Contig-U11228-1 |
Contig ID |
Contig-U11228-1 |
Contig update |
2002.12.18 |
Contig sequence |
|
Gap |
gap included |
Contig length |
1910 |
Chromosome number (1..6, M) |
3 |
Chromosome length |
6358359 |
Start point |
1890716 |
End point |
1892614 |
Strand (PLUS/MINUS) |
PLUS |
Number of clones |
15 |
Number of EST |
23 |
Link to clone list |
U11228 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.10 |
Homology vs CSM-cDNA |
|
dna update |
2008.11.23 |
Homology vs DNA |
Query= Contig-U11228-1 (Contig-U11228-1Q) /CSM_Contig/Contig-U11228-1Q.Seq.d (1920 letters)
Database: ddbj_A 92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(BJ364721) Dictyostelium discoideum cDNA clone:ddc32p13, 5' ... 1322 0.0 1 (BJ409087) Dictyostelium discoideum cDNA clone:dds47p24, 3' ... 1259 0.0 1 (BJ378589) Dictyostelium discoideum cDNA clone:ddc32p03, 3' ... 1259 0.0 1 (BJ353017) Dictyostelium discoideum cDNA clone:dda48o15, 3' ... 1259 0.0 1 (BJ385926) Dictyostelium discoideum cDNA clone:ddc56h18, 3' ... 1255 0.0 1 (BJ349247) Dictyostelium discoideum cDNA clone:dda35j21, 3' ... 1255 0.0 1 (BJ373083) Dictyostelium discoideum cDNA clone:ddc15l18, 3' ... 1253 0.0 1 (BJ378749) Dictyostelium discoideum cDNA clone:ddc32p13, 3' ... 1227 0.0 2 (BJ353765) Dictyostelium discoideum cDNA clone:dda51i08, 3' ... 674 0.0 2 (BJ367104) Dictyostelium discoideum cDNA clone:ddc41k08, 5' ... 876 0.0 2 (BJ335037) Dictyostelium discoideum cDNA clone:dda48o15, 5' ... 952 0.0 1 (BJ409052) Dictyostelium discoideum cDNA clone:dds47i20, 3' ... 944 0.0 1 (BJ397841) Dictyostelium discoideum cDNA clone:dds47h24, 5' ... 942 0.0 1 (BJ331554) Dictyostelium discoideum cDNA clone:dda35j21, 5' ... 922 0.0 1 (BJ381395) Dictyostelium discoideum cDNA clone:ddc41k08, 3' ... 868 0.0 1 (AU263847) Dictyostelium discoideum vegetative cDNA clone:VS... 825 0.0 1 (AU263846) Dictyostelium discoideum vegetative cDNA clone:VS... 825 0.0 1 (BJ335735) Dictyostelium discoideum cDNA clone:dda51i08, 5' ... 809 0.0 2 (BJ397843) Dictyostelium discoideum cDNA clone:dds47i20, 5' ... 815 0.0 1 (BJ371035) Dictyostelium discoideum cDNA clone:ddc56l08, 5' ... 815 0.0 1 (BJ397875) Dictyostelium discoideum cDNA clone:dds47p24, 5' ... 811 0.0 1 (BJ364577) Dictyostelium discoideum cDNA clone:ddc32p03, 5' ... 698 0.0 1 (BJ367393) Dictyostelium discoideum cDNA clone:ddc42f13, 5' ... 648 0.0 1 (BJ371400) Dictyostelium discoideum cDNA clone:ddc57h19, 5' ... 646 0.0 1 (BJ367146) Dictyostelium discoideum cDNA clone:ddc41f13, 5' ... 632 e-176 1 (AB030280) Mus musculus Pig-n mRNA for phosphatidylinositolg... 62 5e-18 5 (BC021148) Mus musculus phosphatidylinositol glycan anchor b... 62 2e-17 5 (AB030279) Mus musculus Pig-n mRNA for phosphatidylinositolg... 62 2e-17 5 (AK165971) Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-l... 62 3e-17 4 (CO734184) SlLH03c07p22f1 squirrel heart library 1 Spermophi... 50 2e-16 4 (BI658990) 603301318F1 NCI_CGAP_Mam4 Mus musculus cDNA clone... 62 2e-16 4 (AR551326) Sequence 6457 from patent US 6747137. 62 1e-15 5 (AK315134) Homo sapiens cDNA, FLJ96099, highly similar to Ho... 46 1e-13 4 (BC028363) Homo sapiens phosphatidylinositol glycan anchor b... 46 2e-13 4 (CQ896542) Sequence 366 from Patent WO2004076614. 46 3e-13 4 (AF109219) Homo sapiens Mcd4p homolog mRNA, complete cds. 46 3e-13 4 (CS476921) Sequence 120 from Patent WO2006133931. 46 4e-13 4 (CS458587) Sequence 120 from Patent EP1734118. 46 4e-13 4 (BZ298841) CG4613.r1 Candida glabrata Random Genomic Library... 70 4e-12 2 (CN833314) AGENCOURT_24959954 NIH_MGC_169 Mus musculus cDNA ... 62 2e-11 2 (EL344856) CCEL12750.b1_K19.ab1 CCE(LMS) endive Cichorium en... 82 2e-11 2 (AB030316) Mus musculus Pig-n gene for phosphatidylinositolg... 62 2e-11 4 (DY294852) IC0AAA86CG03RM1 CitNFL Citrus clementina cDNA 5',... 84 2e-11 1 (DY292438) IC0AAA7DH07RM1 CitNFL Citrus clementina cDNA 5', ... 84 2e-11 1 (DY261328) KN0AAP2YH23FM1 Fruit-TF Citrus clementina cDNA 5'... 84 2e-11 1 (CX290998) C03002G05Rv OF1 Citrus clementina cDNA clone C030... 84 2e-11 1 (EY741215) CS00-C3-705-082-A09-CT.F Sweet orange fruit, deve... 84 2e-11 1 (CQ925022) Sequence 55 from Patent WO2004083403. 46 7e-11 4 (CQ925025) Sequence 58 from Patent WO2004083403. 46 7e-11 4 (CQ925023) Sequence 56 from Patent WO2004083403. 46 8e-11 4 (CQ925024) Sequence 57 from Patent WO2004083403. 46 1e-10 4 (AK014165) Mus musculus 13 days embryo head cDNA, RIKEN full... 62 4e-10 3 (AY416402) Mus musculus PIGN gene, VIRTUAL TRANSCRIPT, parti... 62 1e-09 3 (BQ130453) ij86d04.x1 Human insulinoma Homo sapiens cDNA clo... 46 4e-09 3 (AC166354) Mus musculus BAC clone RP24-283P23 from chromosom... 62 6e-09 5 (BX427310) human full-length cDNA 5-PRIME end of clone CS0DM... 46 8e-09 3 (CU688464) Synthetic construct Homo sapiens gateway clone IM... 46 1e-08 3 (DQ976364) Rattus norvegicus phosphatidylinositol glycan cla... 60 2e-08 2 (CU302360) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8e-08 10 (CV866429) PDUts1030H02 Porcine testis cDNA library I Sus sc... 56 1e-07 2 (CV870506) PDUts1080B07 Porcine testis cDNA library I Sus sc... 56 2e-07 2 (CV870511) PDUts1080B12 Porcine testis cDNA library I Sus sc... 56 2e-07 2 (AC101652) Mus musculus chromosome 1, clone RP23-58D20, comp... 62 2e-07 6 (AM438903) Vitis vinifera contig VV78X066484.4, whole genome... 54 3e-07 5 (CR380959) Candida glabrata strain CBS138 chromosome M compl... 70 3e-07 1 (DA993704) Homo sapiens cDNA clone SYNOV4006284, 5' end, mRN... 46 2e-06 2 (CJ070639) Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-l... 62 1e-05 2 (AC123149) Rattus norvegicus clone CH230-45L6, *** SEQUENCIN... 60 1e-05 7 (BU009156) QGH9K16.yg.ab1 QG_EFGHJ lettuce serriola Lactuca ... 56 2e-05 3 (BQ833651) LL6in11410T7 AFT024-subtracted library Mus muscul... 64 2e-05 1 (DB100215) Homo sapiens cDNA clone TESTI4052071, 5' end, mRN... 46 3e-05 2 (DB227402) Homo sapiens cDNA clone TRACH3019887, 5' end, mRN... 46 4e-05 3 (DA843160) Homo sapiens cDNA clone PLACE6010786, 5' end, mRN... 46 4e-05 2 (DB194536) Homo sapiens cDNA clone TRACH1000215, 5' end, mRN... 46 4e-05 2 (DB091662) Homo sapiens cDNA clone TESTI4041072, 5' end, mRN... 46 4e-05 2 (DB098397) Homo sapiens cDNA clone TESTI4049881, 5' end, mRN... 46 4e-05 2 (DA436807) Homo sapiens cDNA clone CTONG2003883, 5' end, mRN... 46 4e-05 2 (DB238032) Homo sapiens cDNA clone TRACH3033880, 5' end, mRN... 46 4e-05 2 (DN998103) TC110315 Human breast cancer tissue, large insert... 46 4e-05 2 (DR000437) TC106987 Human fetal brain, large insert, pCMV ex... 46 4e-05 2 (AF152004) Stylophora pistillata heat shock protein 70 (HSP7... 56 4e-05 3 (CN356583) 17000531345966 GRN_EB Homo sapiens cDNA 5', mRNA ... 46 5e-05 2 (CX758040) AGENCOURT_40971665 NIH_MGC_279 Homo sapiens cDNA ... 46 5e-05 2 (CK342307) K0422C06-5N NIA Mouse Mesenchymal Stem Cell cDNA ... 62 8e-05 1 (BY713141) Mus musculus 13 days embryo head cDNA, RIKEN full... 62 8e-05 1 (BG242522) 602354327F1 NCI_CGAP_Mam1 Mus musculus cDNA clone... 62 8e-05 1 (BB872848) Mus musculus cDNA, RIKEN full-length enriched lib... 62 8e-05 1 (BB865472) Mus musculus blood RCB-0035 WEHI-3 cDNA, RIKEN fu... 62 8e-05 1 (BC111233) Bos taurus cDNA clone IMAGE:8066506, with apparen... 36 1e-04 4 (DQ331948) Synthetic construct Saccharomyces cerevisiae clon... 40 2e-04 3 (DI166690) Methods of screening for compounds that inhibit t... 40 2e-04 3 (DI156988) Methods of screening for compounds that inhibit t... 40 2e-04 3 (DI131518) Methods of screening for compounds that inhibit t... 40 2e-04 3 (DD346397) Methods of screening for compounds that inhibit t... 40 2e-04 3 (CQ824275) Sequence 30 from Patent WO2004048567. 40 2e-04 3 (BM488010) pgm2n.pk006.e15 Normalized Chicken Breast Muscle,... 60 3e-04 1 (AP002398) Homo sapiens genomic DNA, chromosome 18q21 clone:... 42 4e-04 9 (DB085545) Homo sapiens cDNA clone TESTI4032858, 5' end, mRN... 42 5e-04 2 (DA904941) Homo sapiens cDNA clone SKNMC2005417, 5' end, mRN... 46 5e-04 2 (Z28165) S.cerevisiae chromosome XI reading frame ORF YKL165c. 40 7e-04 3
>(BJ364721) Dictyostelium discoideum cDNA clone:ddc32p13, 5' end, single read. Length = 670
Score = 1322 bits (667), Expect = 0.0 Identities = 669/670 (99%) Strand = Plus / Plus
Query: 511 agaatttgatcatcttttcaatgaaactacctattcatttggttatggtagtccagatgt 570 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatttgatnatcttttcaatgaaactacctattcatttggttatggtagtccagatgt 60
Query: 571 tttaccaatgttttcagaaggtgtaccacatatgcaatcagaatcctatccagaggaagc 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tttaccaatgttttcagaaggtgtaccacatatgcaatcagaatcctatccagaggaagc 120
Query: 631 agaggatttcgcatcagatgcatcaaaattggacacttgggtatttgataaagttcaaca 690 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agaggatttcgcatcagatgcatcaaaattggacacttgggtatttgataaagttcaaca 180
Query: 691 attactattaaatgcctcaaccaatgatcaagaattgaacagaaagttacgttcagataa 750 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 attactattaaatgcctcaaccaatgatcaagaattgaacagaaagttacgttcagataa 240
Query: 751 agtatcaatattcttacatttattaggtttggatacaaatggtcatgcatatagaccaaa 810 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 agtatcaatattcttacatttattaggtttggatacaaatggtcatgcatatagaccaaa 300
Query: 811 ttcaaaggaatattttgataatattgctttggtagatagaggcattgaaaagatagtaaa 870 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ttcaaaggaatattttgataatattgctttggtagatagaggcattgaaaagatagtaaa 360
Query: 871 gttaatcgaagatttctatggtaatgatggtaagacagcatttgttttcactgcagatca 930 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gttaatcgaagatttctatggtaatgatggtaagacagcatttgttttcactgcagatca 420
Query: 931 tggtatgagcaatagaggttcacatggtgatggtgaacgtgcaaacacagagacaccatt 990 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tggtatgagcaatagaggttcacatggtgatggtgaacgtgcaaacacagagacaccatt 480
Query: 991 agtcgtatggggtagtggtgtggagaggtccgttatcatcagatcttcaaatggagagaa 1050 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 agtcgtatggggtagtggtgtggagaggtccgttatcatcagatcttcaaatggagagaa 540
Query: 1051 ttgcatcacttcgtggcaaagcaaaggagatgttaccagttaatgtagaaacaccaacca 1110 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 ttgcatcacttcgtggcaaagcaaaggagatgttaccagttaatgtagaaacaccaacca 600
Query: 1111 attggaaactatcatcattgttccgatcagatgtatcacaggccgatattgcaccattga 1170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 attggaaactatcatcattgttccgatcagatgtatcacaggccgatattgcaccattga 660
Query: 1171 tgacctcatt 1180 |||||||||| Sbjct: 661 tgacctcatt 670
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 92845959 Number of Hits to DB: 2,125,279,497 Number of extensions: 136901769 Number of successful extensions: 11550624 Number of sequences better than 10.0: 269 Length of query: 1920 Length of database: 95,242,211,685 Length adjustment: 24 Effective length of query: 1896 Effective length of database: 97,308,875,965 Effective search space: 184497628829640 Effective search space used: 184497628829640 X1: 11 (21.8 bits) S2: 22 (44.1 bits)
|
protein update |
2009. 6.29 |
Homology vs Protein |
Query= Contig-U11228-1 (Contig-U11228-1Q) /CSM_Contig/Contig-U11228-1Q.Seq.d (1920 letters)
Database: nrp_A 3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
AB030279_1(AB030279|pid:none) Mus musculus Pig-n mRNA for phosph... 377 e-106 AB030280_1(AB030280|pid:none) Mus musculus Pig-n mRNA for phosph... 377 e-106 AK315134_1(AK315134|pid:none) Homo sapiens cDNA, FLJ96099, highl... 375 e-106 AB030316_1(AB030316|pid:none) Mus musculus Pig-n gene for phosph... 377 e-106 (Q2U0S9) RecName: Full=GPI ethanolamine phosphate transferase 1;... 352 3e-97 CU638744_520(CU638744|pid:none) Podospora anserina genomic DNA c... 328 4e-90 (Q7SAP1) RecName: Full=GPI ethanolamine phosphate transferase 1;... 326 5e-90 (Q4ILH3) RecName: Full=GPI ethanolamine phosphate transferase 1;... 327 8e-90 (Q6C0Z3) RecName: Full=GPI ethanolamine phosphate transferase 1;... 328 2e-88 (Q6FJ81) RecName: Full=GPI ethanolamine phosphate transferase 1;... 328 4e-88 CP000501_79(CP000501|pid:none) Pichia stipitis CBS 6054 chromoso... 317 8e-87 (Q8WZK2) RecName: Full=GPI ethanolamine phosphate transferase 1;... 319 8e-87 (Q5A3M6) RecName: Full=GPI ethanolamine phosphate transferase 1;... 322 2e-86 FM992688_1126(FM992688|pid:none) Candida dubliniensis CD36 chrom... 322 3e-86 (Q757X5) RecName: Full=GPI ethanolamine phosphate transferase 1;... 318 3e-85 CP001575_229(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 311 2e-83 AP003999_13(AP003999|pid:none) Oryza sativa Japonica Group genom... 301 3e-83 CP000584_115(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 298 8e-82 BT081018_1(BT081018|pid:none) Caligus clemensi clone ccle-evs-51... 298 5e-79 CR954204_135(CR954204|pid:none) Ostreococcus tauri strain OTTH05... 296 1e-78 AC024812_8(AC024812|pid:none) Caenorhabditis elegans cosmid Y54E... 285 3e-75 DQ976364_1(DQ976364|pid:none) Rattus norvegicus phosphatidylinos... 251 5e-65 FN357490_14(FN357490|pid:none) Schistosoma mansoni genome sequen... 235 4e-60 AP008208_1663(AP008208|pid:none) Oryza sativa (japonica cultivar... 229 2e-58 AE014297_4297(AE014297|pid:none) Drosophila melanogaster chromos... 174 1e-41 AY811862_1(AY811862|pid:none) Schistosoma japonicum SJCHGC03961 ... 166 2e-39 AE014297_3343(AE014297|pid:none) Drosophila melanogaster chromos... 162 3e-38 BT001286_1(BT001286|pid:none) Drosophila melanogaster AT09001 fu... 162 5e-38 AK132928_1(AK132928|pid:none) Mus musculus adult male testis cDN... 118 7e-25 AB027957_1(AB027957|pid:none) Schizosaccharomyces pombe gene for... 111 1e-24 AE014297_1361(AE014297|pid:none) Drosophila melanogaster chromos... 86 6e-15 AY812505_1(AY812505|pid:none) Schistosoma japonicum SJCHGC04306 ... 67 2e-09 CR382123_758(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 66 4e-09 T33168(T33168)hypothetical protein M01B12.2 - Caenorhabditis ele... 65 1e-08 FN357476_23(FN357476|pid:none) Schistosoma mansoni genome sequen... 58 1e-06 (Q9NXG5) RecName: Full=GPI ethanolamine phosphate transferase 2;... 57 2e-06 AK074815_1(AK074815|pid:none) Homo sapiens cDNA FLJ90334 fis, cl... 57 2e-06 AY358538_1(AY358538|pid:none) Homo sapiens clone DNA84920 RLGS19... 57 2e-06 (Q6CLN2) RecName: Full=GPI ethanolamine phosphate transferase 2;... 57 3e-06 (Q74ZS2) RecName: Full=GPI ethanolamine phosphate transferase 3;... 56 5e-06 T21487(T21487)hypothetical protein F28C6.4 - Caenorhabditis eleg... 54 2e-05 BT021790_1(BT021790|pid:none) Bos taurus GPI7 protein (GPI7), mR... 54 3e-05 CR626927_3473(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 54 3e-05 AM270196_32(AM270196|pid:none) Aspergillus niger contig An09c007... 53 3e-05 CP000675_1942(CP000675|pid:none) Legionella pneumophila str. Cor... 52 8e-05 AE017354_1823(AE017354|pid:none) Legionella pneumophila subsp. p... 52 8e-05 CR628336_1823(CR628336|pid:none) Legionella pneumophila str. Par... 51 1e-04 CU928169_253(CU928169|pid:none) Kluyveromyces thermotolerans str... 51 2e-04 CU928174_35(CU928174|pid:none) Zygosaccharomyces rouxii strain C... 51 2e-04 (Q6BZ57) RecName: Full=GPI ethanolamine phosphate transferase 2;... 50 2e-04 AK074715_1(AK074715|pid:none) Homo sapiens cDNA FLJ90234 fis, cl... 50 3e-04 AM920435_1236(AM920435|pid:none) Penicillium chrysogenum Wiscons... 50 4e-04 AF003137_9(AF003137|pid:none) Caenorhabditis elegans cosmid C27A... 49 5e-04 AE017348_131(AE017348|pid:none) Cryptococcus neoformans var. neo... 49 8e-04 DQ426543_1(DQ426543|pid:none) Aspergillus fumigatus phosphoethan... 49 8e-04 CP001071_1678(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 48 0.001 CR380953_166(CR380953|pid:none) Candida glabrata strain CBS138 c... 48 0.001 CP000254_628(CP000254|pid:none) Methanospirillum hungatei JF-1, ... 48 0.001 CR954215_257(CR954215|pid:none) Ostreococcus tauri strain OTTH05... 47 0.002 CP000509_1278(CP000509|pid:none) Nocardioides sp. JS614, complet... 47 0.002 AM270078_13(AM270078|pid:none) Aspergillus niger contig An04c017... 47 0.002 (Q6C7Q6) RecName: Full=GPI ethanolamine phosphate transferase 2;... 47 0.002 AF321466_1(AF321466|pid:none) Yarrowia lipolytica putative prote... 47 0.002 AP007164_107(AP007164|pid:none) Aspergillus oryzae RIB40 genomic... 46 0.004 (Q6FPB2) RecName: Full=GPI ethanolamine phosphate transferase 2;... 46 0.004 AJ430585_1(AJ430585|pid:none) Fluoribacter gormanii pafA gene fo... 46 0.004 AB005238_9(AB005238|pid:none) Arabidopsis thaliana genomic DNA, ... 46 0.005 A87794(A87794)protein C27A12.9 [imported] - Caenorhabditis elegans 46 0.005 AP008957_2317(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 45 0.007 (O13663) RecName: Full=GPI ethanolamine phosphate transferase 3;... 45 0.007 CU633900_692(CU633900|pid:none) Podospora anserina genomic DNA c... 45 0.012 CP000511_3166(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 45 0.012 AP004257_11(AP004257|pid:none) Oryza sativa Japonica Group genom... 45 0.012 CP000473_3430(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 44 0.016 BC029271_1(BC029271|pid:none) Homo sapiens phosphatidylinositol ... 44 0.021 AM910996_311(AM910996|pid:none) Plasmodium knowlesi strain H chr... 44 0.021 AC004472_3(AC004472|pid:none) Homo sapiens chromosome 9, P1 clon... 44 0.021 AL353795_4(AL353795|pid:none) Human DNA sequence from clone RP11... 44 0.021 AP007161_518(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 44 0.027 AP008955_22(AP008955|pid:none) Brevibacillus brevis NBRC 100599 ... 44 0.027 CR382136_289(CR382136|pid:none) Debaryomyces hansenii strain CBS... 43 0.035 AE013599_435(AE013599|pid:none) Drosophila melanogaster chromoso... 43 0.035 CP000431_5154(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 43 0.035 AK220315_1(AK220315|pid:none) Mus musculus mRNA for mFLJ00350 pr... 43 0.046 AL672276_11(AL672276|pid:none) Mouse DNA sequence from clone RP2... 43 0.046 AM270328_4(AM270328|pid:none) Aspergillus niger contig An15c0010... 43 0.046 (Q9JJI6) RecName: Full=GPI ethanolamine phosphate transferase 3;... 43 0.046 CP000656_3437(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 43 0.046 AL672276_12(AL672276|pid:none) Mouse DNA sequence from clone RP2... 43 0.046 CR626927_322(CR626927|pid:none) Bacteroides fragilis NCTC 9343, ... 43 0.046 CP000817_1597(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 43 0.046 AP006841_382(AP006841|pid:none) Bacteroides fragilis YCH46 DNA, ... 43 0.046 AM920428_193(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 42 0.060 AM476759_1(AM476759|pid:none) Vitis vinifera contig VV78X154932.... 42 0.060 FN357333_27(FN357333|pid:none) Schistosoma mansoni genome sequen... 42 0.079 BC161087_1(BC161087|pid:none) Xenopus tropicalis hypothetical pr... 42 0.079 CR378675_176(CR378675|pid:none) Photobacterium profundum SS9 chr... 42 0.079 FN392319_1165(FN392319|pid:none) Pichia pastoris GS115 chromosom... 42 0.079 AC006592_5(AC006592|pid:none) Arabidopsis thaliana chromosome 2 ... 42 0.10 CP001133_1186(CP001133|pid:none) Vibrio fischeri MJ11 chromosome... 41 0.13 (Q8TGB2) RecName: Full=GPI ethanolamine phosphate transferase 2;... 41 0.13 AB020686_1(AB020686|pid:none) Homo sapiens mRNA for KIAA0879 pro... 41 0.18 CP000487_1055(CP000487|pid:none) Campylobacter fetus subsp. fetu... 41 0.18 CP001574_172(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 40 0.23 (P40367) RecName: Full=GPI ethanolamine phosphate transferase 2;... 40 0.23 AF348498_1(AF348498|pid:none) Candida albicans strain SC5314 put... 40 0.30 FN313840_1(FN313840|pid:none) Schistosoma japonicum isolate Anhu... 40 0.30 CP001095_628(CP001095|pid:none) Bifidobacterium longum subsp. in... 40 0.30 CP000594_327(CP000594|pid:none) Ostreococcus lucimarinus CCE9901... 40 0.39 FM178380_1028(FM178380|pid:none) Aliivibrio salmonicida LFI1238 ... 39 0.51 CP001114_1791(CP001114|pid:none) Deinococcus deserti VCD115, com... 39 0.51 FM992688_474(FM992688|pid:none) Candida dubliniensis CD36 chromo... 39 0.67 CT005263_33(CT005263|pid:none) Leishmania major strain Friedlin,... 39 0.67 AM039952_2985(AM039952|pid:none) Xanthomonas campestris pv. vesi... 39 0.87 BX294136_142(BX294136|pid:none) Rhodopirellula baltica SH 1 comp... 39 0.87 CP000088_2119(CP000088|pid:none) Thermobifida fusca YX, complete... 39 0.87 CP000140_1629(CP000140|pid:none) Parabacteroides distasonis ATCC... 39 0.87 CP000099_3170(CP000099|pid:none) Methanosarcina barkeri str. Fus... 38 1.1 CR626927_1146(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 38 1.1 CU468135_3118(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 38 1.1 AP006841_1257(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 38 1.1 BC114325_1(BC114325|pid:none) Danio rerio similar to ectonucleot... 38 1.5 AL928938_2(AL928938|pid:none) Zebrafish DNA sequence from clone ... 38 1.5 AM494961_34(AM494961|pid:none) Leishmania braziliensis chromosom... 37 1.9 AP011115_5259(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 37 1.9 CR940347_994(CR940347|pid:none) Theileria annulata strain Ankara... 37 1.9 AP008957_1138(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 37 1.9 CR940348_295(CR940348|pid:none) Theileria annulata strain Ankara... 37 1.9 DQ303408_1(DQ303408|pid:none) Uncultured bacterium clone ACX6.71... 37 1.9 AE016796_154(AE016796|pid:none) Vibrio vulnificus CMCP6 chromoso... 37 2.5 BA000038_670(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, chr... 37 2.5 CP000462_3836(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 37 2.5 CP000076_4329(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 37 2.5 CP000388_1828(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 36 4.3 CP000949_1273(CP000949|pid:none) Pseudomonas putida W619, comple... 36 4.3 CP000644_3760(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 36 5.7 BX294144_261(BX294144|pid:none) Rhodopirellula baltica SH 1 comp... 36 5.7 BC110878_1(BC110878|pid:none) Homo sapiens phosphatidylinositol ... 36 5.7 CR940352_597(CR940352|pid:none) Theileria annulata strain Ankara... 36 5.7 AE010299_3280(AE010299|pid:none) Methanosarcina acetivorans str.... 36 5.7 (Q5RAC0) RecName: Full=Ectonucleotide pyrophosphatase/phosphodie... 36 5.7 CT573326_1311(CT573326|pid:none) Pseudomonas entomophila str. L4... 35 7.4 BA000032_353(BA000032|pid:none) Vibrio parahaemolyticus RIMD 221... 35 7.4 CP000926_1308(CP000926|pid:none) Pseudomonas putida GB-1, comple... 35 9.7 BC171967_1(BC171967|pid:none) Mus musculus ectonucleotide pyroph... 35 9.7 CP000505_1552(CP000505|pid:none) Thermofilum pendens Hrk 5, comp... 35 9.7 CP000083_2899(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 35 9.7 X81888_1(X81888|pid:none) M.persicae mRNA for nicotinic acetylch... 35 9.7 AK144474_1(AK144474|pid:none) Mus musculus adult male intestinal... 35 9.7 CP000712_3941(CP000712|pid:none) Pseudomonas putida F1, complete... 35 9.7
>AB030279_1(AB030279|pid:none) Mus musculus Pig-n mRNA for phosphatidylinositolglycan class N, complete cds. Length = 931
Score = 377 bits (969), Expect(2) = e-106 Identities = 181/293 (61%), Positives = 233/293 (79%), Gaps = 3/293 (1%) Frame = +2
Query: 146 ILVIVLIGIIFHAVFTLSIFDIYFRSPLVHGMTPHPINLPAPAKRLVLFVADGLRADKFF 325 +L+ +G++ H VF +SIFDIYF SPLVHGMTP LP PAKRLVLFVADGLRAD + Sbjct: 1 MLLFFALGLLIHFVFFVSIFDIYFTSPLVHGMTPQFTPLPPPAKRLVLFVADGLRADTLY 60
Query: 326 EIDENTGKSRSPFLRNIIENKGTWGISHTRVPTETRPGHVALIAGFYEDVSAVTKGWKAN 505 E+DE+ G SR+PF+RN+I ++G+WG+SHTRVPTE+RPGHVALIAGFYEDVSAV KGWK N Sbjct: 61 ELDED-GNSRAPFIRNVIMHEGSWGVSHTRVPTESRPGHVALIAGFYEDVSAVAKGWKEN 119
Query: 506 PVEFDHLFNETTYSFGYGSPDVLPMFSEGV--PHMQSESYPEEAEDF-ASDASKLDTWVF 676 PVEFD LFNE+ Y++ +GSPD+LPMF++G H+ + SY + EDF A DA+KLDTWVF Sbjct: 120 PVEFDSLFNESKYTWSWGSPDILPMFAKGASGDHVYTYSYDAQREDFGAHDATKLDTWVF 179
Query: 677 DKVQQLLLNASTNDQELNRKLRSDKVSIFLHLLGLDTNGHAYRPNSKEYFDNIALVDRGI 856 DKV+ +A+ N+Q L K+ +KV FLHLLG+DTNGHA+RP+S+EY DNI VD G+ Sbjct: 180 DKVKD-FFDAARNNQSLFTKVNEEKVVFFLHLLGVDTNGHAHRPSSREYKDNIKKVDDGV 238
Query: 857 EKIVKLIEDFYGNDGKTAFVFTADHGMSNRGSHGDGERANTETPLVVWGSGVE 1015 ++IV + + FYG+DGKTAF+FT+DHGM++ GSHG G + T TP V WG+G++ Sbjct: 239 KEIVSIFKHFYGDDGKTAFIFTSDHGMTDWGSHGAGHPSETLTPFVTWGAGIK 291
Score = 32.7 bits (73), Expect(2) = e-106 Identities = 17/37 (45%), Positives = 22/37 (59%) Frame = +3
Query: 1113 WKLSSLFRSDVSQADIAPLMTSXXXX*SFNSIPFIIN 1223 W+L + R DV+QADIAPLM S +PF +N Sbjct: 309 WRLENWKRRDVNQADIAPLMASLI------GVPFPLN 339
Score = 118 bits (296), Expect = 7e-25 Identities = 56/115 (48%), Positives = 75/115 (65%) Frame = +1
Query: 1414 DIRRAIFYIFFCYVGFFGVGNIASISSFEISSTYRFTTIFRPFLMGAXXXXXXXXXXXXX 1593 DIRRA F +FF FFG GNIASI+SF+++S Y F T+F PF+MGA Sbjct: 783 DIRRAFFLVFFLLTAFFGTGNIASINSFDLASVYCFLTVFSPFMMGALMMWKILIPFVLV 842
Query: 1594 AISFSLLNNNLNVPRPGSFLIVIALTDIMSINFFFLVKDTGSWLEIGVSISHYAI 1758 +F + + G FL+V+ ++DIM+++FFFLVKD+GSWL+IG SISHY I Sbjct: 843 MCAFEAVQITTQLSSKGLFLVVLIISDIMALHFFFLVKDSGSWLDIGTSISHYVI 897
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3204285 Number of Hits to DB: 2,808,306,389 Number of extensions: 57024783 Number of successful extensions: 182331 Number of sequences better than 10.0: 150 Number of HSP's gapped: 181914 Number of HSP's successfully gapped: 190 Length of query: 640 Length of database: 1,040,966,779 Length adjustment: 135 Effective length of query: 505 Effective length of database: 608,388,304 Effective search space: 307236093520 Effective search space used: 307236093520 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
1 |
VH (FL, L) |
0 |
VF (FL, S) |
0 |
AH (FL, L) |
3 |
AF (FL, S) |
0 |
SL (DIR, L) |
0 |
SS (DIR, S) |
0 |
SH (FL, L) |
2 |
SF (FL, S) |
0 |
CH (FL, L) |
8 |
CF (FL, S) |
1 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |