| Contig-U11295-1 |
| Contig ID |
Contig-U11295-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1175 |
| Chromosome number (1..6, M) |
4 |
| Chromosome length |
5430582 |
| Start point |
120322 |
| End point |
121477 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
48 |
| Number of EST |
66 |
| Link to clone list |
U11295 |
| List of clone(s) |
est1=AHE418F,1,161
est2=AHQ184F,10,161
est3=SHA508F,22,161
est4=VHG514F,25,160
est5=SHE682F,29,161
est6=SHK425F,32,161
est7=AHH840F,35,188
est8=SHB496F,36,161
est9=AHJ236F,38,161
est10=AHR333F,38,161
est11=CHH185F,38,160
est12=SHF633F,41,188
est13=AHC351F,45,161
est14=AHG805F,45,161
est15=AHH309F,45,161
est16=AHO317F,45,161
est17=AHQ639F,45,161
est18=CHJ581F,45,160
est19=SHJ230F,48,188
est20=SHC490F,49,161
est21=VHQ206F,50,160
est22=AHE502F,52,161
est23=AHK822F,52,172
est24=AHQ701F,52,161
est25=CHS412F,52,160
est26=AHM862F,53,161
est27=CHI263F,54,160
est28=CHK653F,54,160
est29=SHI733F,60,161
est30=AHQ184Z,189,504
est31=AHJ236Z,209,800
est32=AHO117Z,260,807
est33=CHH185Z,263,704
est34=AHQ701Z,320,820
est35=CHS412Z,328,815
est36=SHB586Z,359,939
est37=AHQ754Z,366,985
est38=SHC737Z,367,962
est39=AHR333Z,430,800
est40=AHH309Z,452,1008
est41=CHI263Z,453,1016
est42=CHQ638Z,453,1035
est43=AHQ639Z,458,1007
est44=AHH595Z,490,1075
est45=AHE418Z,491,976
est46=AHH840Z,492,1007
est47=SHC490Z,492,1010
est48=AHC288Z,514,1013
est49=SHG241Z,518,1131
est50=CFJ551Z,523,1185
est51=SHF633Z,525,999
est52=AHK822Z,529,1005
est53=AHF707Z,534,1111
est54=CHR396Z,542,1056
est55=SHE387Z,543,1073
est56=CHN849Z,552,1017
est57=CHH359Z,567,1074
est58=SHB496Z,595,1010
est59=SHG381Z,599,1141
est60=AHR279Z,604,1142
est61=CHK653Z,610,1015
est62=CHJ581Z,611,1005
est63=VHG514Z,611,997
est64=AHG789Z,653,817
est65=CHJ671Z,674,1096
est66=VHG484Z,689,1174
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.23 |
| Homology vs DNA |
Query= Contig-U11295-1 (Contig-U11295-1Q) /CSM_Contig/Contig-U11295-1Q.Seq.d
(1185 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ353203) Dictyostelium discoideum cDNA clone:dda49g10, 3' ... 797 0.0 2
(BJ385566) Dictyostelium discoideum cDNA clone:ddc55k10, 3' ... 753 0.0 2
(BJ380591) Dictyostelium discoideum cDNA clone:ddc38m16, 3' ... 753 0.0 2
(BJ351909) Dictyostelium discoideum cDNA clone:dda45b03, 3' ... 753 0.0 2
(BJ356020) Dictyostelium discoideum cDNA clone:dda59a05, 3' ... 704 0.0 2
(BJ404704) Dictyostelium discoideum cDNA clone:dds29j09, 3' ... 638 0.0 2
(BJ404244) Dictyostelium discoideum cDNA clone:dds27k21, 3' ... 613 0.0 2
(BJ357768) Dictyostelium discoideum cDNA clone:dda64l13, 3' ... 504 0.0 3
(BJ357702) Dictyostelium discoideum cDNA clone:dda64m10, 3' ... 753 0.0 2
(BJ375921) Dictyostelium discoideum cDNA clone:ddc20e13, 3' ... 753 0.0 4
(BJ352489) Dictyostelium discoideum cDNA clone:dda46m23, 3' ... 753 0.0 2
(BJ352349) Dictyostelium discoideum cDNA clone:dda46p10, 3' ... 753 0.0 2
(BJ404519) Dictyostelium discoideum cDNA clone:dds28d24, 3' ... 704 0.0 3
(BJ357578) Dictyostelium discoideum cDNA clone:dda64b01, 3' ... 579 0.0 2
(BJ349270) Dictyostelium discoideum cDNA clone:dda35o22, 3' ... 753 0.0 2
(BJ351139) Dictyostelium discoideum cDNA clone:dda42n01, 3' ... 753 0.0 3
(BJ406723) Dictyostelium discoideum cDNA clone:dds36a12, 3' ... 504 0.0 4
(BJ350190) Dictyostelium discoideum cDNA clone:dda39d06, 3' ... 696 0.0 2
(BJ386394) Dictyostelium discoideum cDNA clone:ddc58h04, 3' ... 557 0.0 3
(BJ406432) Dictyostelium discoideum cDNA clone:dds35a10, 3' ... 745 0.0 2
(BJ353992) Dictyostelium discoideum cDNA clone:dda52l06, 3' ... 753 0.0 3
(BJ405772) Dictyostelium discoideum cDNA clone:dds32n21, 3' ... 753 0.0 2
(BJ386040) Dictyostelium discoideum cDNA clone:ddc56p23, 3' ... 741 0.0 2
(BJ384447) Dictyostelium discoideum cDNA clone:ddc49b14, 3' ... 753 0.0 2
(BJ379959) Dictyostelium discoideum cDNA clone:ddc36f15, 3' ... 753 0.0 2
(BJ380056) Dictyostelium discoideum cDNA clone:ddc36i21, 3' ... 686 0.0 2
(BJ406880) Dictyostelium discoideum cDNA clone:dds36b21, 3' ... 728 0.0 4
(BJ358154) Dictyostelium discoideum cDNA clone:dda65m20, 3' ... 745 0.0 2
(BJ409370) Dictyostelium discoideum cDNA clone:dds41b09, 3' ... 648 0.0 3
(BJ382010) Dictyostelium discoideum cDNA clone:ddc43i14, 3' ... 753 0.0 1
(BJ381503) Dictyostelium discoideum cDNA clone:ddc41a21, 3' ... 753 0.0 1
(BJ403996) Dictyostelium discoideum cDNA clone:dds26p24, 3' ... 741 0.0 2
(BJ440581) Dictyostelium discoideum cDNA clone:ddv44k03, 3' ... 741 0.0 1
(BJ357943) Dictyostelium discoideum cDNA clone:dda65b09, 3' ... 367 0.0 2
(BJ409516) Dictyostelium discoideum cDNA clone:dds42k08, 3' ... 670 0.0 1
(BJ440486) Dictyostelium discoideum cDNA clone:ddv43h22, 3' ... 331 0.0 3
(BJ381486) Dictyostelium discoideum cDNA clone:ddc41m18, 3' ... 648 0.0 2
(BJ357524) Dictyostelium discoideum cDNA clone:dda63g21, 3' ... 611 e-170 1
(BJ351832) Dictyostelium discoideum cDNA clone:dda44b23, 3' ... 325 2e-84 1
(BJ394465) Dictyostelium discoideum cDNA clone:dds35a10, 5' ... 119 1e-32 2
(BJ339014) Dictyostelium discoideum cDNA clone:dda63g21, 5' ... 119 1e-32 2
(BJ421879) Dictyostelium discoideum cDNA clone:ddv44k03, 5' ... 119 1e-32 2
(BJ394091) Dictyostelium discoideum cDNA clone:dds33c22, 5' ... 119 1e-32 2
(BJ365861) Dictyostelium discoideum cDNA clone:ddc36i21, 5' ... 119 1e-32 2
(BJ339412) Dictyostelium discoideum cDNA clone:dda65b09, 5' ... 119 1e-32 2
(BJ335206) Dictyostelium discoideum cDNA clone:dda49g10, 5' ... 119 1e-32 2
(BJ367195) Dictyostelium discoideum cDNA clone:ddc41a21, 5' ... 119 1e-32 2
(BJ339177) Dictyostelium discoideum cDNA clone:dda64m10, 5' ... 119 1e-32 2
(BJ337796) Dictyostelium discoideum cDNA clone:dda59b05, 5' ... 119 1e-32 2
(BJ334067) Dictyostelium discoideum cDNA clone:dda45b03, 5' ... 119 1e-32 2
(BJ333811) Dictyostelium discoideum cDNA clone:dda44j02, 5' ... 119 1e-32 2
(BJ331479) Dictyostelium discoideum cDNA clone:dda35f13, 5' ... 119 1e-32 2
(BJ391784) Dictyostelium discoideum cDNA clone:dds25o01, 5' ... 119 2e-31 2
(BJ332417) Dictyostelium discoideum cDNA clone:dda39d06, 5' ... 113 8e-31 2
(BJ396289) Dictyostelium discoideum cDNA clone:dds42k08, 5' ... 113 8e-31 2
(BJ392744) Dictyostelium discoideum cDNA clone:dds28d24, 5' ... 111 3e-30 2
(BJ334450) Dictyostelium discoideum cDNA clone:dda46p10, 5' ... 109 1e-29 2
(BJ396866) Dictyostelium discoideum cDNA clone:dds44b08, 5' ... 109 1e-29 2
(BJ335950) Dictyostelium discoideum cDNA clone:dda52l06, 5' ... 105 2e-28 2
(BJ371456) Dictyostelium discoideum cDNA clone:ddc58h04, 5' ... 105 2e-28 2
(BJ339060) Dictyostelium discoideum cDNA clone:dda64b01, 5' ... 105 2e-28 2
