 52 1e-04
AF041382_1(AF041382|pid:none) Drosophila melanogaster microtubul... 52 1e-04
AE014134_2928(AE014134|pid:none) Drosophila melanogaster chromos... 52 1e-04
BT023498_1(BT023498|pid:none) Drosophila melanogaster LD32453 fu... 51 1e-04
M12995_1(M12995|pid:none) Hamster cardiac alpha-myosin heavy cha... 51 1e-04
BC163537_1(BC163537|pid:none) Danio rerio myosin, heavy polypept... 51 1e-04
CP001279_496(CP001279|pid:none) Nautilia profundicola AmH, compl... 51 1e-04
(P93203) RecName: Full=MAR-binding filament-like protein 1; &T0... 51 1e-04
AK302725_1(AK302725|pid:none) Homo sapiens cDNA FLJ60377 complet... 51 1e-04
AE014186_259(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 51 1e-04
AE014187_665(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 51 1e-04
CP000382_2175(CP000382|pid:none) Clostridium novyi NT, complete ... 51 1e-04
D86970_1(D86970|pid:none) Homo sapiens mRNA for KIAA0216 gene, c... 51 1e-04
AK302505_1(AK302505|pid:none) Homo sapiens cDNA FLJ60372 complet... 51 1e-04
M25142_1(M25142|pid:none) Human cardiac alpha-myosin heavy chain... 51 1e-04
AB177860_1(AB177860|pid:none) Homo sapiens mRNA for KIAA0216 spl... 51 1e-04
AF305694_1(AF305694|pid:none) Kaposi's sarcoma-associated herpes... 51 1e-04
AB177858_1(AB177858|pid:none) Homo sapiens mRNA for KIAA0216 spl... 51 1e-04
(Q076A3) RecName: Full=Myosin-13; AltName: Full=Myosin heavy cha... 51 1e-04
BC150415_1(BC150415|pid:none) Danio rerio similar to myosin heav... 51 1e-04
CP001047_207(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 51 1e-04
BX510649_8(BX510649|pid:none) Zebrafish DNA sequence from clone ... 51 1e-04
CP000061_184(CP000061|pid:none) Aster yellows witches'-broom phy... 51 1e-04
(P21249) RecName: Full=Major antigen; AltName: Full=Myosin-like ... 51 2e-04
CP000923_199(CP000923|pid:none) Thermoanaerobacter sp. X514, com... 51 2e-04
EU841912_1(EU841912|pid:none) Xenopus laevis smooth muscle myosi... 51 2e-04
AY040821_1(AY040821|pid:none) Loligo pealei non-muscle myosin II... 51 2e-04
CP001251_887(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, ... 51 2e-04
A37049(A37049)myosin alpha heavy chain, cardiac - hamadryas babo... 51 2e-04
EU841911_1(EU841911|pid:none) Xenopus laevis smooth muscle myosi... 51 2e-04
(Q15643) RecName: Full=Thyroid receptor-interacting protein 11; ... 51 2e-04
DQ022376_1(DQ022376|pid:none) Danio rerio smooth muscle myosin h... 51 2e-04
BC162152_1(BC162152|pid:none) Danio rerio myosin, heavy polypept... 51 2e-04
BT085339_1(BT085339|pid:none) Zea mays full-length cDNA clone ZM... 51 2e-04
CR933614_1(CR933614|pid:none) Homo sapiens mRNA; cDNA DKFZp686L0... 51 2e-04
BX641024_1(BX641024|pid:none) Homo sapiens mRNA; cDNA DKFZp686C0... 51 2e-04
CP000885_3166(CP000885|pid:none) Clostridium phytofermentans ISD... 51 2e-04
AF541925_1(AF541925|pid:none) Rattus norvegicus ERC2 mRNA, compl... 51 2e-04
CP000924_1961(CP000924|pid:none) Thermoanaerobacter pseudethanol... 51 2e-04
(Q62812) RecName: Full=Myosin-9; AltName: Full=Myosin heavy chai... 51 2e-04
AE013599_2069(AE013599|pid:none) Drosophila melanogaster chromos... 50 3e-04
CP000325_1690(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 50 3e-04
CP000679_141(CP000679|pid:none) Caldicellulosiruptor saccharolyt... 50 3e-04

>(Q54LV0) RecName: Full=Structural maintenance of chromosomes protein
4;
Length = 1415

Score = 468 bits (1205), Expect(2) = 0.0
Identities = 244/252 (96%), Positives = 244/252 (96%)
Frame = +1

Query: 682 NGATQNLDDAIKALEDAKTISSTRKNNITKSKKELESVKAIIVDLEKRLASGKVTEENLY 861
NGATQNLDDAIKALEDAKTISSTRKNNITKSKKELESVKAIIVDLEKRLASGKVTEENLY
Sbjct: 596 NGATQNLDDAIKALEDAKTISSTRKNNITKSKKELESVKAIIVDLEKRLASGKVTEENLY 655

Query: 862 RNTMDAKRQLEQIKTNLSENSSRNTILDRLLKIKESGQISGIHGRLGDLGAIDQKYDVAI 1041
RNTMDAKRQLEQIKTNLSENSSRNTILDRLLKIKESGQISGIHGRLGDLGAIDQKYDVAI
Sbjct: 656 RNTMDAKRQLEQIKTNLSENSSRNTILDRLLKIKESGQISGIHGRLGDLGAIDQKYDVAI 715

Query: 1042 STAAFSQMDNIIVXXXXXXXXCVELLRKENLGRATFMILENLEYQRQNLGPVQTPNNTPR 1221
STAAFSQMDNIIV CVELLRKENLGRATFMILENLEYQRQNLGPVQTPNNTPR
Sbjct: 716 STAAFSQMDNIIVETTAAAEACVELLRKENLGRATFMILENLEYQRQNLGPVQTPNNTPR 775

Query: 1222 LFDLIKMKDEKKYATAFFTAVGHTLVADTLDEATKIAYGAKRHRVVTLDGSLIDTSGAMS 1401
LFDLIKMKDEKKYATAFFTAVGHTLVADTLDEATKIAYGAKRHRVVTLDGSLIDTSGAMS
Sbjct: 776 LFDLIKMKDEKKYATAFFTAVGHTLVADTLDEATKIAYGAKRHRVVTLDGSLIDTSGAMS 835

Query: 1402 GGGLKPRVGAMN 1437
GGGLKPRVGAMN
Sbjct: 836 GGGLKPRVGAMN 847

Score = 354 bits (908), Expect(2) = 0.0
Identities = 190/202 (94%), Positives = 194/202 (96%), Gaps = 1/202 (0%)
Frame = +2

Query: 1523 RQCRDELVEIENQIQQAQNRRSELELELPKMDMDIKAAITKCEELTKVIPQLKNKAKLST 1702
RQCRDELVEIENQIQQAQNRRSELELELPKMDMDIKAAITKCEELTKVIPQLKNKAKLST
Sbjct: 876 RQCRDELVEIENQIQQAQNRRSELELELPKMDMDIKAAITKCEELTKVIPQLKNKAKLST 935

Query: 1703 EKKEQIDSIKESLIVDQKSLDKVQEKVNKLESEVQEIQNSILNVGGPQLKMQKNKVESLQ 1882
EKKEQIDSIKESLIVDQKSLDKVQEKVNKLESEVQEIQNSILNVGGPQLKMQKNKVESLQ
Sbjct: 936 EKKEQIDSIKESLIVDQKSLDKVQEKVNKLESEVQEIQNSILNVGGPQLKMQKNKVESLQ 995

Query: 1883 SRIDSNQTNTTKANVQIKSLAKSMEKSIKILNENTKEKDENEAALAEILEKYKSLEKENL 2062
SRIDSNQTNTTKANVQIKSLAKSMEKSIKILNENTKEKDENEAALAEILEKYKSLEKENL
Sbjct: 996 SRIDSNQTNTTKANVQIKSLAKSMEKSIKILNENTKEKDENEAALAEILEKYKSLEKENL 1055

Query: 2063 KATEARK-LSRTTSXRKXETKE 2125
KATEA + +S ++ ETKE
Sbjct: 1056 KATEAMEAVSEQLREKEEETKE 1077

Score = 125 bits (315), Expect = 5e-27
Identities = 72/127 (56%), Positives = 72/127 (56%)
Frame = +3

Query: 279 DIKKASQQSQTQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNXXXXXXXXXX 458
DIKKASQQSQTQK KN
Sbjct: 81 DIKKASQQSQTQKNTPPPIQTSQSSQSSQSSQSSQQQQPKNISQTQQPKNTPPLQSSQTS 140

Query: 459 XXXXXXXXXXNNGIEKRLMITKMVMENFKSYAGAQEVGPFHKCFSSVVGPNGSGKSNVID 638
NNGIEKRLMITKMVMENFKSYAGAQEVGPFHKCFSSVVGPNGSGKSNVID
Sbjct: 141 QTSQKTPVSSNNGIEKRLMITKMVMENFKSYAGAQEVGPFHKCFSSVVGPNGSGKSNVID 200

Query: 639 AMLFVFG 659
AMLFVFG
Sbjct: 201 AMLFVFG 207

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,586,866,090
Number of extensions: 45656879
Number of successful extensions: 189134
Number of sequences better than 10.0: 4150
Number of HSP's gapped: 186434
Number of HSP's successfully gapped: 6266
Length of query: 708
Length of database: 1,040,966,779
Length adjustment: 136
Effective length of query: 572
Effective length of database: 605,184,019
Effective search space: 346165258868
Effective search space used: 346165258868
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.37 gvh: 0.10 alm: 0.43 top: 0.53 tms: 0.00 mit: 0.20 mip: 0.00
nuc: 0.02 erl: 0.00 erm: 0.40 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.12 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

52.0 %: nuclear
32.0 %: cytoplasmic
8.0 %: cytoskeletal
8.0 %: mitochondrial

>> prediction for Contig-U11313-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 5
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 2
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0