Contig-U11233-1
Contig ID Contig-U11233-1
Contig update 2002.12.18
Contig sequence
>Contig-U11233-1 (Contig-U11233-1Q) /CSM_Contig/Contig-U11233-1Q.Seq.d
ACATTTTCTTTTATTTTTTTATTTTTTATTTTTTTATTTTTATTTTTTTA
ATTTTTTTTAAAATAATGCAATCAAATAAATGTTTTTATAAAGCAACAAA
GAAAGGAACAATTATAAAAGTTGTAAATGAAATTTATTTAAGAGATGATA
TACCATGTGGACATGATAGTTGTAAAGAATGTAAAATCAAATTAGAGAGA
AGGACAACAGTTGAAGATAGAGCATTATTATCAAACGAAATCAATACAAT
TGATTCTGATAAAATATTAATATTAGATACAAATGTAATATTGCACCAAA
TTGATTTATTAGAAGATCCAACCATAAAGAATTGTATAATATTATCAACG
GTATTAGATGAAGTTAAATCACAAAATCGTGCAATCTTTAATCGTATACG
TGATGTAATTAAAGAATCCTCAAGAAAATTTTATGTTTACTCTAATGAAT
ATAGTACATTCACATCAATCACTAGAGAAAATGGTGAATCGCCAAATGAT
AGAAATGATCGTGCAATTCGTGTAGCTACTCAATGGTATAAATCACATCT
TCATAAATATTCAATTAAAGTTTTATTAATTACAAATGATAAAGATAATT
TAAAAAAAGCAAAATCATTAGGTTTAGATTGTCAAACTATTCAAGATTTA
GTATTTGAATTATC----------ATTAATCAACACACTGGTGAAATCAT
TGCAGTCGAATATACTAAAAGTATAATTCGTTCATGTGCATCTCTAACCT
ATGAACAAGCACAAATTAGAATTGATGATAAATCTCAAAATGATCAAATC
ACAGTAAATCTTAGAAATTTAAATAGTTTAGCAAAAATTCTTAGAAAACA
ACGTTTCGATAGGGGTGCACTCTATTTAGCTTCACCACAAGTTAAATTCA
AGACTGAAGAATTGGGTGGTGATCCATCCGATGTTGAAATTTATCAACTT
CGTGAAACAAATTCAATGATTGAAGAGTTTATGTTGTTAGCAAATATTTG
GGTTGCCAAGAAAATTTATAAACATTTCCCAGGTTGTGCTATGTTACGTC
GTCATCCAACTCCAAATAAAGCAGCTTTCGATTTATTGACAAAGTTAATC
GAGAATAAAGGTTACAAATTCTCAACCACCACAAGTAAAGATTTAGCAGA
TTCATTGGATTCCGCTGTAGATAAGAACGATTCATACTTTAATACCCTAT
GTCGTATTATGACAACCCGTTGCATGTCACCAGCTAAATATTTCTCATCA
GGTTCATTACCATATGAAGATTTTAATCATTATGGTTTGGCCACTGATAT
TTACACTCATTTCACATCACCAATTCGTCGTTATCCAGATATTATAGTTC
ATCGTTTATTAGCTTCTGCAATTGGTATTCAATCAGTTTCATTAAATTTA
GAGAATAAAACCATTTCAGCATTAACAGAGAATAATAATTTCCGTCATAA
AATGGCTCAATACGCAAGTAGAGGTTCAACTCAACTTCATACTTTAATCT
TTTTCAAAGGTCGTAAATCTGTTGAAGATGCTTATATCATTCGTGTAAAA
GCTAATGCTTTTGTTGTATTAGTGCCACGTTATGGTTTTGAAGGTACTGT
TTATGTTTCTGATCCAAATTCTTCAACTGCTACCACCAATGGTGGTGGTG
GCACATCTAATATTTATAATTATAATCATGAAGATCAAACACTTGGTAAT
GGTATTCATACTTTTAGAGTATTTGATAAAGTTACTGTTGAAATTTATGT
TGATGATAGTAAAGCTCATGATCAAAAATTAAAAATTAATTGTATAAATC
CAAATATTTCATTCGTACCATCTGATGATATTGATAGTAATAATTTAGAT
GATATTTTAAATCAAGAAAATAATATTAATAAATCAACTTCCTCTACCTC
ATCTTCAAATAAATCTTCAAAAGTTAGAAAACAACCTGAAAATATAAAAT
CTTCAACAAAACCAACATCAAATAAAAAATTAAAAAAATAAAATAATAAA
ATAAAATAAAATAAAATAAAACAAAACTTTTA

Gap gap included
Contig length 2022
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 3134919
End point 3132897
Strand (PLUS/MINUS) MINUS
Number of clones 10
Number of EST 16
Link to clone list U11233
List of clone(s)

est1=VHA556F,1,573
est2=VHE324F,36,621
est3=VHI809F,36,621
est4=AHO258F,42,642
est5=AHC431F,50,640
est6=AHE304F,60,621
est7=VHD421F,65,621
est8=SHI438F,68,662
est9=CHN327F,74,664
est10=VHE324Z,665,1409
est11=VHI809Z,1167,1951
est12=AHO463Z,1282,2000
est13=AHC431Z,1284,1951
est14=AHE304Z,1291,2023
est15=VHA556Z,1291,1939
est16=VHD421Z,1293,2000
Translated Amino Acid sequence
IFFYFFIFYFFIFIFLIFFKIMQSNKCFYKATKKGTIIKVVNEIYLRDDIPCGHDSCKEC
KIKLERRTTVEDRALLSNEINTIDSDKILILDTNVILHQIDLLEDPTIKNCIILSTVLDE
VKSQNRAIFNRIRDVIKESSRKFYVYSNEYSTFTSITRENGESPNDRNDRAIRVATQWYK
SHLHKYSIKVLLITNDKDNLKKAKSLGLDCQTIQDLVFEL---

---INQHTGEIIAVEYTKSIIRSCASLTYEQAQIRIDDKSQNDQITVNLRNLNSLAKILR
KQRFDRGALYLASPQVKFKTEELGGDPSDVEIYQLRETNSMIEEFMLLANIWVAKKIYKH
FPGCAMLRRHPTPNKAAFDLLTKLIENKGYKFSTTTSKDLADSLDSAVDKNDSYFNTLCR
IMTTRCMSPAKYFSSGSLPYEDFNHYGLATDIYTHFTSPIRRYPDIIVHRLLASAIGIQS
VSLNLENKTISALTENNNFRHKMAQYASRGSTQLHTLIFFKGRKSVEDAYIIRVKANAFV
VLVPRYGFEGTVYVSDPNSSTATTNGGGGTSNIYNYNHEDQTLGNGIHTFRVFDKVTVEI
YVDDSKAHDQKLKINCINPNISFVPSDDIDSNNLDDILNQENNINKSTSSTSSSNKSSKV
RKQPENIKSSTKPTSNKKLKK*nnkik*nkikqnf


Translated Amino Acid sequence (All Frames)
Frame A:
tfsfiflffiflflff*fflk*cnqinvfikqqrkeql*kl*mkfi*emiyhvdmivvkn
vksn*regqqlkiehyyqtksiqliliky*y*iqm*yctkliy*kiqp*riv*yyqry*m
klnhkivqslivyvm*lknpqenfmftlmnivhshqslekmvnrqmiemivqfv*llngi
nhifiniqlkfy*lqmikii*kkqnh*v*ivklfki*ylny---

---INQHTGEIIAVEYTKSIIRSCASLTYEQAQIRIDDKSQNDQITVNLRNLNSLAKILR
KQRFDRGALYLASPQVKFKTEELGGDPSDVEIYQLRETNSMIEEFMLLANIWVAKKIYKH
FPGCAMLRRHPTPNKAAFDLLTKLIENKGYKFSTTTSKDLADSLDSAVDKNDSYFNTLCR
IMTTRCMSPAKYFSSGSLPYEDFNHYGLATDIYTHFTSPIRRYPDIIVHRLLASAIGIQS
VSLNLENKTISALTENNNFRHKMAQYASRGSTQLHTLIFFKGRKSVEDAYIIRVKANAFV
VLVPRYGFEGTVYVSDPNSSTATTNGGGGTSNIYNYNHEDQTLGNGIHTFRVFDKVTVEI
YVDDSKAHDQKLKINCINPNISFVPSDDIDSNNLDDILNQENNINKSTSSTSSSNKSSKV
RKQPENIKSSTKPTSNKKLKK*nnkik*nkikqnf

Frame B:
hfllffyflffyfyffnff*nnaik*mfl*snkernnyksck*nlfkr*ytmwt**l*rm
*nqirekdns*r*siiikrnqyn*f**ninirykcniapn*firrsnhkelyniingir*
s*itkscnl*syt*cn*rilkkilcll**i*yihinh*rkw*iak**k*scnscsysmv*
itss*ifn*sfinyk**r*fkkskiirfrlsnysrfsi*ii---

---lintlvkslqsnilkv*fvhvhl*pmnkhklelminlkmiksq*ilei*iv*qkfle
nnvsigvhsi*lhhklnsrlknwvvihpmlkfinfvkqiq*lkslcc*qifglprkfini
sqvvlcyvviqlqikqlsiy*qs*srikvtnsqppqvki*qihwipl*irtihtlipyvv
l*qpvachqlnishqvhyhmkiliimvwpliftlishhqfvviqil*fivy*llqlvfnq
fh*i*rikpfqh*qriiisvikwlntqvevqlnfil*sfskvvnllkmlisfv*klmlll
y*chvmvlkvlfmfliqilqllppmvvvahlifiiiimkikhlvmvfilleyliklllkf
mlmivklmikn*kliv*iqifhsyhlmilivii*mif*ikkiilinqlplphlqinlqkl
ennlki*nlqqnqhqikn*knkiik*nkik*nktf

Frame C:
IFFYFFIFYFFIFIFLIFFKIMQSNKCFYKATKKGTIIKVVNEIYLRDDIPCGHDSCKEC
KIKLERRTTVEDRALLSNEINTIDSDKILILDTNVILHQIDLLEDPTIKNCIILSTVLDE
VKSQNRAIFNRIRDVIKESSRKFYVYSNEYSTFTSITRENGESPNDRNDRAIRVATQWYK
SHLHKYSIKVLLITNDKDNLKKAKSLGLDCQTIQDLVFEL---

---*sthw*nhcsriy*kynsfmcisnl*tstn*n***isk*snhsks*kfk*fskns*k
ttfr*gctlfsftts*iqd*rigw*sirc*nlsts*nkfnd*rvyvvskylgcqenl*tf
prlcyvtsssnsk*ssfrfidkvnre*rlqilnhhk*rfsrfigfrcr*erfil*ypmsy
ydnplhvts*iflirfiti*rf*slwfgh*ylhsfhitnsslsryysssfisfcnwysis
fikfre*nhfsinre**fps*ngsirk*rfnstsyfnlfqrs*ic*rclyhscks*cfcc
isatlwf*ryclcf*skffncyhqwwwwhi*yl*l*s*rsntw*wysyf*si**syc*nl
c****ss*skikn*lykskyfirti**y****fr*yfksrk*y**inflylifk*ifks*
ktt*kykifnktnik*kikkik**nkik*nktkll