(BJ332835) Dictyostelium discoideum cDNA clone:dda40c01, 5' ... 105 2e-28 2
(BJ427651) Dictyostelium discoideum cDNA clone:ddv63k02, 5' ... 103 7e-28 2
(BJ367681) Dictyostelium discoideum cDNA clone:ddc43i14, 5' ... 101 3e-27 2
(BJ366353) Dictyostelium discoideum cDNA clone:ddc38m16, 5' ... 101 3e-27 2
(BJ396065) Dictyostelium discoideum cDNA clone:dds41b09, 5' ... 90 1e-23 2
(BJ392254) Dictyostelium discoideum cDNA clone:dds26p24, 5' ... 82 4e-22 3
(AR549635) Sequence 4766 from patent US 6747137. 58 1e-16 5
(BJ337213) Dictyostelium discoideum cDNA clone:dda56l16, 5' ... 54 3e-11 3
(DJ025875) Genome-wide DNA marker of Saccharomyces cerevisiae. 50 1e-05 2
(Z48618) S.cerevisiae genes for RAD54, ACE1(CUP2), PMR1, RCK... 50 1e-05 2
(Z72685) S.cerevisiae chromosome VII reading frame ORF YGL163c. 50 1e-05 2
(M63232) Saccharomyces cerevisiae recombination and repair p... 50 1e-05 2
(DQ331995) Synthetic construct Saccharomyces cerevisiae clon... 50 1e-05 2
(DJ209321) Method for identification of useful proteins deri... 50 1e-05 2
(CK805260) AGENCOURT_19147903 NICHD_XGC_Te2 Xenopus laevis c... 34 2e-05 3
(CX461692) JGI_XZG24900.fwd NIH_XGC_tropGas7 Xenopus (Silura... 34 2e-05 3
(AZ689825) ENTIW13TF Entamoeba histolytica Sheared DNA Entam... 40 0.003 2
(FE368478) CBNO5532.rev CBNO_Daphnia_pulex_Chosen_One_Librar... 44 0.003 2
(FE377603) CBNS2761.rev CBNS_Daphnia_pulex_Chosen_One_Librar... 44 0.003 2
(FE377604) CBNS2761.fwd CBNS_Daphnia_pulex_Chosen_One_Librar... 44 0.003 2
(EH642842) EST13950 LK04 Laupala kohalensis cDNA clone 10610... 54 0.012 1
(FK190307) XABT204867.b1 Gateway compatible cien cDNA librar... 50 0.045 2
(BW325572) Ciona intestinalis cDNA, clone:cidg822e02, 5'end,... 50 0.046 2
(FK055229) XABT120999.b1 Gateway compatible cien cDNA librar... 50 0.048 2
(DX803352) 3625667 VV10 Chlamydomonas reinhardtii genomic cl... 52 0.049 1
(CR940347) Theileria annulata genomic DNA chromosome 1 part 1. 34 0.100 2
(AJ921126) Theileria annulata EST, clone TAC5c03_p1ka. 40 0.15 2
(BJ366181) Dictyostelium discoideum cDNA clone:ddc38f03, 5' ... 44 0.15 2
(BJ392227) Dictyostelium discoideum cDNA clone:dds26j20, 5' ... 44 0.16 2
(FK115702) XABT159233.b1 Gateway compatible cien cDNA librar... 48 0.16 2
(BH159598) ENTSL86TF Entamoeba histolytica Sheared DNA Entam... 38 0.18 2
(CR382121) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 50 0.19 1
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 50 0.19 1
(AC135652) Rattus norvegicus clone CH230-179N10, WORKING DRA... 50 0.19 1
(AC134642) Rattus norvegicus clone CH230-212M15, WORKING DRA... 50 0.19 1
(AC123290) Rattus norvegicus clone CH230-375K15, WORKING DRA... 50 0.19 1
(AC120624) Rattus norvegicus clone CH230-25E7, WORKING DRAFT... 50 0.19 1
(AC114436) Rattus norvegicus clone CH230-174I1, *** SEQUENCI... 50 0.19 1
(AC097996) Rattus norvegicus clone CH230-58J16, *** SEQUENCI... 50 0.19 1
>(BJ353203) Dictyostelium discoideum cDNA clone:dda49g10, 3' end,
single read.
Length = 589
Score = 797 bits (402), Expect(2) = 0.0
Identities = 405/406 (99%)
Strand = Plus / Minus
Query: 219 ttaaagttattcccaaaggaatggaatccaaaagttttccaaccgcaatactctagtaag 278
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 589 ttaaagttattcccaaaggaatggaatccaaaagttttccaaccacaatactctagtaag 530
Query: 279 ttattgtttgtagatcgtttacttgcaaatattagaaactcaaaatctggtgataaaact 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ttattgtttgtagatcgtttacttgcaaatattagaaactcaaaatctggtgataaaact 470
Query: 339 gtaatcatttcaaattatactcaaaccttggaagtattggcaacaatgtgtaaaactcgt 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gtaatcatttcaaattatactcaaaccttggaagtattggcaacaatgtgtaaaactcgt 410
Query: 399 ggttacgcatactttcaattggatggttcgacagccaatgctaaacgtcaacaattggtc 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ggttacgcatactttcaattggatggttcgacagccaatgctaaacgtcaacaattggtc 350
Query: 459 aatctttataatgacccagccagaccagagtttgtatttcttcttagttcaaaagcaggt 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aatctttataatgacccagccagaccagagtttgtatttcttcttagttcaaaagcaggt 290
Query: 519 ggtgttggtttgaatcttattggtggtaatcatttggttttattcgatgcagattggaat 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ggtgttggtttgaatcttattggtggtaatcatttggttttattcgatgcagattggaat 230
Query: 579 ccagcaaatgatgcccaatctatggctcgtgtttggagagaaggtc 624
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ccagcaaatgatgcccaatctatggctcgtgtttggagagaaggtc 184
Score = 341 bits (172), Expect(2) = 0.0
Identities = 174/175 (99%)
Strand = Plus / Minus
Query: 634 tcgtatccatttatcgtacctttacaactggtaccattgaagagaaaatctttcaaagac 693
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 175 tcgtatccatttatcgtacctttacanctggtaccattgaagagaaaatctttcaaagac 116
Query: 694 aattaaccaaacaagcactttcaacaagtatcactgaaggggattctgataattcaccat 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 aattaaccaaacaagcactttcaacaagtatcactgaaggggattctgataattcaccat 56
Query: 754 cttttgactcaaaggatttaaaagatatttttacacttcgtgaagatacactttg 808
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 cttttgactcaaaggatttaaaagatatttttacacttcgtgaagatacactttg 1
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,225,056,881
Number of extensions: 77478585
Number of successful extensions: 6416223
Number of sequences better than 10.0: 330
Length of query: 1185
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1161
Effective length of database: 97,308,875,965
Effective search space: 112975604995365
Effective search space used: 112975604995365
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.29 |
| Homology vs Protein |
Query= Contig-U11295-1 (Contig-U11295-1Q) /CSM_Contig/Contig-U11295-1Q.Seq.d
(1185 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC067986_1(BC067986|pid:none) Xenopus tropicalis RAD54-like (S. ... 241 3e-62
(O12944) RecName: Full=DNA repair and recombination protein RAD5... 239 2e-61
BC046050_1(BC046050|pid:none) Danio rerio RAD54-like (S. cerevis... 239 2e-61
AM494961_78(AM494961|pid:none) Leishmania braziliensis chromosom... 237 7e-61
X97796_1(X97796|pid:none) M.musculus mRNA homologous to S. cerev... 234 4e-60
BC021643_1(BC021643|pid:none) Mus musculus RAD54 like (S. cerevi... 234 4e-60
(P70270) RecName: Full=DNA repair and recombination protein RAD5... 234 4e-60
AK088876_1(AK088876|pid:none) Mus musculus 2 days neonate thymus... 234 6e-60
X97795_1(X97795|pid:none) H.sapiens mRNA homologous to S. cerevi... 231 3e-59
AK297204_1(AK297204|pid:none) Homo sapiens cDNA FLJ58371 complet... 231 3e-59
AB168179_1(AB168179|pid:none) Macaca fascicularis testis cDNA cl... 231 3e-59
(Q92698) RecName: Full=DNA repair and recombination protein RAD5... 231 3e-59
