Contig-U11228-1
Contig ID Contig-U11228-1
Contig update 2002.12.18
Contig sequence
>Contig-U11228-1 (Contig-U11228-1Q) /CSM_Contig/Contig-U11228-1Q.Seq.d
TTGGCCTACTGGAATAACTAAAAAAAAATATAAAATAATAATAATAAAAA
TGTATCATATTATTTCGTCAAACATAAATAATATTAATAATAAATCAAAT
AAACCGAATGATAATAAAAATGATAAAACTAAATTTAATTCAAAGATCTT
AGTGATTGTATTGATTGGTATAATATTCCATGCAGTATTCACATTAAGTA
TTTTTGATATCTATTTCAGATCACCATTAGTACATGGGATGACACCACAT
CCTATTAATTTACCAGCTCCAGCAAAAAGATTAGTTTTATTTGTTGCTGA
TGGATTAAGAGCAGATAAATTTTTTGAAATTGATGAAAATACAGGTAAAT
CTAGATCACCATTTTTAAGAAATATAATTGAAAATAAAGGAACATGGGGT
ATTTCACATACAAGAGTACCAACAGAGACAAGACCAGGACATGTTGCATT
GATAGCAGGTTTCTATGAAGATGTTAGTGCGGTTACAAAGGGATGGAAAG
CGAATCCCGTAGAATTTGATCATCTTTTCAATGAAACTACCTATTCATTT
GGTTATGGTAGTCCAGATGTTTTACCAATGTTTTCAGAAGGTGTACCACA
TATGCAATCAGAATCCTATCCAGAGGAAGCAGAGGATTTCGCATCAGATG
CATCAAAATTGGACACTTGGGTATTTGATAAAGTTCAACAATTACTATTA
AATGCCTCAACCAATGATCAAGAATTGAACAGAAAGTTACGTTCAGATAA
AGTATCAATATTCTTACATTTATTAGGTTTGGATACAAATGGTCATGCAT
ATAGACCAAATTCAAAGGAATATTTTGATAATATTGCTTTGGTAGATAGA
GGCATTGAAAAGATAGTAAAGTTAATCGAAGATTTCTATGGTAATGATGG
TAAGACAGCATTTGTTTTCACTGCAGATCATGGTATGAGCAATAGAGGTT
CACATGGTGATGGTGAACGTGCAAACACAGAGACACCATTAGTCGTATGG
GGTAGTGGTGTGGAGAGGTCCGTTATCATCAGATCTTCAAATGGAGAGAA
TTGCATCACTTCGTGGCAAAGCAAAGGAGATGTTACCAGTTAATGTAGAA
ACACCAACCAATTGGAAACTATCATCATTGTTCCGATCAGATGTATCACA
GGCCGATATTGCACCATTGATGACCTCATT----------TAGTCTTTCA
ATTCCATTCCTTTTATTATCAATCTCTTATGAAGTACTCTTTTTTGGAAA
TTTAATTTTAAATTTAACACTTTGGATGTATTTTGAATTAAAGGTTGATA
ATGATCATACAATTCCAAAATTAGTTTCAATAACTCCAAATTCTGAACCT
TCAACTTCTCTTTCTTTCTCAAAATCTGCTTCAAAATCAAATTTAATGAA
TATTACTCAACATGATATCAGAAGAGCTATATTTTATATTTTCTTTTGCT
ATGTAGGATTTTTTGGAGTTGGTAATATCGCAAGTATAAGTAGTTTTGAA
ATTTCATCAACTTATAGATTTACAACCATTTTTAGACCATTTTTAATGGG
TGCATTATTATTGGTAAAGATTTTCATTCCATTATTATTGGTAGCAATTT
CATTCTCTTTGTTGAATAACAATTTGAATGTTCCAAGACCTGGTAGTTTC
TTAATTGTAATTGCCTTAACCGATATAATGAGTATCAATTTCTTTTTCTT
GGTTAAAGATACTGGTAGTTGGTTAGAAATTGGTGTTAGTATTAGCCATT
ATGCAATTTCAAACGCTTTTATTATACTTCAATTATTATTATTCGCCGTT
TCCGCTTTATTAGTACCAACAACATTAAAATATATTAATAATAATAGTAA
TAATAATAACAATACAATAAAATCAAAATAAATTTAAAACAATTAAAATA
AAATATATATTAAAAAAAAA

Gap gap included
Contig length 1910
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 1890716
End point 1892614
Strand (PLUS/MINUS) PLUS
Number of clones 15
Number of EST 23
Link to clone list U11228
List of clone(s)

est1=AHK229F,1,556
est2=CHR430F,9,555
est3=CHK351F,10,471
est4=CHR776F,10,470
est5=AHC385F,13,612
est6=SHL892F,16,622
est7=SHL677F,29,555
est8=AHI564F,32,624
est9=CHJ751F,108,473
est10=CHF316F,274,625
est11=CHF356F,511,1180
est12=CHJ630F,571,1092
est13=AHI564Z,1181,1890
est14=CHF316Z,1181,1897
est15=CHF356Z,1182,1825
est16=AHC385Z,1183,1897
est17=CHR468Z,1183,1895
est18=AHK229Z,1184,1883
est19=CFH470Z,1184,1894
est20=SHL677Z,1340,1895
est21=CHJ630Z,1374,1897
est22=VSD327F,1400,1911
est23=VSD327Z,1400,1883
Translated Amino Acid sequence
glle*lkknik****kciilfrqt*iiliinqinrmiikmiklnliqrs**ly*lv*ysm
qysh*vflisisdhh*ymg*hhilliyqlqqkd*fylllmd*eqinflklmkiqvnldhh
f*ei*lkikehgvfhiqeyqqrqdqdmlh**qvsmkmlvrlqrdgkrip*nliifsmklp
ihlvmvvqmfyqcfqkvyhicnqnpiqrkqrishqmhqnwtlgylikfnnyy*mpqpmik
n*tesyvqikyqysyiy*vwiqmvmhidqiqrniliillw*iealkr**s*skismvmmv
rqhlfslqimv*aievhmvmvnvqtqrhh*SYGVVVWRGPLSSDLQMERIASLRGKAKEM
LPVNVETPTNWKLSSLFRSDVSQADIAPLMTS---

---SLSIPFLLLSISYEVLFFGNLILNLTLWMYFELKVDNDHTIPKLVSITPNSEPSTSL
SFSKSASKSNLMNITQHDIRRAIFYIFFCYVGFFGVGNIASISSFEISSTYRFTTIFRPF
LMGALLLVKIFIPLLLVAISFSLLNNNLNVPRPGSFLIVIALTDIMSINFFFLVKDTGSW
LEIGVSISHYAISNAFIILQLLLFAVSALLVPTTLKYINNNSNNNNNTIKSK*i*nn*nk
iyikkk