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11233-1 (Contig-U11233-1Q)
/CSM_Contig/Contig-U11233-1Q.Seq.d
(2032 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11233-1 (Contig-U11233-1Q) /CSM_Contig/Conti... 3578 0.0
Contig-U14717-1 (Contig-U14717-1Q) /CSM_Contig/Conti... 44 6e-04
Contig-U11140-1 (Contig-U11140-1Q) /CSM_Contig/Conti... 40 0.009
Contig-U10985-1 (Contig-U10985-1Q) /CSM_Contig/Conti... 38 0.037
Contig-U10424-1 (Contig-U10424-1Q) /CSM_Contig/Conti... 38 0.037
Contig-U01479-1 (Contig-U01479-1Q) /CSM_Contig/Conti... 38 0.037
Contig-U14793-1 (Contig-U14793-1Q) /CSM_Contig/Conti... 36 0.14
Contig-U14112-1 (Contig-U14112-1Q) /CSM_Contig/Conti... 36 0.14
Contig-U12307-1 (Contig-U12307-1Q) /CSM_Contig/Conti... 36 0.14
Contig-U12231-1 (Contig-U12231-1Q) /CSM_Contig/Conti... 36 0.14

>Contig-U11233-1 (Contig-U11233-1Q) /CSM_Contig/Contig-U11233-1Q.Seq.d
Length = 2032

Score = 3578 bits (1805), Expect = 0.0
Identities = 1849/1856 (99%)
Strand = Plus / Plus


Query: 60 aaaataatgcaatcaaataaatgtttttataaagcaacaaagaaaggaacaattataaaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 aaaataatgcaatcaaataaatgtttttataaagcaacaaagaaaggaacaattataaaa 119


Query: 120 gttgtaaatgaaatttatttaagagatgatataccatgtggacatgatagttgtaaagaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gttgtaaatgaaatttatttaagagatgatataccatgtggacatgatagttgtaaagaa 179


Query: 180 tgtaaaatcaaattagagagaaggacaacagttgaagatagagcattattatcaaacgaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tgtaaaatcaaattagagagaaggacaacagttgaagatagagcattattatcaaacgaa 239


Query: 240 atcaatacaattgattctgataaaatattaatattagatacaaatgtaatattgcaccaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 atcaatacaattgattctgataaaatattaatattagatacaaatgtaatattgcaccaa 299


Query: 300 attgatttattagaagatccaaccataaagaattgtataatattatcaacggtattagat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 attgatttattagaagatccaaccataaagaattgtataatattatcaacggtattagat 359


Query: 360 gaagttaaatcacaaaatcgtgcaatctttaatcgtatacgtgatgtaattaaagaatcc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gaagttaaatcacaaaatcgtgcaatctttaatcgtatacgtgatgtaattaaagaatcc 419


Query: 420 tcaagaaaattttatgtttactctaatgaatatagtacattcacatcaatcactagagaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tcaagaaaattttatgtttactctaatgaatatagtacattcacatcaatcactagagaa 479


Query: 480 aatggtgaatcgccaaatgatagaaatgatcgtgcaattcgtgtagctactcaatggtat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aatggtgaatcgccaaatgatagaaatgatcgtgcaattcgtgtagctactcaatggtat 539


Query: 540 aaatcacatcttcataaatattcaattaaagttttattaattacaaatgataaagataat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 aaatcacatcttcataaatattcaattaaagttttattaattacaaatgataaagataat 599


Query: 600 ttnnnnnnngcaaaatcattaggtttagattgtcaaactattcaagatttagtatttgaa 659
|| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ttaaaaaaagcaaaatcattaggtttagattgtcaaactattcaagatttagtatttgaa 659


Query: 660 ttatcnnnnnnnnnnattaatcaacacactggtgaaatcattgcagtcgaatatactaaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ttatcnnnnnnnnnnattaatcaacacactggtgaaatcattgcagtcgaatatactaaa 719


Query: 720 agtataattcgttcatgtgcatctctaacctatgaacaagcacaaattagaattgatgat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 agtataattcgttcatgtgcatctctaacctatgaacaagcacaaattagaattgatgat 779


Query: 780 aaatctcaaaatgatcaaatcacagtaaatcttagaaatttaaatagtttagcaaaaatt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 aaatctcaaaatgatcaaatcacagtaaatcttagaaatttaaatagtttagcaaaaatt 839


Query: 840 cttagaaaacaacgtttcgataggggtgcactctatttagcttcaccacaagttaaattc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 cttagaaaacaacgtttcgataggggtgcactctatttagcttcaccacaagttaaattc 899


Query: 900 aagactgaagaattgggtggtgatccatccgatgttgaaatttatcaacttcgtgaaaca 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 aagactgaagaattgggtggtgatccatccgatgttgaaatttatcaacttcgtgaaaca 959


Query: 960 aattcaatgattgaagagtttatgttgttagcaaatatttgggttgccaagaaaatttat 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 aattcaatgattgaagagtttatgttgttagcaaatatttgggttgccaagaaaatttat 1019


Query: 1020 aaacatttcccaggttgtgctatgttacgtcgtcatccaactccaaataaagcagctttc 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 aaacatttcccaggttgtgctatgttacgtcgtcatccaactccaaataaagcagctttc 1079


Query: 1080 gatttattgacaaagttaatcgagaataaaggttacaaattctcaaccaccacaagtaaa 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 gatttattgacaaagttaatcgagaataaaggttacaaattctcaaccaccacaagtaaa 1139


Query: 1140 gatttagcagattcattggattccgctgtagataagaacgattcatactttaatacccta 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 gatttagcagattcattggattccgctgtagataagaacgattcatactttaatacccta 1199


Query: 1200 tgtcgtattatgacaacccgttgcatgtcaccagctaaatatttctcatcaggttcatta 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 tgtcgtattatgacaacccgttgcatgtcaccagctaaatatttctcatcaggttcatta 1259


Query: 1260 ccatatgaagattttaatcattatggtttggccactgatatttacactcatttcacatca 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 ccatatgaagattttaatcattatggtttggccactgatatttacactcatttcacatca 1319


Query: 1320 ccaattcgtcgttatccagatattatagttcatcgtttattagcttctgcaattggtatt 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1320 ccaattcgtcgttatccagatattatagttcatcgtttattagcttctgcaattggtatt 1379


Query: 1380 caatcagtttcattaaatttagagaataaaaccatttcagcattaacagagaataataat 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1380 caatcagtttcattaaatttagagaataaaaccatttcagcattaacagagaataataat 1439


Query: 1440 ttccgtcataaaatggctcaatacgcaagtagaggttcaactcaacttcatactttaatc 1499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1440 ttccgtcataaaatggctcaatacgcaagtagaggttcaactcaacttcatactttaatc 1499


Query: 1500 tttttcaaaggtcgtaaatctgttgaagatgcttatatcattcgtgtaaaagctaatgct 1559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1500 tttttcaaaggtcgtaaatctgttgaagatgcttatatcattcgtgtaaaagctaatgct 1559


Query: 1560 tttgttgtattagtgccacgttatggttttgaaggtactgtttatgtttctgatccaaat 1619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1560 tttgttgtattagtgccacgttatggttttgaaggtactgtttatgtttctgatccaaat 1619


Query: 1620 tcttcaactgctaccaccaatggtggtggtggcacatctaatatttataattataatcat 1679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1620 tcttcaactgctaccaccaatggtggtggtggcacatctaatatttataattataatcat 1679


Query: 1680 gaagatcaaacacttggtaatggtattcatacttttagagtatttgataaagttactgtt 1739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1680 gaagatcaaacacttggtaatggtattcatacttttagagtatttgataaagttactgtt 1739


Query: 1740 gaaatttatgttgatgatagtaaagctcatgatcaaaaattaaaaattaattgtataaat 1799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1740 gaaatttatgttgatgatagtaaagctcatgatcaaaaattaaaaattaattgtataaat 1799


Query: 1800 ccaaatatttcattcgtaccatctgatgatattgatagtaataatttagatgatatttta 1859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1800 ccaaatatttcattcgtaccatctgatgatattgatagtaataatttagatgatatttta 1859


Query: 1860 aatcaagaaaataatattaataaatcaacttcctctacctcatcttcaaataaatc 1915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1860 aatcaagaaaataatattaataaatcaacttcctctacctcatcttcaaataaatc 1915


>Contig-U14717-1 (Contig-U14717-1Q) /CSM_Contig/Contig-U14717-1Q.Seq.d
Length = 1199

Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus


Query: 1774 aaaaattaaaaattaattgtataaatccaaatat 1807
||||| |||||||||||||||| ||| |||||||
Sbjct: 89 aaaaaataaaaattaattgtattaatacaaatat 122


>Contig-U11140-1 (Contig-U11140-1Q) /CSM_Contig/Contig-U11140-1Q.Seq.d
Length = 2231

Score = 40.1 bits (20), Expect = 0.009
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 1772 tcaaaaattaaaaattaatt 1791
||||||||||||||||||||
Sbjct: 410 tcaaaaattaaaaattaatt 429


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 33,902
Number of Sequences: 6905
Number of extensions: 33902
Number of successful extensions: 4076
Number of sequences better than 10.0: 490
length of query: 2032
length of database: 5,674,871
effective HSP length: 16
effective length of query: 2016
effective length of database: 5,564,391
effective search space: 11217812256
effective search space used: 11217812256
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.23
Homology vs DNA
Query= Contig-U11233-1 (Contig-U11233-1Q) /CSM_Contig/Contig-U11233-1Q.Seq.d
(2032 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ439028) Dictyostelium discoideum cDNA clone:ddv39p05, 3' ... 1477 0.0 1
(BJ441830) Dictyostelium discoideum cDNA clone:ddv48b04, 3' ... 1461 0.0 1
(BJ356236) Dictyostelium discoideum cDNA clone:dda59n16, 3' ... 1241 0.0 1
(BJ349116) Dictyostelium discoideum cDNA clone:dda35n08, 3' ... 1237 0.0 1
(BJ436937) Dictyostelium discoideum cDNA clone:ddv32o13, 3' ... 1223 0.0 1
(BJ350204) Dictyostelium discoideum cDNA clone:dda39h01, 3' ... 1223 0.0 1
(BJ438506) Dictyostelium discoideum cDNA clone:ddv37j06, 3' ... 1219 0.0 1
(BJ423081) Dictyostelium discoideum cDNA clone:ddv48b04, 5' ... 1074 0.0 1
(BJ420413) Dictyostelium discoideum cDNA clone:ddv39p05, 5' ... 1074 0.0 1
(BJ332433) Dictyostelium discoideum cDNA clone:dda39h01, 5' ... 1074 0.0 1
(BJ337942) Dictyostelium discoideum cDNA clone:dda59c16, 5' ... 1066 0.0 2
(BJ419765) Dictyostelium discoideum cDNA clone:ddv37j06, 5' ... 1065 0.0 1
(BJ331455) Dictyostelium discoideum cDNA clone:dda35n08, 5' ... 1063 0.0 2
(BJ395847) Dictyostelium discoideum cDNA clone:dds40l10, 5' ... 1059 0.0 2
(BJ368848) Dictyostelium discoideum cDNA clone:ddc48f07, 5' ... 1047 0.0 2
(BJ418416) Dictyostelium discoideum cDNA clone:ddv32o13, 5' ... 1019 0.0 1
(CZ171224) MIAA-7L21c.b1 Meloidogyne incognita BAC end seque... 82 6e-11 2
(CZ177089) MIAA-20J22b.g1 Meloidogyne incognita BAC end sequ... 82 9e-11 1
(CP000001) Bacillus cereus E33L, complete genome. 72 9e-08 1
(DJ210601) Method for identification of useful proteins deri... 44 1e-06 3
(EX434605) GQ03916.B7_J05 GQ039 - Stem - Dormant Picea glauc... 68 1e-06 1
(DQ332565) Synthetic construct Saccharomyces cerevisiae clon... 44 5e-06 3
(EA397207) Sequence 46031 from patent US 7314974. 44 5e-06 3
(D76430) Saccharomyces cerevisiae for DIS3 protein, complete... 44 5e-06 3
(Z74763) S.cerevisiae chromosome XV reading frame ORF YOL021c. 44 1e-05 3
(DN610269) EST963319 Subtracted pine embryo library, Lib_B P... 48 1e-05 2
(DT627912) EST1156661 Subtracted pine embryo library, Lib_B ... 48 2e-05 2
(DR683139) EST1073215 Normalized pine embryo library, Lib_D ... 48 2e-05 2
(Z70718) Caenorhabditis elegans Cosmid C04G2. 64 2e-05 1
(CB403369) OSTR005H10_1 AD-wrmcDNA Caenorhabditis elegans cD... 64 2e-05 1
(BW991496) Chamaecyparis obtusa cDNA, clone: CO04345, 5' end... 64 2e-05 1
(AE017194) Bacillus cereus ATCC 10987, complete genome. 64 2e-05 1
(CB931685) ri61h04.y1 Meloidogyne chitwoodi J2 pDNR LIB Melo... 62 9e-05 1
(CU425491) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 58 2e-04 2
(CU425790) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 58 2e-04 2
(CU427587) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 58 2e-04 2
(CU430918) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 56 9e-04 2
(EB462679) AGENCOURT_74400601 NICHD_XGC_limb_m Xenopus laevi... 52 9e-04 2
(CU430353) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 56 0.001 2
(DQ048294) Pan troglodytes DIS3 gene, VIRTUAL TRANSCRIPT, pa... 40 0.001 3
(DQ048293) Homo sapiens DIS3 gene, VIRTUAL TRANSCRIPT, parti... 40 0.001 3
(ED462458) AUAC-aau55e02.b1 Ascaris suum whole genome shotgu... 58 0.001 1
(ED438809) AUAC-aan43b06.b1 Ascaris suum whole genome shotgu... 58 0.001 1
(ED413158) AUAC-aaw93d09.b1 Ascaris suum whole genome shotgu... 58 0.001 1
(ED299065) AUAC-aaj15a07.g1 Ascaris suum whole genome shotgu... 58 0.001 1
(CZ543488) SRAA-aad50c10.b1 Strongyloides ratti whole genome... 58 0.001 1
(FC820130) Sr_pAMT7_016m19_T7 S. ratti mixed stage pAMP Stro... 58 0.001 1
(AL080158) Homo sapiens mRNA; cDNA DKFZp434L194 (from clone ... 40 0.002 3
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome. 36 0.002 17
(AB385417) Synthetic construct DNA, clone: pF1KA1008, Homo s... 40 0.003 3
(AK314715) Homo sapiens cDNA, FLJ95573, Homo sapiens mitotic... 40 0.003 3
(BC084092) Xenopus laevis hypothetical LOC495005, mRNA (cDNA... 52 0.003 2
(AL832266) Homo sapiens mRNA; cDNA DKFZp667L1817 (from clone... 40 0.003 3
(EJ130715) 1092343485279 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.003 2
(AM398681) Flavobacterium psychrophilum JIP02/86 complete ge... 44 0.003 2
(AL929353) Plasmodium falciparum strain 3D7, chromosome 5, s... 34 0.004 16
(AB001743) Homo sapiens mRNA for DIS3, complete cds. 40 0.004 3
(BC038101) Homo sapiens DIS3 mitotic control homolog (S. cer... 40 0.004 3
(BC056143) Homo sapiens DIS3 mitotic control homolog (S. cer... 40 0.005 3
(EF410359) Synthetic construct Bacillus anthracis clone FLH2... 56 0.005 1
(FE708437) Pv055A_M13F_G01.ab1 Phaseolus vulgaris cv Early g... 56 0.005 1
(CP000903) Bacillus weihenstephanensis KBAB4, complete genome. 56 0.005 1
(CP000485) Bacillus thuringiensis str. Al Hakam, complete ge... 56 0.005 1
(AE017355) Bacillus thuringiensis serovar konkukian str. 97-... 56 0.005 1
(AE017334) Bacillus anthracis str. 'Ames Ancestor', complete... 56 0.005 1
(AE017225) Bacillus anthracis str. Sterne, complete genome. 56 0.005 1
(AE016879) Bacillus anthracis str. Ames, complete genome. 56 0.005 1
(AE016877) Bacillus cereus ATCC 14579, complete genome. 56 0.005 1
(AC115581) Dictyostelium discoideum chromosome 2 map complem... 48 0.006 8
(CQ725010) Sequence 10944 from Patent WO02068579. 40 0.008 3
(AB023225) Homo sapiens mRNA for KIAA1008 protein, partial cds. 40 0.008 3
(CQ412899) Sequence 19970 from Patent WO0170979. 40 0.008 3
(BW291002) Ciona intestinalis cDNA, clone:cigd043b10, 5' end... 54 0.009 2
(BW268518) Ciona intestinalis cDNA, clone:cign050d01, 5' end... 54 0.010 2
(BW265796) Ciona intestinalis cDNA, clone:cign041o04, 5' end... 54 0.010 2
(AC113401) Homo sapiens chromosome 5 clone RP11-454E20, comp... 34 0.011 9
(BW486574) Ciona intestinalis cDNA, clone:cima005d19, 5'end,... 54 0.013 2
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 34 0.015 16
(CS044394) Sequence 4948 from Patent WO2005019258. 40 0.015 3
(CS035442) Sequence 4948 from Patent WO2005016962. 40 0.015 3
(AF330044) Homo sapiens KIAA1008 protein mRNA, complete cds. 40 0.015 3
(AY691418) Paracoccus nothofagicola cytochrome b (cytb) gene... 40 0.016 5
(EA380584) Sequence 29407 from patent US 7314974. 54 0.021 1
(U23514) Caenorhabditis elegans cosmid F48E8, complete seque... 54 0.021 1
(EK482725) 1095469529511 Global-Ocean-Sampling_GS-32-01-01-1... 54 0.021 1
(EC024225) 4007835 KZ41 Caenorhabditis elegans cDNA clone 17... 54 0.021 1
(C71372) Caenorhabditis elegans cDNA clone yk444d2 : 5' end,... 54 0.021 1
(C68843) Caenorhabditis elegans cDNA clone yk309h10 : 5' end... 54 0.021 1
(C65782) Caenorhabditis elegans cDNA clone yk395c2 : 5' end,... 54 0.021 1
(BW190487) Ciona intestinalis cDNA, clone:ciad090m03, 5' end... 54 0.021 1
(BJ775216) Caenorhabditis elegans cDNA clone:yk1362d05 : 3' ... 54 0.021 1
(CR936503) Lactobacillus sakei strain 23K complete genome. 54 0.021 1
(DX349312) OR_ABa0280G14.r OR_ABa Oryza ridleyi genomic clon... 48 0.038 2
(AE015927) Clostridium tetani E88, complete genome. 36 0.039 22
(BU383434) 603860350F1 CSEQCHN75 Gallus gallus cDNA clone Ch... 42 0.040 2
(BU233332) 603411872F1 CSEQCHN24 Gallus gallus cDNA clone Ch... 42 0.040 2
(BU359530) 603477433F1 CSEQCHN71 Gallus gallus cDNA clone Ch... 42 0.042 2
(EH631745) EST2852 LK04 Laupala kohalensis cDNA clone 106102... 48 0.047 2
(CP000361) Arcobacter butzleri RM4018, complete genome. 36 0.050 23
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 38 0.073 19

>(BJ439028) Dictyostelium discoideum cDNA clone:ddv39p05, 3' end,
single read.
Length = 745

Score = 1477 bits (745), Expect = 0.0
Identities = 745/745 (100%)
Strand = Plus / Minus


Query: 675 attaatcaacacactggtgaaatcattgcagtcgaatatactaaaagtataattcgttca 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 attaatcaacacactggtgaaatcattgcagtcgaatatactaaaagtataattcgttca 686


Query: 735 tgtgcatctctaacctatgaacaagcacaaattagaattgatgataaatctcaaaatgat 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgtgcatctctaacctatgaacaagcacaaattagaattgatgataaatctcaaaatgat 626


Query: 795 caaatcacagtaaatcttagaaatttaaatagtttagcaaaaattcttagaaaacaacgt 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 caaatcacagtaaatcttagaaatttaaatagtttagcaaaaattcttagaaaacaacgt 566


Query: 855 ttcgataggggtgcactctatttagcttcaccacaagttaaattcaagactgaagaattg 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttcgataggggtgcactctatttagcttcaccacaagttaaattcaagactgaagaattg 506


Query: 915 ggtggtgatccatccgatgttgaaatttatcaacttcgtgaaacaaattcaatgattgaa 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggtggtgatccatccgatgttgaaatttatcaacttcgtgaaacaaattcaatgattgaa 446


Query: 975 gagtttatgttgttagcaaatatttgggttgccaagaaaatttataaacatttcccaggt 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gagtttatgttgttagcaaatatttgggttgccaagaaaatttataaacatttcccaggt 386


Query: 1035 tgtgctatgttacgtcgtcatccaactccaaataaagcagctttcgatttattgacaaag 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgtgctatgttacgtcgtcatccaactccaaataaagcagctttcgatttattgacaaag 326


Query: 1095 ttaatcgagaataaaggttacaaattctcaaccaccacaagtaaagatttagcagattca 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttaatcgagaataaaggttacaaattctcaaccaccacaagtaaagatttagcagattca 266


Query: 1155 ttggattccgctgtagataagaacgattcatactttaataccctatgtcgtattatgaca 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttggattccgctgtagataagaacgattcatactttaataccctatgtcgtattatgaca 206


Query: 1215 acccgttgcatgtcaccagctaaatatttctcatcaggttcattaccatatgaagatttt 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 acccgttgcatgtcaccagctaaatatttctcatcaggttcattaccatatgaagatttt 146


Query: 1275 aatcattatggtttggccactgatatttacactcatttcacatcaccaattcgtcgttat 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 aatcattatggtttggccactgatatttacactcatttcacatcaccaattcgtcgttat 86


Query: 1335 ccagatattatagttcatcgtttattagcttctgcaattggtattcaatcagtttcatta 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 ccagatattatagttcatcgtttattagcttctgcaattggtattcaatcagtttcatta 26


Query: 1395 aatttagagaataaaaccatttcag 1419
|||||||||||||||||||||||||
Sbjct: 25 aatttagagaataaaaccatttcag 1

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,323,806,744
Number of extensions: 146651651
Number of successful extensions: 12478715
Number of sequences better than 10.0: 414
Length of query: 2032
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 2008
Effective length of database: 97,308,875,965
Effective search space: 195396222937720
Effective search space used: 195396222937720
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 6.29
Homology vs Protein
Query= Contig-U11233-1 (Contig-U11233-1Q) /CSM_Contig/Contig-U11233-1Q.Seq.d
(2032 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q9CSH3) RecName: Full=Exosome complex exonuclease RRP44; ... 338 3e-91
AL138695_5(AL138695|pid:none) Human DNA sequence from clone RP11... 337 1e-90
AF330044_1(AF330044|pid:none) Homo sapiens KIAA1008 protein mRNA... 337 1e-90
AL080158_1(AL080158|pid:none) Homo sapiens mRNA; cDNA DKFZp434L1... 337 1e-90
BC056143_1(BC056143|pid:none) Homo sapiens DIS3 mitotic control ... 337 1e-90
BC038101_1(BC038101|pid:none) Homo sapiens DIS3 mitotic control ... 337 1e-90
AE014297_3670(AE014297|pid:none) Drosophila melanogaster chromos... 335 4e-90
AY052150_1(AY052150|pid:none) Drosophila melanogaster SD10981 fu... 335 4e-90
AL832266_1(AL832266|pid:none) Homo sapiens mRNA; cDNA DKFZp667L1... 333 1e-89
BC161523_1(BC161523|pid:none) Xenopus tropicalis DIS3 mitotic co... 328 3e-88
AC099739_6(AC099739|pid:none) Oryza sativa (japonica cultivar-gr... 324 7e-87
BT061562_1(BT061562|pid:none) Zea mays full-length cDNA clone ZM... 323 1e-86
CR954211_343(CR954211|pid:none) Ostreococcus tauri strain OTTH05... 319 3e-85
CR380954_184(CR380954|pid:none) Candida glabrata strain CBS138 c... 310 1e-82
CP000591_320(CP000591|pid:none) Ostreococcus lucimarinus CCE9901... 308 4e-82
AC007584_6(AC007584|pid:none) Arabidopsis thaliana chromosome 2 ... 304 9e-81
FN392321_1071(FN392321|pid:none) Pichia pastoris GS115 chromosom... 298 4e-79
FM992688_1140(FM992688|pid:none) Candida dubliniensis CD36 chrom... 297 1e-78
CU928179_40(CU928179|pid:none) Zygosaccharomyces rouxii strain C... 296 2e-78
CU928180_555(CU928180|pid:none) Kluyveromyces thermotolerans str... 295 6e-78
AP000615_11(AP000615|pid:none) Oryza sativa Japonica Group genom... 293 2e-77
CR382139_417(CR382139|pid:none) Debaryomyces hansenii strain CBS... 287 9e-76
(Q17632) RecName: Full=Probable exosome complex exonuclease RRP4... 275 6e-72
AM494965_34(AM494965|pid:none) Leishmania braziliensis chromosom... 252 4e-65
AJ308998_1(AJ308998|pid:none) Trypanosoma brucei RRP44 gene for ... 246 2e-63
CR940347_726(CR940347|pid:none) Theileria annulata strain Ankara... 239 3e-61
BC126555_1(BC126555|pid:none) Bos taurus DIS3 mitotic control ho... 220 1e-55
(A0JN80) RecName: Full=DIS3-like exonuclease 1; EC=3.1.... 220 1e-55
(A2RV18) RecName: Full=DIS3-like exonuclease 1; EC=3.1.... 214 7e-54
(Q8TF46) RecName: Full=DIS3-like exonuclease 1; EC=3.1.... 207 2e-51
BC022089_1(BC022089|pid:none) Homo sapiens DIS3 mitotic control ... 207 2e-51
(Q6GN11) RecName: Full=DIS3-like exonuclease 1; EC=3.1.... 206 3e-51
BC073711_1(BC073711|pid:none) Xenopus laevis MGC83653 protein, m... 206 3e-51
(Q0P4R5) RecName: Full=DIS3-like exonuclease 1; EC=3.1.... 201 8e-50
AF496668_1(AF496668|pid:none) Trypanosoma cruzi Rrp44p-like prot... 185 6e-45
(Q0V9R3) RecName: Full=DIS3-like exonuclease 2; EC=3.1.... 177 1e-42
AX015910_1(AX015910|pid:none) Sequence 13 from Patent WO9950284. 173 2e-41
(Q8CI75) RecName: Full=DIS3-like exonuclease 2; EC=3.1.... 171 7e-41
(Q8IYB7) RecName: Full=DIS3-like exonuclease 2; EC=3.1.... 171 1e-40
AL844509_577(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 170 2e-40
BT047459_1(BT047459|pid:none) Salmo salar clone ssal-eve-506-161... 170 2e-40
AM910993_115(AM910993|pid:none) Plasmodium knowlesi strain H chr... 170 2e-40
T18925(T18925)hypothetical protein C04G2.6 - Caenorhabditis eleg... 163 2e-38
(Q09568) RecName: Full=Uncharacterized ribonuclease F48E8.6; ... 162 6e-38
AL138695_6(AL138695|pid:none) Human DNA sequence from clone RP11... 158 6e-37
BC027357_1(BC027357|pid:none) Mus musculus DIS3 mitotic control ... 157 1e-36
AK012840_1(AK012840|pid:none) Mus musculus 10, 11 days embryo wh... 156 2e-36
AE017347_244(AE017347|pid:none) Cryptococcus neoformans var. neo... 156 2e-36
AK029652_1(AK029652|pid:none) Mus musculus adult male testis cDN... 155 4e-36
BC104534_1(BC104534|pid:none) Bos taurus DIS3 mitotic control ho... 155 4e-36
CP000593_78(CP000593|pid:none) Ostreococcus lucimarinus CCE9901 ... 155 5e-36
(O14040) RecName: Full=Dis3-like exonuclease C2C4.07c; ... 154 1e-35
CR954215_45(CR954215|pid:none) Ostreococcus tauri strain OTTH059... 150 2e-34
AL590443_69(AL590443|pid:none) chromosome III of strain GB-M1 of... 150 2e-34
BT015237_1(BT015237|pid:none) Drosophila melanogaster RE03681 fu... 147 1e-33
CP001326_20(CP001326|pid:none) Micromonas sp. RCC299 chromosome ... 142 4e-32
AC012193_1(AC012193|pid:none) Arabidopsis thaliana chromosome 1 ... 139 5e-31
AY811539_1(AY811539|pid:none) Schistosoma japonicum SJCHGC07896 ... 137 2e-30
AP005012_8(AP005012|pid:none) Oryza sativa Japonica Group genomi... 130 2e-28
AX015899_1(AX015899|pid:none) Sequence 1 from Patent WO9950284. 128 9e-28
FN357307_53(FN357307|pid:none) Schistosoma mansoni genome sequen... 127 2e-27
FN357307_54(FN357307|pid:none) Schistosoma mansoni genome sequen... 127 2e-27
AJ309002_1(AJ309002|pid:none) Trypanosoma brucei ORF1 gene for p... 126 3e-27
AM494965_46(AM494965|pid:none) Leishmania braziliensis chromosom... 126 3e-27
AE015924_1470(AE015924|pid:none) Porphyromonas gingivalis W83, c... 125 4e-27
AE015928_3076(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 125 8e-27
AP006841_4558(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 124 1e-26
AP009380_396(AP009380|pid:none) Porphyromonas gingivalis ATCC 33... 124 1e-26
CP001229_661(CP001229|pid:none) Sulfurihydrogenibium azorense Az... 123 2e-26
CP000607_567(CP000607|pid:none) Chlorobium phaeovibrioides DSM 2... 120 2e-25
CP000096_513(CP000096|pid:none) Pelodictyon luteolum DSM 273, co... 118 7e-25
CP000140_3253(CP000140|pid:none) Parabacteroides distasonis ATCC... 117 1e-24
CP001357_652(CP001357|pid:none) Brachyspira hyodysenteriae WA1, ... 117 1e-24
CP001100_2604(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 115 5e-24
CP001099_1357(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 114 1e-23
AB245428_1(AB245428|pid:none) Colletotrichum lagenarium ClaSSD1 ... 114 1e-23
AP010656_203(AP010656|pid:none) Candidatus Azobacteroides pseudo... 114 1e-23
AM502246_30(AM502246|pid:none) Leishmania infantum chromosome 28. 114 1e-23
AM502250_31(AM502250|pid:none) Leishmania infantum chromosome 32. 114 1e-23
CP000721_630(CP000721|pid:none) Clostridium beijerinckii NCIMB 8... 114 2e-23
CT005266_45(CT005266|pid:none) Leishmania major strain Friedlin,... 113 2e-23
CP000698_2655(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 113 3e-23
AP007169_229(AP007169|pid:none) Aspergillus oryzae RIB40 genomic... 113 3e-23
BA000028_2428(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 112 7e-23
CP000724_3451(CP000724|pid:none) Alkaliphilus metalliredigens QY... 112 7e-23
AE009951_1184(AE009951|pid:none) Fusobacterium nucleatum subsp. ... 112 7e-23
CP001110_1774(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 111 9e-23
AY118498_1(AY118498|pid:none) Drosophila melanogaster LD08354 fu... 110 3e-22
CP001108_650(CP001108|pid:none) Prosthecochloris aestuarii DSM 2... 109 3e-22
AK090419_1(AK090419|pid:none) Homo sapiens mRNA for FLJ00327 pro... 109 4e-22
AM270165_115(AM270165|pid:none) Aspergillus niger contig An08c01... 109 4e-22
A96988(A96988) FUSION ribonuclease and ribosomal protein S1 doma... 108 6e-22
CP000159_1492(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 108 6e-22
CP000813_2985(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 108 1e-21
CP000679_1258(CP000679|pid:none) Caldicellulosiruptor saccharoly... 108 1e-21
CP000764_3494(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 108 1e-21
CU640366_629(CU640366|pid:none) Podospora anserina genomic DNA c... 107 1e-21
AY552545_56(AY552545|pid:none) Uncultured marine gamma proteobac... 107 1e-21
AL670011_20(AL670011|pid:none) Neurospora crassa DNA linkage gro... 107 1e-21
CP000141_289(CP000141|pid:none) Carboxydothermus hydrogenoforman... 107 1e-21
CP000803_475(CP000803|pid:none) Francisella tularensis subsp. ho... 107 2e-21
AM233362_556(AM233362|pid:none) Francisella tularensis subsp. ho... 107 2e-21
AM180355_3246(AM180355|pid:none) Clostridium difficile 630 compl... 106 3e-21
CP001390_3356(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 106 3e-21
CP001130_1013(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, c... 106 4e-21
CU207366_3263(CU207366|pid:none) Gramella forsetii KT0803 comple... 106 4e-21
CP000915_277(CP000915|pid:none) Francisella tularensis subsp. me... 105 5e-21
AJ749949_1553(AJ749949|pid:none) Francisella tularensis subsp. t... 105 5e-21
CP001407_5018(CP001407|pid:none) Bacillus cereus 03BB102, comple... 105 6e-21
CP000937_1215(CP000937|pid:none) Francisella philomiragia subsp.... 105 6e-21
BA000043_3044(BA000043|pid:none) Geobacillus kaustophilus HTA426... 105 6e-21
AE017180_1474(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 105 8e-21
CP001056_2972(CP001056|pid:none) Clostridium botulinum B str. Ek... 105 8e-21
CP001078_2716(CP001078|pid:none) Clostridium botulinum E3 str. A... 104 1e-20
AE017333_3471(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 104 1e-20
CP001022_2342(CP001022|pid:none) Exiguobacterium sibiricum 255-1... 104 1e-20
AE017355_4757(AE017355|pid:none) Bacillus thuringiensis serovar ... 104 1e-20
CP000557_2956(CP000557|pid:none) Geobacillus thermodenitrificans... 103 2e-20
CP000922_2469(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 103 2e-20
CP001089_1226(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 103 2e-20
AE017194_5197(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 103 2e-20
CP001101_728(CP001101|pid:none) Chlorobium phaeobacteroides BS1,... 103 2e-20
EF089400_7(EF089400|pid:none) Uncultured marine bacterium EB0_41... 103 3e-20
CU928171_255(CU928171|pid:none) Kluyveromyces thermotolerans str... 102 4e-20
CP000903_4800(CP000903|pid:none) Bacillus weihenstephanensis KBA... 102 4e-20
CP000482_1153(CP000482|pid:none) Pelobacter propionicus DSM 2379... 102 5e-20
CP000422_448(CP000422|pid:none) Pediococcus pentosaceus ATCC 257... 102 7e-20
AK295363_1(AK295363|pid:none) Homo sapiens cDNA FLJ60550 complet... 101 1e-19
CP001357_2283(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 100 2e-19
CP000148_1370(CP000148|pid:none) Geobacter metallireducens GS-15... 100 2e-19
AP008955_5224(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 100 3e-19
CP000860_318(CP000860|pid:none) Candidatus Desulforudis audaxvia... 100 3e-19
CP001107_1481(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 100 3e-19
CP000920_898(CP000920|pid:none) Streptococcus pneumoniae P1031, ... 99 4e-19
CP001348_2200(CP001348|pid:none) Clostridium cellulolyticum H10,... 99 6e-19
CP000109_1489(CP000109|pid:none) Thiomicrospira crunogena XCL-2,... 99 6e-19
AM412317_230(AM412317|pid:none) Clostridium botulinum A str. ATC... 99 8e-19
AP008934_1907(AP008934|pid:none) Staphylococcus saprophyticus su... 98 1e-18
CR382123_455(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 98 1e-18
CP000513_571(CP000513|pid:none) Dichelobacter nodosus VCS1703A, ... 98 1e-18
CP000924_1335(CP000924|pid:none) Thermoanaerobacter pseudethanol... 98 1e-18
CP001615_846(CP001615|pid:none) Exiguobacterium sp. AT1b, comple... 98 1e-18
AF012898_1(AF012898|pid:none) Candida albicans protein phosphata... 98 1e-18
CP000885_2835(CP000885|pid:none) Clostridium phytofermentans ISD... 98 1e-18
CP000448_269(CP000448|pid:none) Syntrophomonas wolfei subsp. wol... 97 2e-18
CP000728_226(CP000728|pid:none) Clostridium botulinum F str. Lan... 97 2e-18
CP000713_2217(CP000713|pid:none) Psychrobacter sp. PRwf-1, compl... 97 2e-18
AM180252_593(AM180252|pid:none) Lawsonia intracellularis PHE/MN1... 97 2e-18
CP001033_950(CP001033|pid:none) Streptococcus pneumoniae CGSP14,... 97 3e-18
AE005672_917(AE005672|pid:none) Streptococcus pneumoniae TIGR4, ... 97 3e-18
FM211187_858(FM211187|pid:none) Streptococcus pneumoniae ATCC 70... 97 3e-18
CP000725_698(CP000725|pid:none) Streptococcus gordonii str. Chal... 97 3e-18
CP000919_868(CP000919|pid:none) Streptococcus pneumoniae JJA, co... 97 3e-18
AP008971_652(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 97 3e-18
CP001015_888(CP001015|pid:none) Streptococcus pneumoniae G54, co... 96 4e-18
BX908798_1048(BX908798|pid:none) Parachlamydia-related symbiont ... 96 4e-18
CP001114_349(CP001114|pid:none) Deinococcus deserti VCD115, comp... 96 5e-18
AE017198_718(AE017198|pid:none) Lactobacillus johnsonii NCC 533,... 96 5e-18
CR380954_49(CR380954|pid:none) Candida glabrata strain CBS138 ch... 96 6e-18
CP001175_146(CP001175|pid:none) Listeria monocytogenes HCC23, co... 96 6e-18
AB1750(AB1750) exoribonuclease RNase-R homolog lin2543 [imported... 96 6e-18
CP001020_847(CP001020|pid:none) Coxiella burnetii CbuK_Q154, com... 96 6e-18
CP001098_1559(CP001098|pid:none) Halothermothrix orenii H 168, c... 96 6e-18
CP000112_2593(CP000112|pid:none) Desulfovibrio desulfuricans G20... 96 6e-18
CP000890_1067(CP000890|pid:none) Coxiella burnetii RSA 331, comp... 96 6e-18
AE016828_943(AE016828|pid:none) Coxiella burnetii RSA 493, compl... 96 6e-18
AE017262_2398(AE017262|pid:none) Listeria monocytogenes str. 4b ... 96 6e-18
AI1380(AI1380) exoribonuclease RNase-R homolog lmo2449 [imported... 95 8e-18
CP000783_181(CP000783|pid:none) Enterobacter sakazakii ATCC BAA-... 95 1e-17
AE014133_1456(AE014133|pid:none) Streptococcus mutans UA159, com... 95 1e-17
CP000387_1521(CP000387|pid:none) Streptococcus sanguinis SK36, c... 95 1e-17
CP001034_1978(CP001034|pid:none) Natranaerobius thermophilus JW/... 94 1e-17
AJ564267_1(AJ564267|pid:none) Staphylococcus aureus rnr gene for... 94 1e-17
AE017221_554(AE017221|pid:none) Thermus thermophilus HB27, compl... 94 1e-17
AP008226_910(AP008226|pid:none) Thermus thermophilus HB8 genomic... 94 1e-17
CR382139_868(CR382139|pid:none) Debaryomyces hansenii strain CBS... 94 2e-17
AM295250_431(AM295250|pid:none) Staphylococcus carnosus subsp. c... 94 2e-17
CP001016_3314(CP001016|pid:none) Beijerinckia indica subsp. indi... 94 2e-17
AE008691_921(AE008691|pid:none) Thermoanaerobacter tengcongensis... 94 2e-17
FM177140_1092(FM177140|pid:none) Lactobacillus casei BL23 comple... 94 2e-17
CP000490_21(CP000490|pid:none) Paracoccus denitrificans PD1222 c... 94 2e-17
AP006627_2995(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 94 2e-17
CP000936_986(CP000936|pid:none) Streptococcus pneumoniae Hungary... 94 2e-17
FM204883_1522(FM204883|pid:none) Streptococcus equi subsp. equi ... 94 2e-17
AP009351_754(AP009351|pid:none) Staphylococcus aureus subsp. aur... 94 2e-17
CR936503_1409(CR936503|pid:none) Lactobacillus sakei strain 23K ... 93 3e-17
CP000514_2356(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 93 4e-17
CP000830_15(CP000830|pid:none) Dinoroseobacter shibae DFL 12, co... 92 5e-17
CR382132_572(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 92 5e-17
AJ564286_1(AJ564286|pid:none) Staphylococcus aureus rnr gene for... 92 5e-17
AM263198_2397(AM263198|pid:none) Listeria welshimeri serovar 6b ... 92 5e-17
CP000961_4172(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 92 5e-17
CP000142_2299(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 92 7e-17
CP000916_1862(CP000916|pid:none) Thermotoga neapolitana DSM 4359... 92 7e-17
AM743169_1450(AM743169|pid:none) Stenotrophomonas maltophilia K2... 92 7e-17
CP000472_674(CP000472|pid:none) Shewanella piezotolerans WP3, co... 92 9e-17
CR954246_2902(CR954246|pid:none) Pseudoalteromonas haloplanktis ... 92 9e-17
CP000285_878(CP000285|pid:none) Chromohalobacter salexigens DSM ... 92 9e-17
AJ938182_736(AJ938182|pid:none) Staphylococcus aureus RF122 comp... 92 9e-17
CP000381_1031(CP000381|pid:none) Neisseria meningitidis 053442, ... 91 1e-16
CP001154_2553(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 91 1e-16
CP000879_946(CP000879|pid:none) Petrotoga mobilis SJ95, complete... 91 1e-16
CP000388_987(CP000388|pid:none) Pseudoalteromonas atlantica T6c,... 91 1e-16
CP001050_1010(CP001050|pid:none) Neisseria gonorrhoeae NCCP11945... 91 1e-16
CP000033_431(CP000033|pid:none) Lactobacillus acidophilus NCFM, ... 91 1e-16
CP001150_2522(CP001150|pid:none) Rhodobacter sphaeroides KD131 c... 91 2e-16
CP000143_2742(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c... 91 2e-16
CP000851_3574(CP000851|pid:none) Shewanella pealeana ATCC 700345... 91 2e-16
CP000896_382(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 91 2e-16
(Q98QL0) RecName: Full=Ribonuclease R; Short=RNase R; ... 91 2e-16
CU179680_209(CU179680|pid:none) Mycoplasma agalactiae PG2 chromo... 91 2e-16
EU890828_1(EU890828|pid:none) Escherichia coli strain TB182A put... 90 3e-16
CP000356_1220(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 90 3e-16
AP007281_389(AP007281|pid:none) Lactobacillus reuteri JCM 1112 D... 90 3e-16
CP000633_1293(CP000633|pid:none) Agrobacterium vitis S4 chromoso... 90 3e-16
CP000680_636(CP000680|pid:none) Pseudomonas mendocina ymp, compl... 90 3e-16
BA000031_1890(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22... 90 3e-16
AL954747_350(AL954747|pid:none) Nitrosomonas europaea ATCC 19718... 90 4e-16
CP000774_2814(CP000774|pid:none) Parvibaculum lavamentivorans DS... 90 4e-16
CP001071_900(CP001071|pid:none) Akkermansia muciniphila ATCC BAA... 90 4e-16
CP000931_3643(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 90 4e-16
AM946015_512(AM946015|pid:none) Streptococcus uberis 0140J compl... 89 5e-16
AM902716_2718(AM902716|pid:none) Bordetella petrii strain DSM 12... 89 5e-16
AE014075_5154(AE014075|pid:none) Escherichia coli CFT073, comple... 89 5e-16
CP000266_4023(CP000266|pid:none) Shigella flexneri 5 str. 8401, ... 89 5e-16
CP000034_4062(CP000034|pid:none) Shigella dysenteriae Sd197, com... 89 5e-16
AP009240_4476(AP009240|pid:none) Escherichia coli SE11 DNA, comp... 89 5e-16
AM884176_649(AM884176|pid:none) Chlamydia trachomatis strain L2/... 89 5e-16
S56404(S56404;C31965;F65228) virulence-associated protein vacB h... 89 5e-16
CP000247_4375(CP000247|pid:none) Escherichia coli 536, complete ... 89 5e-16
AE015451_4814(AE015451|pid:none) Pseudomonas putida KT2440 compl... 89 6e-16
CP000038_4051(CP000038|pid:none) Shigella sonnei Ss046, complete... 89 6e-16
AE017243_33(AE017243|pid:none) Mycoplasma hyopneumoniae J, compl... 89 6e-16
CP000036_3968(CP000036|pid:none) Shigella boydii Sb227, complete... 89 6e-16
AM285303_16(AM285303|pid:none) Spiroplasma citri GII3-3X chromos... 89 6e-16
CP000716_1476(CP000716|pid:none) Thermosipho melanesiensis BI429... 89 6e-16
AE015929_565(AE015929|pid:none) Staphylococcus epidermidis ATCC ... 89 6e-16
CP000926_4904(CP000926|pid:none) Pseudomonas putida GB-1, comple... 89 6e-16
CP000057_906(CP000057|pid:none) Haemophilus influenzae 86-028NP,... 89 8e-16
AE017332_38(AE017332|pid:none) Mycoplasma hyopneumoniae 232, com... 88 1e-15
BX640430_239(BX640430|pid:none) Bordetella parapertussis strain ... 88 1e-15
BX640421_259(BX640421|pid:none) Bordetella pertussis strain Toha... 88 1e-15
(Q9WZI1) RecName: Full=Ribonuclease R; Short=RNase R; ... 88 1e-15
AX015901_1(AX015901|pid:none) Sequence 3 from Patent WO9950284. 88 1e-15
AP006716_2105(AP006716|pid:none) Staphylococcus haemolyticus JCS... 88 1e-15
AE017244_38(AE017244|pid:none) Mycoplasma hyopneumoniae 7448, co... 88 1e-15
AE016814_115(AE016814|pid:none) Ashbya gossypii (= Eremothecium ... 88 1e-15
CU459141_427(CU459141|pid:none) Acinetobacter baumannii str. AYE... 88 1e-15
CP000113_4099(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 88 1e-15
CP000521_3340(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 88 1e-15
CP000771_175(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 88 1e-15
CU468230_429(CU468230|pid:none) Acinetobacter baumannii str. SDF... 88 1e-15
AE004439_1954(AE004439|pid:none) Pasteurella multocida subsp. mu... 88 1e-15
AE014299_3823(AE014299|pid:none) Shewanella oneidensis MR-1, com... 88 1e-15
CP001127_4300(CP001127|pid:none) Salmonella enterica subsp. ente... 87 2e-15
AE017220_4244(AE017220|pid:none) Salmonella enterica subsp. ente... 87 2e-15
CP000158_2241(CP000158|pid:none) Hyphomonas neptunium ATCC 15444... 87 2e-15
CP001185_1733(CP001185|pid:none) Thermosipho africanus TCF52B, c... 87 2e-15
AM406671_1288(AM406671|pid:none) Lactococcus lactis subsp. cremo... 87 2e-15
CP000029_443(CP000029|pid:none) Staphylococcus epidermidis RP62A... 87 2e-15
CP001157_740(CP001157|pid:none) Azotobacter vinelandii DJ, compl... 87 2e-15
FM872307_406(FM872307|pid:none) Chlamydia trachomatis B/TZ1A828/... 87 2e-15
(O84402) RecName: Full=Ribonuclease R; Short=RNase R; ... 87 2e-15
CP000051_417(CP000051|pid:none) Chlamydia trachomatis A/HAR-13, ... 87 2e-15
D11024_2(D11024|pid:none) Shigella flexneri vacB gene. 87 2e-15
BX294147_221(BX294147|pid:none) Rhodopirellula baltica SH 1 comp... 87 3e-15
CP000473_5179(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 87 3e-15
CP000949_4644(CP000949|pid:none) Pseudomonas putida W619, comple... 87 3e-15
CP000083_4482(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 87 3e-15
CU928179_698(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 87 3e-15
CP001013_2844(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 86 4e-15
CP000264_356(CP000264|pid:none) Jannaschia sp. CCS1, complete ge... 86 4e-15
CP000260_415(CP000260|pid:none) Streptococcus pyogenes MGAS10270... 86 4e-15
AP009385_1527(AP009385|pid:none) Burkholderia multivorans ATCC 1... 86 4e-15
CP000425_916(CP000425|pid:none) Lactococcus lactis subsp. cremor... 86 4e-15
CP000702_207(CP000702|pid:none) Thermotoga petrophila RKU-1, com... 86 4e-15
CP000362_170(CP000362|pid:none) Roseobacter denitrificans OCh 11... 86 4e-15
CP000438_5250(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 86 5e-15
CR848038_234(CR848038|pid:none) Chlamydophila abortus strain S26... 86 5e-15
AE004092_358(AE004092|pid:none) Streptococcus pyogenes M1 GAS, c... 86 5e-15
CP000407_1383(CP000407|pid:none) Streptococcus suis 05ZYH33, com... 86 5e-15
CP000031_3253(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 86 5e-15
AM167904_2121(AM167904|pid:none) Bordetella avium 197N complete ... 86 5e-15
AE004091_4933(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 86 5e-15
FM209186_5323(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 86 5e-15
CP000672_1286(CP000672|pid:none) Haemophilus influenzae PittGG, ... 86 5e-15
CP000507_3057(CP000507|pid:none) Shewanella amazonensis SB2B, co... 86 5e-15
CU466930_864(CU466930|pid:none) Candidatus Cloacamonas acidamino... 86 5e-15
CP000017_413(CP000017|pid:none) Streptococcus pyogenes MGAS5005,... 86 5e-15
CP000446_3250(CP000446|pid:none) Shewanella sp. MR-4, complete g... 86 7e-15
CP000259_413(CP000259|pid:none) Streptococcus pyogenes MGAS9429,... 86 7e-15
BA000034_1501(BA000034|pid:none) Streptococcus pyogenes SSI-1 DN... 86 7e-15
AL646052_1229(AL646052|pid:none) Ralstonia solanacearum GMI1000 ... 86 7e-15
CP000262_427(CP000262|pid:none) Streptococcus pyogenes MGAS10750... 86 7e-15
CP000822_3553(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 86 7e-15
CP000444_679(CP000444|pid:none) Shewanella sp. MR-7, complete ge... 86 7e-15
AE009949_420(AE009949|pid:none) Streptococcus pyogenes MGAS8232,... 86 7e-15
AY728030_1(AY728030|pid:none) Herminiimonas arsenicoxydans clone... 86 7e-15
AM295007_1433(AM295007|pid:none) Streptococcus pyogenes Manfredo... 86 7e-15
CP000769_1434(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 86 7e-15
CP000076_567(CP000076|pid:none) Pseudomonas fluorescens Pf-5, co... 86 7e-15
AL766851_87(AL766851|pid:none) Streptococcus agalactiae NEM316 c... 85 9e-15
AE016827_473(AE016827|pid:none) Mannheimia succiniciproducens MB... 85 9e-15
AE017340_1931(AE017340|pid:none) Idiomarina loihiensis L2TR, com... 85 9e-15
(Q02146) RecName: Full=Ribonuclease R 2; Short=RNase R ... 85 9e-15
CP000284_1623(CP000284|pid:none) Methylobacillus flagellatus KT,... 85 9e-15
CP000425_1227(CP000425|pid:none) Lactococcus lactis subsp. cremo... 85 9e-15
CP000744_5589(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 85 1e-14
CP000157_1223(CP000157|pid:none) Erythrobacter litoralis HTCC259... 85 1e-14
CP000411_1295(CP000411|pid:none) Oenococcus oeni PSU-1, complete... 85 1e-14
AE015925_238(AE015925|pid:none) Chlamydophila caviae GPIC, compl... 85 1e-14
CP000687_1449(CP000687|pid:none) Actinobacillus pleuropneumoniae... 85 1e-14
CP000304_3576(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 85 1e-14
CP000075_579(CP000075|pid:none) Pseudomonas syringae pv. syringa... 85 1e-14
CP000359_457(CP000359|pid:none) Deinococcus geothermalis DSM 113... 85 1e-14
CP000453_575(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-1... 84 1e-14
AE013598_2041(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 84 1e-14
CP000316_2649(CP000316|pid:none) Polaromonas sp. JS666, complete... 84 2e-14
DQ490056_16(DQ490056|pid:none) Lactococcus phage Q54, complete g... 84 2e-14
CP001191_1285(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 84 2e-14
CP000447_3329(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 84 2e-14
AE008922_1493(AE008922|pid:none) Xanthomonas campestris pv. camp... 84 3e-14
AE008923_1543(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 84 3e-14
CP000503_3385(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 84 3e-14
CP000116_608(CP000116|pid:none) Thiobacillus denitrificans ATCC ... 84 3e-14
CP000082_2101(CP000082|pid:none) Psychrobacter arcticus 273-4, c... 84 3e-14
CP000449_1277(CP000449|pid:none) Maricaulis maris MCS10, complet... 84 3e-14
AM406671_1552(AM406671|pid:none) Lactococcus lactis subsp. cremo... 83 3e-14
CP000488_480(CP000488|pid:none) Candidatus Ruthia magnifica str.... 83 3e-14
CP000891_733(CP000891|pid:none) Shewanella baltica OS195, comple... 83 3e-14
AM286415_368(AM286415|pid:none) Yersinia enterocolitica subsp. e... 83 3e-14
AP009384_1859(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 83 3e-14
BA000040_5112(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 83 4e-14
CP000529_2418(CP000529|pid:none) Polaromonas naphthalenivorans C... 83 4e-14
CP000964_4979(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 83 4e-14
AE016853_4812(AE016853|pid:none) Pseudomonas syringae pv. tomato... 82 6e-14
CP000647_4505(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 82 6e-14
CP000248_1939(CP000248|pid:none) Novosphingobium aromaticivorans... 82 6e-14
CP000352_2085(CP000352|pid:none) Ralstonia metallidurans CH34, c... 82 6e-14
CP001389_1067(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 82 6e-14
CP000644_645(CP000644|pid:none) Aeromonas salmonicida subsp. sal... 82 6e-14
CP000563_3585(CP000563|pid:none) Shewanella baltica OS155, compl... 82 6e-14
CP000927_1494(CP000927|pid:none) Caulobacter sp. K31, complete g... 82 6e-14
CP000416_635(CP000416|pid:none) Lactobacillus brevis ATCC 367, c... 82 7e-14
AM181176_517(AM181176|pid:none) Pseudomonas fluorescens SBW25 co... 82 7e-14
CP001048_448(CP001048|pid:none) Yersinia pseudotuberculosis PB1/... 82 7e-14
AM889285_44(AM889285|pid:none) Gluconacetobacter diazotrophicus ... 82 7e-14
AD0047(AD0047) ribonuclease R (EC 3.1.-.-) [imported] - Yersinia... 82 7e-14
CP001091_1486(CP001091|pid:none) Actinobacillus pleuropneumoniae... 82 7e-14
CP000789_84(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 chro... 82 7e-14
AE017143_589(AE017143|pid:none) Haemophilus ducreyi strain 35000... 82 7e-14
AE016823_35(AE016823|pid:none) Leptospira interrogans serovar Co... 82 1e-13
CP000024_602(CP000024|pid:none) Streptococcus thermophilus CNRZ1... 82 1e-13
CP000912_558(CP000912|pid:none) Brucella suis ATCC 23445 chromos... 82 1e-13
CP000709_505(CP000709|pid:none) Brucella ovis ATCC 25840 chromos... 82 1e-13
CP001068_1053(CP001068|pid:none) Ralstonia pickettii 12J chromos... 82 1e-13
AE008918_666(AE008918|pid:none) Brucella melitensis 16M chromoso... 82 1e-13
CP001132_1525(CP001132|pid:none) Acidithiobacillus ferrooxidans ... 82 1e-13
CU633749_1844(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 81 1e-13
AE017282_1868(AE017282|pid:none) Methylococcus capsulatus str. B... 81 1e-13
CP000115_1706(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 81 2e-13
CP000655_1263(CP000655|pid:none) Polynucleobacter necessarius su... 81 2e-13
CP000908_2346(CP000908|pid:none) Methylobacterium extorquens PA1... 81 2e-13
CP001298_2527(CP001298|pid:none) Methylobacterium chloromethanic... 81 2e-13
CP000302_506(CP000302|pid:none) Shewanella denitrificans OS217, ... 81 2e-13
AL591688_1304(AL591688|pid:none) Sinorhizobium meliloti 1021 com... 81 2e-13
AK001346_1(AK001346|pid:none) Homo sapiens cDNA FLJ10484 fis, cl... 80 2e-13
CP000414_1641(CP000414|pid:none) Leuconostoc mesenteroides subsp... 80 2e-13
CP000103_1939(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 80 2e-13
CP000390_1344(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 80 2e-13
CP001280_3743(CP001280|pid:none) Methylocella silvestris BL2, co... 80 2e-13
CP000462_678(CP000462|pid:none) Aeromonas hydrophila subsp. hydr... 80 2e-13
AM260479_2293(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 80 2e-13
CP001011_846(CP001011|pid:none) Xylella fastidiosa M23, complete... 80 2e-13
CP000539_2470(CP000539|pid:none) Acidovorax sp. JS42, complete g... 80 2e-13
CP001184_63(CP001184|pid:none) Ureaplasma urealyticum serovar 10... 80 2e-13
CP000527_772(CP000527|pid:none) Desulfovibrio vulgaris subsp. vu... 80 3e-13
AE007869_1277(AE007869|pid:none) Agrobacterium tumefaciens str. ... 80 3e-13
AF447860_1(AF447860|pid:none) Methylococcus capsulatus Rnr-like ... 80 3e-13
AE017285_2454(AE017285|pid:none) Desulfovibrio vulgaris subsp. v... 80 3e-13
CP000348_61(CP000348|pid:none) Leptospira borgpetersenii serovar... 80 4e-13
AP009247_467(AP009247|pid:none) Candidatus Vesicomyosocius okuta... 79 5e-13
CP000301_2213(CP000301|pid:none) Rhodopseudomonas palustris BisB... 79 5e-13
CU234118_4274(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 79 5e-13
CP000282_1052(CP000282|pid:none) Saccharophagus degradans 2-40, ... 79 6e-13
AE016795_1214(AE016795|pid:none) Vibrio vulnificus CMCP6 chromos... 79 6e-13
(Q9CH00) RecName: Full=Ribonuclease R 1; Short=RNase R ... 79 6e-13
BA000037_3061(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 79 6e-13
CP001321_1351(CP001321|pid:none) Haemophilus parasuis SH0165, co... 79 8e-13
BX571965_1890(BX571965|pid:none) Burkholderia pseudomallei strai... 79 8e-13
CP000230_3193(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 79 8e-13
CP000572_1797(CP000572|pid:none) Burkholderia pseudomallei 1106a... 79 8e-13
CP001277_284(CP001277|pid:none) Candidatus Hamiltonella defensa ... 78 1e-12
CP001010_587(CP001010|pid:none) Polynucleobacter necessarius sub... 78 1e-12
CP000151_1500(CP000151|pid:none) Burkholderia sp. 383 chromosome... 78 1e-12
CP000627_2119(CP000627|pid:none) Vibrio cholerae O395 chromosome... 77 2e-12
CP000283_3020(CP000283|pid:none) Rhodopseudomonas palustris BisB... 77 2e-12
CP000155_5313(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 77 2e-12
CP001349_7096(CP001349|pid:none) Methylobacterium nodulans ORS 2... 77 2e-12
AM746676_7443(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 77 2e-12
CP000378_1057(CP000378|pid:none) Burkholderia cenocepacia AU 105... 77 2e-12
AM747720_1547(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 77 2e-12
CP000394_803(CP000394|pid:none) Granulibacter bethesdensis CGDNI... 77 2e-12
CP001096_3473(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 77 3e-12
BX571874_116(BX571874|pid:none) Photorhabdus luminescens subsp. ... 77 3e-12
FP236842_506(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/96... 76 4e-12
CP000699_4019(CP000699|pid:none) Sphingomonas wittichii RW1, com... 76 4e-12
BX572603_41(BX572603|pid:none) Rhodopseudomonas palustris CGA009... 76 4e-12
CP000155_1634(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 76 4e-12
CP000675_110(CP000675|pid:none) Legionella pneumophila str. Corb... 76 4e-12
CP000512_2937(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 76 5e-12
CP000826_436(CP000826|pid:none) Serratia proteamaculans 568, com... 76 5e-12
AE017263_210(AE017263|pid:none) Mesoplasma florum L1 complete ge... 75 7e-12
AF174645_1(AF174645|pid:none) Brucella abortus virulence-associa... 75 7e-12
AE017308_265(AE017308|pid:none) Mycoplasma mobile 163K complete ... 75 9e-12
CP000463_3351(CP000463|pid:none) Rhodopseudomonas palustris BisA... 75 1e-11
(P57628) RecName: Full=Ribonuclease R; Short=RNase R; ... 75 1e-11
CR378673_270(CR378673|pid:none) Photobacterium profundum SS9; se... 75 1e-11
CP000360_3960(CP000360|pid:none) Acidobacteria bacterium Ellin34... 75 1e-11
CP001161_519(CP001161|pid:none) Buchnera aphidicola str. 5A (Acy... 75 1e-11
CP001158_517(CP001158|pid:none) Buchnera aphidicola str. Tuc7 (A... 75 1e-11
BA000003_527(BA000003|pid:none) Buchnera aphidicola str. APS (Ac... 75 1e-11
CP000267_1939(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 74 2e-11
CP001503_1860(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 74 2e-11
CP001025_1452(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 74 2e-11
CP001472_1920(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 74 2e-11
CP000792_1313(CP000792|pid:none) Campylobacter concisus 13826, c... 74 3e-11
AM942759_3341(AM942759|pid:none) Proteus mirabilis strain HI4320... 73 3e-11
CP000777_22(CP000777|pid:none) Leptospira biflexa serovar Patoc ... 73 3e-11
CP000943_6335(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 73 3e-11
CP000524_793(CP000524|pid:none) Bartonella bacilliformis KC583, ... 73 4e-11
CP000251_2424(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 73 4e-11
AM260522_224(AM260522|pid:none) Helicobacter acinonychis str. Sh... 73 4e-11
AM260525_1001(AM260525|pid:none) Bartonella tribocorum CIP 10547... 72 6e-11
AE017125_534(AE017125|pid:none) Helicobacter hepaticus ATCC 5144... 72 6e-11
CP001032_2652(CP001032|pid:none) Opitutus terrae PB90-1, complet... 72 8e-11
AE015450_458(AE015450|pid:none) Mycoplasma gallisepticum strain ... 72 1e-10
EF583992_5(EF583992|pid:none) Uncultured haloarchaeon clone fosm... 71 1e-10
AM180088_2251(AM180088|pid:none) Haloquadratum walsbyi DSM 16790... 71 1e-10
CP001001_3521(CP001001|pid:none) Methylobacterium radiotolerans ... 70 2e-10
CP001279_1210(CP001279|pid:none) Nautilia profundicola AmH, comp... 70 3e-10
CP000361_228(CP000361|pid:none) Arcobacter butzleri RM4018, comp... 70 3e-10
(P56123) RecName: Full=Ribonuclease R; Short=RNase R; ... 69 5e-10
AM910989_33(AM910989|pid:none) Plasmodium knowlesi strain H chro... 69 5e-10
BA000026_334(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c... 69 5e-10
CP000117_547(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 69 8e-10
(P75529) RecName: Full=Ribonuclease R; Short=RNase R; ... 69 8e-10
AB027825_1(AB027825|pid:none) Schizosaccharomyces pombe gene for... 68 1e-09
CP000241_1192(CP000241|pid:none) Helicobacter pylori HPAG1, comp... 68 1e-09
CP001472_2574(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 68 1e-09
CP000767_694(CP000767|pid:none) Campylobacter curvus 525.92, com... 67 2e-09
CP001173_1167(CP001173|pid:none) Helicobacter pylori G27, comple... 67 2e-09
AM910993_336(AM910993|pid:none) Plasmodium knowlesi strain H chr... 67 2e-09
CR382399_67(CR382399|pid:none) Plasmodium falciparum chromosome ... 66 4e-09
CP000932_905(CP000932|pid:none) Campylobacter lari RM2100, compl... 66 4e-09
AL844505_152(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 66 4e-09
CP001037_5703(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 66 5e-09
AP009178_1162(AP009178|pid:none) Nitratiruptor sp. SB155-2 genom... 66 5e-09
AL845506_5(AL845506|pid:none) Mouse DNA sequence from clone RP23... 65 9e-09
AL845506_4(AL845506|pid:none) Mouse DNA sequence from clone RP23... 65 9e-09
BC172937_1(BC172937|pid:none) Synthetic construct Mus musculus c... 65 9e-09
AP009179_431(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic D... 64 2e-08
CP000153_541(CP000153|pid:none) Sulfurimonas denitrificans DSM 1... 64 2e-08
CP001072_1226(CP001072|pid:none) Helicobacter pylori Shi470, com... 64 3e-08
(A7MMD8) RecName: Full=Exoribonuclease 2; EC=3.1.13.1; ... 63 4e-08
CP000828_4108(CP000828|pid:none) Acaryochloris marina MBIC11017,... 62 6e-08
CP000814_588(CP000814|pid:none) Campylobacter jejuni subsp. jeju... 62 8e-08
CP000025_716(CP000025|pid:none) Campylobacter jejuni RM1221, com... 62 8e-08
AL111168_595(AL111168|pid:none) Campylobacter jejuni subsp. jeju... 62 1e-07
CP000487_1077(CP000487|pid:none) Campylobacter fetus subsp. fetu... 62 1e-07
AY811507_1(AY811507|pid:none) Schistosoma japonicum SJCHGC05889 ... 61 2e-07
CR378676_119(CR378676|pid:none) Photobacterium profundum SS9 chr... 61 2e-07
AY920334_3(AY920334|pid:none) Campylobacter jejuni type I restri... 61 2e-07
(A8AG96) RecName: Full=Exoribonuclease 2; EC=3.1.13.1; ... 60 4e-07
AY596297_1840(AY596297|pid:none) Haloarcula marismortui ATCC 430... 60 4e-07
(P59107) RecName: Full=Exoribonuclease 2; EC=3.1.13.1; ... 59 5e-07
(Q0T5B1) RecName: Full=Exoribonuclease 2; EC=3.1.13.1; ... 59 5e-07
CP000473_5428(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 59 9e-07
CP000254_1112(CP000254|pid:none) Methanospirillum hungatei JF-1,... 59 9e-07
(Q32GP4) RecName: Full=Exoribonuclease 2; EC=3.1.13.1; ... 58 1e-06
AL929355_59(AL929355|pid:none) Plasmodium falciparum strain 3D7,... 58 1e-06
AL844508_60(AL844508|pid:none) Plasmodium falciparum 3D7 chromos... 58 1e-06
FM180568_1480(FM180568|pid:none) Escherichia coli 0127:H6 E2348/... 58 1e-06
(Q31ZY2) RecName: Full=Exoribonuclease 2; EC=3.1.13.1; ... 58 1e-06
EU901693_1(EU901693|pid:none) Escherichia coli strain TB182A RNa... 58 1e-06
AE005174_2226(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 58 1e-06
(Q3Z135) RecName: Full=Exoribonuclease 2; EC=3.1.13.1; ... 58 1e-06
CU928162_1466(CU928162|pid:none) Escherichia coli ED1a chromosom... 58 1e-06
CP001113_1724(CP001113|pid:none) Salmonella enterica subsp. ente... 58 1e-06
(A1AAQ4) RecName: Full=Exoribonuclease 2; EC=3.1.13.1; ... 58 1e-06
(B7N4A3) RecName: Full=Exoribonuclease 2; EC=3.1.13.1; ... 58 1e-06
(B7LY47) RecName: Full=Exoribonuclease 2; EC=3.1.13.1; ... 58 1e-06
(A7ZLA9) RecName: Full=Exoribonuclease 2; EC=3.1.13.1; ... 58 1e-06
CR522870_1688(CR522870|pid:none) Desulfotalea psychrophila LSv54... 58 1e-06
AE004437_2036(AE004437|pid:none) Halobacterium sp. NRC-1, comple... 57 3e-06
(Q5PCZ6) RecName: Full=Exoribonuclease 2; EC=3.1.13.1; ... 57 3e-06
CP001600_1736(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 57 3e-06
(Q57NV9) RecName: Full=Exoribonuclease 2; EC=3.1.13.1; ... 56 4e-06
(A9MWU8) RecName: Full=Exoribonuclease 2; EC=3.1.13.1; ... 56 4e-06
AM933173_1374(AM933173|pid:none) Salmonella enterica subsp. ente... 56 4e-06

>(Q9CSH3) RecName: Full=Exosome complex exonuclease RRP44;
EC=3.1.13.-; AltName: Full=Ribosomal RNA-processing
protein 44; AltName: Full=Protein DIS3 homolog;
Length = 958

Score = 338 bits (868), Expect = 3e-91
Identities = 187/377 (49%), Positives = 242/377 (64%), Gaps = 2/377 (0%)
Frame = +3

Query: 684 HTGEIIAVEYTKSIIRSCASLTYEQAQIRIDDKSQNDQITVNLRNLNSLAKILRKQRFDR 863
H EI+ +TKS+I S ASLTY +AQ+RID + ND IT +LR LN LAKIL+K R ++
Sbjct: 568 HNAEILKTRFTKSVINSKASLTYAEAQMRIDSAAMNDDITTSLRGLNQLAKILKKGRIEK 627

Query: 864 GALYLASPQVKFKTEELGGDPSDVEIYQLRETNSMIEEFMLLANIWVAKKIYKHFPGCAM 1043
GAL L+SP+++F + DP D++ +LRETNSM+EEFMLLANI VAKKI++ F A+
Sbjct: 628 GALTLSSPEIRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHAL 687

Query: 1044 LRRHPTPNKAAFDLLTKLIENKGYKFSTTTSKDLADSLDSAVDKNDSYFNTLCRIMTTRC 1223
LR+HP P + +D+L K ++K + T T+K LADSLD A + Y NTL RI+ TRC
Sbjct: 688 LRKHPAPPPSNYDILVKAAKSKNLQIKTDTAKSLADSLDRAESPDFPYLNTLLRILATRC 747

Query: 1224 MSPAKYFSSGSLPYEDFNHYGLATDIYTHFTSPIRRYPDIIVHRLLASAIGIQSVSLNLE 1403
M A YF SG DF+HYGLA+ IYTHFTSPIRRY DIIVHRLLA AIG L
Sbjct: 748 MMQAVYFCSGM--DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTYPELT 805

Query: 1404 NK-TISALTENNNFRHKMAQYASRGSTQLHTLIFFKGRKSV-EDAYIIRVKANAFVVLVP 1577
+K +S + +N NFRHKMAQYA R S HT +FFK + V E+AYI+ V+ NA VVL+P
Sbjct: 806 DKHKLSDICKNLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEEAYILFVRKNAIVVLIP 865

Query: 1578 RYGFEGTVYVSDPXXXXXXXXXXXXXXXIYNYNHEDQTLGNGIHTFRVFDKVTVEIYVDD 1757
+YG EGTV+ + Y+ E +L F VFDKV V+I +D
Sbjct: 866 KYGLEGTVFFEEKDKPKPRLA----------YDDEIPSLRIEGTVFHVFDKVKVKITLDS 915

Query: 1758 SKAHDQKLKINCINPNI 1808
S QK+++ + P I
Sbjct: 916 SNLQHQKIRMALVEPQI 932

Score = 156 bits (395), Expect = 2e-36
Identities = 85/211 (40%), Positives = 124/211 (58%), Gaps = 11/211 (5%)
Frame = +3

Query: 66 MQSNKCFYKATKKGTIIKVVNEIYLRDDIPCGHDSCKEC-------KIKLERRTTVEDRA 224
M +K F K T+ G ++K+V E YLRDDI CG +C C ++L+ R
Sbjct: 1 MLRSKTFLKKTRAGGVVKIVREHYLRDDIGCGAPACSACGGAHAGPALELQPRDQASSLC 60

Query: 225 LLSNEINTIDSDKILILDTNVILHQIDLLEDPTIKNCIILSTVLDEVKSQNRAIFNRIRD 404
+ L+ DTNV+LHQID+LE P I+N I+L TV+ EV++++ I+ RIRD
Sbjct: 61 PWPH---------YLLPDTNVLLHQIDVLEHPAIRNVIVLQTVMQEVRNRSAPIYKRIRD 111

Query: 405 VIKESSRKFYVYSNEYSTFTSITRENGESPNDRNDRAIRVATQWYKSHLHKYS----IKV 572
V + FY ++NE+ T I +E GE+ NDRNDRAIRVA +WY HL + + ++V
Sbjct: 112 VTNNQEKHFYTFTNEHHKETYIEQEQGENANDRNDRAIRVAAKWYNEHLKRVAADSQLQV 171

Query: 573 LLITNDKDNLKKAKSLGLDCQTIQDLVFELS 665
+LITND+ N +KA G+ T ++ V L+
Sbjct: 172 ILITNDRKNKEKAVQEGIPAFTCEEYVKSLT 202

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,570,596,649
Number of extensions: 46808692
Number of successful extensions: 119453
Number of sequences better than 10.0: 620
Number of HSP's gapped: 118413
Number of HSP's successfully gapped: 677
Length of query: 677
Length of database: 1,040,966,779
Length adjustment: 135
Effective length of query: 542
Effective length of database: 608,388,304
Effective search space: 329746460768
Effective search space used: 329746460768
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 1.03 gvh: 0.49 alm: 0.15 top: 0.80 tms: 0.07 mit: 0.27 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 1.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.05 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 1.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

32.0 %: cytoplasmic
24.0 %: mitochondrial
20.0 %: nuclear
8.0 %: plasma membrane
8.0 %: endoplasmic reticulum
4.0 %: vesicles of secretory system
4.0 %: peroxisomal

>> prediction for Contig-U11233-1 is cyt

VS (DIR, S) 0
VH (FL, L) 4
VF (FL, S) 0
AH (FL, L) 4
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 1
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0