AB169145_1(AB169145|pid:none) Macaca fascicularis testis cDNA, c... 229 2e-58
(Q9Y620) RecName: Full=DNA repair and recombination protein RAD5... 228 4e-58
CP001575_488(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 223 1e-56
AF069780_1(AF069780|pid:none) Drosophila melanogaster RAD54 DNA ... 222 2e-56
AY069599_1(AY069599|pid:none) Drosophila melanogaster LD35220 fu... 222 2e-56
BC072215_1(BC072215|pid:none) Xenopus laevis hypothetical protei... 221 4e-56
BC166345_1(BC166345|pid:none) Xenopus tropicalis RAD54 homolog B... 219 1e-55
AB091330_1(AB091330|pid:none) Magnaporthe grisea rhm54 gene for ... 218 3e-55
CR954208_386(CR954208|pid:none) Ostreococcus tauri strain OTTH05... 218 4e-55
BX088700_99(BX088700|pid:none) DNA centromeric region sequence f... 217 7e-55
AM920437_192(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 216 1e-54
AP007155_353(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 215 2e-54
CR382128_285(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 215 3e-54
AB032901_1(AB032901|pid:none) Neurospora crassa mus-25 gene for ... 214 6e-54
AB250666_1(AB250666|pid:none) Arabidopsis thaliana AtRAD54 mRNA ... 213 8e-54
CU928178_201(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 213 1e-53
FM992688_1248(FM992688|pid:none) Candida dubliniensis CD36 chrom... 213 1e-53
AE017344_279(AE017344|pid:none) Cryptococcus neoformans var. neo... 210 7e-53
CR382121_129(CR382121|pid:none) Kluyveromyces lactis strain NRRL... 206 1e-51
(P41410) RecName: Full=DNA repair protein rhp54; EC=3.6... 203 8e-51
S41886(S41886;T37703;S41444) DNA repair protein - fission yeast ... 203 8e-51
AP000419_13(AP000419|pid:none) Arabidopsis thaliana genomic DNA,... 202 2e-50
FN392321_223(FN392321|pid:none) Pichia pastoris GS115 chromosome... 197 5e-49
AP007151_1036(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 186 1e-45
AM910983_149(AM910983|pid:none) Plasmodium knowlesi strain H chr... 186 2e-45
AE016818_49(AE016818|pid:none) Ashbya gossypii (= Eremothecium g... 183 9e-45
AM269987_12(AM269987|pid:none) Aspergillus niger contig An01c040... 183 1e-44
AL844507_32(AL844507|pid:none) Plasmodium falciparum 3D7 chromos... 178 3e-43
CR382126_514(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 176 2e-42
T31515(T31515)hypothetical protein Y116A8C.13 - Caenorhabditis e... 175 3e-42
AL117204_10(AL117204|pid:none) Caenorhabditis elegans YAC Y116A8... 175 3e-42
AE016820_159(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 174 4e-42
FN392319_1509(FN392319|pid:none) Pichia pastoris GS115 chromosom... 171 4e-41
CU928167_206(CU928167|pid:none) Kluyveromyces thermotolerans str... 171 6e-41
FJ219240_1(FJ219240|pid:none) Drosophila melanogaster strain MW4... 171 6e-41
FJ219212_1(FJ219212|pid:none) Drosophila yakuba strain yak okra ... 170 1e-40
CR380959_82(CR380959|pid:none) Candida glabrata strain CBS138 ch... 170 1e-40
CR382131_1006(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 169 1e-40
FJ219226_1(FJ219226|pid:none) Drosophila melanogaster strain NC3... 169 2e-40
(P38086) RecName: Full=DNA repair and recombination protein RDH5... 161 5e-38
S45466(S45466;S45936;S59706;S39223) probable DNA repair protein ... 161 5e-38
CR954209_353(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 159 1e-37
CP000589_317(CP000589|pid:none) Ostreococcus lucimarinus CCE9901... 159 2e-37
CP001323_315(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 158 3e-37
AM460282_5(AM460282|pid:none) Vitis vinifera contig VV78X085811.... 157 5e-37
FN357342_14(FN357342|pid:none) Schistosoma mansoni genome sequen... 146 1e-33
(Q03468) RecName: Full=DNA excision repair protein ERCC-6; ... 141 4e-32
AK303022_1(AK303022|pid:none) Homo sapiens cDNA FLJ57242 complet... 141 4e-32
CR954202_487(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 139 1e-31
BC167234_1(BC167234|pid:none) Synthetic construct Mus musculus c... 139 2e-31
CP000592_288(CP000592|pid:none) Ostreococcus lucimarinus CCE9901... 138 3e-31
CR762493_3(CR762493|pid:none) Zebrafish DNA sequence from clone ... 137 6e-31
CP001326_138(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 137 7e-31
AC012647_4(AC012647|pid:none) Trypanosoma brucei chromosome 2 cl... 135 3e-30
CU633900_1017(CU633900|pid:none) Podospora anserina genomic DNA ... 134 6e-30
AP005002_19(AP005002|pid:none) Oryza sativa Japonica Group genom... 133 1e-29
AP007171_293(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 131 4e-29
AP003727_27(AP003727|pid:none) Oryza sativa Japonica Group genom... 131 5e-29
(Q9UR24) RecName: Full=DNA repair protein rhp26; AltName: Full=R... 130 9e-29
AB210714_1(AB210714|pid:none) Ciona intestinalis Ci-SWI/SNF mRNA... 130 1e-28
S62418(S62418)hypothetical protein SPAC22F3.03c - fission yeast ... 129 2e-28
(Q09772) RecName: Full=Meiotic recombination protein rdh54; ... 129 2e-28
T38188(T38188)probable DNA repair helicase - fission yeast (Sch... 129 2e-28
AE016819_194(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 129 3e-28
CR382125_983(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 128 3e-28
AK221299_1(AK221299|pid:none) Arabidopsis thaliana mRNA for pseu... 128 4e-28
BC016071_1(BC016071|pid:none) Mus musculus SWI/SNF related, matr... 127 6e-28
(Q6PGB8) RecName: Full=Probable global transcription activator S... 127 6e-28
AF325920_1(AF325920|pid:none) Mus musculus DNA-dependent ATPase ... 127 6e-28
BC091795_1(BC091795|pid:none) Danio rerio hypothetical protein L... 127 1e-27
AL022577_2(AL022577|pid:none) Human DNA sequence from clone RP3-... 127 1e-27
CR857590_1(CR857590|pid:none) Pongo abelii mRNA; cDNA DKFZp459M1... 127 1e-27
CR380955_66(CR380955|pid:none) Candida glabrata strain CBS138 ch... 126 1e-27
BC153225_1(BC153225|pid:none) Bos taurus SWI/SNF related, matrix... 126 1e-27
CR954201_555(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 126 2e-27
CR382126_1059(CR382126|pid:none) Kluyveromyces lactis strain NRR... 126 2e-27
CP001326_123(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 126 2e-27
AK039811_1(AK039811|pid:none) Mus musculus 0 day neonate thymus ... 125 2e-27
AK316444_1(AK316444|pid:none) Homo sapiens cDNA, FLJ79343 comple... 125 2e-27
(Q91ZW3) RecName: Full=SWI/SNF-related matrix-associated actin-d... 125 2e-27
BX470255_2(BX470255|pid:none) Zebrafish DNA sequence from clone ... 125 3e-27
BC133097_1(BC133097|pid:none) Danio rerio SWI/SNF related, matri... 125 3e-27
AF325921_1(AF325921|pid:none) Mus musculus DNA-dependent ATPase ... 124 5e-27
CP000496_810(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 124 6e-27
(Q08773) RecName: Full=ISWI chromatin-remodeling complex ATPase ... 124 6e-27