Translated Amino Acid sequence (All Frames)
Frame A:
laywnn*kki*nnnnknvsyyfvkhk*y***ik*te***k**n*i*fkdlsdcidwynip
csihikyf*ylfqitistwddttsy*ftssskkisficc*wiksr*if*n**kyr*i*it
ifkkyn*k*rnmgyftykstnrdktrtccidsrfl*rc*cgykgmesesrri*ssfq*ny
lfiwlw*srcftnvfrrcttyairilsrgsrgfrircikighlgi**sstitikclnq*s
rieqkvtfr*siniltfirfgykwsci*tkfkgif**ycfgr*rh*kdskvnrrflw**w
*dsicfhcrswyeq*rftw*w*tckhrdtisrmg*wcgevryhqifkwrelhhfvakqrr
cyqlm*khqpignyhhcsdqmyhrpilhh**ph---

---*sfnsipfiinll*stlfwkfnfkfntldvf*ikg***synskisfnnskf*tfnfs
fflkicfkikfneyyst*yqksyilyflllcrifwsw*yrkyk*f*nfinl*iynhf*ti
fngciiigkdfhsiiigsnfilfve*qfecsktw*flncnclnryneyqflflg*ryw*l
vrnwc*y*plcnfkrfyytsiiiirrfrfistnnikiy********qynkikinlkqlk*
niy*kk

Frame B:
wptgitkkkykiiiikmyhiissninninnksnkpndnkndktkfnskilvivligiifh
avftlsifdiyfrsplvhgmtphpinlpapakrlvlfvadglradkffeidentgksrsp
flrniienkgtwgishtrvptetrpghvaliagfyedvsavtkgwkanpvefdhlfnett
ysfgygspdvlpmfsegvphmqsesypeeaedfasdaskldtwvfdkvqqlllnastndq
elnrklrsdkvsiflhllgldtnghayrpnskeyfdnialvdrgiekivkliedfygndg
ktafvftadhgmsnrgshgdgerantetplvvwgsgversviirssngencitswqskgd
vts*crntnqletiiivpircitgryctiddli---

---SLSIPFLLLSISYEVLFFGNLILNLTLWMYFELKVDNDHTIPKLVSITPNSEPSTSL
SFSKSASKSNLMNITQHDIRRAIFYIFFCYVGFFGVGNIASISSFEISSTYRFTTIFRPF
LMGALLLVKIFIPLLLVAISFSLLNNNLNVPRPGSFLIVIALTDIMSINFFFLVKDTGSW
LEIGVSISHYAISNAFIILQLLLFAVSALLVPTTLKYINNNSNNNNNTIKSK*i*nn*nk
iyikkk

Frame C:
glle*lkknik****kciilfrqt*iiliinqinrmiikmiklnliqrs**ly*lv*ysm
qysh*vflisisdhh*ymg*hhilliyqlqqkd*fylllmd*eqinflklmkiqvnldhh
f*ei*lkikehgvfhiqeyqqrqdqdmlh**qvsmkmlvrlqrdgkrip*nliifsmklp
ihlvmvvqmfyqcfqkvyhicnqnpiqrkqrishqmhqnwtlgylikfnnyy*mpqpmik
n*tesyvqikyqysyiy*vwiqmvmhidqiqrniliillw*iealkr**s*skismvmmv
rqhlfslqimv*aievhmvmvnvqtqrhh*SYGVVVWRGPLSSDLQMERIASLRGKAKEM
LPVNVETPTNWKLSSLFRSDVSQADIAPLMTS---

---vfqfhsfyyqslmkysflei*f*i*hfgciln*rlimiiqfqn*fq*lqilnlqllf
lsqnllqnqi**illnmiseelyfifsfam*dflelvisqv*vvlkfhqlidlqpfldhf
*wvhyyw*rfsfhyyw*qfhslc*iti*mfqdlvvs*l*lp*pi**vsisfswlkilvvg
*klvlvlaimqfqtlllyfnyyyspfply*yqqh*niliiiviiitiq*nqnkfktikik
yilkk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U11228-1 (Contig-U11228-1Q)
/CSM_Contig/Contig-U11228-1Q.Seq.d
(1920 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U11228-1 (Contig-U11228-1Q) /CSM_Contig/Conti... 3305 0.0
Contig-U06053-1 (Contig-U06053-1Q) /CSM_Contig/Conti... 44 6e-04
Contig-U13898-1 (Contig-U13898-1Q) /CSM_Contig/Conti... 40 0.009
Contig-U14308-1 (Contig-U14308-1Q) /CSM_Contig/Conti... 38 0.035
Contig-U12922-1 (Contig-U12922-1Q) /CSM_Contig/Conti... 36 0.14
Contig-U12462-1 (Contig-U12462-1Q) /CSM_Contig/Conti... 36 0.14
Contig-U11910-1 (Contig-U11910-1Q) /CSM_Contig/Conti... 36 0.14
Contig-U10406-1 (Contig-U10406-1Q) /CSM_Contig/Conti... 36 0.14
Contig-U10372-1 (Contig-U10372-1Q) /CSM_Contig/Conti... 36 0.14
Contig-U14490-1 (Contig-U14490-1Q) /CSM_Contig/Conti... 34 0.54

>Contig-U11228-1 (Contig-U11228-1Q) /CSM_Contig/Contig-U11228-1Q.Seq.d
Length = 1920

Score = 3305 bits (1667), Expect = 0.0
Identities = 1697/1697 (100%)
Strand = Plus / Plus


Query: 129 ctaaatttaattcaaagatcttagtgattgtattgattggtataatattccatgcagtat 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ctaaatttaattcaaagatcttagtgattgtattgattggtataatattccatgcagtat 188


Query: 189 tcacattaagtatttttgatatctatttcagatcaccattagtacatgggatgacaccac 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tcacattaagtatttttgatatctatttcagatcaccattagtacatgggatgacaccac 248


Query: 249 atcctattaatttaccagctccagcaaaaagattagttttatttgttgctgatggattaa 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 atcctattaatttaccagctccagcaaaaagattagttttatttgttgctgatggattaa 308


Query: 309 gagcagataaattttttgaaattgatgaaaatacaggtaaatctagatcaccatttttaa 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gagcagataaattttttgaaattgatgaaaatacaggtaaatctagatcaccatttttaa 368


Query: 369 gaaatataattgaaaataaaggaacatggggtatttcacatacaagagtaccaacagaga 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gaaatataattgaaaataaaggaacatggggtatttcacatacaagagtaccaacagaga 428


Query: 429 caagaccaggacatgttgcattgatagcaggtttctatgaagatgttagtgcggttacaa 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 caagaccaggacatgttgcattgatagcaggtttctatgaagatgttagtgcggttacaa 488


Query: 489 agggatggaaagcgaatcccgtagaatttgatcatcttttcaatgaaactacctattcat 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 agggatggaaagcgaatcccgtagaatttgatcatcttttcaatgaaactacctattcat 548


Query: 549 ttggttatggtagtccagatgttttaccaatgttttcagaaggtgtaccacatatgcaat 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ttggttatggtagtccagatgttttaccaatgttttcagaaggtgtaccacatatgcaat 608


Query: 609 cagaatcctatccagaggaagcagaggatttcgcatcagatgcatcaaaattggacactt 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 cagaatcctatccagaggaagcagaggatttcgcatcagatgcatcaaaattggacactt 668


Query: 669 gggtatttgataaagttcaacaattactattaaatgcctcaaccaatgatcaagaattga 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gggtatttgataaagttcaacaattactattaaatgcctcaaccaatgatcaagaattga 728


Query: 729 acagaaagttacgttcagataaagtatcaatattcttacatttattaggtttggatacaa 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 acagaaagttacgttcagataaagtatcaatattcttacatttattaggtttggatacaa 788


Query: 789 atggtcatgcatatagaccaaattcaaaggaatattttgataatattgctttggtagata 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 atggtcatgcatatagaccaaattcaaaggaatattttgataatattgctttggtagata 848


Query: 849 gaggcattgaaaagatagtaaagttaatcgaagatttctatggtaatgatggtaagacag 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 gaggcattgaaaagatagtaaagttaatcgaagatttctatggtaatgatggtaagacag 908


Query: 909 catttgttttcactgcagatcatggtatgagcaatagaggttcacatggtgatggtgaac 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 catttgttttcactgcagatcatggtatgagcaatagaggttcacatggtgatggtgaac 968


Query: 969 gtgcaaacacagagacaccattagtcgtatggggtagtggtgtggagaggtccgttatca 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 gtgcaaacacagagacaccattagtcgtatggggtagtggtgtggagaggtccgttatca 1028


Query: 1029 tcagatcttcaaatggagagaattgcatcacttcgtggcaaagcaaaggagatgttacca 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 tcagatcttcaaatggagagaattgcatcacttcgtggcaaagcaaaggagatgttacca 1088


Query: 1089 gttaatgtagaaacaccaaccaattggaaactatcatcattgttccgatcagatgtatca 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 gttaatgtagaaacaccaaccaattggaaactatcatcattgttccgatcagatgtatca 1148


Query: 1149 caggccgatattgcaccattgatgacctcattnnnnnnnnnntagtctttcaattccatt 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1149 caggccgatattgcaccattgatgacctcattnnnnnnnnnntagtctttcaattccatt 1208


Query: 1209 ccttttattatcaatctcttatgaagtactcttttttggaaatttaattttaaatttaac 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1209 ccttttattatcaatctcttatgaagtactcttttttggaaatttaattttaaatttaac 1268


Query: 1269 actttggatgtattttgaattaaaggttgataatgatcatacaattccaaaattagtttc 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1269 actttggatgtattttgaattaaaggttgataatgatcatacaattccaaaattagtttc 1328


Query: 1329 aataactccaaattctgaaccttcaacttctctttctttctcaaaatctgcttcaaaatc 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1329 aataactccaaattctgaaccttcaacttctctttctttctcaaaatctgcttcaaaatc 1388


Query: 1389 aaatttaatgaatattactcaacatgatatcagaagagctatattttatattttcttttg 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1389 aaatttaatgaatattactcaacatgatatcagaagagctatattttatattttcttttg 1448


Query: 1449 ctatgtaggattttttggagttggtaatatcgcaagtataagtagttttgaaatttcatc 1508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1449 ctatgtaggattttttggagttggtaatatcgcaagtataagtagttttgaaatttcatc 1508


Query: 1509 aacttatagatttacaaccatttttagaccatttttaatgggtgcattattattggtaaa 1568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1509 aacttatagatttacaaccatttttagaccatttttaatgggtgcattattattggtaaa 1568


Query: 1569 gattttcattccattattattggtagcaatttcattctctttgttgaataacaatttgaa 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1569 gattttcattccattattattggtagcaatttcattctctttgttgaataacaatttgaa 1628


Query: 1629 tgttccaagacctggtagtttcttaattgtaattgccttaaccgatataatgagtatcaa 1688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1629 tgttccaagacctggtagtttcttaattgtaattgccttaaccgatataatgagtatcaa 1688


Query: 1689 tttctttttcttggttaaagatactggtagttggttagaaattggtgttagtattagcca 1748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1689 tttctttttcttggttaaagatactggtagttggttagaaattggtgttagtattagcca 1748


Query: 1749 ttatgcaatttcaaacgcttttattatacttcaattattattattcgccgtttccgcttt 1808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1749 ttatgcaatttcaaacgcttttattatacttcaattattattattcgccgtttccgcttt 1808


Query: 1809 attagtaccaacaacat 1825
|||||||||||||||||
Sbjct: 1809 attagtaccaacaacat 1825


Score = 36.2 bits (18), Expect = 0.14
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 1 ttggcctactggaataac 18
||||||||||||||||||
Sbjct: 1 ttggcctactggaataac 18


>Contig-U06053-1 (Contig-U06053-1Q) /CSM_Contig/Contig-U06053-1Q.Seq.d
Length = 632

Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 1380 ttcaaaatcaaatttaatgaat 1401
||||||||||||||||||||||
Sbjct: 456 ttcaaaatcaaatttaatgaat 477


>Contig-U13898-1 (Contig-U13898-1Q) /CSM_Contig/Contig-U13898-1Q.Seq.d
Length = 1283

Score = 40.1 bits (20), Expect = 0.009
Identities = 20/20 (100%)
Strand = Plus / Minus


Query: 1358 ctctttctttctcaaaatct 1377
||||||||||||||||||||
Sbjct: 458 ctctttctttctcaaaatct 439


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 37,322
Number of Sequences: 6905
Number of extensions: 37322
Number of successful extensions: 3668
Number of sequences better than 10.0: 359
length of query: 1920
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1904
effective length of database: 5,564,391
effective search space: 10594600464
effective search space used: 10594600464
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.23
Homology vs DNA
Query= Contig-U11228-1 (Contig-U11228-1Q) /CSM_Contig/Contig-U11228-1Q.Seq.d
(1920 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ364721) Dictyostelium discoideum cDNA clone:ddc32p13, 5' ... 1322 0.0 1
(BJ409087) Dictyostelium discoideum cDNA clone:dds47p24, 3' ... 1259 0.0 1
(BJ378589) Dictyostelium discoideum cDNA clone:ddc32p03, 3' ... 1259 0.0 1
(BJ353017) Dictyostelium discoideum cDNA clone:dda48o15, 3' ... 1259 0.0 1
(BJ385926) Dictyostelium discoideum cDNA clone:ddc56h18, 3' ... 1255 0.0 1
(BJ349247) Dictyostelium discoideum cDNA clone:dda35j21, 3' ... 1255 0.0 1
(BJ373083) Dictyostelium discoideum cDNA clone:ddc15l18, 3' ... 1253 0.0 1
(BJ378749) Dictyostelium discoideum cDNA clone:ddc32p13, 3' ... 1227 0.0 2
(BJ353765) Dictyostelium discoideum cDNA clone:dda51i08, 3' ... 674 0.0 2
(BJ367104) Dictyostelium discoideum cDNA clone:ddc41k08, 5' ... 876 0.0 2
(BJ335037) Dictyostelium discoideum cDNA clone:dda48o15, 5' ... 952 0.0 1
(BJ409052) Dictyostelium discoideum cDNA clone:dds47i20, 3' ... 944 0.0 1
(BJ397841) Dictyostelium discoideum cDNA clone:dds47h24, 5' ... 942 0.0 1
(BJ331554) Dictyostelium discoideum cDNA clone:dda35j21, 5' ... 922 0.0 1
(BJ381395) Dictyostelium discoideum cDNA clone:ddc41k08, 3' ... 868 0.0 1
(AU263847) Dictyostelium discoideum vegetative cDNA clone:VS... 825 0.0 1
(AU263846) Dictyostelium discoideum vegetative cDNA clone:VS... 825 0.0 1
(BJ335735) Dictyostelium discoideum cDNA clone:dda51i08, 5' ... 809 0.0 2
(BJ397843) Dictyostelium discoideum cDNA clone:dds47i20, 5' ... 815 0.0 1
(BJ371035) Dictyostelium discoideum cDNA clone:ddc56l08, 5' ... 815 0.0 1
(BJ397875) Dictyostelium discoideum cDNA clone:dds47p24, 5' ... 811 0.0 1
(BJ364577) Dictyostelium discoideum cDNA clone:ddc32p03, 5' ... 698 0.0 1
(BJ367393) Dictyostelium discoideum cDNA clone:ddc42f13, 5' ... 648 0.0 1
(BJ371400) Dictyostelium discoideum cDNA clone:ddc57h19, 5' ... 646 0.0 1
(BJ367146) Dictyostelium discoideum cDNA clone:ddc41f13, 5' ... 632 e-176 1
(AB030280) Mus musculus Pig-n mRNA for phosphatidylinositolg... 62 5e-18 5
(BC021148) Mus musculus phosphatidylinositol glycan anchor b... 62 2e-17 5
(AB030279) Mus musculus Pig-n mRNA for phosphatidylinositolg... 62 2e-17 5
(AK165971) Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-l... 62 3e-17 4
(CO734184) SlLH03c07p22f1 squirrel heart library 1 Spermophi... 50 2e-16 4
(BI658990) 603301318F1 NCI_CGAP_Mam4 Mus musculus cDNA clone... 62 2e-16 4
(AR551326) Sequence 6457 from patent US 6747137. 62 1e-15 5
(AK315134) Homo sapiens cDNA, FLJ96099, highly similar to Ho... 46 1e-13 4
(BC028363) Homo sapiens phosphatidylinositol glycan anchor b... 46 2e-13 4
(CQ896542) Sequence 366 from Patent WO2004076614. 46 3e-13 4
(AF109219) Homo sapiens Mcd4p homolog mRNA, complete cds. 46 3e-13 4
(CS476921) Sequence 120 from Patent WO2006133931. 46 4e-13 4
(CS458587) Sequence 120 from Patent EP1734118. 46 4e-13 4
(BZ298841) CG4613.r1 Candida glabrata Random Genomic Library... 70 4e-12 2
(CN833314) AGENCOURT_24959954 NIH_MGC_169 Mus musculus cDNA ... 62 2e-11 2
(EL344856) CCEL12750.b1_K19.ab1 CCE(LMS) endive Cichorium en... 82 2e-11 2
(AB030316) Mus musculus Pig-n gene for phosphatidylinositolg... 62 2e-11 4
(DY294852) IC0AAA86CG03RM1 CitNFL Citrus clementina cDNA 5',... 84 2e-11 1
(DY292438) IC0AAA7DH07RM1 CitNFL Citrus clementina cDNA 5', ... 84 2e-11 1
(DY261328) KN0AAP2YH23FM1 Fruit-TF Citrus clementina cDNA 5'... 84 2e-11 1
(CX290998) C03002G05Rv OF1 Citrus clementina cDNA clone C030... 84 2e-11 1
(EY741215) CS00-C3-705-082-A09-CT.F Sweet orange fruit, deve... 84 2e-11 1
(CQ925022) Sequence 55 from Patent WO2004083403. 46 7e-11 4
(CQ925025) Sequence 58 from Patent WO2004083403. 46 7e-11 4
(CQ925023) Sequence 56 from Patent WO2004083403. 46 8e-11 4
(CQ925024) Sequence 57 from Patent WO2004083403. 46 1e-10 4
(AK014165) Mus musculus 13 days embryo head cDNA, RIKEN full... 62 4e-10 3
(AY416402) Mus musculus PIGN gene, VIRTUAL TRANSCRIPT, parti... 62 1e-09 3
(BQ130453) ij86d04.x1 Human insulinoma Homo sapiens cDNA clo... 46 4e-09 3
(AC166354) Mus musculus BAC clone RP24-283P23 from chromosom... 62 6e-09 5
(BX427310) human full-length cDNA 5-PRIME end of clone CS0DM... 46 8e-09 3
(CU688464) Synthetic construct Homo sapiens gateway clone IM... 46 1e-08 3
(DQ976364) Rattus norvegicus phosphatidylinositol glycan cla... 60 2e-08 2
(CU302360) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8e-08 10
(CV866429) PDUts1030H02 Porcine testis cDNA library I Sus sc... 56 1e-07 2
(CV870506) PDUts1080B07 Porcine testis cDNA library I Sus sc... 56 2e-07 2
(CV870511) PDUts1080B12 Porcine testis cDNA library I Sus sc... 56 2e-07 2
(AC101652) Mus musculus chromosome 1, clone RP23-58D20, comp... 62 2e-07 6
(AM438903) Vitis vinifera contig VV78X066484.4, whole genome... 54 3e-07 5
(CR380959) Candida glabrata strain CBS138 chromosome M compl... 70 3e-07 1
(DA993704) Homo sapiens cDNA clone SYNOV4006284, 5' end, mRN... 46 2e-06 2
(CJ070639) Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-l... 62 1e-05 2
(AC123149) Rattus norvegicus clone CH230-45L6, *** SEQUENCIN... 60 1e-05 7
(BU009156) QGH9K16.yg.ab1 QG_EFGHJ lettuce serriola Lactuca ... 56 2e-05 3
(BQ833651) LL6in11410T7 AFT024-subtracted library Mus muscul... 64 2e-05 1
(DB100215) Homo sapiens cDNA clone TESTI4052071, 5' end, mRN... 46 3e-05 2
(DB227402) Homo sapiens cDNA clone TRACH3019887, 5' end, mRN... 46 4e-05 3
(DA843160) Homo sapiens cDNA clone PLACE6010786, 5' end, mRN... 46 4e-05 2
(DB194536) Homo sapiens cDNA clone TRACH1000215, 5' end, mRN... 46 4e-05 2
(DB091662) Homo sapiens cDNA clone TESTI4041072, 5' end, mRN... 46 4e-05 2
(DB098397) Homo sapiens cDNA clone TESTI4049881, 5' end, mRN... 46 4e-05 2
(DA436807) Homo sapiens cDNA clone CTONG2003883, 5' end, mRN... 46 4e-05 2
(DB238032) Homo sapiens cDNA clone TRACH3033880, 5' end, mRN... 46 4e-05 2
(DN998103) TC110315 Human breast cancer tissue, large insert... 46 4e-05 2
(DR000437) TC106987 Human fetal brain, large insert, pCMV ex... 46 4e-05 2
(AF152004) Stylophora pistillata heat shock protein 70 (HSP7... 56 4e-05 3
(CN356583) 17000531345966 GRN_EB Homo sapiens cDNA 5', mRNA ... 46 5e-05 2
(CX758040) AGENCOURT_40971665 NIH_MGC_279 Homo sapiens cDNA ... 46 5e-05 2
(CK342307) K0422C06-5N NIA Mouse Mesenchymal Stem Cell cDNA ... 62 8e-05 1
(BY713141) Mus musculus 13 days embryo head cDNA, RIKEN full... 62 8e-05 1
(BG242522) 602354327F1 NCI_CGAP_Mam1 Mus musculus cDNA clone... 62 8e-05 1
(BB872848) Mus musculus cDNA, RIKEN full-length enriched lib... 62 8e-05 1
(BB865472) Mus musculus blood RCB-0035 WEHI-3 cDNA, RIKEN fu... 62 8e-05 1
(BC111233) Bos taurus cDNA clone IMAGE:8066506, with apparen... 36 1e-04 4
(DQ331948) Synthetic construct Saccharomyces cerevisiae clon... 40 2e-04 3
(DI166690) Methods of screening for compounds that inhibit t... 40 2e-04 3
(DI156988) Methods of screening for compounds that inhibit t... 40 2e-04 3
(DI131518) Methods of screening for compounds that inhibit t... 40 2e-04 3
(DD346397) Methods of screening for compounds that inhibit t... 40 2e-04 3
(CQ824275) Sequence 30 from Patent WO2004048567. 40 2e-04 3
(BM488010) pgm2n.pk006.e15 Normalized Chicken Breast Muscle,... 60 3e-04 1
(AP002398) Homo sapiens genomic DNA, chromosome 18q21 clone:... 42 4e-04 9
(DB085545) Homo sapiens cDNA clone TESTI4032858, 5' end, mRN... 42 5e-04 2
(DA904941) Homo sapiens cDNA clone SKNMC2005417, 5' end, mRN... 46 5e-04 2
(Z28165) S.cerevisiae chromosome XI reading frame ORF YKL165c. 40 7e-04 3

>(BJ364721) Dictyostelium discoideum cDNA clone:ddc32p13, 5' end,
single read.
Length = 670

Score = 1322 bits (667), Expect = 0.0
Identities = 669/670 (99%)
Strand = Plus / Plus


Query: 511 agaatttgatcatcttttcaatgaaactacctattcatttggttatggtagtccagatgt 570
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaatttgatnatcttttcaatgaaactacctattcatttggttatggtagtccagatgt 60


Query: 571 tttaccaatgttttcagaaggtgtaccacatatgcaatcagaatcctatccagaggaagc 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttaccaatgttttcagaaggtgtaccacatatgcaatcagaatcctatccagaggaagc 120


Query: 631 agaggatttcgcatcagatgcatcaaaattggacacttgggtatttgataaagttcaaca 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaggatttcgcatcagatgcatcaaaattggacacttgggtatttgataaagttcaaca 180


Query: 691 attactattaaatgcctcaaccaatgatcaagaattgaacagaaagttacgttcagataa 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attactattaaatgcctcaaccaatgatcaagaattgaacagaaagttacgttcagataa 240


Query: 751 agtatcaatattcttacatttattaggtttggatacaaatggtcatgcatatagaccaaa 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtatcaatattcttacatttattaggtttggatacaaatggtcatgcatatagaccaaa 300


Query: 811 ttcaaaggaatattttgataatattgctttggtagatagaggcattgaaaagatagtaaa 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcaaaggaatattttgataatattgctttggtagatagaggcattgaaaagatagtaaa 360


Query: 871 gttaatcgaagatttctatggtaatgatggtaagacagcatttgttttcactgcagatca 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttaatcgaagatttctatggtaatgatggtaagacagcatttgttttcactgcagatca 420


Query: 931 tggtatgagcaatagaggttcacatggtgatggtgaacgtgcaaacacagagacaccatt 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggtatgagcaatagaggttcacatggtgatggtgaacgtgcaaacacagagacaccatt 480


Query: 991 agtcgtatggggtagtggtgtggagaggtccgttatcatcagatcttcaaatggagagaa 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agtcgtatggggtagtggtgtggagaggtccgttatcatcagatcttcaaatggagagaa 540


Query: 1051 ttgcatcacttcgtggcaaagcaaaggagatgttaccagttaatgtagaaacaccaacca 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttgcatcacttcgtggcaaagcaaaggagatgttaccagttaatgtagaaacaccaacca 600


Query: 1111 attggaaactatcatcattgttccgatcagatgtatcacaggccgatattgcaccattga 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 attggaaactatcatcattgttccgatcagatgtatcacaggccgatattgcaccattga 660


Query: 1171 tgacctcatt 1180
||||||||||
Sbjct: 661 tgacctcatt 670

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,125,279,497
Number of extensions: 136901769
Number of successful extensions: 11550624
Number of sequences better than 10.0: 269
Length of query: 1920
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1896
Effective length of database: 97,308,875,965
Effective search space: 184497628829640
Effective search space used: 184497628829640
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.29
Homology vs Protein
Query= Contig-U11228-1 (Contig-U11228-1Q) /CSM_Contig/Contig-U11228-1Q.Seq.d
(1920 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AB030279_1(AB030279|pid:none) Mus musculus Pig-n mRNA for phosph... 377 e-106
AB030280_1(AB030280|pid:none) Mus musculus Pig-n mRNA for phosph... 377 e-106
AK315134_1(AK315134|pid:none) Homo sapiens cDNA, FLJ96099, highl... 375 e-106
AB030316_1(AB030316|pid:none) Mus musculus Pig-n gene for phosph... 377 e-106
(Q2U0S9) RecName: Full=GPI ethanolamine phosphate transferase 1;... 352 3e-97
CU638744_520(CU638744|pid:none) Podospora anserina genomic DNA c... 328 4e-90
(Q7SAP1) RecName: Full=GPI ethanolamine phosphate transferase 1;... 326 5e-90
(Q4ILH3) RecName: Full=GPI ethanolamine phosphate transferase 1;... 327 8e-90
(Q6C0Z3) RecName: Full=GPI ethanolamine phosphate transferase 1;... 328 2e-88
(Q6FJ81) RecName: Full=GPI ethanolamine phosphate transferase 1;... 328 4e-88
CP000501_79(CP000501|pid:none) Pichia stipitis CBS 6054 chromoso... 317 8e-87
(Q8WZK2) RecName: Full=GPI ethanolamine phosphate transferase 1;... 319 8e-87
(Q5A3M6) RecName: Full=GPI ethanolamine phosphate transferase 1;... 322 2e-86
FM992688_1126(FM992688|pid:none) Candida dubliniensis CD36 chrom... 322 3e-86
(Q757X5) RecName: Full=GPI ethanolamine phosphate transferase 1;... 318 3e-85
CP001575_229(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 311 2e-83
AP003999_13(AP003999|pid:none) Oryza sativa Japonica Group genom... 301 3e-83
CP000584_115(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 298 8e-82
BT081018_1(BT081018|pid:none) Caligus clemensi clone ccle-evs-51... 298 5e-79
CR954204_135(CR954204|pid:none) Ostreococcus tauri strain OTTH05... 296 1e-78
AC024812_8(AC024812|pid:none) Caenorhabditis elegans cosmid Y54E... 285 3e-75
DQ976364_1(DQ976364|pid:none) Rattus norvegicus phosphatidylinos... 251 5e-65
FN357490_14(FN357490|pid:none) Schistosoma mansoni genome sequen... 235 4e-60
AP008208_1663(AP008208|pid:none) Oryza sativa (japonica cultivar... 229 2e-58
AE014297_4297(AE014297|pid:none) Drosophila melanogaster chromos... 174 1e-41
AY811862_1(AY811862|pid:none) Schistosoma japonicum SJCHGC03961 ... 166 2e-39
AE014297_3343(AE014297|pid:none) Drosophila melanogaster chromos... 162 3e-38
BT001286_1(BT001286|pid:none) Drosophila melanogaster AT09001 fu... 162 5e-38
AK132928_1(AK132928|pid:none) Mus musculus adult male testis cDN... 118 7e-25
AB027957_1(AB027957|pid:none) Schizosaccharomyces pombe gene for... 111 1e-24
AE014297_1361(AE014297|pid:none) Drosophila melanogaster chromos... 86 6e-15
AY812505_1(AY812505|pid:none) Schistosoma japonicum SJCHGC04306 ... 67 2e-09
CR382123_758(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 66 4e-09
T33168(T33168)hypothetical protein M01B12.2 - Caenorhabditis ele... 65 1e-08
FN357476_23(FN357476|pid:none) Schistosoma mansoni genome sequen... 58 1e-06
(Q9NXG5) RecName: Full=GPI ethanolamine phosphate transferase 2;... 57 2e-06
AK074815_1(AK074815|pid:none) Homo sapiens cDNA FLJ90334 fis, cl... 57 2e-06
AY358538_1(AY358538|pid:none) Homo sapiens clone DNA84920 RLGS19... 57 2e-06
(Q6CLN2) RecName: Full=GPI ethanolamine phosphate transferase 2;... 57 3e-06
(Q74ZS2) RecName: Full=GPI ethanolamine phosphate transferase 3;... 56 5e-06
T21487(T21487)hypothetical protein F28C6.4 - Caenorhabditis eleg... 54 2e-05
BT021790_1(BT021790|pid:none) Bos taurus GPI7 protein (GPI7), mR... 54 3e-05
CR626927_3473(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 54 3e-05
AM270196_32(AM270196|pid:none) Aspergillus niger contig An09c007... 53 3e-05
CP000675_1942(CP000675|pid:none) Legionella pneumophila str. Cor... 52 8e-05
AE017354_1823(AE017354|pid:none) Legionella pneumophila subsp. p... 52 8e-05
CR628336_1823(CR628336|pid:none) Legionella pneumophila str. Par... 51 1e-04
CU928169_253(CU928169|pid:none) Kluyveromyces thermotolerans str... 51 2e-04
CU928174_35(CU928174|pid:none) Zygosaccharomyces rouxii strain C... 51 2e-04
(Q6BZ57) RecName: Full=GPI ethanolamine phosphate transferase 2;... 50 2e-04
AK074715_1(AK074715|pid:none) Homo sapiens cDNA FLJ90234 fis, cl... 50 3e-04
AM920435_1236(AM920435|pid:none) Penicillium chrysogenum Wiscons... 50 4e-04
AF003137_9(AF003137|pid:none) Caenorhabditis elegans cosmid C27A... 49 5e-04
AE017348_131(AE017348|pid:none) Cryptococcus neoformans var. neo... 49 8e-04
DQ426543_1(DQ426543|pid:none) Aspergillus fumigatus phosphoethan... 49 8e-04
CP001071_1678(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 48 0.001
CR380953_166(CR380953|pid:none) Candida glabrata strain CBS138 c... 48 0.001
CP000254_628(CP000254|pid:none) Methanospirillum hungatei JF-1, ... 48 0.001
CR954215_257(CR954215|pid:none) Ostreococcus tauri strain OTTH05... 47 0.002
CP000509_1278(CP000509|pid:none) Nocardioides sp. JS614, complet... 47 0.002
AM270078_13(AM270078|pid:none) Aspergillus niger contig An04c017... 47 0.002
(Q6C7Q6) RecName: Full=GPI ethanolamine phosphate transferase 2;... 47 0.002
AF321466_1(AF321466|pid:none) Yarrowia lipolytica putative prote... 47 0.002
AP007164_107(AP007164|pid:none) Aspergillus oryzae RIB40 genomic... 46 0.004
(Q6FPB2) RecName: Full=GPI ethanolamine phosphate transferase 2;... 46 0.004
AJ430585_1(AJ430585|pid:none) Fluoribacter gormanii pafA gene fo... 46 0.004
AB005238_9(AB005238|pid:none) Arabidopsis thaliana genomic DNA, ... 46 0.005
A87794(A87794)protein C27A12.9 [imported] - Caenorhabditis elegans 46 0.005
AP008957_2317(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 45 0.007
(O13663) RecName: Full=GPI ethanolamine phosphate transferase 3;... 45 0.007
CU633900_692(CU633900|pid:none) Podospora anserina genomic DNA c... 45 0.012
CP000511_3166(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 45 0.012
AP004257_11(AP004257|pid:none) Oryza sativa Japonica Group genom... 45 0.012
CP000473_3430(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 44 0.016
BC029271_1(BC029271|pid:none) Homo sapiens phosphatidylinositol ... 44 0.021
AM910996_311(AM910996|pid:none) Plasmodium knowlesi strain H chr... 44 0.021
AC004472_3(AC004472|pid:none) Homo sapiens chromosome 9, P1 clon... 44 0.021
AL353795_4(AL353795|pid:none) Human DNA sequence from clone RP11... 44 0.021
AP007161_518(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 44 0.027
AP008955_22(AP008955|pid:none) Brevibacillus brevis NBRC 100599 ... 44 0.027
CR382136_289(CR382136|pid:none) Debaryomyces hansenii strain CBS... 43 0.035
AE013599_435(AE013599|pid:none) Drosophila melanogaster chromoso... 43 0.035
CP000431_5154(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 43 0.035
AK220315_1(AK220315|pid:none) Mus musculus mRNA for mFLJ00350 pr... 43 0.046
AL672276_11(AL672276|pid:none) Mouse DNA sequence from clone RP2... 43 0.046
AM270328_4(AM270328|pid:none) Aspergillus niger contig An15c0010... 43 0.046
(Q9JJI6) RecName: Full=GPI ethanolamine phosphate transferase 3;... 43 0.046
CP000656_3437(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 43 0.046
AL672276_12(AL672276|pid:none) Mouse DNA sequence from clone RP2... 43 0.046
CR626927_322(CR626927|pid:none) Bacteroides fragilis NCTC 9343, ... 43 0.046
CP000817_1597(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 43 0.046
AP006841_382(AP006841|pid:none) Bacteroides fragilis YCH46 DNA, ... 43 0.046
AM920428_193(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 42 0.060
AM476759_1(AM476759|pid:none) Vitis vinifera contig VV78X154932.... 42 0.060
FN357333_27(FN357333|pid:none) Schistosoma mansoni genome sequen... 42 0.079
BC161087_1(BC161087|pid:none) Xenopus tropicalis hypothetical pr... 42 0.079
CR378675_176(CR378675|pid:none) Photobacterium profundum SS9 chr... 42 0.079
FN392319_1165(FN392319|pid:none) Pichia pastoris GS115 chromosom... 42 0.079
AC006592_5(AC006592|pid:none) Arabidopsis thaliana chromosome 2 ... 42 0.10
CP001133_1186(CP001133|pid:none) Vibrio fischeri MJ11 chromosome... 41 0.13
(Q8TGB2) RecName: Full=GPI ethanolamine phosphate transferase 2;... 41 0.13
AB020686_1(AB020686|pid:none) Homo sapiens mRNA for KIAA0879 pro... 41 0.18
CP000487_1055(CP000487|pid:none) Campylobacter fetus subsp. fetu... 41 0.18
CP001574_172(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 40 0.23
(P40367) RecName: Full=GPI ethanolamine phosphate transferase 2;... 40 0.23
AF348498_1(AF348498|pid:none) Candida albicans strain SC5314 put... 40 0.30
FN313840_1(FN313840|pid:none) Schistosoma japonicum isolate Anhu... 40 0.30
CP001095_628(CP001095|pid:none) Bifidobacterium longum subsp. in... 40 0.30
CP000594_327(CP000594|pid:none) Ostreococcus lucimarinus CCE9901... 40 0.39
FM178380_1028(FM178380|pid:none) Aliivibrio salmonicida LFI1238 ... 39 0.51
CP001114_1791(CP001114|pid:none) Deinococcus deserti VCD115, com... 39 0.51
FM992688_474(FM992688|pid:none) Candida dubliniensis CD36 chromo... 39 0.67
CT005263_33(CT005263|pid:none) Leishmania major strain Friedlin,... 39 0.67
AM039952_2985(AM039952|pid:none) Xanthomonas campestris pv. vesi... 39 0.87
BX294136_142(BX294136|pid:none) Rhodopirellula baltica SH 1 comp... 39 0.87
CP000088_2119(CP000088|pid:none) Thermobifida fusca YX, complete... 39 0.87
CP000140_1629(CP000140|pid:none) Parabacteroides distasonis ATCC... 39 0.87
CP000099_3170(CP000099|pid:none) Methanosarcina barkeri str. Fus... 38 1.1
CR626927_1146(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 38 1.1
CU468135_3118(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 38 1.1
AP006841_1257(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 38 1.1
BC114325_1(BC114325|pid:none) Danio rerio similar to ectonucleot... 38 1.5
AL928938_2(AL928938|pid:none) Zebrafish DNA sequence from clone ... 38 1.5
AM494961_34(AM494961|pid:none) Leishmania braziliensis chromosom... 37 1.9
AP011115_5259(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 37 1.9
CR940347_994(CR940347|pid:none) Theileria annulata strain Ankara... 37 1.9
AP008957_1138(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 37 1.9
CR940348_295(CR940348|pid:none) Theileria annulata strain Ankara... 37 1.9
DQ303408_1(DQ303408|pid:none) Uncultured bacterium clone ACX6.71... 37 1.9
AE016796_154(AE016796|pid:none) Vibrio vulnificus CMCP6 chromoso... 37 2.5
BA000038_670(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, chr... 37 2.5
CP000462_3836(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 37 2.5
CP000076_4329(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 37 2.5
CP000388_1828(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 36 4.3
CP000949_1273(CP000949|pid:none) Pseudomonas putida W619, comple... 36 4.3
CP000644_3760(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 36 5.7
BX294144_261(BX294144|pid:none) Rhodopirellula baltica SH 1 comp... 36 5.7
BC110878_1(BC110878|pid:none) Homo sapiens phosphatidylinositol ... 36 5.7
CR940352_597(CR940352|pid:none) Theileria annulata strain Ankara... 36 5.7
AE010299_3280(AE010299|pid:none) Methanosarcina acetivorans str.... 36 5.7
(Q5RAC0) RecName: Full=Ectonucleotide pyrophosphatase/phosphodie... 36 5.7
CT573326_1311(CT573326|pid:none) Pseudomonas entomophila str. L4... 35 7.4
BA000032_353(BA000032|pid:none) Vibrio parahaemolyticus RIMD 221... 35 7.4
CP000926_1308(CP000926|pid:none) Pseudomonas putida GB-1, comple... 35 9.7
BC171967_1(BC171967|pid:none) Mus musculus ectonucleotide pyroph... 35 9.7
CP000505_1552(CP000505|pid:none) Thermofilum pendens Hrk 5, comp... 35 9.7
CP000083_2899(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 35 9.7
X81888_1(X81888|pid:none) M.persicae mRNA for nicotinic acetylch... 35 9.7
AK144474_1(AK144474|pid:none) Mus musculus adult male intestinal... 35 9.7
CP000712_3941(CP000712|pid:none) Pseudomonas putida F1, complete... 35 9.7

>AB030279_1(AB030279|pid:none) Mus musculus Pig-n mRNA for
phosphatidylinositolglycan class N, complete cds.
Length = 931

Score = 377 bits (969), Expect(2) = e-106
Identities = 181/293 (61%), Positives = 233/293 (79%), Gaps = 3/293 (1%)
Frame = +2

Query: 146 ILVIVLIGIIFHAVFTLSIFDIYFRSPLVHGMTPHPINLPAPAKRLVLFVADGLRADKFF 325
+L+ +G++ H VF +SIFDIYF SPLVHGMTP LP PAKRLVLFVADGLRAD +
Sbjct: 1 MLLFFALGLLIHFVFFVSIFDIYFTSPLVHGMTPQFTPLPPPAKRLVLFVADGLRADTLY 60

Query: 326 EIDENTGKSRSPFLRNIIENKGTWGISHTRVPTETRPGHVALIAGFYEDVSAVTKGWKAN 505
E+DE+ G SR+PF+RN+I ++G+WG+SHTRVPTE+RPGHVALIAGFYEDVSAV KGWK N
Sbjct: 61 ELDED-GNSRAPFIRNVIMHEGSWGVSHTRVPTESRPGHVALIAGFYEDVSAVAKGWKEN 119

Query: 506 PVEFDHLFNETTYSFGYGSPDVLPMFSEGV--PHMQSESYPEEAEDF-ASDASKLDTWVF 676
PVEFD LFNE+ Y++ +GSPD+LPMF++G H+ + SY + EDF A DA+KLDTWVF
Sbjct: 120 PVEFDSLFNESKYTWSWGSPDILPMFAKGASGDHVYTYSYDAQREDFGAHDATKLDTWVF 179

Query: 677 DKVQQLLLNASTNDQELNRKLRSDKVSIFLHLLGLDTNGHAYRPNSKEYFDNIALVDRGI 856
DKV+ +A+ N+Q L K+ +KV FLHLLG+DTNGHA+RP+S+EY DNI VD G+
Sbjct: 180 DKVKD-FFDAARNNQSLFTKVNEEKVVFFLHLLGVDTNGHAHRPSSREYKDNIKKVDDGV 238

Query: 857 EKIVKLIEDFYGNDGKTAFVFTADHGMSNRGSHGDGERANTETPLVVWGSGVE 1015
++IV + + FYG+DGKTAF+FT+DHGM++ GSHG G + T TP V WG+G++
Sbjct: 239 KEIVSIFKHFYGDDGKTAFIFTSDHGMTDWGSHGAGHPSETLTPFVTWGAGIK 291

Score = 32.7 bits (73), Expect(2) = e-106
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +3

Query: 1113 WKLSSLFRSDVSQADIAPLMTSXXXX*SFNSIPFIIN 1223
W+L + R DV+QADIAPLM S +PF +N
Sbjct: 309 WRLENWKRRDVNQADIAPLMASLI------GVPFPLN 339

Score = 118 bits (296), Expect = 7e-25
Identities = 56/115 (48%), Positives = 75/115 (65%)
Frame = +1

Query: 1414 DIRRAIFYIFFCYVGFFGVGNIASISSFEISSTYRFTTIFRPFLMGAXXXXXXXXXXXXX 1593
DIRRA F +FF FFG GNIASI+SF+++S Y F T+F PF+MGA
Sbjct: 783 DIRRAFFLVFFLLTAFFGTGNIASINSFDLASVYCFLTVFSPFMMGALMMWKILIPFVLV 842

Query: 1594 AISFSLLNNNLNVPRPGSFLIVIALTDIMSINFFFLVKDTGSWLEIGVSISHYAI 1758
+F + + G FL+V+ ++DIM+++FFFLVKD+GSWL+IG SISHY I
Sbjct: 843 MCAFEAVQITTQLSSKGLFLVVLIISDIMALHFFFLVKDSGSWLDIGTSISHYVI 897

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,808,306,389
Number of extensions: 57024783
Number of successful extensions: 182331
Number of sequences better than 10.0: 150
Number of HSP's gapped: 181914
Number of HSP's successfully gapped: 190
Length of query: 640
Length of database: 1,040,966,779
Length adjustment: 135
Effective length of query: 505
Effective length of database: 608,388,304
Effective search space: 307236093520
Effective search space used: 307236093520
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.70 gvh: 0.51 alm: 0.17 top: 0.47 tms: 0.33 mit: 0.24 mip: 0.03
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 1.00 m3b: 0.00 m_ : 0.00

48.0 %: endoplasmic reticulum
28.0 %: plasma membrane
16.0 %: mitochondrial
4.0 %: Golgi
4.0 %: nuclear

>> prediction for Contig-U11228-1 is end

VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 3
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 2
SF (FL, S) 0
CH (FL, L) 8
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0