>Contig-U11186-1 (Contig-U11186-1Q) /CSM_Contig/Contig-U11186-1Q.Seq.d
ATGGTTATCAATGTGTCCCATCAATTAAAGAATTATCAAAGAAAACTGAT
AAGGAATTATCATCAGTTCAAGGTTTTACAATTTCAAGAGATGGTTGTGG
TTCAATTTATTTCCCTGGTTCAACAAATTTGGTTGCATTAGGTTTAGATG
ATATCGTTGATATTGAACCAAGAGAAGTATCAGTTTATAAGGATGAAGAA
ACTAAACCAGAGATTGGATATGGTTTGAATCGTGATGCCGTTGTTACATT
GGAGAATTGTTGGCCAAAGAATAAAAATGGTGAAGTAGTTAAAGAGGATG
GTACCATTTTAGATAAATATGAAAATGCCTTAAAGAAAGTTTCTGCTAAA
TCTGATTGTGGTTTCGTTTCTTATTCAAGATCAAATGGTACTTGGGTATT
CACTGTTAAACATTTTAGTAAATATTCAGCACCAGATTTTGATGAAGATG
ATCAACAAATGCAACAACAAACTCAACAAAAACAACAACAAACTCAACCA
TCAAAAGTTACATTTCAACAACCATCAACCAAATTGACTAAACCAAAATT
CACAGCAAATCTCGATAATTTTGACTCTGATTCTGAAACAAGTTCAGGTG
ATGAAAATCAAGATGAAATGGTTCCACAAAAGAAAACACCATTTATTAAA
AGAGTATCAAATAGAGAGTCAGGATTATTTGATACACCATCAGTTGTACC
AATGTCTGAAAAAATTGAAACAACACCATCAAAGATTGCAAGAGTATCGG
AACCAACATCTCAATCGAGTAGAATGAGTAACAACGCATTAAAGTTTTCA
ACATTTAATCCACAACAACAACAACTACAATCATCAAGATTTAAATCTAC
TGGTT----------TTATAAATGAGAAAAGATTAGAAATTTTACATTTA
ATTGCTGGTAGTGTTAATAAGATTTATAAGAATCTAAATGATTGGATTAG
ATGTTTTGCTGTTAGTTTTTGGTTTAAATATTCTTTGGAATATAGTATTG
AAGATTCAGTTGAAAATTTTGAAAGATCTTTCAATGCTCATAGATCAGTT
TATCCATTACCACCTTATTTAATTAAATCAACCTCCACCAATAGTAAACA
AATTGAAGAACAACAACATTATTATGATATTTGTTTCTTGTTATTAAAGT
TATTTGCTGTAAATCGTGGTTCATCACATTTTGATAAGTTTAAGAATATT
TTTTATCCAGAGAATATTGGTCAAGATTTATTGGATTATCATTTATCTTG
GAATTTATATACCGTTTTAAAATCAATTCCATCATTAAACAAACAACCAG
ATCTTGTAAATGCAAGTAACCTTCATAGTTCTTTTGCTTTACAACTTGAA
AGATTAGGTCTATGGCAATGGTCAATCTATGTTTTACTTCATACTCCAGA
CCAATCCAATCATGTTAGAGAAGAAGCTGTCAAATCATTGATCGCTAGAG
CTGCACCAGTTATTACATCAGAAGATAGAGTGTTCCTAACTACAAAATTA
CATATTCCAGAGATTTGGATCGATGAAGCTAAAGCATGGTACTCTGGTTA
CGATTGTAATAATGATATTTATGATCAAATCGATGCTCTCTTCAAGTCAT
ACCAATACACAAAGATTCACGATATCATTTTTTCAAATATTGGTCCAAAC
TATATCATTCAAAAGAGATATCATTCACTCAAAGATTTACTCATTAGATT
GGAGCCTCACTCTTCTTTTATCTCCACTTGGAGATATGGTGGTTCCATCT
TTTTAGAATTTGCCGATATTTGTATTCAATACAAAGAGATACTTTCTCAA
CTCTCCAATACTGCAGAGGAAATTCAACGTACCAAATATTATGTTAACCT
TAAAGATATTACCACTAGAATCGTTAATATCTTATCTGATATTTCAAAAA
TCACTCAATCCTCTGAAATTAAAAATACTAGCGCCTCATACAAACAATCT
CTTTCATTTATGTCTGAAGCTCTCATCACTAAAGCTTCTCTTTTAAGAGA
TCTACCTGAAAGTATTGTAAAATTGGTTTCAACAAATAATTTAGTTTCAA
CTTTAAATTCTTTGCCATTAACTCAAGATTATAGATCTAAAAATTTAGAA
TCTTTAACCGATCAAATTCAAGATACTTTATTAAATTCAATTTATCAATA
AAAAAAAAAATAAATAAATAAAAATTAAAATTAATTTTAAAATTTAAAA

est1=AHM402F,-52,516
est2=AHB319F,23,627
est3=SHK416F,41,624
est4=AHM740F,129,731
est5=AHN536F,187,855
est6=AFA658E,856,2171
est7=AHM740Z,1373,2128
est8=AHB319Z,1395,2128
est9=AHM402Z,1481,2173
est10=AHN536Z,1503,2171
est11=SHK416Z,1538,2172
est12=SSG317E,1605,2190
est13=AHG892Z,1710,2022

GYQCVPSIKELSKKTDKELSSVQGFTISRDGCGSIYFPGSTNLVALGLDDIVDIEPREVS
VYKDEETKPEIGYGLNRDAVVTLENCWPKNKNGEVVKEDGTILDKYENALKKVSAKSDCG
FVSYSRSNGTWVFTVKHFSKYSAPDFDEDDQQMQQQTQQKQQQTQPSKVTFQQPSTKLTK
PKFTANLDNFDSDSETSSGDENQDEMVPQKKTPFIKRVSNRESGLFDTPSVVPMSEKIET
TPSKIARVSEPTSQSSRMSNNALKFSTFNPQQQQLQSSRFKSTG---

---INEKRLEILHLIAGSVNKIYKNLNDWIRCFAVSFWFKYSLEYSIEDSVENFERSFNA
HRSVYPLPPYLIKSTSTNSKQIEEQQHYYDICFLLLKLFAVNRGSSHFDKFKNIFYPENI
GQDLLDYHLSWNLYTVLKSIPSLNKQPDLVNASNLHSSFALQLERLGLWQWSIYVLLHTP
DQSNHVREEAVKSLIARAAPVITSEDRVFLTTKLHIPEIWIDEAKAWYSGYDCNNDIYDQ
IDALFKSYQYTKIHDIIFSNIGPNYIIQKRYHSLKDLLIRLEPHSSFISTWRYGGSIFLE
FADICIQYKEILSQLSNTAEEIQRTKYYVNLKDITTRIVNILSDISKITQSSEIKNTSAS
YKQSLSFMSEALITKASLLRDLPESIVKLVSTNNLVSTLNSLPLTQDYRSKNLESLTDQI
QDTLLNSIYQ*kkk*inkn*n*f*nlk

Frame A:
mvinvshqlknyqrklirnyhqfkvlqfqemvvvqfislvqqiwlh*v*mislilnqeky
qfirmkklnqrldmv*ivmpllhwrivgqrikmvk*lkrmvpf*inmkmp*rkfllnliv
vsfliqdqmvlgysllnilvniqhqilmkminkcnnklnknnnklnhqklhfnnhqpn*l
nqnsqqisiiltlilkqvqvmkikmkwfhkrkhhllkeyqiesqdylihhqlyqclkklk
qhhqrlqeyrnqhlnrve*vtth*sfqhlihnnnnynhqdlnllv---

---l*mrkd*kfyi*llvvlirfiri*migldvlllvfglnilwnivlkiqlkilkdlsm
lidqfihyhli*lnqpppivnklknnniimifvscy*syll*ivvhhilislriffiqri
lvkiywiiiylgiyipf*nqfhh*tnnqil*mqvtfivlllynlkd*vygngqsmfyfil
qtnpimlekklsnh*slelhqllhqkiecs*lqnyifqrfgsmklkhgtlvtivimifmi
ksmlssshtntqrftisffqilvqtisfkrdiihskiysldwsltlllsplgdmvvpsf*
nlpifvfntkryflnspilqrkfnvpnimltlkilpleslisylifqkslnplklkilap
htnnlfhlclklsslkllf*eiylkvl*nwfqqii*fql*ilch*lkiidlki*nl*pik
fkily*iqfinkkknk*ikikinfki*

Frame B:
wlsmcpin*riiken**giiissrfynfkrwlwfnlfpwfnkfgcirfr*yr*y*tkrsi
sl*g*rn*trdwiwfes*crcyigellake*kw*ss*rgwyhfr*i*kclkesfc*i*lw
frflfkikwylgihc*tf**ifstrf**r*stnattnstktttnstiksyisttinqid*
tkihsksr*f*l*f*nkfr**ksr*ngstkentiy*ksik*rvrii*ytisctnv*kn*n
ntikdcksigtnisie*ne*qrikvfni*sttttttiiki*iyw---

---yk*ekirnftfncw*c**dl*esk*ld*mfcc*flv*iffgi*y*rfs*kf*kifqc
s*islsittlfn*inlhq**tn*rtttll*ylflvikvicckswfitf**v*eyflsrey
wsrfiglsfilefiyrfkinsiikqttrsckck*ps*ffcftt*kirsmamvnlcftsys
rpiqsc*rrscqiidr*sctsyyirr*svpnykitysrdldr*s*smvlwlrl***yl*s
nrcslqvipihkdsryhffkywsklyhskeisftqrfth*igaslffylhleiwwfhlfr
icrylysiqrdtfstlqycrgnstyqilc*p*ryyh*nr*yli*yfknhsil*n*ky*rl
iqtisfiyv*sshh*sfsfkrst*kyckigfnk*fsfnfkffainsrl*i*kfrifnrsn
sryfikfnlsikkkink*klklilkfk

Frame C:
GYQCVPSIKELSKKTDKELSSVQGFTISRDGCGSIYFPGSTNLVALGLDDIVDIEPREVS
VYKDEETKPEIGYGLNRDAVVTLENCWPKNKNGEVVKEDGTILDKYENALKKVSAKSDCG
FVSYSRSNGTWVFTVKHFSKYSAPDFDEDDQQMQQQTQQKQQQTQPSKVTFQQPSTKLTK
PKFTANLDNFDSDSETSSGDENQDEMVPQKKTPFIKRVSNRESGLFDTPSVVPMSEKIET
TPSKIARVSEPTSQSSRMSNNALKFSTFNPQQQQLQSSRFKSTG---

---INEKRLEILHLIAGSVNKIYKNLNDWIRCFAVSFWFKYSLEYSIEDSVENFERSFNA
HRSVYPLPPYLIKSTSTNSKQIEEQQHYYDICFLLLKLFAVNRGSSHFDKFKNIFYPENI
GQDLLDYHLSWNLYTVLKSIPSLNKQPDLVNASNLHSSFALQLERLGLWQWSIYVLLHTP
DQSNHVREEAVKSLIARAAPVITSEDRVFLTTKLHIPEIWIDEAKAWYSGYDCNNDIYDQ
IDALFKSYQYTKIHDIIFSNIGPNYIIQKRYHSLKDLLIRLEPHSSFISTWRYGGSIFLE
FADICIQYKEILSQLSNTAEEIQRTKYYVNLKDITTRIVNILSDISKITQSSEIKNTSAS
YKQSLSFMSEALITKASLLRDLPESIVKLVSTNNLVSTLNSLPLTQDYRSKNLESLTDQI
QDTLLNSIYQ*kkk*inkn*n*f*nlk

Query= Contig-U11186-1 (Contig-U11186-1Q)
/CSM_Contig/Contig-U11186-1Q.Seq.d
         (2199 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U11186-1 (Contig-U11186-1Q) /CSM_Contig/Conti...  3207  0.0
Contig-U10723-1 (Contig-U10723-1Q) /CSM_Contig/Conti...    44  6e-04
Contig-U06537-1 (Contig-U06537-1Q) /CSM_Contig/Conti...    44  6e-04
Contig-U14822-1 (Contig-U14822-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U13230-1 (Contig-U13230-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U12562-1 (Contig-U12562-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U12547-1 (Contig-U12547-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U09724-1 (Contig-U09724-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U11911-1 (Contig-U11911-1Q) /CSM_Contig/Conti...    40  0.010
Contig-U11324-1 (Contig-U11324-1Q) /CSM_Contig/Conti...    40  0.010

>Contig-U11186-1 (Contig-U11186-1Q) /CSM_Contig/Contig-U11186-1Q.Seq.d
          Length = 2199

 Score = 3207 bits (1618), Expect = 0.0
 Identities = 1648/1648 (100%)
 Strand = Plus / Plus

                                                                        
Query: 499  catcaaaagttacatttcaacaaccatcaaccaaattgactaaaccaaaattcacagcaa 558
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499  catcaaaagttacatttcaacaaccatcaaccaaattgactaaaccaaaattcacagcaa 558

                                                                        
Query: 559  atctcgataattttgactctgattctgaaacaagttcaggtgatgaaaatcaagatgaaa 618
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559  atctcgataattttgactctgattctgaaacaagttcaggtgatgaaaatcaagatgaaa 618

                                                                        
Query: 619  tggttccacaaaagaaaacaccatttattaaaagagtatcaaatagagagtcaggattat 678
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619  tggttccacaaaagaaaacaccatttattaaaagagtatcaaatagagagtcaggattat 678

                                                                        
Query: 679  ttgatacaccatcagttgtaccaatgtctgaaaaaattgaaacaacaccatcaaagattg 738
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679  ttgatacaccatcagttgtaccaatgtctgaaaaaattgaaacaacaccatcaaagattg 738

                                                                        
Query: 739  caagagtatcggaaccaacatctcaatcgagtagaatgagtaacaacgcattaaagtttt 798
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739  caagagtatcggaaccaacatctcaatcgagtagaatgagtaacaacgcattaaagtttt 798

                                                                        
Query: 799  caacatttaatccacaacaacaacaactacaatcatcaagatttaaatctactggttnnn 858
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799  caacatttaatccacaacaacaacaactacaatcatcaagatttaaatctactggttnnn 858

                                                                        
Query: 859  nnnnnnnttataaatgagaaaagattagaaattttacatttaattgctggtagtgttaat 918
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859  nnnnnnnttataaatgagaaaagattagaaattttacatttaattgctggtagtgttaat 918

                                                                        
Query: 919  aagatttataagaatctaaatgattggattagatgttttgctgttagtttttggtttaaa 978
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919  aagatttataagaatctaaatgattggattagatgttttgctgttagtttttggtttaaa 978

                                                                        
Query: 979  tattctttggaatatagtattgaagattcagttgaaaattttgaaagatctttcaatgct 1038
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979  tattctttggaatatagtattgaagattcagttgaaaattttgaaagatctttcaatgct 1038

                                                                        
Query: 1039 catagatcagtttatccattaccaccttatttaattaaatcaacctccaccaatagtaaa 1098
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 catagatcagtttatccattaccaccttatttaattaaatcaacctccaccaatagtaaa 1098

                                                                        
Query: 1099 caaattgaagaacaacaacattattatgatatttgtttcttgttattaaagttatttgct 1158
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1099 caaattgaagaacaacaacattattatgatatttgtttcttgttattaaagttatttgct 1158

                                                                        
Query: 1159 gtaaatcgtggttcatcacattttgataagtttaagaatattttttatccagagaatatt 1218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1159 gtaaatcgtggttcatcacattttgataagtttaagaatattttttatccagagaatatt 1218

                                                                        
Query: 1219 ggtcaagatttattggattatcatttatcttggaatttatataccgttttaaaatcaatt 1278
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1219 ggtcaagatttattggattatcatttatcttggaatttatataccgttttaaaatcaatt 1278

                                                                        
Query: 1279 ccatcattaaacaaacaaccagatcttgtaaatgcaagtaaccttcatagttcttttgct 1338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1279 ccatcattaaacaaacaaccagatcttgtaaatgcaagtaaccttcatagttcttttgct 1338

                                                                        
Query: 1339 ttacaacttgaaagattaggtctatggcaatggtcaatctatgttttacttcatactcca 1398
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1339 ttacaacttgaaagattaggtctatggcaatggtcaatctatgttttacttcatactcca 1398

                                                                        
Query: 1399 gaccaatccaatcatgttagagaagaagctgtcaaatcattgatcgctagagctgcacca 1458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1399 gaccaatccaatcatgttagagaagaagctgtcaaatcattgatcgctagagctgcacca 1458

                                                                        
Query: 1459 gttattacatcagaagatagagtgttcctaactacaaaattacatattccagagatttgg 1518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1459 gttattacatcagaagatagagtgttcctaactacaaaattacatattccagagatttgg 1518

                                                                        
Query: 1519 atcgatgaagctaaagcatggtactctggttacgattgtaataatgatatttatgatcaa 1578
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1519 atcgatgaagctaaagcatggtactctggttacgattgtaataatgatatttatgatcaa 1578

                                                                        
Query: 1579 atcgatgctctcttcaagtcataccaatacacaaagattcacgatatcattttttcaaat 1638
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1579 atcgatgctctcttcaagtcataccaatacacaaagattcacgatatcattttttcaaat 1638

                                                                        
Query: 1639 attggtccaaactatatcattcaaaagagatatcattcactcaaagatttactcattaga 1698
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1639 attggtccaaactatatcattcaaaagagatatcattcactcaaagatttactcattaga 1698

                                                                        
Query: 1699 ttggagcctcactcttcttttatctccacttggagatatggtggttccatctttttagaa 1758
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1699 ttggagcctcactcttcttttatctccacttggagatatggtggttccatctttttagaa 1758

                                                                        
Query: 1759 tttgccgatatttgtattcaatacaaagagatactttctcaactctccaatactgcagag 1818
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1759 tttgccgatatttgtattcaatacaaagagatactttctcaactctccaatactgcagag 1818

                                                                        
Query: 1819 gaaattcaacgtaccaaatattatgttaaccttaaagatattaccactagaatcgttaat 1878
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1819 gaaattcaacgtaccaaatattatgttaaccttaaagatattaccactagaatcgttaat 1878

                                                                        
Query: 1879 atcttatctgatatttcaaaaatcactcaatcctctgaaattaaaaatactagcgcctca 1938
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1879 atcttatctgatatttcaaaaatcactcaatcctctgaaattaaaaatactagcgcctca 1938

                                                                        
Query: 1939 tacaaacaatctctttcatttatgtctgaagctctcatcactaaagcttctcttttaaga 1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1939 tacaaacaatctctttcatttatgtctgaagctctcatcactaaagcttctcttttaaga 1998

                                                                        
Query: 1999 gatctacctgaaagtattgtaaaattggtttcaacaaataatttagtttcaactttaaat 2058
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1999 gatctacctgaaagtattgtaaaattggtttcaacaaataatttagtttcaactttaaat 2058

                                                                        
Query: 2059 tctttgccattaactcaagattatagatctaaaaatttagaatctttaaccgatcaaatt 2118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2059 tctttgccattaactcaagattatagatctaaaaatttagaatctttaaccgatcaaatt 2118

                                        
Query: 2119 caagatactttattaaattcaatttatc 2146
            ||||||||||||||||||||||||||||
Sbjct: 2119 caagatactttattaaattcaatttatc 2146


 Score =  894 bits (451), Expect = 0.0
 Identities = 451/451 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggttatcaatgtgtcccatcaattaaagaattatcaaagaaaactgataaggaattat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atggttatcaatgtgtcccatcaattaaagaattatcaaagaaaactgataaggaattat 60

                                                                       
Query: 61  catcagttcaaggttttacaatttcaagagatggttgtggttcaatttatttccctggtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  catcagttcaaggttttacaatttcaagagatggttgtggttcaatttatttccctggtt 120

                                                                       
Query: 121 caacaaatttggttgcattaggtttagatgatatcgttgatattgaaccaagagaagtat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caacaaatttggttgcattaggtttagatgatatcgttgatattgaaccaagagaagtat 180

                                                                       
Query: 181 cagtttataaggatgaagaaactaaaccagagattggatatggtttgaatcgtgatgccg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagtttataaggatgaagaaactaaaccagagattggatatggtttgaatcgtgatgccg 240

                                                                       
Query: 241 ttgttacattggagaattgttggccaaagaataaaaatggtgaagtagttaaagaggatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgttacattggagaattgttggccaaagaataaaaatggtgaagtagttaaagaggatg 300

                                                                       
Query: 301 gtaccattttagataaatatgaaaatgccttaaagaaagtttctgctaaatctgattgtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtaccattttagataaatatgaaaatgccttaaagaaagtttctgctaaatctgattgtg 360

                                                                       
Query: 361 gtttcgtttcttattcaagatcaaatggtacttgggtattcactgttaaacattttagta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtttcgtttcttattcaagatcaaatggtacttgggtattcactgttaaacattttagta 420

                                          
Query: 421 aatattcagcaccagattttgatgaagatga 451
           |||||||||||||||||||||||||||||||
Sbjct: 421 aatattcagcaccagattttgatgaagatga 451


 Score = 32.2 bits (16), Expect = 2.4
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 1019 ttgaaagatctttcaa 1034
            ||||||||||||||||
Sbjct: 1034 ttgaaagatctttcaa 1019


>Contig-U10723-1 (Contig-U10723-1Q) /CSM_Contig/Contig-U10723-1Q.Seq.d
          Length = 1742

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 812  acaacaacaacaactacaatcatcaa 837
            |||||||||||||| |||||||||||
Sbjct: 1187 acaacaacaacaacaacaatcatcaa 1212


 Score = 34.2 bits (17), Expect = 0.62
 Identities = 23/25 (92%)
 Strand = Plus / Plus

                                     
Query: 806  taatccacaacaacaacaactacaa 830
            ||||| |||||||||||||| ||||
Sbjct: 1178 taatcaacaacaacaacaacaacaa 1202


>Contig-U06537-1 (Contig-U06537-1Q) /CSM_Contig/Contig-U06537-1Q.Seq.d
          Length = 530

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 812 acaacaacaacaactacaatcatcaa 837
           |||||||||||||| |||||||||||
Sbjct: 465 acaacaacaacaacaacaatcatcaa 490


 Score = 32.2 bits (16), Expect = 2.4
 Identities = 22/24 (91%)
 Strand = Plus / Plus

                                   
Query: 807 aatccacaacaacaacaactacaa 830
           |||| |||||||||||||| ||||
Sbjct: 448 aatcaacaacaacaacaacaacaa 471


 Score = 30.2 bits (15), Expect = 9.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                              
Query: 812 acaacaacaacaactacaa 830
           |||||||||||||| ||||
Sbjct: 456 acaacaacaacaacaacaa 474


 Score = 30.2 bits (15), Expect = 9.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                              
Query: 812 acaacaacaacaactacaa 830
           |||||||||||||| ||||
Sbjct: 459 acaacaacaacaacaacaa 477


 Score = 30.2 bits (15), Expect = 9.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                              
Query: 812 acaacaacaacaactacaa 830
           |||||||||||||| ||||
Sbjct: 462 acaacaacaacaacaacaa 480


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 38,301
Number of Sequences: 6905
Number of extensions: 38301
Number of successful extensions: 8699
Number of sequences better than 10.0: 950
length of query: 2199
length of database: 5,674,871
effective HSP length: 16
effective length of query: 2183
effective length of database: 5,564,391
effective search space: 12147065553
effective search space used: 12147065553
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U11186-1 (Contig-U11186-1Q) /CSM_Contig/Contig-U11186-1Q.Seq.d
         (2199 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ355331) Dictyostelium discoideum cDNA clone:dda56p09, 3' ...  1485   0.0    1
(BJ348385) Dictyostelium discoideum cDNA clone:dda33f05, 3' ...  1380   0.0    2
(BJ325829) Dictyostelium discoideum cDNA clone:dda2c16, 5' e...  1324   0.0    1
(BJ340523) Dictyostelium discoideum cDNA clone:dda2c16, 3' e...  1245   0.0    1
(BJ355822) Dictyostelium discoideum cDNA clone:dda58g09, 3' ...  1059   0.0    1
(BJ354871) Dictyostelium discoideum cDNA clone:dda55d02, 3' ...  1059   0.0    1
(BJ337677) Dictyostelium discoideum cDNA clone:dda58g09, 5' ...   638   0.0    2
(BJ330870) Dictyostelium discoideum cDNA clone:dda33f05, 5' ...   837   0.0    2
(BJ407960) Dictyostelium discoideum cDNA clone:dds44p04, 3' ...   989   0.0    1
(BJ337156) Dictyostelium discoideum cDNA clone:dda56p09, 5' ...   551   0.0    3
(BJ396862) Dictyostelium discoideum cDNA clone:dds44p04, 5' ...   710   0.0    3
(BJ336752) Dictyostelium discoideum cDNA clone:dda55d02, 5' ...   896   0.0    1
(C94041) Dictyostelium discoideum slug cDNA, clone SSG317.        773   0.0    1
(BJ351862) Dictyostelium discoideum cDNA clone:dda44h24, 3' ...   486   e-132  1
(AU073177) Dictyostelium discoideum slug cDNA, clone SSG317.      468   e-127  1
(AC173356) Strongylocentrotus purpuratus clone R3-64G2, WORK...    42   0.008  7
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet...    40   0.020  22
(AE017263) Mesoplasma florum L1 complete genome.                   42   0.072  23
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    36   0.094  14
(EA738139) Sequence 9585 from patent US 7368527.                   46   0.11   3
(CU463066) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    50   0.36   1
(DN361352) LIB3628-007-Q1-K1-D3 LIB3628 Canis lupus familiar...    50   0.36   1
(CX992321) DOG_EST_P117C02 Canis familiaris testis cDNA Cani...    50   0.36   1
(BP145986) Sus scrofa mRNA, clone:OVRM10098A11, 5' end, expr...    50   0.36   1
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-...    34   0.41   15
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    36   0.68   20
(AC008250) Homo sapiens 12 BAC RP11-729I10 (Roswell Park Can...    36   0.74   9
(BM881809) rb14c03.y1 Meloidogyne incognita egg pAMP1 Bird M...    34   0.86   4
(CP000726) Clostridium botulinum A str. ATCC 19397, complete...    46   0.86   23
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701...    32   1.0    15
(BA000016) Clostridium perfringens str. 13 DNA, complete gen...    48   1.0    23
(CP000246) Clostridium perfringens ATCC 13124, complete genome.    38   1.2    23
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2...    42   1.3    11
(CP000727) Clostridium botulinum A str. Hall, complete genome.     46   1.4    23
(AC202325) Medicago truncatula clone mth2-165f20, WORKING DR...    48   1.4    1
(AC164146) Bos taurus clone CH240-139M16, WORKING DRAFT SEQU...    48   1.4    1
(FD435657) Atr02b_18_F02_C011.g1 FGP Female Amborella tricho...    48   1.4    1
(FD435590) Atr02b_17_F02_C011.b1 FGP Female Amborella tricho...    48   1.4    1
(CP000312) Clostridium perfringens SM101, complete genome.         48   1.4    1
(DE587925) Bombyx mori genomic DNA, Fosmid clone:GBMFno240_k...    38   1.5    2
(AL844556) Mouse DNA sequence from clone RP23-21N12 on chrom...    40   1.5    8
(DE627207) Bombyx mori genomic DNA, Fosmid clone:GBMFno369_i...    46   1.6    2
(AM446066) Vitis vinifera contig VV78X147582.13, whole genom...    46   1.7    2
(AL078623) Human DNA sequence from clone RP5-1069C8 on chrom...    40   1.7    7
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g...    46   2.2    23
(DE145303) Bombyx mori genomic DNA, Fosmid clone:RO0283-N16_R.     38   2.3    2
(U42597) Dictyostelium discoideum histidine kinase A (dhkA) ...    36   2.4    3
(EH270438) Gp_mxAB_11F07_M13R mxA Gammarus pulex cDNA clone ...    44   2.4    2
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074...    38   2.4    15
(AC162929) Mus musculus chromosome 9 clone RP23-222I13, WORK...    34   2.7    2
(CT098595) Sus scrofa genomic clone PigE-194K24, genomic sur...    38   2.7    2
(CT025680) Mouse DNA sequence from clone RP24-84H10 on chrom...    34   2.8    2
(DU934102) 360765 Tomato EcoRI BAC Library Solanum lycopersi...    42   2.8    2
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-...    42   2.9    6
(CP000673) Clostridium kluyveri DSM 555, complete genome.          34   2.9    23
(U78045) Human collagenase and stromelysin genes, complete c...    36   3.0    5
(AC007881) Homo sapiens BAC clone RP11-467P9 from 2, complet...    46   3.1    5
(CC237501) CH261-75C23_Sp6.1 CH261 Gallus gallus genomic clo...    38   3.3    2
(AC046184) Homo sapiens chromosome 15 clone CTD-2014F9 map 1...    34   3.3    7
(AC116919) Dictyostelium discoideum chromosome 2 map complem...    36   3.6    6
(EJ610170) 1092962038130 Global-Ocean-Sampling_GS-29-01-01-1...    34   3.7    2
(CT786331) Paramecium tetraurelia 5-PRIME EST from clone LK0...    32   3.7    2
(AE015927) Clostridium tetani E88, complete genome.                44   3.8    21
(AC083821) Homo sapiens chromosome 9 clone RP11-174I23 map 9...    34   3.9    9
(CU464141) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   4.2    8
(CQ655070) Sequence 12027 from Patent WO0234771.                   36   4.5    11
(AC180588) Strongylocentrotus purpuratus clone R3-3094H12, W...    42   5.4    7
(AC183978) Gallus gallus BAC clone CH261-123P11 from chromos...    46   5.7    1
(AC131678) Mus musculus BAC clone RP23-333L1 from chromosome...    46   5.7    1
(AC103604) Mus musculus chromosome 3, clone RP23-95A20, comp...    46   5.7    1
(AC198162) MACACA MULATTA BAC clone CH250-156D21 from chromo...    46   5.7    1
(AM471020) Vitis vinifera contig VV78X052777.21, whole genom...    46   5.7    1
(AC214592) Populus trichocarpa clone POP002-I03, complete se...    46   5.7    1
(EA058165) Sequence 165 from patent US 7166573.                    46   5.7    1
(EA058069) Sequence 69 from patent US 7166573.                     46   5.7    1
(DJ032298) BIOMARKERS OF CYCLIN-DEPENDENT KINASE MODULATION.       46   5.7    1
(CS351080) Sequence 464 from Patent WO2006013561.                  46   5.7    1
(CQ729802) Sequence 15736 from Patent WO02068579.                  46   5.7    1
(CQ512656) Sequence 44523 from Patent WO0160860.                   46   5.7    1
(CQ503850) Sequence 35717 from Patent WO0160860.                   46   5.7    1
(CQ497451) Sequence 29318 from Patent WO0160860.                   46   5.7    1
(CQ491565) Sequence 23432 from Patent WO0160860.                   46   5.7    1
(CQ482745) Sequence 14612 from Patent WO0160860.                   46   5.7    1
(CQ473576) Sequence 5443 from Patent WO0160860.                    46   5.7    1
(CQ341626) Sequence 15720 from Patent WO0157275.                   46   5.7    1
(CQ328860) Sequence 2954 from Patent WO0157275.                    46   5.7    1
(CQ304358) Sequence 15463 from Patent WO0186003.                   46   5.7    1
(CQ291803) Sequence 2908 from Patent WO0186003.                    46   5.7    1
(CQ205798) Sequence 8075 from Patent WO0157271.                    46   5.7    1
(CQ200644) Sequence 2921 from Patent WO0157271.                    46   5.7    1
(CQ146002) Sequence 16024 from Patent WO0157276.                   46   5.7    1
(CQ132944) Sequence 2966 from Patent WO0157276.                    46   5.7    1
(CQ076345) Sequence 12145 from Patent WO0157278.                   46   5.7    1
(CQ067107) Sequence 2907 from Patent WO0157278.                    46   5.7    1
(CQ057082) Sequence 7902 from Patent WO0157270.                    46   5.7    1
(CQ052063) Sequence 2883 from Patent WO0157270.                    46   5.7    1
(BD345387) BREAST, GASTRIC, AND PROSTATE CANCER ASSOCIATED A...    46   5.7    1
(BD345291) BREAST, GASTRIC, AND PROSTATE CANCER ASSOCIATED A...    46   5.7    1
(AX053399) Sequence 165 from Patent WO0073801.                     46   5.7    1
(AX053303) Sequence 69 from Patent WO0073801.                      46   5.7    1

>(BJ355331) Dictyostelium discoideum cDNA clone:dda56p09, 3' end,
            single read.
          Length = 756

 Score = 1485 bits (749), Expect = 0.0
 Identities = 754/756 (99%)
 Strand = Plus / Minus


Query: 1383 tttacttcatactccagaccaatccaatcatgttagagaagaagctgtcaaatcattgat 1442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756  tttacttcatactccagaccaatccaatcatgttagagaagaagctgtcaaatcattgat 697


Query: 1443 cgctagagctgcaccagttattacatcagaagatagagtgttcctaactacaaaattaca 1502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696  cgctagagctgcaccagttattacatcagaagatagagtgttcctaactacaaaattaca 637


Query: 1503 tattccagagatttggatcgatgaagctaaagcatggtactctggttacgattgtaataa 1562
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636  tattccagagatttggatcgatgaagctaaagcatggtactctggttacgattgtaataa 577


Query: 1563 tgatatttatgatcaaatcgatgctctcttcaagtcataccaatacacaaagattcacga 1622
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576  tgatatttatgatcaaatcgatgctctcttcaagtcataccaatacacaaagattcacga 517


Query: 1623 tatcattttttcaaatattggtccaaactatatcattcaaaagagatatcattcactcaa 1682
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516  tatcattttctcaaatattggtccaaactatatcattcaaaagagatatcattcactcaa 457


Query: 1683 agatttactcattagattggagcctcactcttcttttatctccacttggagatatggtgg 1742
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456  agatttactcattagattggagcctcactcttcttttatctccacttggagatatggtgg 397


Query: 1743 ttccatctttttagaatttgccgatatttgtattcaatacaaagagatactttctcaact 1802
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396  ttccatctttttagaatttgccgatatttgtattcaatacaaagagatactttctcaact 337


Query: 1803 ctccaatactgcagaggaaattcaacgtaccaaatattatgttaaccttaaagatattac 1862
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336  ctccaatactgcagaggaaattcaacgtaccaaatattatgttaaccttaaagatattac 277


Query: 1863 cactagaatcgttaatatcttatctgatatttcaaaaatcactcaatcctctgaaattaa 1922
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276  cactagaatcgttaatatcttatctgatatttcaaaaatcactcaatcctctgaaattaa 217


Query: 1923 aaatactagcgcctcatacaaacaatctctttcatttatgtctgaagctctcatcactaa 1982
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216  aaatactagcgcctcatacaaacaatctctttcatttatgtctgaagctctcatcactaa 157


Query: 1983 agcttctcttttaagagatctacctgaaagtattgtaaaattggtttcaacaaataattt 2042
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156  agcttctcttttaagagatctacctgaaagtattgtaaaattggtttcaacaaataattt 97


Query: 2043 agtttcaactttaaattctttgccattaactcaagattatagatctaaaaatttagaatc 2102
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96   agtttcaactttaaattctttgccattaactcaagattatagatctaaaaatttagaatc 37


Query: 2103 tttaaccgatcaaattcaagatactttattaaattc 2138
            |||||| |||||||||||||||||||||||||||||
Sbjct: 36   tttaacngatcaaattcaagatactttattaaattc 1

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,639,660,496
Number of extensions: 162114429
Number of successful extensions: 15013550
Number of sequences better than 10.0: 204
Length of query: 2199
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 2175
Effective length of database: 97,308,875,965
Effective search space: 211646805223875
Effective search space used: 211646805223875
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

Query= Contig-U11186-1 (Contig-U11186-1Q) /CSM_Contig/Contig-U11186-1Q.Seq.d
         (2199 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54EQ8) RecName: Full=Nuclear pore complex protein Nup98-Nup96;...   855   0.0
BT007349_1(BT007349|pid:none) Homo sapiens nucleoporin 98kDa mRN...   148   9e-34
AF231130_1(AF231130|pid:none) Homo sapiens NUP196 nucleoporin mR...   148   9e-34
BC012906_1(BC012906|pid:none) Homo sapiens nucleoporin 98kDa, mR...   148   9e-34
AL133601_1(AL133601|pid:none) Homo sapiens mRNA; cDNA DKFZp434A2...   148   9e-34
AY250771_1(AY250771|pid:none) Drosophila melanogaster strain Zim...   141   9e-32
AY250800_1(AY250800|pid:none) Drosophila yakuba strain 115 nucle...   141   9e-32
(Q9Y6J4) RecName: Full=Nuclear pore complex protein Nup98-Nup96;...   140   3e-31
AF071076_1(AF071076|pid:none) Homo sapiens cell-line HeLa Nup98-...   139   3e-31
AY250769_1(AY250769|pid:none) Drosophila melanogaster strain Zim...   139   3e-31
AY250774_1(AY250774|pid:none) Drosophila melanogaster strain Zim...   139   3e-31
AE014297_3526(AE014297|pid:none) Drosophila melanogaster chromos...   139   3e-31
AY250770_1(AY250770|pid:none) Drosophila melanogaster strain Zim...   139   3e-31
BC167499_1(BC167499|pid:none) Xenopus laevis hypothetical protei...   139   4e-31
BC078630_1(BC078630|pid:none) Mus musculus nucleoporin 98, mRNA ...   137   1e-30
AY250799_1(AY250799|pid:none) Drosophila simulans strain Lhr nuc...   137   1e-30
AY250797_1(AY250797|pid:none) Drosophila simulans strain Zimbabw...   137   2e-30
AY250792_1(AY250792|pid:none) Drosophila simulans strain Zimbabw...   137   2e-30
AY250791_1(AY250791|pid:none) Drosophila simulans strain Zimbabw...   137   2e-30
AY250788_1(AY250788|pid:none) Drosophila simulans strain Zimbabw...   136   3e-30
AY250784_1(AY250784|pid:none) Drosophila simulans strain Zimbabw...   136   4e-30
AY250789_1(AY250789|pid:none) Drosophila simulans strain Zimbabw...   136   4e-30
AY250787_1(AY250787|pid:none) Drosophila simulans strain Zimbabw...   135   6e-30
BC050911_1(BC050911|pid:none) Mus musculus nucleoporin 98, mRNA ...   134   2e-29
BC137975_1(BC137975|pid:none) Mus musculus nucleoporin 98, mRNA ...   134   2e-29
BC145071_1(BC145071|pid:none) Mus musculus nucleoporin 98, mRNA ...   134   2e-29
AY250768_1(AY250768|pid:none) Drosophila mauritiana strain 6 nuc...   132   4e-29
BC041136_1(BC041136|pid:none) Homo sapiens nucleoporin 98kDa, mR...   128   8e-28
U41815_1(U41815|pid:none) Human nucleoporin 98 (NUP98) mRNA, com...   128   8e-28
AK301512_1(AK301512|pid:none) Homo sapiens cDNA FLJ53414 complet...   128   8e-28
AK146491_1(AK146491|pid:none) Mus musculus 17 days embryo heart ...   128   8e-28
AK164402_1(AK164402|pid:none) Mus musculus 12 days embryo eyebal...   128   8e-28
AB040538_1(AB040538|pid:none) Homo sapiens NUP98 mRNA for nucleo...   128   8e-28
AC126012_3(AC126012|pid:none) Medicago truncatula clone mth2-27p...   118   8e-25
FN357349_8(FN357349|pid:none) Schistosoma mansoni genome sequenc...   117   1e-24
AP008209_474(AP008209|pid:none) Oryza sativa (japonica cultivar-...   112   4e-23
CR940353_669(CR940353|pid:none) Theileria annulata strain Ankara...   108   8e-22
AC009317_23(AC009317|pid:none) Genomic sequence for Arabidopsis ...   106   3e-21
(Q9UTK4) RecName: Full=Nucleoporin nup189; AltName: Full=Nuclear...   105   5e-21
AP008218_337(AP008218|pid:none) Oryza sativa (japonica cultivar-...   104   1e-20
D89145_1(D89145|pid:none) Schizosaccharomyces pombe mRNA, partia...   103   3e-20
BT068449_1(BT068449|pid:none) Zea mays full-length cDNA clone ZM...   102   4e-20
BT062198_1(BT062198|pid:none) Zea mays full-length cDNA clone ZM...   102   4e-20
AP008218_336(AP008218|pid:none) Oryza sativa (japonica cultivar-...   102   6e-20
AY223678_1(AY223678|pid:none) Emericella nidulans SONB gene, com...   102   8e-20
AB326233_1(AB326233|pid:none) Daucus carota FEN1 mRNA for nucleo...   101   1e-19
AP007155_966(AP007155|pid:none) Aspergillus oryzae RIB40 genomic...    99   5e-19
AK226964_1(AK226964|pid:none) Arabidopsis thaliana mRNA for hypo...    98   1e-18
AM270079_5(AM270079|pid:none) Aspergillus niger contig An04c0180...    96   4e-18
AE016819_175(AE016819|pid:none) Ashbya gossypii (= Eremothecium ...    96   5e-18
(P49687) RecName: Full=Nucleoporin NUP145;          EC=3.4.21.-;...    95   1e-17
BT054230_1(BT054230|pid:none) Zea mays full-length cDNA clone ZM...    92   6e-17
AF411839_1(AF411839|pid:none) Arabidopsis thaliana putative nucl...    92   1e-16
U50193_3(U50193|pid:none) Caenorhabditis elegans cosmid ZK328, c...    89   5e-16
U50193_4(U50193|pid:none) Caenorhabditis elegans cosmid ZK328, c...    89   5e-16
T29008(T29008)hypothetical protein ZK328.5b - Caenorhabditis ele...    89   5e-16
T29009(T29009)hypothetical protein ZK328.5a - Caenorhabditis ele...    89   5e-16
CU928179_330(CU928179|pid:none) Zygosaccharomyces rouxii strain ...    89   9e-16
AY181249_4(AY181249|pid:none) Candida glabrata mating pheromone ...    86   4e-15
AK105445_1(AK105445|pid:none) Oryza sativa Japonica Group cDNA c...    85   1e-14
BX897677_4(BX897677|pid:none) Neurospora crassa DNA linkage grou...    83   5e-14
AC011713_4(AC011713|pid:none) Arabidopsis thaliana chromosome 1 ...    82   8e-14
CR382135_635(CR382135|pid:none) Debaryomyces hansenii strain CBS...    76   6e-12
FN392319_540(FN392319|pid:none) Pichia pastoris GS115 chromosome...    74   2e-11
FM992691_457(FM992691|pid:none) Candida dubliniensis CD36 chromo...    72   8e-11
FM992690_603(FM992690|pid:none) Candida dubliniensis CD36 chromo...    72   1e-10
CU928166_162(CU928166|pid:none) Kluyveromyces thermotolerans str...    68   2e-09
CP000496_815(CP000496|pid:none) Pichia stipitis CBS 6054 chromos...    67   4e-09
CR380952_250(CR380952|pid:none) Candida glabrata strain CBS138 c...    65   1e-08
AF116074_1(AF116074|pid:none) Homo sapiens ADIR2 (ADIR2) mRNA, c...    64   2e-08
CR382132_1173(CR382132|pid:none) Yarrowia lipolytica strain CLIB...    63   4e-08
CR548612_3(CR548612|pid:none) Paramecium tetraurelia macronuclea...    59   7e-07
CP000581_385(CP000581|pid:none) Ostreococcus lucimarinus CCE9901...    58   1e-06
CP000591_81(CP000591|pid:none) Ostreococcus lucimarinus CCE9901 ...    57   3e-06
(Q02629) RecName: Full=Nucleoporin NUP100/NSP100; AltName: Full=...    57   4e-06
CU928178_19(CU928178|pid:none) Zygosaccharomyces rouxii strain C...    56   5e-06
U43279_1(U43279|pid:none) Human nucleoporin nup 36 mRNA, complet...    56   6e-06
FN357349_9(FN357349|pid:none) Schistosoma mansoni genome sequenc...    56   6e-06
CR382126_1138(CR382126|pid:none) Kluyveromyces lactis strain NRR...    55   1e-05
Z15036_1(Z15036|pid:none) S.cerevisiae gene for nuclear pore com...    52   7e-05
AY915341_1(AY915341|pid:none) Schistosoma japonicum SJCHGC05114 ...    52   7e-05
CP000852_295(CP000852|pid:none) Caldivirga maquilingensis IC-167...    44   0.032
AE014075_2328(AE014075|pid:none) Escherichia coli CFT073, comple...    42   0.071
(P43047) RecName: Full=Uncharacterized protein MCAP_0864; AltNam...    40   0.35
AM494964_47(AM494964|pid:none) Leishmania braziliensis chromosom...    39   0.60
CP000123_228(CP000123|pid:none) Mycoplasma capricolum subsp. cap...    39   0.60
AL157389_1(AL157389|pid:none) Human DNA sequence from clone RP11...    39   0.79
AE017198_1504(AE017198|pid:none) Lactobacillus johnsonii NCC 533...    39   0.79
U69668_1(U69668|pid:none) Human nuclear pore complex-associated ...    39   0.79
(Q9H3R8) RecName: Full=M-phase phosphoprotein 1;          Short=...    39   0.79
AB168847_1(AB168847|pid:none) Macaca fascicularis testis cDNA, c...    39   0.79
CP000079_38(CP000079|pid:none) Leishmania major strain Friedlin ...    38   1.3
AP009049_1515(AP009049|pid:none) Clostridium kluyveri NBRC 12016...    38   1.8
BC123811_1(BC123811|pid:none) Bos taurus serpin peptidase inhibi...    37   2.3
AC116979_37(AC116979|pid:none) Dictyostelium discoideum chromoso...    32   2.7
AC024824_1(AC024824|pid:none) Caenorhabditis elegans cosmid Y55B...    37   3.0
AB033337_1(AB033337|pid:none) Homo sapiens KRMP1 mRNA for mitoti...    37   3.0
A36898(A36898) maspin - human  &U04313_1(U04313|pid:none)              37   3.9
AE017143_100(AE017143|pid:none) Haemophilus ducreyi strain 35000...    37   3.9
FJ227128_106(FJ227128|pid:none) Euproctis pseudoconspersa nucleo...    37   3.9
CR854925_2(CR854925|pid:none) Zebrafish DNA sequence from clone ...    36   5.1
CP000046_1096(CP000046|pid:none) Staphylococcus aureus subsp. au...    36   5.1
BA000028_173(BA000028|pid:none) Oceanobacillus iheyensis HTE831 ...    36   5.1
AK312765_1(AK312765|pid:none) Homo sapiens cDNA, FLJ93175, highl...    36   5.1
AP009324_1107(AP009324|pid:none) Staphylococcus aureus subsp. au...    36   5.1
BC020713_1(BC020713|pid:none) Homo sapiens serpin peptidase inhi...    36   5.1
BA000033_997(BA000033|pid:none) Staphylococcus aureus subsp. aur...    36   5.1
AJ938182_979(AJ938182|pid:none) Staphylococcus aureus RF122 comp...    36   5.1
(P36952) RecName: Full=Serpin B5; AltName: Full=Protease inhibit...    36   5.1
(A6QG30) RecName: Full=Iron-regulated surface determinant protei...    36   6.7
(Q6GA86) RecName: Full=Iron-regulated surface determinant protei...    36   6.7
FJ952341_1(FJ952341|pid:none) Platymantis sp. MIS-2009 isolate B...    36   6.7
CR382126_97(CR382126|pid:none) Kluyveromyces lactis strain NRRL ...    36   6.7
(Q2H922) RecName: Full=Actin cytoskeleton-regulatory complex pro...    35   8.7
AL590442_46(AL590442|pid:none) chromosome II of strain GB-M1 of ...    35   8.7
CP000847_855(CP000847|pid:none) Rickettsia akari str. Hartford, ...    35   8.7
(Q2EEX7) RecName: Full=Cell division protease ftsH homolog;  &DQ...    35   8.7
FN392680_1(FN392680|pid:none) Sus scrofa partial mRNA for ST6 be...    35   8.7
AF326995_1(AF326995|pid:none) Chlamydia trachomatis strain UW-1 ...    35   8.7

>(Q54EQ8) RecName: Full=Nuclear pore complex protein Nup98-Nup96;
            Contains:   RecName: Full=Nuclear pore complex protein
            Nup98;   AltName: Full=Nucleoporin Nup98; Contains:
            RecName: Full=Nuclear pore complex protein Nup96;
            AltName: Full=Nucleoporin Nup96; Flags: Precursor;
          Length = 2053

 Score =  855 bits (2209), Expect = 0.0
 Identities = 427/427 (100%), Positives = 427/427 (100%)
 Frame = +1

Query: 868  INEKRLEILHLIAGSVNKIYKNLNDWIRCFAVSFWFKYSLEYSIEDSVENFERSFNAHRS 1047
            INEKRLEILHLIAGSVNKIYKNLNDWIRCFAVSFWFKYSLEYSIEDSVENFERSFNAHRS
Sbjct: 1627 INEKRLEILHLIAGSVNKIYKNLNDWIRCFAVSFWFKYSLEYSIEDSVENFERSFNAHRS 1686

Query: 1048 VYPLPPYLIKSTSTNSKQIEEQQHYYDICFLLLKLFAVNRGSSHFDKFKNIFYPENIGQD 1227
            VYPLPPYLIKSTSTNSKQIEEQQHYYDICFLLLKLFAVNRGSSHFDKFKNIFYPENIGQD
Sbjct: 1687 VYPLPPYLIKSTSTNSKQIEEQQHYYDICFLLLKLFAVNRGSSHFDKFKNIFYPENIGQD 1746

Query: 1228 LLDYHLSWNLYTVLKSIPSLNKQPDLVNASNLHSSFALQLERLGLWQWSIYVLLHTPDQS 1407
            LLDYHLSWNLYTVLKSIPSLNKQPDLVNASNLHSSFALQLERLGLWQWSIYVLLHTPDQS
Sbjct: 1747 LLDYHLSWNLYTVLKSIPSLNKQPDLVNASNLHSSFALQLERLGLWQWSIYVLLHTPDQS 1806

Query: 1408 NHVREEAVKSLIARAAPVITSEDRVFLTTKLHIPEIWIDEAKAWYSGYDCNNDIYDQIDA 1587
            NHVREEAVKSLIARAAPVITSEDRVFLTTKLHIPEIWIDEAKAWYSGYDCNNDIYDQIDA
Sbjct: 1807 NHVREEAVKSLIARAAPVITSEDRVFLTTKLHIPEIWIDEAKAWYSGYDCNNDIYDQIDA 1866

Query: 1588 LFKSYQYTKIHDIIFSNIGPNYIIQKRYHSLKDLLIRLEPHSSFISTWRYGGSIFLEFAD 1767
            LFKSYQYTKIHDIIFSNIGPNYIIQKRYHSLKDLLIRLEPHSSFISTWRYGGSIFLEFAD
Sbjct: 1867 LFKSYQYTKIHDIIFSNIGPNYIIQKRYHSLKDLLIRLEPHSSFISTWRYGGSIFLEFAD 1926

Query: 1768 ICIQYKEILSQLSNTAEEIQRTKYYVNLKDITTRIVNILSDISKITQSSEIKNTSASYKQ 1947
            ICIQYKEILSQLSNTAEEIQRTKYYVNLKDITTRIVNILSDISKITQSSEIKNTSASYKQ
Sbjct: 1927 ICIQYKEILSQLSNTAEEIQRTKYYVNLKDITTRIVNILSDISKITQSSEIKNTSASYKQ 1986

Query: 1948 SLSFMSEALITKASLLRDLPESIVKLVSTNNLVSTLNSLPLTQDYRSKNLESLTDQIQDT 2127
            SLSFMSEALITKASLLRDLPESIVKLVSTNNLVSTLNSLPLTQDYRSKNLESLTDQIQDT
Sbjct: 1987 SLSFMSEALITKASLLRDLPESIVKLVSTNNLVSTLNSLPLTQDYRSKNLESLTDQIQDT 2046

Query: 2128 LLNSIYQ 2148
            LLNSIYQ
Sbjct: 2047 LLNSIYQ 2053

 Score =  534 bits (1376), Expect = e-150
 Identities = 268/284 (94%), Positives = 268/284 (94%)
 Frame = +3

Query: 3    GYQCVPSIKELSKKTDKELSSVQGFTISRDGCGSIYFPGSTNLVALGLDDIVDIEPREVS 182
            GYQCVPSIKELSKKTDKELSSVQGFTISRDGCGSIYFPGSTNLVAL LDDIVDIEPREVS
Sbjct: 1027 GYQCVPSIKELSKKTDKELSSVQGFTISRDGCGSIYFPGSTNLVALDLDDIVDIEPREVS 1086

Query: 183  VYKDEETKPEIGYGLNRDAVVTLENCWPKNKNGEVVKEDGTILDKYENALKKVSAKSDCG 362
            VYKDEETKPEIGYGLNRDAVVTLENCWPKNKNGEVVKEDGTILDKYENALKKVSAKSDCG
Sbjct: 1087 VYKDEETKPEIGYGLNRDAVVTLENCWPKNKNGEVVKEDGTILDKYENALKKVSAKSDCG 1146

Query: 363  FVSYSRSNGTWVFTVKHFSKYSAPDFDEDDXXXXXXXXXXXXXXXPSKVTFQQPSTKLTK 542
            FVSYSRSNGTWVFTVKHFSKYSAPDFDEDD               PSKVTFQQPSTKLTK
Sbjct: 1147 FVSYSRSNGTWVFTVKHFSKYSAPDFDEDDQQMQQQTQQKQQQTQPSKVTFQQPSTKLTK 1206

Query: 543  PKFTANLDNFDSDSETSSGDENQDEMVPQKKTPFIKRVSNRESGLFDTPSVVPMSEKIET 722
            PKFTANLDNFDSDSETSSGDENQDEMVPQKKTPFIKRVSNRESGLFDTPSVVPMSEKIET
Sbjct: 1207 PKFTANLDNFDSDSETSSGDENQDEMVPQKKTPFIKRVSNRESGLFDTPSVVPMSEKIET 1266

Query: 723  TPSKIARVSEPTSQSSRMSNNALKFSTFNPQQQQLQSSRFKSTG 854
            TPSKIARVSEPTSQSSRMSNNALKFSTFNPQQQQLQSSRFKSTG
Sbjct: 1267 TPSKIARVSEPTSQSSRMSNNALKFSTFNPQQQQLQSSRFKSTG 1310

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 3,123,249,943
Number of extensions: 59766882
Number of successful extensions: 195982
Number of sequences better than 10.0: 119
Number of HSP's gapped: 195491
Number of HSP's successfully gapped: 143
Length of query: 733
Length of database: 1,040,966,779
Length adjustment: 136
Effective length of query: 597
Effective length of database: 605,184,019
Effective search space: 361294859343
Effective search space used: 361294859343
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.35  gvh: 0.35  alm: 0.44  top: 0.53  tms: 0.00  mit: 0.19  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: nuclear
	 36.0 %: cytoplasmic
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system

>> prediction for Contig-U11186-1 is nuc