(P40352) RecName: Full=DNA repair and recombination protein RAD2... 124 6e-27
(P38144) RecName: Full=ISWI chromatin-remodeling complex ATPase ... 123 1e-26
S46122(S46122)SNF2 protein homolog YBR245c - yeast (Saccharomyce... 123 1e-26
FM992695_700(FM992695|pid:none) Candida dubliniensis CD36 chromo... 123 1e-26
AE016818_282(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 123 1e-26
AK292850_1(AK292850|pid:none) Homo sapiens cDNA FLJ76689 partial... 123 1e-26
AF006514_1(AF006514|pid:none) Homo sapiens CHD2 mRNA, complete c... 123 1e-26
CR848717_1(CR848717|pid:none) Zebrafish DNA sequence from clone ... 123 1e-26
(A4IHD2) RecName: Full=Helicase ARIP4; EC=3.6.1.-; AltN... 123 1e-26
FN392320_672(FN392320|pid:none) Pichia pastoris GS115 chromosome... 122 2e-26
AP007169_330(AP007169|pid:none) Aspergillus oryzae RIB40 genomic... 122 2e-26
CP000589_113(CP000589|pid:none) Ostreococcus lucimarinus CCE9901... 122 2e-26
CR380949_58(CR380949|pid:none) Candida glabrata strain CBS138 ch... 122 2e-26
AC141111_14(AC141111|pid:none) Medicago truncatula clone mth2-20... 122 2e-26
BX465868_7(BX465868|pid:none) Zebrafish DNA sequence from clone ... 122 2e-26
CU928180_591(CU928180|pid:none) Kluyveromyces thermotolerans str... 122 2e-26
(O14139) RecName: Full=Chromodomain helicase hrp3; EC=3... 122 2e-26
CP000581_576(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 122 3e-26
(O14646) RecName: Full=Chromodomain-helicase-DNA-binding protein... 122 3e-26
AF181828_1(AF181828|pid:none) Nymphicus hollandicus chromosome Z... 122 3e-26
BC115822_1(BC115822|pid:none) Mus musculus chromodomain helicase... 122 3e-26
AF181824_1(AF181824|pid:none) Aegolius funereus chromosome W chr... 122 3e-26
AY217131_1(AY217131|pid:none) Taeniopygia guttata chromo-helicas... 122 3e-26
FN392319_386(FN392319|pid:none) Pichia pastoris GS115 chromosome... 122 3e-26
(P40201) RecName: Full=Chromodomain-helicase-DNA-binding protein... 122 3e-26
CU928180_235(CU928180|pid:none) Kluyveromyces thermotolerans str... 122 3e-26
D14316_1(D14316|pid:none) Gallus gallus mRNA for delta-crystalli... 122 3e-26
AF004397_1(AF004397|pid:none) Gallus gallus chromo-helicase-DNA-... 122 3e-26
BC117134_1(BC117134|pid:none) Homo sapiens chromodomain helicase... 122 3e-26
CR382129_11(CR382129|pid:none) Yarrowia lipolytica strain CLIB12... 121 4e-26
CR382131_97(CR382131|pid:none) Yarrowia lipolytica strain CLIB12... 121 4e-26
AM270162_16(AM270162|pid:none) Aspergillus niger contig An08c007... 121 5e-26
CU928180_627(CU928180|pid:none) Kluyveromyces thermotolerans str... 121 5e-26
BC080870_1(BC080870|pid:none) Xenopus tropicalis SWI/SNF related... 120 7e-26
(A2BGR3) RecName: Full=DNA excision repair protein ERCC-6-like; ... 120 7e-26
FN392322_123(FN392322|pid:none) Pichia pastoris GS115 chromosome... 120 7e-26
AM502232_88(AM502232|pid:none) Leishmania infantum chromosome 14. 120 7e-26
AF292095_1(AF292095|pid:none) Xenopus laevis imitation switch IS... 120 1e-25
AK140386_1(AK140386|pid:none) Mus musculus 4 days neonate thymus... 120 1e-25
CR382126_291(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 120 1e-25
BC122690_1(BC122690|pid:none) Bos taurus transcription terminati... 120 1e-25
(Q2NKX8) RecName: Full=DNA excision repair protein ERCC-6-like; ... 120 1e-25
AK074719_1(AK074719|pid:none) Homo sapiens cDNA FLJ90238 fis, cl... 120 1e-25
CR940347_357(CR940347|pid:none) Theileria annulata strain Ankara... 119 2e-25
AE017349_101(AE017349|pid:none) Cryptococcus neoformans var. neo... 119 2e-25
FN357305_17(FN357305|pid:none) Schistosoma mansoni genome sequen... 119 2e-25
CP000500_338(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 119 2e-25
(Q9US25) RecName: Full=Chromodomain helicase hrp1; EC=3... 119 2e-25
AC011806_3(AC011806|pid:none) Genomic Sequence For Oryza sativa ... 119 2e-25
AF073771_1(AF073771|pid:none) Homo sapiens RNA polymerase II ter... 119 2e-25
(Q9UNY4) RecName: Full=Transcription termination factor 2; ... 119 2e-25
AY051813_1(AY051813|pid:none) Drosophila melanogaster LD32234 fu... 119 3e-25
BC024298_1(BC024298|pid:none) Homo sapiens RAD54-like 2 (S. cere... 119 3e-25
AB018352_1(AB018352|pid:none) Homo sapiens mRNA for KIAA0809 pro... 119 3e-25
AY058653_1(AY058653|pid:none) Drosophila melanogaster LD35434 fu... 119 3e-25
AE013599_3388(AE013599|pid:none) Drosophila melanogaster chromos... 119 3e-25
AY095050_1(AY095050|pid:none) Drosophila melanogaster LD39323 fu... 119 3e-25
(Q22516) RecName: Full=Chromodomain-helicase-DNA-binding protein... 119 3e-25
FM992690_580(FM992690|pid:none) Candida dubliniensis CD36 chromo... 119 3e-25
BT011071_1(BT011071|pid:none) Drosophila melanogaster SD21488 fu... 119 3e-25
AF254373_1(AF254373|pid:none) Drosophila melanogaster DOMINO B (... 119 3e-25
BT044534_1(BT044534|pid:none) Drosophila melanogaster LP03212 fu... 119 3e-25
CU928171_608(CU928171|pid:none) Kluyveromyces thermotolerans str... 119 3e-25
BC001474_1(BC001474|pid:none) Homo sapiens RAD54-like 2 (S. cere... 119 3e-25
AE013599_3390(AE013599|pid:none) Drosophila melanogaster chromos... 119 3e-25
(A6QQR4) RecName: Full=DNA excision repair protein ERCC-6-like; ... 118 4e-25
BC154479_1(BC154479|pid:none) Danio rerio helicase, lymphoid-spe... 118 4e-25
AP008213_1862(AP008213|pid:none) Oryza sativa (japonica cultivar... 118 4e-25
AM910988_83(AM910988|pid:none) Plasmodium knowlesi strain H chro... 118 4e-25
BC070581_1(BC070581|pid:none) Xenopus laevis hypothetical protei... 118 4e-25
CT005253_88(CT005253|pid:none) Leishmania major strain Friedlin,... 118 4e-25
AM920431_481(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 118 4e-25
AL935288_3(AL935288|pid:none) Zebrafish DNA sequence from clone ... 118 4e-25
AE014185_229(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 118 5e-25
AK153826_1(AK153826|pid:none) Mus musculus 2 days neonate thymus... 118 5e-25
(Q14839) RecName: Full=Chromodomain-helicase-DNA-binding protein... 118 5e-25
BC143954_1(BC143954|pid:none) Homo sapiens SWI/SNF related, matr... 118 5e-25
(P28370) RecName: Full=Probable global transcription activator S... 118 5e-25
(Q6PDQ2) RecName: Full=Chromodomain-helicase-DNA-binding protein... 118 5e-25
AL022577_4(AL022577|pid:none) Human DNA sequence from clone RP3-... 118 5e-25
AK220473_1(AK220473|pid:none) Mus musculus mRNA for mKIAA4075 pr... 118 5e-25
FN392320_97(FN392320|pid:none) Pichia pastoris GS115 chromosome ... 118 5e-25
M89907_1(M89907|pid:none) Human global transcription activator h... 118 5e-25
AL117491_1(AL117491|pid:none) Homo sapiens mRNA; cDNA DKFZp434N2... 117 6e-25
CS300694_1(CS300694|pid:none) Sequence 202 from Patent EP1661986. 117 6e-25
AB007913_1(AB007913|pid:none) Homo sapiens mRNA for KIAA0444 pro... 117 6e-25
S44645(S44645;T16288)hypothetical protein F37A4.8 - Caenorhabdit... 117 6e-25
(Q8RWY3) RecName: Full=Putative chromatin-remodeling complex ATP... 117 6e-25
(Q8TDI0) RecName: Full=Chromodomain-helicase-DNA-binding protein... 117 6e-25
AF007780_1(AF007780|pid:none) Drosophila melanogaster CHD3 mRNA,... 117 6e-25
AY091030_1(AY091030|pid:none) Arabidopsis thaliana putative ATPa... 117 6e-25
AK079035_1(AK079035|pid:none) Mus musculus adult male epididymis... 117 8e-25
CU928179_909(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 117 8e-25
AL110281_1(AL110281|pid:none) Homo sapiens mRNA; cDNA DKFZp434K2... 117 8e-25
CU633455_71(CU633455|pid:none) Podospora anserina genomic DNA ch... 117 8e-25
AF217319_1(AF217319|pid:none) Mus musculus putative repair and r... 117 8e-25
AP007150_188(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 117 8e-25
Z92970_2(Z92970|pid:none) Caenorhabditis elegans Fosmid H06O01, ... 117 1e-24
AE016820_492(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 117 1e-24
T23056(T23056)chromodomain helicase H06O01.2 - Caenorhabditis el... 117 1e-24
AL391737_32(AL391737|pid:none) chromosome I of strain GB-M1 of E... 117 1e-24
U80033_2(U80033|pid:none) Caenorhabditis elegans cosmid T23H2, c... 116 1e-24
AY612850_1(AY612850|pid:none) Danio rerio PASG mRNA, complete cds. 116 1e-24
(Q8BHK9) RecName: Full=DNA excision repair protein ERCC-6-like; ... 116 1e-24
AF308445_1(AF308445|pid:none) Caenorhabditis elegans LET-418 (le... 116 2e-24
DQ402511_1(DQ402511|pid:none) Bombyx mori CHD1 (CHD1) mRNA, comp... 116 2e-24
BC035183_1(BC035183|pid:none) Homo sapiens chromosome 9 open rea... 116 2e-24
CU633901_345(CU633901|pid:none) Podospora anserina genomic DNA c... 116 2e-24
(Q5NC05) RecName: Full=Transcription termination factor 2; ... 115 2e-24
AE014134_63(AE014134|pid:none) Drosophila melanogaster chromosom... 115 2e-24
AL669937_4(AL669937|pid:none) Mouse DNA sequence from clone DN-3... 115 2e-24
AY903245_1(AY903245|pid:none) Rattus norvegicus strain WHD chrom... 115 2e-24
BC087733_1(BC087733|pid:none) Mus musculus transcription termina... 115 2e-24
AL596125_1(AL596125|pid:none) Mouse DNA sequence from clone RP23... 115 2e-24
AY903247_1(AY903247|pid:none) Rattus norvegicus strain SHRSP chr... 115 2e-24
BA000028_3075(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 115 2e-24
AE014134_62(AE014134|pid:none) Drosophila melanogaster chromosom... 115 2e-24
CT005264_212(CT005264|pid:none) Leishmania major strain Friedlin... 115 2e-24
AL596125_2(AL596125|pid:none) Mouse DNA sequence from clone RP23... 115 2e-24
AM494962_161(AM494962|pid:none) Leishmania braziliensis chromoso... 115 3e-24
CR940347_289(CR940347|pid:none) Theileria annulata strain Ankara... 115 3e-24
CR380958_504(CR380958|pid:none) Candida glabrata strain CBS138 c... 115 3e-24
CP000582_272(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 115 3e-24
U91543_1(U91543|pid:none) Homo sapiens zinc-finger helicase (hZF... 115 4e-24
(P34739) RecName: Full=Transcription termination factor 2; ... 115 4e-24
BC133719_1(BC133719|pid:none) Xenopus tropicalis chromodomain he... 115 4e-24
(Q12873) RecName: Full=Chromodomain-helicase-DNA-binding protein... 115 4e-24
BC124094_1(BC124094|pid:none) Danio rerio helicase, lymphoid-spe... 115 4e-24
BC156472_1(BC156472|pid:none) Synthetic construct Homo sapiens c... 115 4e-24
AC137701_13(AC137701|pid:none) Medicago truncatula clone mth2-35... 114 5e-24
CU928174_486(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 114 5e-24
CP001575_88(CP001575|pid:none) Micromonas sp. RCC299 chromosome ... 114 7e-24
BC020056_1(BC020056|pid:none) Mus musculus helicase, lymphoid sp... 114 7e-24
CR940352_114(CR940352|pid:none) Theileria annulata strain Ankara... 114 7e-24
AK296937_1(AK296937|pid:none) Homo sapiens cDNA FLJ59330 complet... 114 7e-24
BC100394_1(BC100394|pid:none) Mus musculus helicase, lymphoid sp... 114 7e-24
AK013266_1(AK013266|pid:none) Mus musculus 10, 11 days embryo wh... 114 7e-24
CR954207_416(CR954207|pid:none) Ostreococcus tauri strain OTTH05... 114 7e-24
JC4666(JC4666)lymphocyte specific helicase - mouse 114 7e-24
BX538352_70(BX538352|pid:none) Cryptosporidium parvum chromosome... 114 7e-24
BC168549_1(BC168549|pid:none) Xenopus tropicalis cDNA clone MGC:... 113 1e-23
(B5DE69) RecName: Full=Chromodomain-helicase-DNA-binding protein... 113 1e-23
CR954202_161(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 113 1e-23
AY118417_1(AY118417|pid:none) Drosophila melanogaster RE70645 fu... 113 1e-23
T33152(T33152)hypothetical protein T04D1.4 - Caenorhabditis eleg... 113 1e-23
AP003490_13(AP003490|pid:none) Oryza sativa Japonica Group genom... 113 1e-23
CP001323_433(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 112 2e-23
AL590451_42(AL590451|pid:none) chromosome IX of strain GB-M1 of ... 112 2e-23
CP001033_1597(CP001033|pid:none) Streptococcus pneumoniae CGSP14... 112 2e-23
AP004096_24(AP004096|pid:none) Oryza sativa Japonica Group genom... 112 3e-23
BC046866_1(BC046866|pid:none) Xenopus laevis chromodomain helica... 112 3e-23
AL021171_1(AL021171|pid:none) Caenorhabditis elegans Fosmid H04D... 112 3e-23
AB210316_1(AB210316|pid:none) Ciona intestinalis mRNA for ATRX p... 112 3e-23
AM746676_2993(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 112 3e-23
T23046(T23046;T23695)hypothetical protein M03C11.8 - Caenorhabdi... 112 3e-23
FN392320_922(FN392320|pid:none) Pichia pastoris GS115 chromosome... 112 3e-23
AM270388_18(AM270388|pid:none) Aspergillus niger contig An17c006... 111 4e-23
AD1643(AD1643) SNF2-type helicase homolog lin1685 [imported] - L... 111 4e-23
AY927849_1(AY927849|pid:none) Arabidopsis thaliana SPLAYED splic... 111 4e-23
AE017262_1649(AE017262|pid:none) Listeria monocytogenes str. 4b ... 111 4e-23
(Q8TBR9) RecName: Full=Chromodomain-helicase-DNA-binding protein... 111 6e-23
BC156439_1(BC156439|pid:none) Synthetic construct Homo sapiens c... 111 6e-23
EU730899_1(EU730899|pid:none) Brachypodium distachyon clone BAC ... 111 6e-23
(Q9JIX5) RecName: Full=Chromodomain-helicase-DNA-binding protein... 111 6e-23
(Q09XV5) RecName: Full=Chromodomain-helicase-DNA-binding protein... 111 6e-23
AY279398_1(AY279398|pid:none) Arabidopsis thaliana photoperiod i... 111 6e-23
AB046784_1(AB046784|pid:none) Homo sapiens mRNA for KIAA1564 pro... 111 6e-23
FN357451_6(FN357451|pid:none) Schistosoma mansoni genome sequenc... 111 6e-23
(B0R0I6) RecName: Full=Chromodomain-helicase-DNA-binding protein... 110 7e-23
(A7EQA8) RecName: Full=Putative DNA helicase INO80; EC=... 110 7e-23
AL928674_21(AL928674|pid:none) Zebrafish DNA sequence from clone... 110 7e-23
AB102721_1(AB102721|pid:none) Homo sapiens HELLS mRNA for lympho... 110 1e-22
AL109753_1(AL109753|pid:none) Human DNA sequence from clone RP5-... 110 1e-22
BC168553_1(BC168553|pid:none) Xenopus tropicalis chromodomain he... 110 1e-22
(Q9H0Z1) RecName: Full=Transcriptional regulator ATRX; ... 110 1e-22
CP001330_7(CP001330|pid:none) Micromonas sp. RCC299 chromosome 1... 110 1e-22
AB102718_1(AB102718|pid:none) Homo sapiens HELLS mRNA for lympho... 110 1e-22
AX356104_1(AX356104|pid:none) Sequence 1 from Patent WO0190320. 110 1e-22
U75653_1(U75653|pid:none) Human zinc finger helicase (Znf-HX) mR... 110 1e-22
AB102641_1(AB102641|pid:none) Homo sapiens ATRX mRNA, complete c... 110 1e-22
AB074174_1(AB074174|pid:none) Homo sapiens primary neuroblastoma... 110 1e-22
CP000903_1641(CP000903|pid:none) Bacillus weihenstephanensis KBA... 110 1e-22
AK001201_1(AK001201|pid:none) Homo sapiens cDNA FLJ10339 fis, cl... 110 1e-22
(Q76H81) RecName: Full=Lymphoid-specific helicase; EC=3... 110 1e-22
AL109753_2(AL109753|pid:none) Human DNA sequence from clone RP5-... 110 1e-22
AB102719_1(AB102719|pid:none) Homo sapiens HELLS mRNA for lympho... 110 1e-22
AB113249_1(AB113249|pid:none) Homo sapiens HELLS mRNA for lympho... 110 1e-22
AB102723_1(AB102723|pid:none) Homo sapiens HELLS mRNA for lympho... 110 1e-22
AE014133_1573(AE014133|pid:none) Streptococcus mutans UA159, com... 110 1e-22
AE017351_199(AE017351|pid:none) Cryptococcus neoformans var. neo... 110 1e-22
CP001334_203(CP001334|pid:none) Micromonas sp. RCC299 chromosome... 110 1e-22
I38614(I38614) helicase II - human &U09820_1(U09820|pid:none) 109 2e-22
AK161784_1(AK161784|pid:none) Mus musculus 13 days embryo foreli... 109 2e-22
(O13682) RecName: Full=Helicase swr1; EC=3.6.1.-; &CU3... 109 2e-22
(Q0UG82) RecName: Full=Putative DNA helicase INO80; EC=... 109 2e-22
(Q61687) RecName: Full=Transcriptional regulator ATRX; ... 109 2e-22
CU640366_1340(CU640366|pid:none) Podospora anserina genomic DNA ... 108 3e-22
AC034258_15(AC034258|pid:none) Oryza sativa chromosome 10 BAC OS... 108 3e-22
AE017194_1865(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 108 3e-22
AE014296_3433(AE014296|pid:none) Drosophila melanogaster chromos... 108 3e-22
(A1CZE5) RecName: Full=Putative DNA helicase ino80; EC=... 108 3e-22
AF119716_1(AF119716|pid:none) Drosophila melanogaster dMi-2 prot... 108 3e-22
AE004092_249(AE004092|pid:none) Streptococcus pyogenes M1 GAS, c... 108 4e-22
AP008216_759(AP008216|pid:none) Oryza sativa (japonica cultivar-... 108 4e-22
FN357585_11(FN357585|pid:none) Schistosoma mansoni genome sequen... 108 4e-22
AY647157_1(AY647157|pid:none) Homo sapiens KISH2 (KISH2) mRNA, c... 108 4e-22
AB037837_1(AB037837|pid:none) Homo sapiens mRNA for KIAA1416 pro... 108 4e-22
(A2AJK6) RecName: Full=Chromodomain-helicase-DNA-binding protein... 108 4e-22
CP000829_259(CP000829|pid:none) Streptococcus pyogenes NZ131, co... 108 4e-22
DQ333316_1(DQ333316|pid:none) Homo sapiens PRIC320 isoform 1 mRN... 108 4e-22
BX538033_1(BX538033|pid:none) Homo sapiens mRNA; cDNA DKFZp686J0... 108 4e-22
(Q3L8U1) RecName: Full=Chromodomain-helicase-DNA-binding protein... 108 4e-22
AM295007_1544(AM295007|pid:none) Streptococcus pyogenes Manfredo... 108 4e-22
CP000023_231(CP000023|pid:none) Streptococcus thermophilus LMG 1... 108 4e-22
(A2R9H9) RecName: Full=Putative DNA helicase ino80; EC=... 108 4e-22
(P32597) RecName: Full=Nuclear protein STH1/NPS1; EC=3.... 108 4e-22
(Q8BYH8) RecName: Full=Chromodomain-helicase-DNA-binding protein... 108 4e-22
AE009949_253(AE009949|pid:none) Streptococcus pyogenes MGAS8232,... 108 4e-22
CP000003_316(CP000003|pid:none) Streptococcus pyogenes MGAS10394... 108 4e-22
AM433721_7(AM433721|pid:none) Vitis vinifera contig VV78X233805.... 108 4e-22
CR382139_133(CR382139|pid:none) Debaryomyces hansenii strain CBS... 108 4e-22
(Q3B7N1) RecName: Full=Chromodomain-helicase-DNA-binding protein... 108 4e-22
CP000017_288(CP000017|pid:none) Streptococcus pyogenes MGAS5005,... 108 4e-22
DQ059482_1(DQ059482|pid:none) Homo sapiens ciprofibrate bound pr... 108 4e-22
CP000227_1715(CP000227|pid:none) Bacillus cereus Q1, complete ge... 108 5e-22
CP001177_1757(CP001177|pid:none) Bacillus cereus AH187, complete... 108 5e-22
AM920427_717(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 108 5e-22
(Q872I5) RecName: Full=Putative DNA helicase ino-80; EC... 108 5e-22
CP001283_1762(CP001283|pid:none) Bacillus cereus AH820, complete... 108 5e-22
CP001407_1653(CP001407|pid:none) Bacillus cereus 03BB102, comple... 108 5e-22
BX294010_4(BX294010|pid:none) Neurospora crassa DNA linkage grou... 108 5e-22
CP000259_288(CP000259|pid:none) Streptococcus pyogenes MGAS9429,... 107 6e-22
(A1C9W6) RecName: Full=Putative DNA helicase ino80; EC=... 107 6e-22
CP000764_1367(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 107 6e-22
AL766852_109(AL766852|pid:none) Streptococcus agalactiae NEM316 ... 107 6e-22
AM920436_1738(AM920436|pid:none) Penicillium chrysogenum Wiscons... 107 8e-22
BC052963_1(BC052963|pid:none) Homo sapiens Snf2-related CBP acti... 107 8e-22
AF143946_1(AF143946|pid:none) Homo sapiens transcriptional activ... 107 8e-22
(Q6ZRS2) RecName: Full=Helicase SRCAP; EC=3.6.1.-; AltN... 107 8e-22
BC172428_1(BC172428|pid:none) Synthetic construct Homo sapiens c... 107 8e-22
DQ075464_1(DQ075464|pid:none) Macropus eugenii ATRY (ATRY) mRNA,... 107 8e-22
FM992690_238(FM992690|pid:none) Candida dubliniensis CD36 chromo... 107 8e-22
AB384457_1(AB384457|pid:none) Synthetic construct DNA, clone: pF... 107 8e-22
AL590430_1(AL590430|pid:none) Mouse DNA sequence from clone RP23... 107 1e-21
CP001186_1645(CP001186|pid:none) Bacillus cereus G9842, complete... 107 1e-21
AL590430_2(AL590430|pid:none) Mouse DNA sequence from clone RP23... 107 1e-21
T00713(T00713)helicase homolog F22O13.8 - Arabidopsis thaliana 107 1e-21
(Q4IL82) RecName: Full=Putative DNA helicase INO80; EC=... 107 1e-21
AE015925_904(AE015925|pid:none) Chlamydophila caviae GPIC, compl... 107 1e-21
CU928171_378(CU928171|pid:none) Kluyveromyces thermotolerans str... 107 1e-21
BC150806_1(BC150806|pid:none) Mus musculus chromodomain helicase... 107 1e-21
BC168798_1(BC168798|pid:none) Xenopus tropicalis cDNA clone MGC:... 107 1e-21
EF560738_1(EF560738|pid:none) Homo sapiens clone DKFZp686J1099 C... 107 1e-21
BA000008_847(BA000008|pid:none) Chlamydophila pneumoniae J138 ge... 107 1e-21
CP000387_1714(CP000387|pid:none) Streptococcus sanguinis SK36, c... 106 1e-21
AK297135_1(AK297135|pid:none) Homo sapiens cDNA FLJ55722 complet... 106 1e-21
(Q9H6D4) RecName: Full=Chromodomain-helicase-DNA-binding protein... 106 1e-21
AL807369_10(AL807369|pid:none) Neurospora crassa DNA linkage gro... 106 1e-21
FN357312_11(FN357312|pid:none) Schistosoma mansoni genome sequen... 106 1e-21
AX876540_1(AX876540|pid:none) Sequence 11445 from Patent EP10746... 106 1e-21
(O14148) RecName: Full=Putative DNA helicase ino80; EC=... 106 1e-21
FN357312_10(FN357312|pid:none) Schistosoma mansoni genome sequen... 106 1e-21
FN357292_144(FN357292|pid:none) Schistosoma mansoni genome seque... 106 1e-21
AK295107_1(AK295107|pid:none) Homo sapiens cDNA FLJ56865 complet... 106 1e-21
AK001342_1(AK001342|pid:none) Homo sapiens cDNA FLJ10480 fis, cl... 106 1e-21
T38489(T38489) helicase - fission yeast (Schizosaccharomyces pom... 106 1e-21
AB037756_1(AB037756|pid:none) Homo sapiens mRNA for KIAA1335 pro... 106 1e-21
AL356378_7(AL356378|pid:none) Human DNA sequence from clone RP11... 106 1e-21
CR940347_91(CR940347|pid:none) Theileria annulata strain Ankara ... 106 2e-21
AB033085_1(AB033085|pid:none) Homo sapiens mRNA for KIAA1259 pro... 105 2e-21
CR382126_197(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 105 2e-21
BC142881_1(BC142881|pid:none) Danio rerio SWI/SNF related, matri... 105 2e-21
(Q9ULG1) RecName: Full=Putative DNA helicase INO80 complex homol... 105 2e-21
AY062186_1(AY062186|pid:none) Oryza sativa chromatin-remodeling ... 105 2e-21
AP008212_463(AP008212|pid:none) Oryza sativa (japonica cultivar-... 105 2e-21
BC057567_1(BC057567|pid:none) Mus musculus chromodomain helicase... 105 2e-21
FN357317_37(FN357317|pid:none) Schistosoma mansoni genome sequen... 105 2e-21
(Q9UTN6) RecName: Full=Chromatin structure-remodeling complex su... 105 2e-21
CP000502_77(CP000502|pid:none) Pichia stipitis CBS 6054 chromoso... 105 2e-21
AP005919_4(AP005919|pid:none) Oryza sativa Japonica Group genomi... 105 2e-21
BC077794_1(BC077794|pid:none) Xenopus laevis helicase, lymphoid-... 105 3e-21
(O94421) RecName: Full=SWI/SNF chromatin-remodeling complex subu... 105 3e-21
BC029381_1(BC029381|pid:none) Homo sapiens helicase, lymphoid-sp... 105 3e-21
(Q9NEL2) RecName: Full=Helicase ssl-1; EC=3.6.1.-; AltN... 105 3e-21
CR382131_364(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 105 3e-21
(Q5BAZ5) RecName: Full=Putative DNA helicase ino80; EC=... 105 3e-21
AY069786_1(AY069786|pid:none) Drosophila melanogaster SD02886 fu... 105 4e-21
BC059235_1(BC059235|pid:none) Mus musculus INO80 complex homolog... 105 4e-21
(Q4IAK7) RecName: Full=Helicase SWR1; EC=3.6.1.-; 105 4e-21
AE016818_715(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 105 4e-21
AK017912_1(AK017912|pid:none) Mus musculus adult male thymus cDN... 105 4e-21
AK129317_1(AK129317|pid:none) Mus musculus premature mRNA for mK... 105 4e-21
(Q9VDY1) RecName: Full=Putative DNA helicase Ino80; Sho... 105 4e-21
CP000725_507(CP000725|pid:none) Streptococcus gordonii str. Chal... 104 5e-21
AL929049_3(AL929049|pid:none) Zebrafish DNA sequence from clone ... 104 5e-21
AY303939_1(AY303939|pid:none) Pichia angusta global transcriptio... 104 5e-21
AK296955_1(AK296955|pid:none) Homo sapiens cDNA FLJ59295 partial... 104 5e-21
B84645(B84645)hypothetical protein At2g25170 [imported] - Arabid... 104 5e-21
(Q5K8T2) RecName: Full=Helicase SWR1; EC=3.6.1.-; &AE0... 104 5e-21
AK229409_1(AK229409|pid:none) Arabidopsis thaliana mRNA for puta... 104 5e-21
AE016830_2507(AE016830|pid:none) Enterococcus faecalis V583, com... 104 5e-21
(Q9S775) RecName: Full=CHD3-type chromatin-remodeling factor PIC... 104 5e-21
AX528684_1(AX528684|pid:none) Sequence 17 from Patent WO0246443. 104 7e-21
BT042191_1(BT042191|pid:none) Zea mays full-length cDNA clone ZM... 104 7e-21
CP000498_251(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 104 7e-21
CP001325_539(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 104 7e-21
AP003227_41(AP003227|pid:none) Oryza sativa Japonica Group genom... 104 7e-21
AC105379_56(AC105379|pid:none) Trypanosoma brucei chromosome 3 c... 104 7e-21
AK027631_1(AK027631|pid:none) Homo sapiens cDNA FLJ14725 fis, cl... 103 9e-21
AL512768_1(AL512768|pid:none) Homo sapiens mRNA; cDNA DKFZp434A1... 103 9e-21
(Q9H4L7) RecName: Full=SWI/SNF-related matrix-associated actin-d... 103 9e-21
AB169326_1(AB169326|pid:none) Macaca fascicularis testis cDNA, c... 103 9e-21
AK301668_1(AK301668|pid:none) Homo sapiens cDNA FLJ58701 complet... 103 9e-21
FN392320_1198(FN392320|pid:none) Pichia pastoris GS115 chromosom... 103 9e-21
AB032948_1(AB032948|pid:none) Homo sapiens mRNA for KIAA1122 pro... 103 9e-21
FM992695_429(FM992695|pid:none) Candida dubliniensis CD36 chromo... 103 9e-21
AL359929_1(AL359929|pid:none) Homo sapiens mRNA; cDNA DKFZp762K2... 103 9e-21
(Q6BGY8) RecName: Full=Putative DNA helicase INO80; EC=... 103 9e-21
AB385429_1(AB385429|pid:none) Synthetic construct DNA, clone: pF... 103 9e-21
AP008955_3688(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 103 1e-20
AP008955_2641(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 103 1e-20
CR382132_1194(CR382132|pid:none) Yarrowia lipolytica strain CLIB... 103 1e-20
AE016817_302(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 103 1e-20
AX528672_1(AX528672|pid:none) Sequence 5 from Patent WO0246443. 103 1e-20
AF462829_1(AF462829|pid:none) Arabidopsis thaliana AT5g63950/MBM... 103 2e-20
CP000051_737(CP000051|pid:none) Chlamydia trachomatis A/HAR-13, ... 103 2e-20
FM211187_1402(FM211187|pid:none) Streptococcus pneumoniae ATCC 7... 102 2e-20
CP000612_3196(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 102 2e-20
AE005176_2042(AE005176|pid:none) Lactococcus lactis subsp. lacti... 102 2e-20
CP000918_1471(CP000918|pid:none) Streptococcus pneumoniae 70585,... 102 2e-20
CP001083_1615(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 102 2e-20
CP001015_1433(CP001015|pid:none) Streptococcus pneumoniae G54, c... 102 2e-20
CP001033_1508(CP001033|pid:none) Streptococcus pneumoniae CGSP14... 102 2e-20
CP000920_1413(CP000920|pid:none) Streptococcus pneumoniae P1031,... 102 2e-20
(Q7ZU90) RecName: Full=Chromodomain-helicase-DNA-binding protein... 102 2e-20
AM406671_2273(AM406671|pid:none) Lactococcus lactis subsp. cremo... 102 2e-20
CP001393_430(CP001393|pid:none) Anaerocellum thermophilum DSM 67... 102 2e-20
CP000921_1344(CP000921|pid:none) Streptococcus pneumoniae Taiwan... 102 2e-20
CR954217_197(CR954217|pid:none) Ostreococcus tauri strain OTTH05... 102 2e-20
AE016816_490(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 102 3e-20
AE001273_725(AE001273|pid:none) Chlamydia trachomatis D/UW-3/CX,... 102 3e-20
(Q6CJ38) RecName: Full=Helicase SWR1; EC=3.6.1.-; &CR3... 102 3e-20
CP000113_5215(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 102 3e-20
(P22082) RecName: Full=Transcription regulatory protein SNF2; ... 102 3e-20
CR380953_373(CR380953|pid:none) Candida glabrata strain CBS138 c... 102 3e-20
CR382126_326(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 102 3e-20
(Q4WAS9) RecName: Full=Helicase swr1; EC=3.6.1.-; 102 3e-20
AF016425_4(AF016425|pid:none) Caenorhabditis elegans cosmid F59A... 102 3e-20
AM884177_77(AM884177|pid:none) Chlamydia trachomatis L2b/UCH-1/p... 102 3e-20
CP001575_509(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 102 3e-20
AM270258_21(AM270258|pid:none) Aspergillus niger contig An12c001... 102 3e-20
AK023990_1(AK023990|pid:none) Homo sapiens cDNA FLJ13928 fis, cl... 102 3e-20
AM910987_113(AM910987|pid:none) Plasmodium knowlesi strain H chr... 102 3e-20
AM270143_13(AM270143|pid:none) Aspergillus niger contig An07c026... 102 3e-20
CU928176_224(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 102 3e-20
BX294149_120(BX294149|pid:none) Rhodopirellula baltica SH 1 comp... 102 3e-20
AF000196_11(AF000196|pid:none) Caenorhabditis elegans cosmid B00... 102 3e-20
FN357294_49(FN357294|pid:none) Schistosoma mansoni genome sequen... 102 3e-20
(Q7S133) RecName: Full=Helicase swr-1; EC=3.6.1.-; 102 3e-20
AE014134_1792(AE014134|pid:none) Drosophila melanogaster chromos... 102 3e-20
FJ362379_7(FJ362379|pid:none) Caenorhabditis sp. PS1010 contig J... 101 4e-20
(P31380) RecName: Full=Uncharacterized ATP-dependent helicase YA... 101 4e-20
(Q4PGL2) RecName: Full=Putative DNA helicase INO80; EC=... 101 4e-20
EU430758_1(EU430758|pid:none) Homo sapiens SMARCA4 isoform 4 mRN... 101 6e-20
(A7TJI3) RecName: Full=Putative DNA helicase INO80; EC=... 101 6e-20
EU430756_1(EU430756|pid:none) Homo sapiens SMARCA4 isoform 3 mRN... 101 6e-20
AF254822_1(AF254822|pid:none) Homo sapiens SMARCA4 isoform (SMAR... 101 6e-20
BC136644_1(BC136644|pid:none) Homo sapiens SWI/SNF related, matr... 101 6e-20
I53078(I53078) homeotic gene regulator - mouse (fragment) &S681... 101 6e-20
AK160825_1(AK160825|pid:none) Mus musculus 10 days embryo whole ... 101 6e-20
AK147047_1(AK147047|pid:none) Mus musculus 17 days embryo kidney... 101 6e-20
(P53115) RecName: Full=Putative DNA helicase INO80; EC=... 101 6e-20
AK303352_1(AK303352|pid:none) Homo sapiens cDNA FLJ60382 complet... 101 6e-20
EU430757_1(EU430757|pid:none) Homo sapiens SMARCA4 isoform 2 mRN... 101 6e-20
AM260479_559(AM260479|pid:none) Ralstonia eutropha H16 chromosom... 101 6e-20
BC042442_1(BC042442|pid:none) Mus musculus SWI/SNF-related, matr... 101 6e-20
BC060229_1(BC060229|pid:none) Mus musculus SWI/SNF related, matr... 101 6e-20
AM920428_231(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 101 6e-20
D26156_1(D26156|pid:none) Homo sapiens mRNA for transcriptional ... 101 6e-20
AK299761_1(AK299761|pid:none) Homo sapiens cDNA FLJ60344 complet... 101 6e-20
(P51532) RecName: Full=Probable global transcription activator S... 101 6e-20
CR954204_225(CR954204|pid:none) Ostreococcus tauri strain OTTH05... 101 6e-20
BC153216_1(BC153216|pid:none) Bos taurus SWI/SNF related, matrix... 101 6e-20
AJ504723_1(AJ504723|pid:none) Rattus norvegicus partial mRNA for... 101 6e-20
AP007150_297(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 101 6e-20
FN392320_1272(FN392320|pid:none) Pichia pastoris GS115 chromosom... 101 6e-20
BC089242_1(BC089242|pid:none) Xenopus tropicalis SWI/SNF-related... 101 6e-20
AK166837_1(AK166837|pid:none) Mus musculus blastocyst blastocyst... 101 6e-20
AC006127_1(AC006127|pid:none) Homo sapiens chromosome 19, cosmid... 101 6e-20
(Q04692) RecName: Full=SWI/SNF-related matrix-associated actin-d... 101 6e-20
Z48618_5(Z48618|pid:none) S.cerevisiae genes for RAD54, ACE1(CUP... 101 6e-20
AE017126_47(AE017126|pid:none) Prochlorococcus marinus subsp. ma... 100 8e-20
AL049607_10(AL049607|pid:none) Arabidopsis thaliana DNA chromoso... 100 8e-20
(Q5ARK3) RecName: Full=Helicase swr1; EC=3.6.1.-; 100 8e-20
CU928169_543(CU928169|pid:none) Kluyveromyces thermotolerans str... 100 8e-20
AM910993_249(AM910993|pid:none) Plasmodium knowlesi strain H chr... 100 8e-20
AP009552_337(AP009552|pid:none) Microcystis aeruginosa NIES-843 ... 100 8e-20
CP000407_1714(CP000407|pid:none) Streptococcus suis 05ZYH33, com... 100 1e-19
AF230280_1(AF230280|pid:none) Caenorhabditis elegans SWI2/SNF2-l... 100 1e-19
(P43610) RecName: Full=Uncharacterized ATP-dependent helicase YF... 100 1e-19
AB287295_1(AB287295|pid:none) Mus musculus TAF170 mRNA for TBP-a... 100 1e-19
(Q6FK48) RecName: Full=Helicase SWR1; EC=3.6.1.-; &CR3... 100 1e-19
AK088840_1(AK088840|pid:none) Mus musculus 2 days neonate thymus... 100 1e-19
>BC067986_1(BC067986|pid:none) Xenopus tropicalis RAD54-like (S.
cerevisiae), mRNA (cDNA clone MGC:69368 IMAGE:5309406),
complete cds.
Length = 742
Score = 241 bits (616), Expect = 3e-62
Identities = 122/257 (47%), Positives = 166/257 (64%)
Frame = +3
Query: 219 LKLFPKEWNPKVFQPQYSSKLLFVDRLLANIRNSKSGDKTVIISNYTQTLEVLATMCKTR 398
L LFP ++ K +PQ S K+L +D +LA + S S DK V++SNYTQTL++ +C+TR
Sbjct: 476 LNLFPSGYSTKSVEPQLSGKMLVLDYILA-VTRSTSSDKVVLVSNYTQTLDLFEKLCRTR 534
Query: 399 GYAYFQLDGSTANAKRQQLVNLYNDPARPEFVFLLSSKAGGVGLNLIGGNHLVLFDADWN 578
Y Y +LDG+ + KR ++V +N P+ PEF+F+LSSKAGG GLNLIG N LV+FD DWN
Sbjct: 535 RYLYVRLDGTMSIKKRAKIVERFNSPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 594
Query: 579 PANDAQSMARVWREGQKKIVSIYRTFTTGTIEEKIFQRQLTKQALSTSITEGDSDNSPSF 758
PAND Q+MARVWR+GQKK IYR +TGTIEEKIFQRQ K+ALS+ + + + D F
Sbjct: 595 PANDEQAMARVWRDGQKKTCFIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVERHF 654
Query: 759 DSKDLKDIFTLREDTLCDTHDMLSCKCAPTVGGKIPKHKRDTMSISELNSWHHFHQMEKI 938
+LK++F L E+T DTHD C+ G ++ T S+L+ W+H +
Sbjct: 655 SIGELKELFILNENTTSDTHDKFKCRRCVN-GHQVRPPPDGTDCTSDLSQWNHCADKRGL 713
Query: 939 KDQKVASACQDIATFVF 989
+D + SA TF F
Sbjct: 714 QDPVLVSAWDAAITFTF 730
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,760,428,233
Number of extensions: 35695355
Number of successful extensions: 83992
Number of sequences better than 10.0: 1413
Number of HSP's gapped: 83621
Number of HSP's successfully gapped: 1415
Length of query: 395
Length of database: 1,040,966,779
Length adjustment: 131
Effective length of query: 264
Effective length of database: 621,205,444
Effective search space: 163998237216
Effective search space used: 163998237216
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
3 |
| VF (FL, S) |
0 |
| AH (FL, L) |
21 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
13 |
| SF (FL, S) |
0 |
| CH (FL, L) |
10 |
| CF (FL, S) |
1 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |